m6A-centered Disease Response Information
General Information of the Disease (ID: M6ADIS0054)
| Name |
Nasopharyngeal carcinoma
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|---|---|---|---|---|---|
| ICD |
ICD-11: 2B6B
|
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Full List of Target Gene(s) of This m6A-centered Disease Response
40S ribosomal protein S6 (S6)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
| Response Summary | YTHDC2 promotes radiotherapy resistance of NPC cells by activating the IGF1R/ATK/40S ribosomal protein S6 (S6) signaling axis and serves as a potential therapeutic target in radiosensitization of NPC cells. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | YTH domain-containing protein 2 (YTHDC2) | READER | ||
| Target Regulation | Up regulation | |||
| In-vitro Model | HK1-IRR (HK1-IRR (HK1-ionizing radiation radioresistent cell line) was derived from HK1 after a prolonged exposure of irradiation.HK1, a generous gift from Prof. Ya Cao (Cancer Research Institute, Central South University), was established from a recurrent nasopharynx carcinoma of a Chinese 17-year-old male patient) | |||
| NPC/HK1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7084 | |
| CNE2-IRR (CNE2-IRR (CNE2-ionizing radiation radioresistent cell line) was derived from CNE2 after a prolonged exposure of irradiation) | ||||
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | 2 × 106 cells resuspended in 50 uL of Matrigel (Corning) were subcutaneously injected into 4-6 weeks old male nude mice. When tumor volumes reached 150-200 mm3, animals were divided into control group and radiotherapy group. In the radiotherapy group, tumors were treated with a single irradiation (4 Gy) when tumor volumes reached approximately 150-200 mm3. The tumor stopped growing in the next few days and then restarted growth. | |||
ATP-binding cassette sub-family C member 9 (ABCC9)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
| Response Summary | TRIM11 regulates nasopharyngeal carcinoma drug resistance by positively modulating the Daple/beta-catenin/ATP-binding cassette sub-family C member 9 (ABCC9) signaling pathway. TRIM11 enhanced the multidrug resistance in NPC by inhibiting apoptosis in vitro and promoting cisplatin (DDP) resistance in vivo. METTL3-mediated m6A modification caused the upregulation of TRIM11 via IGF2BP2 in NPC drug-resistant cells. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Responsed Drug | Cisplatin | Approved | ||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Pathway Response | ABC transporters | hsa02010 | ||
| Wnt signaling pathway | hsa04310 | |||
| Ubiquitin mediated proteolysis | hsa04120 | |||
| Cell Process | Ubiquitination degradation | |||
| In-vitro Model | CNE-1 | Normal | Homo sapiens | CVCL_6888 |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | A total of 2 × 106 cells was mixed with 0.2 ml PBS (pH 7.4) and 30% (v/v) Matrigel matrix (BD Biosciences). | |||
Cadherin-2 (CDH2/N-cadherin)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
| Response Summary | METTL3 activated the luciferase activity of TOPflash (a reporter for beta-catenin/TCF signaling), and downregulation of METTL3 inhibited the expression of beta-catenin/TCF target genes vimentin and Cadherin-2 (CDH2/N-cadherin), which are two regulators of epithelial-mesenchymal transition. METTL3 silencing decreased the m6A methylation and total mRNA levels of Tankyrase, a negative regulator of axin. METTL3 is a therapeutic target for NPC. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | Wnt signaling pathway | hsa04310 | ||
| Cell Process | Epithelial-mesenchymal transition | |||
| In-vitro Model | Neural progenitor cells (NPCs) (The progenitor cells of the CNS) | |||
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| HNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_FA07 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| In-vivo Model | 1 × 105 HNE2 cells (with or without METTL3 knockdown) were labeled with luciferase gene and injected into the tail vein of the nude mice. | |||
Catenin beta-1 (CTNNB1/Beta-catenin)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
| Response Summary | METTL3 activated the luciferase activity of TOPflash (a reporter for beta-catenin/TCF signaling), and downregulation of METTL3 inhibited the expression of Catenin beta-1 (CTNNB1/Beta-catenin)/TCF target genes vimentin and N-cadherin, which are two regulators of epithelial-mesenchymal transition. METTL3 silencing decreased the m6A methylation and total mRNA levels of Tankyrase, a negative regulator of axin. METTL3 is a therapeutic target for NPC. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | Wnt signaling pathway | hsa04310 | ||
