General Information of the m6A Target Gene (ID: M6ATAR00375)
Target Name Mutated in multiple advanced cancers 1 (PTEN)
Synonyms
Mutated in multiple advanced cancers 1; Phosphatase and tensin homolog; MMAC1; TEP1
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Gene Name PTEN
Chromosomal Location 10q23.31
Family PTEN phosphatase protein family
Function
Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine-phosphorylated proteins. Also acts as a lipid phosphatase, removing the phosphate in the D3 position of the inositol ring from phosphatidylinositol 3,4,5-trisphosphate, phosphatidylinositol 3,4-diphosphate, phosphatidylinositol 3-phosphate and inositol 1,3,4,5-tetrakisphosphate with order of substrate preference in vitro PtdIns(3,4,5)P3 > PtdIns(3,4)P2 > PtdIns3P > Ins(1,3,4,5)P4. The lipid phosphatase activity is critical for its tumor suppressor function. Antagonizes the PI3K-AKT/PKB signaling pathway by dephosphorylating phosphoinositides and thereby modulating cell cycle progression and cell survival. The unphosphorylated form cooperates with MAGI2 to suppress AKT1 activation. Dephosphorylates tyrosine-phosphorylated focal adhesion kinase and inhibits cell migration and integrin-mediated cell spreading and focal adhesion formation. Plays a role as a key modulator of the AKT-mTOR signaling pathway controlling the tempo of the process of newborn neurons integration during adult neurogenesis, including correct neuron positioning, dendritic development and synapse formation. May be a negative regulator of insulin signaling and glucose metabolism in adipose tissue. The nuclear monoubiquitinated form possesses greater apoptotic potential, whereas the cytoplasmic nonubiquitinated form induces less tumor suppressive ability. In motile cells, suppresses the formation of lateral pseudopods and thereby promotes cell polarization and directed movement.; [Isoform alpha]: Functional kinase, like isoform 1 it antagonizes the PI3K-AKT/PKB signaling pathway. Plays a role in mitochondrial energetic metabolism by promoting COX activity and ATP production, via collaboration with isoform 1 in increasing protein levels of PINK1.
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Gene ID 5728
Uniprot ID
PTEN_HUMAN
HGNC ID
HGNC:9588
KEGG ID
hsa:5728
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
PTEN can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line LX2 cell line Homo sapiens
Treatment: shMETTL3 LX2 cells
Control: shLuc LX2 cells
GSE207909
Regulation
logFC: 9.60E-01
p-value: 1.46E-37
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between PTEN and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 2.25E+00 GSE60213
In total 4 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3 depletion in human myeloid leukemia cell lines induces cell differentiation and apoptosis and delays leukemia progression in recipient mice in vivo. Single-nucleotide-resolution mapping of m6A coupled with ribosome profiling reveals that m6A promotes the translation of c-MYC, BCL2 and Mutated in multiple advanced cancers 1 (PTEN) mRNAs in the human acute myeloid leukemia MOLM-13 cell line. Moreover, loss of METTL3 leads to increased levels of phosphorylated AKT.
Target Regulation Up regulation
Responsed Disease Acute myeloid leukaemia ICD-11: 2A60
Cell Process Cell differentiation and apoptosis
Apoptosis (hsa04210)
In-vitro Model HSPC (Human hematopoietic stem cell)
In-vivo Model 500,000 selected cells were injected via tail vein or retro-orbital route into female NSG (6-8 week old) recipient mice that had been sublethally irradiated with 475 cGy one day before transplantation.
Experiment 2 Reporting the m6A Methylation Regulator of This Target Gene [2]
Response Summary The molecular mechanism underlying the effect of LINC00470 on chronic myelocytic leukaemia by reducing the Mutated in multiple advanced cancers 1 (PTEN) stability via RNA methyltransferase METTL3, thus leading to the inhibition of cell autophagy while promoting chemoresistance in CML.
