m6A-centered Disease Response Information
General Information of the Disease (ID: M6ADIS0055)
Name |
Head and neck squamous carcinoma
|
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ICD |
ICD-11: 2B6E
|
Full List of Target Gene(s) of This m6A-centered Disease Response
Catenin beta-1 (CTNNB1/Beta-catenin)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
Response Summary | FTO expression was significantly upregulated in HNSCC datasets and tissues. FTO expression was significantly correlated with Catenin beta-1 (CTNNB1/Beta-catenin) expression. Moreover, it exerted a tumorigenic effect by increasing CTNNB1 expression in an m6A-dependent manner. | |||
Responsed Disease | Head and neck squamous carcinoma [ICD-11: 2B6E] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Up regulation | |||
Pathway Response | Adherens junction | hsa04520 | ||
Cell Process | Cell proliferation and migration | |||
In-vitro Model | CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
FaDu | Hypopharyngeal squamous cell carcinoma | Homo sapiens | CVCL_1218 | |
Tu 686 | Laryngeal squamous cell carcinoma | Homo sapiens | CVCL_4916 | |
HN-6 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_8129 | |
HEp-2 | Endocervical adenocarcinoma | Homo sapiens | CVCL_1906 | |
Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1)
In total 3 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | The study identified the mechanism by which rapamycin affects autophagy via regulating METTL14, which provides a new idea for a potential targeted therapy for oral squamous cell carcinoma. METTL14 mediated Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1) expression via m6A modification and regulated autophagy levels and biological functions in oral squamous cell carcinoma. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 14 (METTL14) | WRITER | ||
Target Regulation | Down regulation | |||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cell autophagy | |||
In-vitro Model | CAL-33 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1108 |
HN-6 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_8129 | |
HSC-3 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1288 | |
In-vivo Model | Specific pathogen-free (SPF) female NOD/SCID mice (5-6 weeks old) were randomly distributed into two groups: the OECtrl group and the OEMETTL14 groups. Phosphate buffer (200 uL) containing approximately 5 × 107 HSC3 or CAL33 cells was subcutaneously injected into the inner thigh of each mouse. The mice were euthanized two weeks after injection, and the tumour xenografts were harvested, photographed, weighed, and fixed. | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
Response Summary | Rapamycin inhibited FTO activity, and directly targeted Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1) transcripts and mediated their expression in an m6A-dependent manner in oral squamous cell carcinoma. After FTO silencing, YTHDF2 captured eIF4G1 transcripts containing m6A, resulting in mRNA degradation and decreased expression of eIF4G1 protein, thereby promoting autophagy and reducing tumor occurrence. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Up regulation | |||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cell autophagy | |||
Experiment 3 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
Response Summary | Rapamycin inhibited FTO activity, and directly targeted Eukaryotic translation initiation factor 4 gamma 1 (EIF4G1) transcripts and mediated their expression in an m6A-dependent manner in oral squamous cell carcinoma. After FTO silencing, YTHDF2 captured eIF4G1 transcripts containing m6A, resulting in mRNA degradation and decreased expression of eIF4G1 protein, thereby promoting autophagy and reducing tumor occurrence. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | YTH domain-containing family protein 2 (YTHDF2) | READER | ||
Target Regulation | Down regulation | |||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cell autophagy | |||
M-phase inducer phosphatase 2 (CDC25B)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [4] | |||
Response Summary | METTL3 enhanced the m6A modification of M-phase inducer phosphatase 2 (CDC25B) mRNA, which maintained its stability and upregulated its expression, thereby activating G2/M phase of cell cycle and leading to HNSCC malignant progression. | |||