| Cell Process | Epithelial-mesenchymal transition | |||
| In-vitro Model | Neural progenitor cells (NPCs) (The progenitor cells of the CNS) | |||
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| HNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_FA07 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| In-vivo Model | 1 × 105 HNE2 cells (with or without METTL3 knockdown) were labeled with luciferase gene and injected into the tail vein of the nude mice. | |||
E3 ubiquitin-protein ligase TRIM11 (TRIM11)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
| Response Summary | TRIM11 regulates nasopharyngeal carcinoma drug resistance by positively modulating the Daple/beta-catenin/E3 ubiquitin-protein ligase TRIM11 (TRIM11) signaling pathway. TRIM11 enhanced the multidrug resistance in NPC by inhibiting apoptosis in vitro and promoting cisplatin (DDP) resistance in vivo. METTL3-mediated m6A modification caused the upregulation of TRIM11 via IGF2BP2 in NPC drug-resistant cells. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Responsed Drug | Cisplatin | Approved | ||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Pathway Response | ABC transporters | hsa02010 | ||
| Wnt signaling pathway | hsa04310 | |||
| Ubiquitin mediated proteolysis | hsa04120 | |||
| Cell Process | Ubiquitination degradation | |||
| In-vitro Model | CNE-1 | Normal | Homo sapiens | CVCL_6888 |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | A total of 2 × 106 cells was mixed with 0.2 ml PBS (pH 7.4) and 30% (v/v) Matrigel matrix (BD Biosciences). | |||
Histone-lysine N-methyltransferase EZH2 (EZH2)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [4] | |||
| Response Summary | METTL3 was highly expressed in nasopharyngeal carcinoma tissues, which inhibited Histone-lysine N-methyltransferase EZH2 (EZH2) expression by mediating m6A modification of EZH2 mRNA. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Cell Process | Cell viability | |||
| In-vitro Model | BEAS-2B | Normal | Homo sapiens | CVCL_0168 |
| C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 | |
| SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 | |
Insulin-like growth factor 1 receptor (IGF1R)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
| Response Summary | YTHDC2 promotes radiotherapy resistance of NPC cells by activating the Insulin-like growth factor 1 receptor (IGF1R)/ATK/S6 signaling axis and serves as a potential therapeutic target in radiosensitization of NPC cells. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | YTH domain-containing protein 2 (YTHDC2) | READER | ||
| Target Regulation | Up regulation | |||
| In-vitro Model | HK1-IRR (HK1-IRR (HK1-ionizing radiation radioresistent cell line) was derived from HK1 after a prolonged exposure of irradiation.HK1, a generous gift from Prof. Ya Cao (Cancer Research Institute, Central South University), was established from a recurrent nasopharynx carcinoma of a Chinese 17-year-old male patient) | |||
| NPC/HK1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7084 | |
| CNE2-IRR (CNE2-IRR (CNE2-ionizing radiation radioresistent cell line) was derived from CNE2 after a prolonged exposure of irradiation) | ||||
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | 2 × 106 cells resuspended in 50 uL of Matrigel (Corning) were subcutaneously injected into 4-6 weeks old male nude mice. When tumor volumes reached 150-200 mm3, animals were divided into control group and radiotherapy group. In the radiotherapy group, tumors were treated with a single irradiation (4 Gy) when tumor volumes reached approximately 150-200 mm3. The tumor stopped growing in the next few days and then restarted growth. | |||
Integrin subunit beta 3 (ITGB3)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [5] | |||
| Response Summary | FAM225A functioned as a competing endogenous RNA (ceRNA) for sponging miR-590-3p and miR-1275, leading to the upregulation of their target Integrin subunit beta 3 (ITGB3), and the activation of FAK/PI3K/Akt signaling to promote Nasopharyngeal carcinoma cell proliferation and invasion. FAM225A showed lower RNA stability after silencing of METTL3. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | PI3K-Akt signaling pathway | hsa04151 | ||
