m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00587)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
S6
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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YTH domain-containing protein 2 (YTHDC2) [READER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | YTHDC2 promotes radiotherapy resistance of NPC cells by activating the IGF1R/ATK/40S ribosomal protein S6 (S6) signaling axis and serves as a potential therapeutic target in radiosensitization of NPC cells. | |||
| Target Regulation | Up regulation | |||
| Responsed Disease | Nasopharyngeal carcinoma | ICD-11: 2B6B | ||
| In-vitro Model | HK1-IRR (HK1-IRR (HK1-ionizing radiation radioresistent cell line) was derived from HK1 after a prolonged exposure of irradiation.HK1, a generous gift from Prof. Ya Cao (Cancer Research Institute, Central South University), was established from a recurrent nasopharynx carcinoma of a Chinese 17-year-old male patient) | |||
| NPC/HK1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7084 | |
| CNE2-IRR (CNE2-IRR (CNE2-ionizing radiation radioresistent cell line) was derived from CNE2 after a prolonged exposure of irradiation) | ||||
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | 2 × 106 cells resuspended in 50 uL of Matrigel (Corning) were subcutaneously injected into 4-6 weeks old male nude mice. When tumor volumes reached 150-200 mm3, animals were divided into control group and radiotherapy group. In the radiotherapy group, tumors were treated with a single irradiation (4 Gy) when tumor volumes reached approximately 150-200 mm3. The tumor stopped growing in the next few days and then restarted growth. | |||
Nasopharyngeal carcinoma [ICD-11: 2B6B]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | YTHDC2 promotes radiotherapy resistance of NPC cells by activating the IGF1R/ATK/40S ribosomal protein S6 (S6) signaling axis and serves as a potential therapeutic target in radiosensitization of NPC cells. | |||
| Responsed Disease | Nasopharyngeal carcinoma [ICD-11: 2B6B] | |||
| Target Regulator | YTH domain-containing protein 2 (YTHDC2) | READER | ||
| Target Regulation | Up regulation | |||
| In-vitro Model | HK1-IRR (HK1-IRR (HK1-ionizing radiation radioresistent cell line) was derived from HK1 after a prolonged exposure of irradiation.HK1, a generous gift from Prof. Ya Cao (Cancer Research Institute, Central South University), was established from a recurrent nasopharynx carcinoma of a Chinese 17-year-old male patient) | |||
| NPC/HK1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7084 | |
| CNE2-IRR (CNE2-IRR (CNE2-ionizing radiation radioresistent cell line) was derived from CNE2 after a prolonged exposure of irradiation) | ||||
| CNE-2 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_6889 | |
| In-vivo Model | 2 × 106 cells resuspended in 50 uL of Matrigel (Corning) were subcutaneously injected into 4-6 weeks old male nude mice. When tumor volumes reached 150-200 mm3, animals were divided into control group and radiotherapy group. In the radiotherapy group, tumors were treated with a single irradiation (4 Gy) when tumor volumes reached approximately 150-200 mm3. The tumor stopped growing in the next few days and then restarted growth. | |||
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00587)
| In total 2 m6A sequence/site(s) in this target gene | |||
| mod ID: M5CSITE004384 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378920-19378921:- | [2] | |
| Sequence | TCATTCATTGTATGCTCTTGCAGGGTTATGTGGTCCGAATC | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380384.5; ENST00000380381.3; ENST00000315377.4 | ||
| External Link | RMBase: m5C_site_42390 | ||
| mod ID: M5CSITE004385 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379587-19379588:- | [2] | |
| Sequence | CCTTCCCAGCCACTGGCTGCCAGAAACTCATTGAAGTGGAC | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380394.8; ENST00000380384.5; ENST00000380381.3 | ||
| External Link | RMBase: m5C_site_42391 | ||
N6-methyladenosine (m6A)
| In total 35 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE087686 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376140-19376141:- | [3] | |
| Sequence | CCAATGGTGGATAAAGTCAGACCTATTGTGTGTGGTAGTGG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817171 | ||
| mod ID: M6ASITE087687 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376223-19376224:- | [3] | |
| Sequence | CTTTTCATTGCTGATAGAAAACTACATAAATGAAGAGAGGG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HEK293T; BGC823; LCLs; A549; H1299 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817172 | ||
| mod ID: M6ASITE087688 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376260-19376261:- | [3] | |