Responsed Disease | Head and neck squamous carcinoma [ICD-11: 2B6E] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Cell Process | Cell proliferation | |||
Cell migration | ||||
Cell invasion | ||||
In-vitro Model | Tu 686 | Laryngeal squamous cell carcinoma | Homo sapiens | CVCL_4916 |
Tu 212 | Head and neck squamous cell carcinoma | Homo sapiens | CVCL_4915 | |
SAS | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1675 | |
HUVEC-C | Normal | Homo sapiens | CVCL_2959 | |
HEp-2 | Endocervical adenocarcinoma | Homo sapiens | CVCL_1906 | |
FaDu | Hypopharyngeal squamous cell carcinoma | Homo sapiens | CVCL_1218 | |
In-vivo Model | Tumour xenograft models were established in nude mice bearing: SAS cells cells stably transfected with METTL3-shRNA and the corresponding control vector. The different HNSCC cells (5 × 106) were subcutaneously injected into the right axilla of nude mice (n = 6 per group). | |||
Mitogen-activated protein kinase 14 (p38/MAPK14)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [5] | |||
Response Summary | High METTL3 expression was positively correlated with more severe clinical features of OSCC tumors. Furthermore, METTL3-KD and cycloleucine, a methylation inhibitor, decreased m6A levels and down-regulated Mitogen-activated protein kinase 14 (p38/MAPK14) expression in OSCC cells. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
In-vitro Model | SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 |
SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 | |
In-vivo Model | Male BALB/c-nu/nu mice, 9-10 weeks of age, were acclimatized for a week prior to the experiments. Nude mice (6 each group) were subcutaneously inoculated with 4 × 106 SCC-25 or SCC-15 cells through an injection into the center of the back, which consistently caused tumor formation within 1 week of inoculation. To monitor the initial tumor appearance, animals were observed every day. After tumor appeared, measurements were made every week with a caliper. After 28 days, mice were sacrificed and tumors were dissected out to be weighed. | |||
Mothers against decapentaplegic homolog 2 (SMAD2)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
Response Summary | HNRNPA2B1, as an m6A reader, is critical in OSCC development. Its expression is significantly associated with the prognosis of Oral Squamous Cell Carcinoma(OSCC). m6A acts as a proto-oncogene that promotes the OSCC proliferation, migration, and invasion through the EMT progression via the LINE-1/TGF-beta1/Snail/Mothers against decapentaplegic homolog 2 (SMAD2) signaling pathway. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | TGF-beta signaling pathway | hsa04350 | ||
In-vitro Model | SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
Myc proto-oncogene protein (MYC)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
Response Summary | In oral squamous cell carcinoma, YTH N6-methyladenosine RNA binding protein 1 (YTH domain family, member 1 [YTHDF1]) mediated the m6A-increased stability of Myc proto-oncogene protein (MYC) mRNA catalyzed by METTL3. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | YTH domain-containing family protein 1 (YTHDF1) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | RNA degradation | hsa03018 | ||
Cell Process | RNA stability | |||
In-vitro Model | CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
NHOK (Normal oral keratinocytes) | ||||
SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
TSCCa | Endocervical adenocarcinoma | Homo sapiens | CVCL_VL15 | |
In-vivo Model | The stable transfection of SCC25 cells (1 × 107 cells in 0.1 mL) with lenti-sh-METTL3 or blank vectors was injected subcutaneously into BALB/c nude mice. | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
Response Summary | In oral squamous cell carcinoma, YTH N6-methyladenosine RNA binding protein 1 (YTH domain family, member 1 [YTHDF1]) mediated the m6A-increased stability of Myc proto-oncogene protein (MYC) mRNA catalyzed by METTL3. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | RNA degradation | hsa03018 | ||
Cell Process | RNA stability | |||
In-vitro Model | CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
NHOK (Normal oral keratinocytes) | ||||
SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
TSCCa | Endocervical adenocarcinoma | Homo sapiens | CVCL_VL15 | |