| Cell Process | Cell proliferation and metastasis | |||
| In-vitro Model | 5-8F | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C528 |
| 6-10B | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C529 | |
| C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| HK1 | Nasopharyngeal carcinoma | Acipenser baerii | CVCL_YE27 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| HONE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_8706 | |
| N2Tert (The human immortalized nasopharyngeal epithelial cell lines) | ||||
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| S18 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0U9 | |
| S26 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0UB | |
| SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 | |
| In-vivo Model | For the tumor growth model, 1 × 106 HNE1-Scrambled or HNE1-shFAM2225A 2# cells were injected into the axilla of the mice, and the tumor size was measured every 3 days. | |||
LIM and SH3 domain protein 1 (LASP1)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
| Response Summary | WTAP-mediated m6A modification of LIM and SH3 domain protein 1 (LASP1) enhanced its stability relying on the m6A reader IGF2BP2-dependent pathway. Furthermore, DIAPH1-AS1 acted as a molecular adaptor that promoted MTDH-LASP1 complex formation and upregulated LASP1 expression, ultimately facilitating NPC growth and metastasis. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Wilms tumor 1-associating protein (WTAP) | WRITER | ||
| Target Regulation | Up regulation | |||
| Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
| Response Summary | WTAP-mediated m6A modification of LIM and SH3 domain protein 1 (LASP1) enhanced its stability relying on the m6A reader IGF2BP2-dependent pathway. Furthermore, DIAPH1-AS1 acted as a molecular adaptor that promoted MTDH-LASP1 complex formation and upregulated LASP1 expression, ultimately facilitating NPC growth and metastasis. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) | READER | ||
| Target Regulation | Up regulation | |||
Poly [ADP-ribose] polymerase tankyrase-1 (Tankyrase)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
| Response Summary | METTL3 activated the luciferase activity of TOPflash (a reporter for beta-catenin/TCF signaling), and downregulation of METTL3 inhibited the expression of beta-catenin/TCF target genes vimentin and N-cadherin, which are two regulators of epithelial-mesenchymal transition. METTL3 silencing decreased the m6A methylation and total mRNA levels of Poly [ADP-ribose] polymerase tankyrase-1 (Tankyrase), a negative regulator of axin. METTL3 is a therapeutic target for NPC. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | Wnt signaling pathway | hsa04310 | ||
| Cell Process | Epithelial-mesenchymal transition | |||
| In-vitro Model | Neural progenitor cells (NPCs) (The progenitor cells of the CNS) | |||
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| HNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_FA07 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| In-vivo Model | 1 × 105 HNE2 cells (with or without METTL3 knockdown) were labeled with luciferase gene and injected into the tail vein of the nude mice. | |||
RAC-alpha serine/threonine-protein kinase (AKT1)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
| Response Summary | YTHDC2 promotes radiotherapy resistance of NPC cells by activating the IGF1R/RAC-alpha serine/threonine-protein kinase (AKT1)/S6 signaling axis and serves as a potential therapeutic target in radiosensitization of NPC cells. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | YTH domain-containing protein 2 (YTHDC2) | READER | ||
| Target Regulation | Up regulation | |||
| In-vitro Model | HK1-IRR (HK1-IRR (HK1-ionizing radiation radioresistent cell line) was derived from HK1 after a prolonged exposure of irradiation.HK1, a generous gift from Prof. Ya Cao (Cancer Research Institute, Central South University), was established from a recurrent nasopharynx carcinoma of a Chinese 17-year-old male patient) | |||
| NPC/HK1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7084 | |
| CNE2-IRR (CNE2-IRR (CNE2-ionizing radiation radioresistent cell line) was derived from CNE2 after a prolonged exposure of irradiation) | ||||