| Sequence | TAACAAATAAATAAGATCAGACTCTGATCTCTGTTGACTTT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HEK293T; BGC823; LCLs; A549; H1299 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000498815.1 | ||
| External Link | RMBase: m6A_site_817173 | ||
| mod ID: M6ASITE087689 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376278-19376279:- | [4] | |
| Sequence | GAAATAAGATTTTTTGAGTAACAAATAAATAAGATCAGACT | ||
| Motif Score | 2.168095238 | ||
| Cell/Tissue List | HEK293T; hESC-HEK293T; AML | ||
| Seq Type List | DART-seq; MAZTER-seq; miCLIP | ||
| Transcript ID List | ENST00000380394.8; ENST00000498815.1; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817174 | ||
| mod ID: M6ASITE087690 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376321-19376322:- | [4] | |
| Sequence | TTTCCTCTCTGCGAGCTTCTACTTCTAAGTCTGAATCCAGT | ||
| Motif Score | 2.500660714 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380394.8; ENST00000380384.5; ENST00000498815.1 | ||
| External Link | RMBase: m6A_site_817175 | ||
| mod ID: M6ASITE087691 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376343-19376344:- | [3] | |
| Sequence | CAAATTGCGAAGAGACGCAGACTTTCCTCTCTGCGAGCTTC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HEK293T; BGC823; HepG2; hNPCs; fibroblasts; LCLs; A549; H1299; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000498815.1; ENST00000315377.4; ENST00000380384.5; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817176 | ||
| mod ID: M6ASITE087692 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376349-19376350:- | [4] | |
| Sequence | CAGGAACAAATTGCGAAGAGACGCAGACTTTCCTCTCTGCG | ||
| Motif Score | 2.871321429 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000498815.1; ENST00000315377.4; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817177 | ||
| mod ID: M6ASITE087693 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376364-19376365:- | [3] | |
| Sequence | GCTAAGGAGAAGCGCCAGGAACAAATTGCGAAGAGACGCAG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T; hESC-HEK293T; BGC823; HepG2; hNPCs; fibroblasts; LCLs; A549; H1299; Huh7; AML | ||
| Seq Type List | m6A-seq; MeRIP-seq; DART-seq; MAZTER-seq; miCLIP | ||
| Transcript ID List | ENST00000380384.5; ENST00000498815.1; ENST00000315377.4; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817178 | ||
| mod ID: M6ASITE087694 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376514-19376515:- | [3] | |
| Sequence | GAGGCTGCAGAATATGCTAAACTTTTGGCCAAGAGAATGAA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HEK293T; BGC823; HepG2; hNPCs; fibroblasts; LCLs; A549; H1299; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq; DART-seq | ||
| Transcript ID List | ENST00000498815.1; ENST00000380394.8; ENST00000315377.4; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817179 | ||
| mod ID: M6ASITE087695 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376552-19376553:- | [4] | |
| Sequence | TTGCTCTGAAGAAGCAGCGTACCAAGAAAAATAAAGAAGAG | ||
| Motif Score | 2.8355 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000498815.1; ENST00000315377.4; ENST00000380394.8; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817180 | ||
| mod ID: M6ASITE087696 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376587-19376588:- | [5] | |
| Sequence | TACTCCACGTGTCCTGCAGCACAAACGGCGGCGTATTGCTC | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000498815.1; ENST00000380384.5; ENST00000315377.4; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817181 | ||
| mod ID: M6ASITE087697 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376606-19376607:- | [4] | |
| Sequence | CCAAGATTCAGCGTCTTGTTACTCCACGTGTCCTGCAGCAC | ||
| Motif Score | 2.494845238 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000315377.4; ENST00000380384.5; ENST00000498815.1 | ||
| External Link | RMBase: m6A_site_817182 | ||
| mod ID: M6ASITE087698 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376636-19376637:- | [3] | |
| Sequence | TTTTAGGTAAGAAACCTAGGACCAAAGCACCCAAGATTCAG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; hNPCs; fibroblasts; LCLs; A549; H1299 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380384.5; ENST00000498815.1; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817183 | ||
| mod ID: M6ASITE087699 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376643-19376644:- | [3] | |
| Sequence | TTTGAATTTTTAGGTAAGAAACCTAGGACCAAAGCACCCAA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HepG2; hNPCs; fibroblasts; LCLs; A549; H1299 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000498815.1; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817184 | ||
| mod ID: M6ASITE087700 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376687-19376688:- | [3] | |