In-vivo Model | The stable transfection of SCC25 cells (1 × 107 cells in 0.1 mL) with lenti-sh-METTL3 or blank vectors was injected subcutaneously into BALB/c nude mice. | |||
Polycomb complex protein BMI-1 (BMI1)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [8] | |||
Response Summary | METTL3 promotes Polycomb complex protein BMI-1 (BMI1) translation in OSCC under the cooperation with m6A reader IGF2BP1. And the study revealed that METTL3 promotes OSCC proliferation and metastasis through BMI1 m6A methylation. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
In-vitro Model | UM1 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_VH00 |
SCC-9 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1685 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 | |
HSC-3 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1288 | |
HOK | Normal | Hexagrammos otakii | CVCL_YE19 | |
In-vivo Model | To construct the subcutaneous tumorigenesis model, the cells were suspended in 100 uL of PBS and Matrigel matrix (BD Biosciences, USA) (1:1) and injected into the right flanks of 6-week-old female BALB/c nude mice.To construct the lymph node metastasis model, we injected 1 × 105/50 uL stably infected SCC9 cells into the left hind footpads of BALB/c mice. | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [8] | |||
Response Summary | METTL3 promotes Polycomb complex protein BMI-1 (BMI1) translation in OSCC under the cooperation with m6A reader IGF2BP1. And the study revealed that METTL3 promotes OSCC proliferation and metastasis through BMI1 m6A methylation. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | READER | ||
Target Regulation | Up regulation | |||
In-vitro Model | UM1 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_VH00 |
SCC-9 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1685 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 | |
HSC-3 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1288 | |
HOK | Normal | Hexagrammos otakii | CVCL_YE19 | |
In-vivo Model | To construct the subcutaneous tumorigenesis model, the cells were suspended in 100 uL of PBS and Matrigel matrix (BD Biosciences, USA) (1:1) and injected into the right flanks of 6-week-old female BALB/c nude mice.To construct the lymph node metastasis model, we injected 1 × 105/50 uL stably infected SCC9 cells into the left hind footpads of BALB/c mice. | |||
Programmed cell death 1 ligand 1 (CD274/PD-L1)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [9] | |||
Response Summary | METTL3 intensified the metastasis and proliferation of OSCC by modulating the m6A amounts of PRMT5 and Programmed cell death 1 ligand 1 (CD274/PD-L1). | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | PD-L1 expression and PD-1 checkpoint pathway in cancer | hsa05235 | ||
In-vitro Model | SCC-9 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1685 |
SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
In-vivo Model | Six-week-old nude mice were randomly divided into two groups (three mice per group) and cultured with continuous access to sterile food and water in pathogen-free sterile conditions. To establish the OSCC xenograft model, we subcutaneously injected 5 × 106 SCC-9 cells stably transfected with METTL3 shRNA or sh-NC vectors into nude mice. | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [10] | |||
Response Summary | Arecoline-induced FTO promotes the stability and expression levels of Programmed cell death 1 ligand 1 (CD274/PD-L1) transcripts through mediating m6A modification and MYC activity, respectively. PD-L1 upregulation confers superior cell proliferation, migration, and resistance to T-cell killing to OSCC cells. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Up regulation | |||
Pathway Response | PD-L1 expression and PD-1 checkpoint pathway in cancer | hsa05235 | ||
Protein arginine N-methyltransferase 5 (PRMT5)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [9] | |||
Response Summary | METTL3 intensified the metastasis and proliferation of OSCC by modulating the m6A amounts of Protein arginine N-methyltransferase 5 (PRMT5) and PD-L1. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | PD-L1 expression and PD-1 checkpoint pathway in cancer | hsa05235 | ||
In-vitro Model | SCC-9 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1685 |
SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