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | 2 × 106 cells resuspended in 50 uL of Matrigel (Corning) were subcutaneously injected into 4-6 weeks old male nude mice. When tumor volumes reached 150-200 mm3, animals were divided into control group and radiotherapy group. In the radiotherapy group, tumors were treated with a single irradiation (4 Gy) when tumor volumes reached approximately 150-200 mm3. The tumor stopped growing in the next few days and then restarted growth. | |||
Vimentin (vimentin)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
| Response Summary | METTL3 activated the luciferase activity of TOPflash (a reporter for beta-catenin/TCF signaling), and downregulation of METTL3 inhibited the expression of beta-catenin/TCF target genes Vimentin (vimentin) and N-cadherin, which are two regulators of epithelial-mesenchymal transition. METTL3 silencing decreased the m6A methylation and total mRNA levels of Tankyrase, a negative regulator of axin. METTL3 is a therapeutic target for NPC. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | Wnt signaling pathway | hsa04310 | ||
| Cell Process | Epithelial-mesenchymal transition | |||
| In-vitro Model | Neural progenitor cells (NPCs) (The progenitor cells of the CNS) | |||
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| HNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_FA07 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| In-vivo Model | 1 × 105 HNE2 cells (with or without METTL3 knockdown) were labeled with luciferase gene and injected into the tail vein of the nude mice. | |||
Zinc finger protein 750 (ZNF750)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
| Response Summary | m6A modifications maintained the low expression level of ZNF750 in NPC. Knocking down METTL3 stimulated endogenous Zinc finger protein 750 (ZNF750) expression, and vice versa. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Cell Process | Cell apoptosis | |||
| In-vitro Model | 5-8F | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C528 |
| 6-10B | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C529 | |
| C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| HONE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_8706 | |
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| S18 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0U9 | |
| S26 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0UB | |
| SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 | |
| In-vivo Model | BALB/c-nu mice (4-6 weeks old, female) were purchased from Charles River Laboratories (Beijing, China), and SUNE1-vector-luciferase or SUNE1-ZNF750-luciferase cells (1 × 106) were subcutaneously injected into the dorsal or ventral flank. | |||
Zinc finger protein SNAI1 (SNAI1)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [8] | |||
| Response Summary | Overexpression of Zinc finger protein SNAI1 (SNAI1) partially reversed the regulatory effects of METTL3 on EMT-related gene expressions and metastatic abilities in nasopharyngeal carcinoma. Knockdown of METTL3 decreased the enrichment abundance of Snail in anti-IGF2BP2. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Cell Process | Epithelial-mesenchymal transition | |||
| In-vitro Model | SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 |
| Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [8] | |||
| Response Summary | Overexpression of Zinc finger protein SNAI1 (SNAI1) partially reversed the regulatory effects of METTL3 on EMT-related gene expressions and metastatic abilities in nasopharyngeal carcinoma. Knockdown of METTL3 decreased the enrichment abundance of Snail in anti-IGF2BP2. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) | READER | ||
| Target Regulation | Up regulation | |||
| Cell Process | Epithelial-mesenchymal transition | |||
| In-vitro Model | SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 |
DIAPH1 antisense RNA 1 (DIAPH1-AS1)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
| Response Summary | WTAP-mediated m6A modification of DIAPH1 antisense RNA 1 (DIAPH1-AS1) enhanced its stability relying on the m6A reader IGF2BP2-dependent pathway. Furthermore, DIAPH1-AS1 acted as a molecular adaptor that promoted MTDH-LASP1 complex formation and upregulated LASP1 expression, ultimately facilitating NPC growth and metastasis. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Wilms tumor 1-associating protein (WTAP) | WRITER | ||
| Target Regulation | Up regulation | |||
| Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