Target Regulation Down regulation
Responsed Disease Chronic myeloid leukaemia ICD-11: 2B33.2
Pathway Response Autophagy hsa04140
Cell Process RNA stability
Cell autophagy
In-vitro Model K-562 Chronic myelogenous leukemia Homo sapiens CVCL_0004
KCL-22 Chronic myelogenous leukemia Homo sapiens CVCL_2091
In-vivo Model In the control mice or ADR mice group, the parental or chemo-resistant K562 cells were infected with LV-shCtrl. In the ADR + shLINC00470 group, the chemo-resistant K562 cells were infected with LV- shLINC00470. These cells were injected, respectively, into these 5-week-old mice subcutaneously.
Experiment 3 Reporting the m6A Methylation Regulator of This Target Gene [3]
Response Summary Bete-elemene exerted the restrictive impacts on the cell growth of lung cancer in vivo and in vitro through targeting METTL3. Bete-elemene contributed to the augmented PTEN expression via suppressing its m6A modification.
Target Regulation Down regulation
Responsed Disease Lung cancer ICD-11: 2C25
In-vitro Model NCI-H1299 Lung large cell carcinoma Homo sapiens CVCL_0060
A-549 Lung adenocarcinoma Homo sapiens CVCL_0023
In-vivo Model Four-week-old BALB/c nude mice were randomly divided into three groups: (1) vector group, (2) vector + Bete-elemene group, and (3) Bete-elemene + METTL3 group. Nude mice were raised in an SPF level animal house and were free to eat and drink. Mice in the vector group were subcutaneously injected with lung cancer cells transfected with empty vector and did not receive Bete-elemene administration, and this group was implemented as the negative control. Following establishing orthotopic xenografts by using A549 or H1299 cells transfected with empty vector, mice in the vector + Bete-elemene group underwent intraperitoneal injection with Bete-elemene once a day. For the subcutaneous transplanted model, A549 or H1299 cells transfected with METTL3-overexpressing vector were inoculated into mice from the Bete-elemene + METTL3 group. Then, mice were intraperitoneally administrated with Bete-elemene once a day. Three weeks later, all the animals were euthanized with CO2. Xenografts were removed and weighted after mice were euthanatized.
Experiment 4 Reporting the m6A Methylation Regulator of This Target Gene [4]
Response Summary METTL3/YTHDF2/Mutated in multiple advanced cancers 1 (PTEN) axis exerts a significant role in hypoxia induced PASMCs proliferation, providing a novel therapeutic target for hypoxic pulmonary hypertension.
Target Regulation Down regulation
Responsed Disease Pulmonary hypertension due to lung disease or hypoxia ICD-11: BB01.2
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Cell apoptosis
In-vitro Model PASMC cell line (Pulmonary artery smooth muscle cell)
In-vivo Model 10 rats were divided into control and HPH group. In detail, 5 rats of the hypoxia groups were exposed to hypoxia (10%O2) chamber (AiPu XBS-02B, China) for 4 weeks. In addition, 5 rats of control group were kept under normoxic conditions (21% O2) for 4 weeks. Rats were housed in standard polypropylene cages under controlled photocycle (12 h light/12 h dark) under 22-25 ℃ temperature.
Methyltransferase-like 14 (METTL14) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL14
Cell Line HepG2 cell line Homo sapiens
Treatment: shMETTL14 HepG2 cells
Control: shCtrl HepG2 cells
GSE121949
Regulation
logFC: -9.93E-01
p-value: 1.46E-04
More Results Click to View More RNA-seq Results
In total 3 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [5]
Response Summary METTL14 inhibits tumor growth and metastasis of Stomach Adenocarcinoma via stabilization of Mutated in multiple advanced cancers 1 (PTEN) mRNA expression. Therefore, METTL14 is a potential biomarker of prognosis and therapeutic targets for Stomach Adenocarcinoma.