In-vivo Model | Six-week-old nude mice were randomly divided into two groups (three mice per group) and cultured with continuous access to sterile food and water in pathogen-free sterile conditions. To establish the OSCC xenograft model, we subcutaneously injected 5 × 106 SCC-9 cells stably transfected with METTL3 shRNA or sh-NC vectors into nude mice. | |||
RIG-I-like receptor 1 (RIG-I)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [11] | |||
Response Summary | ALKBH5 overexpression inhibits RIG-I-mediated IFN-Alpha secretion through the IKK-Epsilon/TBK1/IRF3 pathway. Upregulation of AKLBH5 negatively correlates with RIG-I-like receptor 1 (RIG-I) and IFN-Alpha expression in head and neck squamous cell carcinoma (HNSCC) patients. | |||
Responsed Disease | Head and neck squamous carcinoma [ICD-11: 2B6E] | |||
Target Regulator | RNA demethylase ALKBH5 (ALKBH5) | ERASER | ||
Target Regulation | Down regulation | |||
Pathway Response | RIG-I-like receptor signaling pathway | hsa04622 | ||
In-vitro Model | CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 | |
SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 | |
HEK293T | Normal | Homo sapiens | CVCL_0063 | |
() | ||||
In-vivo Model | For the subcutaneous implantation model, 1 × 106 Cal27 cells stably transduced with lentivirus were injected into the left or right flanks of BALB/c nude mice (aged 4-6 weeks). Following stable transfection, 2 × 105 SCC7 cells were subcutaneously inoculated into C3H mice (aged 6-8 weeks). | |||
Transcriptional coactivator YAP1 (YAP1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [12] | |||
Response Summary | Stable knockdown of FTO inhibited OSCC cell viability, colony formation, and tumor growth. Further, FTO depletion increased Transcriptional coactivator YAP1 (YAP1) m6A modification at mRNA 3'-untranslated region, accelerating the degradation of YAP1 mRNA, a well-documented oncogene promoting OSCC progression. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Up regulation | |||
Transforming growth factor beta-1 proprotein (TGFB1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
Response Summary | HNRNPA2B1, as an m6A reader, is critical in OSCC development. Its expression is significantly associated with the prognosis of Oral Squamous Cell Carcinoma(OSCC). m6A acts as a proto-oncogene that promotes the OSCC proliferation, migration, and invasion through the EMT progression via the LINE-1/Transforming growth factor beta-1 proprotein (TGFB1)/Snail/Smad2 signaling pathway. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | TGF-beta signaling pathway | hsa04350 | ||
In-vitro Model | SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
Zinc finger protein SNAI1 (SNAI1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
Response Summary | HNRNPA2B1, as an m6A reader, is critical in OSCC development. Its expression is significantly associated with the prognosis of Oral Squamous Cell Carcinoma(OSCC). m6A acts as a proto-oncogene that promotes the OSCC proliferation, migration, and invasion through the EMT progression via the LINE-1/TGF-beta1/Zinc finger protein SNAI1 (SNAI1)/Smad2 signaling pathway. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | TGF-beta signaling pathway | hsa04350 | ||
In-vitro Model | SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
Zinc finger protein SNAI2 (Slug)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [13] | |||
Response Summary | Mechanistic investigations revealed that Zinc finger protein SNAI2 (Slug), a key EMT-related transcriptional factor, is the direct target of IGF2BP2, and essential for IGF2BP2-regulated EMT and metastasis in HNSCC. | |||
Responsed Disease | Head and neck squamous carcinoma [ICD-11: 2B6E] | |||
Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | Adherens junction | hsa04520 | ||
Cell Process | Epithelial-mesenchymal transition | |||
In-vitro Model | SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 |
FaDu | Hypopharyngeal squamous cell carcinoma | Homo sapiens | CVCL_1218 | |
In-vivo Model | To construct the metastasis model, 5 × 106 FaDu cells were transfected with sh-IGF2BP2-luc and sh-NC-luc, suspended in 60 uL PBS, and then injected into the footpads of the mice. Six weeks after injection, mice were subjected to bioluminescence imaging to evaluate lymphatic metastasis. For bioluminescence imaging, mice were anesthetized by inhaling 2% isoflurane for approximately 5 min, injected intraperitoneally with D-Luciferin potassium salt (200 uL, 150 ug/ml, ST196, Beyotime, Shanghai, China), and imaged with a bioluminescence system (NightOwl II LB983, Berthold Technologies, Germany). | |||