| Response Summary | WTAP-mediated m6A modification of DIAPH1 antisense RNA 1 (DIAPH1-AS1) enhanced its stability relying on the m6A reader IGF2BP2-dependent pathway. Furthermore, DIAPH1-AS1 acted as a molecular adaptor that promoted MTDH-LASP1 complex formation and upregulated LASP1 expression, ultimately facilitating NPC growth and metastasis. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) | READER | ||
| Target Regulation | Up regulation | |||
Family with sequence similarity 225 member A (FAM225A)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [5] | |||
| Response Summary | Family with sequence similarity 225 member A (FAM225A) functioned as a competing endogenous RNA (ceRNA) for sponging miR-590-3p and miR-1275, leading to the upregulation of their target integrin beta-3 (ITGB3), and the activation of FAK/PI3K/Akt signaling to promote Nasopharyngeal carcinoma cell proliferation and invasion. FAM225A showed lower RNA stability after silencing of METTL3. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | PI3K-Akt signaling pathway | hsa04151 | ||
| Cell Process | Cell proliferation and metastasis | |||
| In-vitro Model | 5-8F | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C528 |
| 6-10B | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C529 | |
| C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| HK1 | Nasopharyngeal carcinoma | Acipenser baerii | CVCL_YE27 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| HONE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_8706 | |
| N2Tert (The human immortalized nasopharyngeal epithelial cell lines) | ||||
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| S18 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0U9 | |
| S26 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0UB | |
| SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 | |
| In-vivo Model | For the tumor growth model, 1 × 106 HNE1-Scrambled or HNE1-shFAM2225A 2# cells were injected into the axilla of the mice, and the tumor size was measured every 3 days. | |||
ZNFX1 antisense RNA 1 (ZFAS1)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [9] | |||
| Response Summary | Knockout of METTL3 can reduce the total expression of ZNFX1 antisense RNA 1 (ZFAS1). ZFAS1 is used as an oncogenic lncRNA, which can promote NPCcell proliferation, migration and tumor growth. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | PI3K-Akt signaling pathway | hsa04151 | ||
| Cell Process | Cell proliferation | |||
| Cell migration | ||||
| Cell autophagy | ||||
| In-vitro Model | SUNE1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6946 |
| S26 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0UB | |
| S18 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_B0U9 | |
| NP69 (A human immortalized nasopharyngeal epithelial) | ||||
| N2Tert (The human immortalized nasopharyngeal epithelial cell lines) | ||||
| HONE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_8706 | |
| HNE-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_0308 | |
| NPC/HK1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7084 | |
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| CNE-1 | Normal | Homo sapiens | CVCL_6888 | |
| C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 | |
| 6-10B | Nasopharyngeal carcinoma | Homo sapiens | CVCL_C529 | |
| In-vivo Model | Female BALB/c nude mice (ages 4-5 weeks, 18-20 g) were purchased from the Charles River Laboratories. For the tumor growth model, 1 × 106 HONE-1 sh-NC or sh-ZFAS1 cells were injected into the axilla of the mice, and the tumor size was measured every 3 days. On day 30, the mice were killed, and the tumors were dissected and weighed. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Disease
| In total 17 item(s) under this disease | ||
| Crosstalk ID: M6ACROT03065 | ||
| m6A Regulator | Wilms tumor 1-associating protein (WTAP) | |
| m6A Target | DIAPH1 antisense RNA 1 (DIAPH1-AS1) | |
| Epigenetic Regulator | CREB-binding protein (CREBBP) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Crosstalk ID: M6ACROT03152 | ||
| m6A Regulator | Methyltransferase-like 14 (METTL14) | |
| m6A Target | Ankyrin repeat domain-containing protein 22 (ANKRD22) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Crosstalk ID: M6ACROT03153 | ||
| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) | |
| m6A Target | Ankyrin repeat domain-containing protein 22 (ANKRD22) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Crosstalk ID: M6ACROT03186 | ||