| Sequence | TAGATGTGGATTCTAACAAAACAAATATTGAAATGATTGAG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HepG2; hNPCs; fibroblasts; LCLs; A549; H1299 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000498815.1; ENST00000380394.8; ENST00000315377.4; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817185 | ||
| mod ID: M6ASITE087701 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378050-19378051:- | [6] | |
| Sequence | ACATGTTTGAGAATTCTGGGACTATTAGCACCACACACTTT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | AML | ||
| Seq Type List | miCLIP | ||
| Transcript ID List | ENST00000315377.4; ENST00000380384.5; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817186 | ||
| mod ID: M6ASITE087702 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378434-19378435:- | [3] | |
| Sequence | AGAGCTAGCAGAATCCGCAAACTTTTCAATCTCTCTAAAGA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HEK293T; HepG2; hNPCs; MT4 | ||
| Seq Type List | m6A-seq; DART-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817187 | ||
| mod ID: M6ASITE087703 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378481-19378482:- | [4] | |
| Sequence | TTCCTGGACTGACTGATACTACAGTGCCTCGCCGCCTGGGC | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000315377.4; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817188 | ||
| mod ID: M6ASITE087704 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378484-19378485:- | [4] | |
| Sequence | ATATTCCTGGACTGACTGATACTACAGTGCCTCGCCGCCTG | ||
| Motif Score | 2.53247619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000315377.4; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817189 | ||
| mod ID: M6ASITE087705 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378490-19378491:- | [4] | |
| Sequence | AGAAGGATATTCCTGGACTGACTGATACTACAGTGCCTCGC | ||
| Motif Score | 3.28175 | ||
| Cell/Tissue List | HEK293T; AML | ||
| Seq Type List | DART-seq; miCLIP | ||
| Transcript ID List | ENST00000315377.4; ENST00000380384.5; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817190 | ||
| mod ID: M6ASITE087706 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378494-19378495:- | [3] | |
| Sequence | GGAGAGAAGGATATTCCTGGACTGACTGATACTACAGTGCC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HEK293T; HepG2; hNPCs; MT4; AML | ||
| Seq Type List | m6A-seq; DART-seq; MeRIP-seq; miCLIP | ||
| Transcript ID List | ENST00000380384.5; ENST00000315377.4; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817191 | ||
| mod ID: M6ASITE087707 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378791-19378792:- | [7] | |
| Sequence | CCTGTTACAGACCAAGGAGAACTGGAGAAAGAAAGAGAAAA | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HepG2; MT4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380384.5; ENST00000380394.8; ENST00000380381.3 | ||
| External Link | RMBase: m6A_site_817192 | ||
| mod ID: M6ASITE087708 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378801-19378802:- | [7] | |
| Sequence | AAGGGGCATTCCTGTTACAGACCAAGGAGAACTGGAGAAAG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HepG2; MT4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380394.8; ENST00000380384.5; ENST00000380381.3 | ||
| External Link | RMBase: m6A_site_817193 | ||
| mod ID: M6ASITE087709 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378805-19378806:- | [8] | |
| Sequence | GAGTAAGGGGCATTCCTGTTACAGACCAAGGAGAACTGGAG | ||
| Motif Score | 2.07285119 | ||
| Cell/Tissue List | brain | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000380381.3; ENST00000315377.4; ENST00000380394.8; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817194 | ||
| mod ID: M6ASITE087710 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378882-19378883:- | [5] | |
| Sequence | ATCAGTGGTGGGAACGACAAACAAGGTTTCCCCATGAAGCA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | hESC-HEK293T; HepG2; MT4 | ||
| Seq Type List | MAZTER-seq; m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000380381.3; ENST00000380394.8; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817195 | ||
| mod ID: M6ASITE087711 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378886-19378887:- | [4] | |
| Sequence | CCGAATCAGTGGTGGGAACGACAAACAAGGTTTCCCCATGA | ||
| Motif Score | 2.865571429 | ||
| Cell/Tissue List | HEK293T; hESC-HEK293T | ||
| Seq Type List | DART-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380394.8; ENST00000380384.5; ENST00000380381.3 | ||
| External Link | RMBase: m6A_site_817196 | ||
| mod ID: M6ASITE087712 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378889-19378890:- | [4] | |
| Sequence | GGTCCGAATCAGTGGTGGGAACGACAAACAAGGTTTCCCCA | ||
| Motif Score | 2.925321429 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380384.5; ENST00000380381.3; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817197 | ||
| mod ID: M6ASITE087713 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379508-19379509:- | [4] | |