LncRNA activating regulator of DKK1 (LNCAROD)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [14] | |||
Response Summary | The N6-methyladenosine (m6A) modification mediated by METTL3 and METTL14 enhanced the stability of LncRNA activating regulator of DKK1 (LNCAROD) in head and neck squamous cell carcinoma cells. LNCAROD is stabilized by m6A methylation and promotes cancer progression via forming a ternary complex with HSPA1A and YBX1 in head and neck squamous cell carcinoma. | |||
Responsed Disease | Head and neck squamous carcinoma [ICD-11: 2B6E] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Proteasome | hsa03050 | ||
Cell Process | Proteasomal degradation | |||
In-vitro Model | C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
FaDu | Hypopharyngeal squamous cell carcinoma | Homo sapiens | CVCL_1218 | |
HK1 | Nasopharyngeal carcinoma | Acipenser baerii | CVCL_YE27 | |
NP69 (A human immortalized nasopharyngeal epithelial) | ||||
Tca8113 | Endocervical adenocarcinoma | Homo sapiens | CVCL_6851 | |
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [14] | |||
Response Summary | The N6-methyladenosine (m6A) modification mediated by METTL3 and METTL14 enhanced the stability of LncRNA activating regulator of DKK1 (LNCAROD) in head and neck squamous cell carcinoma cells. LNCAROD is stabilized by m6A methylation and promotes cancer progression via forming a ternary complex with HSPA1A and YBX1 in head and neck squamous cell carcinoma. | |||
Responsed Disease | Head and neck squamous carcinoma [ICD-11: 2B6E] | |||
Target Regulator | Methyltransferase-like 14 (METTL14) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Proteasome | hsa03050 | ||
Cell Process | Proteasomal degradation | |||
In-vitro Model | C666-1 | Nasopharyngeal carcinoma | Homo sapiens | CVCL_7949 |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
FaDu | Hypopharyngeal squamous cell carcinoma | Homo sapiens | CVCL_1218 | |
HK1 | Nasopharyngeal carcinoma | Acipenser baerii | CVCL_YE27 | |
NP69 (A human immortalized nasopharyngeal epithelial) | ||||
Tca8113 | Endocervical adenocarcinoma | Homo sapiens | CVCL_6851 | |
Metastasis associated lung adenocarcinoma transcript 1 (MALAT1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [15] | |||
Response Summary | METTL14 and lncRNA Metastasis associated lung adenocarcinoma transcript 1 (MALAT1) were upregulated, and miR-224-5p was downregulated in OSCC tissues and cells. METTL14 induced m6A modification of MALAT1 to upregulate MALAT1. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Methyltransferase-like 14 (METTL14) | WRITER | ||
Target Regulation | Up regulation | |||
In-vitro Model | SCC-25 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1682 |
SCC-15 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1681 | |
Hs 680.Tg | Normal | Homo sapiens | CVCL_0842 | |
FaDu | Hypopharyngeal squamous cell carcinoma | Homo sapiens | CVCL_1218 | |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
In-vivo Model | Lentiviruses containing sh-METTL-14 and its negative control (RiboBio Co., Ltd., Guangzhou, China) were transduced into CAL27 cells and stably transduced cells were screened using puromycin. CAL27 cells (3 × 106 cells/mouse) were subcutaneously inoculated into the posterior flank of each mouse (N = 12/group). | |||
LINE-1 (LINE-1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
Response Summary | HNRNPA2B1, as an m6A reader, is critical in OSCC development. Its expression is significantly associated with the prognosis of Oral Squamous Cell Carcinoma(OSCC). m6A acts as a proto-oncogene that promotes the OSCC proliferation, migration, and invasion through the EMT progression via the LINE-1 (LINE-1)/TGF-beta1/Snail/Smad2 signaling pathway. | |||
Responsed Disease | Oral squamous cell carcinoma [ICD-11: 2B6E.0] | |||
Target Regulator | Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | TGF-beta signaling pathway | hsa04350 | ||
In-vitro Model | SCC-4 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1684 |
CAL-27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 | |
References