Target Regulation Up regulation
Responsed Disease Gastric cancer ICD-11: 2B72
Cell Process Cell proliferation
Cell migration
Cell invasion
In-vitro Model RGM1 Normal Rattus norvegicus CVCL_0499
HGC-27 Gastric carcinoma Homo sapiens CVCL_1279
BGC-823 Gastric carcinoma Homo sapiens CVCL_3360
AGS Gastric adenocarcinoma Homo sapiens CVCL_0139
In-vivo Model For the purpose of enhancing the overall randomization of the experiment, a random comparison table had been employed. Accordingly, 5-wk-old male nude athymic BALB/c nu/nu mice (Slack, Shanghai, China) were randomly divided into two parts including a control group (NC) and the experimental group METTL14-OE. For developing subcutaneous xeno transplantation model, 5 × 106 HGC-27 cells stably transfected with NC or METTL14 overexpression were subcutaneously incorporated for 5-week-old BALB/c nude mice. The mice experienced euthanasia after 27 days of inoculation and obtained xenografts's mass was obtained. Tumor volume over three days was obtained. To create mouse STAD liver metastasis orthotopic tumor model, 1 × 106 HGC-27 cells under stable transfection with NC or METTL14 overexpression were added to subserosal gastric wall of BALB/c nude mice.
Experiment 2 Reporting the m6A Methylation Regulator of This Target Gene [6]
Response Summary Upregulation of METTL14 inhibited ccRCC cells proliferation and migration in vitro. Overexpression of METTL14 increased the m6A enrichment of Mutated in multiple advanced cancers 1 (PTEN), and promoted Pten expression. METTL14-enhanced Pten mRNA stability was dependent on YTHDF1.
Target Regulation Up regulation
Responsed Disease Renal cell carcinoma of kidney ICD-11: 2C90.0
Pathway Response PI3K-Akt signaling pathway hsa04151
Experiment 3 Reporting the m6A Methylation Regulator of This Target Gene [7]
Response Summary METTL14-regulated PI3K/Akt signaling pathway via Mutated in multiple advanced cancers 1 (PTEN) affected HDAC5-mediated EMT of renal tubular cells in diabetic kidney disease.
Target Regulation Down regulation
Responsed Disease Chronic kidney disease ICD-11: GB61.Z
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Epithelial-mesenchymal transition
In-vitro Model HK-2 [Human kidney] Normal Homo sapiens CVCL_0302
In-vivo Model Twenty mice were randomly divided into three groups: normal mice group (N), diabetic mice group (DM), and diabetic mice administrated with TSA group (DM + TSA).
RNA demethylase ALKBH5 (ALKBH5) [ERASER]
Representative RNA-seq result indicating the expression of this target gene regulated by ALKBH5
Cell Line MOLM-13 cell line Homo sapiens
Treatment: shALKBH5 MOLM-13 cells
Control: shNS MOLM-13 cells
GSE144968
Regulation
logFC: -2.10E+00
p-value: 1.89E-02
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [8]
Response Summary ALKBH5-mediated m6A demethylation enhanced the stability of KCNK15-AS1. In pancreatic cancer, KCNK15-AS1 bound to KCNK15 to inhibit its translation, and interacted with MDM2 to induce REST ubiquitination, which eventually facilitated Mutated in multiple advanced cancers 1 (PTEN) transcription to inactivate AKT pathway.
Responsed Disease Pancreatic cancer ICD-11: 2C10
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Cell proliferation
Cell migration
Epithelial-mesenchymal transition
Cell apoptosis
In-vitro Model BxPC-3 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0186
CFPAC-1 Cystic fibrosis Homo sapiens CVCL_1119
MIA PaCa-2 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0428
PANC-1 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0480
YTH domain-containing protein 1 (YTHDC1) [READER]
Representative RNA-seq result indicating the expression of this target gene regulated by YTHDC1
Cell Line MOLM-13 cell line Homo sapiens
Treatment: shYTHDC1 MOLM13 cells
Control: shControl MOLM13 cells
GSE168565
Regulation
logFC: 7.38E-01
p-value: 4.67E-08
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [9]
Response Summary YTHDC1 promoted Mutated in multiple advanced cancers 1 (PTEN) mRNA degradation to increase Akt phosphorylation, thus facilitating neuronal survival in particular after ischemia, modulating m6A reader YTHDC1 provide a potential therapeutic target for ischemic stroke.