| Sequence | GGCCACAGAAGTTGCTGCTGACGCTCTGGGTGAAGAATGGA | ||
| Motif Score | 2.833690476 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380381.3; ENST00000380384.5; ENST00000315377.4; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817198 | ||
| mod ID: M6ASITE087714 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379524-19379525:- | [4] | |
| Sequence | TCTATGAGAAGCGTATGGCCACAGAAGTTGCTGCTGACGCT | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380384.5; ENST00000380394.8; ENST00000380381.3; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817199 | ||
| mod ID: M6ASITE087715 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379555-19379556:- | [3] | |
| Sequence | GAAGTGGACGATGAACGCAAACTTCGTACTTTCTATGAGAA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380381.3; ENST00000315377.4; ENST00000380384.5 | ||
| External Link | RMBase: m6A_site_817200 | ||
| mod ID: M6ASITE087716 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379561-19379562:- | [4] | |
| Sequence | CTCATTGAAGTGGACGATGAACGCAAACTTCGTACTTTCTA | ||
| Motif Score | 2.925321429 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000380384.5; ENST00000380381.3; ENST00000315377.4; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817201 | ||
| mod ID: M6ASITE087717 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379568-19379569:- | [4] | |
| Sequence | CCAGAAACTCATTGAAGTGGACGATGAACGCAAACTTCGTA | ||
| Motif Score | 3.616982143 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380384.5; ENST00000380381.3; ENST00000380394.8 | ||
| External Link | RMBase: m6A_site_817202 | ||
| mod ID: M6ASITE087718 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379582-19379583:- | [3] | |
| Sequence | CCAGCCACTGGCTGCCAGAAACTCATTGAAGTGGACGATGA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380381.3; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817203 | ||
| mod ID: M6ASITE087719 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379613-19379614:- | [3] | |
| Sequence | CCCTTTTAATCCTTAGCTGAACATCTCCTTCCCAGCCACTG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; hESC-HEK293T | ||
| Seq Type List | m6A-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380381.3; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817204 | ||
| mod ID: M6ASITE087720 | Click to Show/Hide the Full List | ||
| mod site | chr9:19380164-19380165:- | [3] | |
| Sequence | GTGATGGTGGCGAGTGTTAGACTGGGTTTGGGGAACGTGAA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380381.3; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: m6A_site_817205 | ||
2'-O-Methylation (2'-O-Me)
| In total 6 m6A sequence/site(s) in this target gene | |||
| mod ID: 2OMSITE000496 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376339-19376340:- | [9] | |
| Sequence | TTGCGAAGAGACGCAGACTTTCCTCTCTGCGAGCTTCTACT | ||
| Cell/Tissue List | HEK293 | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000498815.1; ENST00000380394.8; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: Nm_site_6581 | ||
| mod ID: 2OMSITE000497 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376340-19376341:- | [9] | |
| Sequence | ATTGCGAAGAGACGCAGACTTTCCTCTCTGCGAGCTTCTAC | ||
| Cell/Tissue List | HEK293 | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380384.5; ENST00000380394.8; ENST00000498815.1 | ||
| External Link | RMBase: Nm_site_6582 | ||
| mod ID: 2OMSITE000498 | Click to Show/Hide the Full List | ||
| mod site | chr9:19376553-19376554:- | [9] | |
| Sequence | ATTGCTCTGAAGAAGCAGCGTACCAAGAAAAATAAAGAAGA | ||
| Cell/Tissue List | HEK293; HeLa | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000380384.5; ENST00000380394.8; ENST00000498815.1; ENST00000315377.4 | ||
| External Link | RMBase: Nm_site_6583 | ||
| mod ID: 2OMSITE000499 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378730-19378731:- | [9] | |
| Sequence | GGATGCAAATCTGAGCGTTCTCAACTTGGTTATTGTAAAAA | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380394.8; ENST00000380384.5 | ||
| External Link | RMBase: Nm_site_6584 | ||
| mod ID: 2OMSITE000500 | Click to Show/Hide the Full List | ||
| mod site | chr9:19378732-19378733:- | [9] | |
| Sequence | GTGGATGCAAATCTGAGCGTTCTCAACTTGGTTATTGTAAA | ||
| Cell/Tissue List | HEK293 | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000315377.4; ENST00000380394.8; ENST00000380384.5 | ||
| External Link | RMBase: Nm_site_6585 | ||
| mod ID: 2OMSITE000501 | Click to Show/Hide the Full List | ||
| mod site | chr9:19379608-19379609:- | [9] | |
| Sequence | TTAATCCTTAGCTGAACATCTCCTTCCCAGCCACTGGCTGC | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | Nm-seq | ||
| Transcript ID List | ENST00000380394.8; ENST00000380381.3; ENST00000380384.5; ENST00000315377.4 | ||
| External Link | RMBase: Nm_site_6586 | ||
References