| m6A Regulator | YTH domain-containing family protein 3 (YTHDF3) | |
| m6A Target | Chromobox protein homolog 1 (CBX1) | |
| Epigenetic Regulator | Chromobox protein homolog 1 (CBX1) | |
| Regulated Target | Histone H3 lysine 9 trimethylation (H3K9me3) | |
| Crosstalk relationship | m6A → Histone modification | |
| Crosstalk ID: M6ACROT03310 | ||
| m6A Regulator | Wilms tumor 1-associating protein (WTAP) | |
| m6A Target | LIM and SH3 domain protein 1 (LASP1) | |
| Epigenetic Regulator | CREB-binding protein (CREBBP) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Crosstalk ID: M6ACROT05396 | ||
| m6A Regulator | Methyltransferase-like 3 (METTL3) | |
| m6A Target | Family with sequence similarity 225 member A (FAM225A) | |
| Epigenetic Regulator | Family with sequence similarity 225 member A (FAM225A) | |
| Regulated Target | Integrin subunit beta 3 (ITGB3) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05601 | ||
| m6A Regulator | Wilms tumor 1-associating protein (WTAP) | |
| m6A Target | DIAPH1 antisense RNA 1 (DIAPH1-AS1) | |
| Epigenetic Regulator | DIAPH1 antisense RNA 1 (DIAPH1-AS1) | |
| Regulated Target | LIM and SH3 domain protein 1 (LASP1) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05602 | ||
| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) | |
| m6A Target | DIAPH1 antisense RNA 1 (DIAPH1-AS1) | |
| Epigenetic Regulator | DIAPH1 antisense RNA 1 (DIAPH1-AS1) | |
| Regulated Target | LIM and SH3 domain protein 1 (LASP1) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05627 | ||
| m6A Regulator | Methyltransferase-like 3 (METTL3) | |
| m6A Target | ZNFX1 antisense RNA 1 (ZFAS1) | |
| Epigenetic Regulator | ZNFX1 antisense RNA 1 (ZFAS1) | |
| Regulated Target | hsa-miR-100-3p | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05703 | ||
| m6A Regulator | Methyltransferase-like 3 (METTL3) | |
| m6A Target | hsa-miR-1908-5p | |
| Epigenetic Regulator | hsa-miR-1908-5p | |
| Regulated Target | HOP homeobox (HOPX) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05740 | ||
| m6A Regulator | Protein virilizer homolog (VIRMA) | |
| m6A Target | Long intergenic non-protein coding RNA 839 (LINC00839) | |
| Epigenetic Regulator | Long intergenic non-protein coding RNA 839 (LINC00839) | |
| Regulated Target | TATA-box binding protein associated factor 15 (TAF15) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05741 | ||
| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | |
| m6A Target | Long intergenic non-protein coding RNA 839 (LINC00839) | |
| Epigenetic Regulator | Long intergenic non-protein coding RNA 839 (LINC00839) | |
| Regulated Target | TATA-box binding protein associated factor 15 (TAF15) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05891 | ||
| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | |
| m6A Target | Myc proto-oncogene protein (MYC) | |
| Epigenetic Regulator | Testis associated oncogenic lncRNA (THORLNC) | |
| Regulated Target | Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1) | |
| Crosstalk relationship | ncRNA → m6A | |
| Drug | Triptonide | |
| Crosstalk ID: M6ACROT05892 | ||
| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | |
| m6A Target | Insulin-like growth factor 2 (IGF2) | |
| Epigenetic Regulator | Testis associated oncogenic lncRNA (THORLNC) | |
| Regulated Target | Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1) | |
| Crosstalk relationship | ncRNA → m6A | |
| Drug | Triptonide | |
| Crosstalk ID: M6ACROT05893 | ||
| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | |
| m6A Target | Zinc finger protein GLI1 (GLI1) | |
| Epigenetic Regulator | Testis associated oncogenic lncRNA (THORLNC) | |
| Regulated Target | Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1) | |
| Crosstalk relationship | ncRNA → m6A | |
| Drug | Triptonide | |
| Crosstalk ID: M6ACROT05943 | ||
| m6A Regulator | Methyltransferase-like 3 (METTL3) | |
| m6A Target | Family with sequence similarity 225 member A (FAM225A) | |
| Epigenetic Regulator | Family with sequence similarity 225 member A (FAM225A) | |
| Regulated Target | MicroRNA 1275 (MIR1275) | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05947 | ||
| m6A Regulator | Methyltransferase-like 3 (METTL3) | |
| m6A Target | Family with sequence similarity 225 member A (FAM225A) | |
| Epigenetic Regulator | MicroRNA 1275 (MIR1275) | |
| Regulated Target | Integrin subunit beta 3 (ITGB3) | |
| Crosstalk relationship | m6A → ncRNA | |
References