Target Regulation Down regulation
Responsed Disease Acute ischemic stroke ICD-11: 8B11
In-vitro Model HEK293T Normal Homo sapiens CVCL_0063
In-vivo Model Male SD rats weighing 200-250 g were anesthetized using 4% isoflurane in 70% N2O and 30% O2 with a mask. A midline incision was made in the neck, the left external carotid artery (ECA) was carefully exposed and dissected, a monofilament nylon suture with a diameter of about 0.22 mm was inserted from the ECA into the internal carotid artery, and the left middle cerebral artery (MCA) was blocked. After occlusion for 90 minutes, the suture was removed for reperfusion, and ECA was ligated to close the wound. Sham-operated rats underwent the same surgery except for suture insertion. Rats were maintained on top of a warming pad (RWD, 69003) during the above procedures. The breathing machine was used to monitor the respiration of rats. The rats were returned to a heated cage during the recovery phase with free access to food and water.
YTH domain-containing family protein 1 (YTHDF1) [READER]
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [6]
Response Summary Upregulation of METTL14 inhibited ccRCC cells proliferation and migration in vitro. Overexpression of METTL14 increased the m6A enrichment of Mutated in multiple advanced cancers 1 (PTEN), and promoted Pten expression. METTL14-enhanced Pten mRNA stability was dependent on YTHDF1.
Target Regulation Up regulation
Responsed Disease Renal cell carcinoma of kidney ICD-11: 2C90.0
Pathway Response PI3K-Akt signaling pathway hsa04151
YTH domain-containing family protein 2 (YTHDF2) [READER]
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [4]
Response Summary METTL3/YTHDF2/Mutated in multiple advanced cancers 1 (PTEN) axis exerts a significant role in hypoxia induced PASMCs proliferation, providing a novel therapeutic target for hypoxic pulmonary hypertension.
Target Regulation Down regulation
Responsed Disease Pulmonary hypertension due to lung disease or hypoxia ICD-11: BB01.2
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Cell apoptosis
In-vitro Model PASMC cell line (Pulmonary artery smooth muscle cell)
In-vivo Model 10 rats were divided into control and HPH group. In detail, 5 rats of the hypoxia groups were exposed to hypoxia (10%O2) chamber (AiPu XBS-02B, China) for 4 weeks. In addition, 5 rats of control group were kept under normoxic conditions (21% O2) for 4 weeks. Rats were housed in standard polypropylene cages under controlled photocycle (12 h light/12 h dark) under 22-25 ℃ temperature.
Solid tumour/cancer [ICD-11: 2A00-2F9Z]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response []
Response Summary In this review, we discuss the specific roles of m6A "writers", "erasers", and "readers" in normal physiology and how their altered expression promotes tumorigenesis. We also describe the potential of exploiting the aberrant expression of these enzymes for cancer diagnosis, prognosis, and the development of novel therapies. The abnormal expression of m6A regulatory enzymes affects m6A abundance and consequently dysregulates the expression of tumor suppressor genes and oncogenes, including MYC, SOCS2, ADAM19, and Mutated in multiple advanced cancers 1 (PTEN).
Responsed Disease Solid tumour/cancer [ICD-11: 2A00-2F9Z]
Acute myeloid leukaemia [ICD-11: 2A60]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3 depletion in human myeloid leukemia cell lines induces cell differentiation and apoptosis and delays leukemia progression in recipient mice in vivo. Single-nucleotide-resolution mapping of m6A coupled with ribosome profiling reveals that m6A promotes the translation of c-MYC, BCL2 and Mutated in multiple advanced cancers 1 (PTEN) mRNAs in the human acute myeloid leukemia MOLM-13 cell line. Moreover, loss of METTL3 leads to increased levels of phosphorylated AKT.
Responsed Disease Acute myeloid leukaemia [ICD-11: 2A60]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Cell Process Cell differentiation and apoptosis
Apoptosis (hsa04210)
In-vitro Model HSPC (Human hematopoietic stem cell)
In-vivo Model 500,000 selected cells were injected via tail vein or retro-orbital route into female NSG (6-8 week old) recipient mice that had been sublethally irradiated with 475 cGy one day before transplantation.
Malignant haematopoietic neoplasm [ICD-11: 2B33]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [2]
Response Summary The molecular mechanism underlying the effect of LINC00470 on chronic myelocytic leukaemia by reducing the Mutated in multiple advanced cancers 1 (PTEN) stability via RNA methyltransferase METTL3, thus leading to the inhibition of cell autophagy while promoting chemoresistance in CML.
Responsed Disease Chronic myeloid leukaemia [ICD-11: 2B33.2]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Pathway Response Autophagy hsa04140
Cell Process RNA stability
Cell autophagy
In-vitro Model K-562 Chronic myelogenous leukemia Homo sapiens CVCL_0004
KCL-22 Chronic myelogenous leukemia Homo sapiens CVCL_2091
In-vivo Model In the control mice or ADR mice group, the parental or chemo-resistant K562 cells were infected with LV-shCtrl. In the ADR + shLINC00470 group, the chemo-resistant K562 cells were infected with LV- shLINC00470. These cells were injected, respectively, into these 5-week-old mice subcutaneously.
Gastric cancer [ICD-11: 2B72]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [5]
Response Summary METTL14 inhibits tumor growth and metastasis of Stomach Adenocarcinoma via stabilization of Mutated in multiple advanced cancers 1 (PTEN) mRNA expression. Therefore, METTL14 is a potential biomarker of prognosis and therapeutic targets for Stomach Adenocarcinoma.
Responsed Disease Gastric cancer [ICD-11: 2B72]
Target Regulator Methyltransferase-like 14 (METTL14) WRITER
Target Regulation Up regulation
Cell Process Cell proliferation
Cell migration
Cell invasion
In-vitro Model RGM1 Normal Rattus norvegicus CVCL_0499
HGC-27 Gastric carcinoma Homo sapiens CVCL_1279
BGC-823 Gastric carcinoma Homo sapiens CVCL_3360
AGS Gastric adenocarcinoma Homo sapiens CVCL_0139
In-vivo Model For the purpose of enhancing the overall randomization of the experiment, a random comparison table had been employed. Accordingly, 5-wk-old male nude athymic BALB/c nu/nu mice (Slack, Shanghai, China) were randomly divided into two parts including a control group (NC) and the experimental group METTL14-OE. For developing subcutaneous xeno transplantation model, 5 × 106 HGC-27 cells stably transfected with NC or METTL14 overexpression were subcutaneously incorporated for 5-week-old BALB/c nude mice. The mice experienced euthanasia after 27 days of inoculation and obtained xenografts's mass was obtained. Tumor volume over three days was obtained. To create mouse STAD liver metastasis orthotopic tumor model, 1 × 106 HGC-27 cells under stable transfection with NC or METTL14 overexpression were added to subserosal gastric wall of BALB/c nude mice.
Pancreatic cancer [ICD-11: 2C10]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [8]
Response Summary ALKBH5-mediated m6A demethylation enhanced the stability of KCNK15-AS1. In pancreatic cancer, KCNK15-AS1 bound to KCNK15 to inhibit its translation, and interacted with MDM2 to induce REST ubiquitination, which eventually facilitated Mutated in multiple advanced cancers 1 (PTEN) transcription to inactivate AKT pathway.
Responsed Disease Pancreatic cancer [ICD-11: 2C10]
Target Regulator RNA demethylase ALKBH5 (ALKBH5) ERASER
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Cell proliferation
Cell migration
Epithelial-mesenchymal transition
Cell apoptosis
In-vitro Model BxPC-3 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0186
CFPAC-1 Cystic fibrosis Homo sapiens CVCL_1119
MIA PaCa-2 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0428
PANC-1 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0480
Lung cancer [ICD-11: 2C25]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [3]
Response Summary Bete-elemene exerted the restrictive impacts on the cell growth of lung cancer in vivo and in vitro through targeting METTL3. Bete-elemene contributed to the augmented PTEN expression via suppressing its m6A modification.
Responsed Disease Lung cancer [ICD-11: 2C25]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
In-vitro Model NCI-H1299 Lung large cell carcinoma Homo sapiens CVCL_0060
A-549 Lung adenocarcinoma Homo sapiens CVCL_0023
In-vivo Model Four-week-old BALB/c nude mice were randomly divided into three groups: (1) vector group, (2) vector + Bete-elemene group, and (3) Bete-elemene + METTL3 group. Nude mice were raised in an SPF level animal house and were free to eat and drink. Mice in the vector group were subcutaneously injected with lung cancer cells transfected with empty vector and did not receive Bete-elemene administration, and this group was implemented as the negative control. Following establishing orthotopic xenografts by using A549 or H1299 cells transfected with empty vector, mice in the vector + Bete-elemene group underwent intraperitoneal injection with Bete-elemene once a day. For the subcutaneous transplanted model, A549 or H1299 cells transfected with METTL3-overexpressing vector were inoculated into mice from the Bete-elemene + METTL3 group. Then, mice were intraperitoneally administrated with Bete-elemene once a day. Three weeks later, all the animals were euthanized with CO2. Xenografts were removed and weighted after mice were euthanatized.
Renal cell carcinoma [ICD-11: 2C90]
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [6]
Response Summary Upregulation of METTL14 inhibited ccRCC cells proliferation and migration in vitro. Overexpression of METTL14 increased the m6A enrichment of Mutated in multiple advanced cancers 1 (PTEN), and promoted Pten expression. METTL14-enhanced Pten mRNA stability was dependent on YTHDF1.
Responsed Disease Renal cell carcinoma of kidney [ICD-11: 2C90.0]
Target Regulator Methyltransferase-like 14 (METTL14) WRITER
Target Regulation Up regulation
Pathway Response PI3K-Akt signaling pathway hsa04151
Experiment 2 Reporting the m6A-centered Disease Response [6]
Response Summary Upregulation of METTL14 inhibited ccRCC cells proliferation and migration in vitro. Overexpression of METTL14 increased the m6A enrichment of Mutated in multiple advanced cancers 1 (PTEN), and promoted Pten expression. METTL14-enhanced Pten mRNA stability was dependent on YTHDF1.
Responsed Disease Renal cell carcinoma of kidney [ICD-11: 2C90.0]
Target Regulator YTH domain-containing family protein 1 (YTHDF1) READER
Target Regulation Up regulation
Pathway Response PI3K-Akt signaling pathway hsa04151
Acute ischemic stroke [ICD-11: 8B11]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [9]
Response Summary YTHDC1 promoted Mutated in multiple advanced cancers 1 (PTEN) mRNA degradation to increase Akt phosphorylation, thus facilitating neuronal survival in particular after ischemia, modulating m6A reader YTHDC1 provide a potential therapeutic target for ischemic stroke.
Responsed Disease Acute ischemic stroke [ICD-11: 8B11]
Target Regulator YTH domain-containing protein 1 (YTHDC1) READER
Target Regulation Down regulation
In-vitro Model HEK293T Normal Homo sapiens CVCL_0063
In-vivo Model Male SD rats weighing 200-250 g were anesthetized using 4% isoflurane in 70% N2O and 30% O2 with a mask. A midline incision was made in the neck, the left external carotid artery (ECA) was carefully exposed and dissected, a monofilament nylon suture with a diameter of about 0.22 mm was inserted from the ECA into the internal carotid artery, and the left middle cerebral artery (MCA) was blocked. After occlusion for 90 minutes, the suture was removed for reperfusion, and ECA was ligated to close the wound. Sham-operated rats underwent the same surgery except for suture insertion. Rats were maintained on top of a warming pad (RWD, 69003) during the above procedures. The breathing machine was used to monitor the respiration of rats. The rats were returned to a heated cage during the recovery phase with free access to food and water.
Pulmonary hypertension [ICD-11: BB01]
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [4]
Response Summary METTL3/YTHDF2/Mutated in multiple advanced cancers 1 (PTEN) axis exerts a significant role in hypoxia induced PASMCs proliferation, providing a novel therapeutic target for hypoxic pulmonary hypertension.
Responsed Disease Pulmonary hypertension due to lung disease or hypoxia [ICD-11: BB01.2]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Cell apoptosis
In-vitro Model PASMC cell line (Pulmonary artery smooth muscle cell)
In-vivo Model 10 rats were divided into control and HPH group. In detail, 5 rats of the hypoxia groups were exposed to hypoxia (10%O2) chamber (AiPu XBS-02B, China) for 4 weeks. In addition, 5 rats of control group were kept under normoxic conditions (21% O2) for 4 weeks. Rats were housed in standard polypropylene cages under controlled photocycle (12 h light/12 h dark) under 22-25 ℃ temperature.
Experiment 2 Reporting the m6A-centered Disease Response [4]
Response Summary METTL3/YTHDF2/Mutated in multiple advanced cancers 1 (PTEN) axis exerts a significant role in hypoxia induced PASMCs proliferation, providing a novel therapeutic target for hypoxic pulmonary hypertension.
Responsed Disease Pulmonary hypertension due to lung disease or hypoxia [ICD-11: BB01.2]
Target Regulator YTH domain-containing family protein 2 (YTHDF2) READER
Target Regulation Down regulation
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Cell apoptosis
In-vitro Model PASMC cell line (Pulmonary artery smooth muscle cell)
In-vivo Model 10 rats were divided into control and HPH group. In detail, 5 rats of the hypoxia groups were exposed to hypoxia (10%O2) chamber (AiPu XBS-02B, China) for 4 weeks. In addition, 5 rats of control group were kept under normoxic conditions (21% O2) for 4 weeks. Rats were housed in standard polypropylene cages under controlled photocycle (12 h light/12 h dark) under 22-25 ℃ temperature.
Chronic kidney disease [ICD-11: GB61]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [7]
Response Summary METTL14-regulated PI3K/Akt signaling pathway via Mutated in multiple advanced cancers 1 (PTEN) affected HDAC5-mediated EMT of renal tubular cells in diabetic kidney disease.
Responsed Disease Chronic kidney disease [ICD-11: GB61.Z]
Target Regulator Methyltransferase-like 14 (METTL14) WRITER
Target Regulation Down regulation
Pathway Response PI3K-Akt signaling pathway hsa04151
Cell Process Epithelial-mesenchymal transition
In-vitro Model HK-2 [Human kidney] Normal Homo sapiens CVCL_0302
In-vivo Model Twenty mice were randomly divided into three groups: normal mice group (N), diabetic mice group (DM), and diabetic mice administrated with TSA group (DM + TSA).
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
RNA modification
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00409
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00410
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00446
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 214 (MIR214)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00510
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target hsa-mir-18a
Crosstalk relationship A-to-I → m6A
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00411
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00412
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00447
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 214 (MIR214)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00511
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target hsa-mir-18a
Crosstalk relationship A-to-I → m6A
m6A Regulator: Methyltransferase-like 14 (METTL14)
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00413
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00414
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00448
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 214 (MIR214)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00512
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target hsa-mir-18a
Crosstalk relationship A-to-I → m6A
m6A Regulator: RNA demethylase ALKBH5 (ALKBH5)
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00415
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00416
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target MicroRNA 21 (MIR21)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00449
Epigenetic Regulator Double-stranded RNA-specific editase 1 (ADARB1)
Regulated Target MicroRNA 214 (MIR214)
Crosstalk relationship A-to-I → m6A
Crosstalk ID: M6ACROT00513
Epigenetic Regulator Interferon-inducible protein 4 (ADAR1)
Regulated Target hsa-mir-18a
Crosstalk relationship A-to-I → m6A
DNA modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT02148
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
Drug Metformin
Crosstalk ID: M6ACROT02161
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 3B (DNMT3B)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
Drug Metformin
Crosstalk ID: M6ACROT02174
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
Drug Osimertinib
Crosstalk ID: M6ACROT02187
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 3B (DNMT3B)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
Drug Osimertinib
Histone modification
m6A Regulator: YTH domain-containing protein 2 (YTHDC2)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03043
Epigenetic Regulator Polycomb Repressive Complex 2 (PRC2)
Regulated Target Histone H3 lysine 27 trimethylation (H3K27me3)
Crosstalk relationship m6A → Histone modification
Disease Skin cancer
m6A Regulator: YTH domain-containing family protein 2 (YTHDF2)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03221
Epigenetic Regulator Histone-lysine N-methyltransferase EZH2 (EZH2)
Regulated Target Histone H3 lysine 27 trimethylation (H3K27me3)
Crosstalk relationship Histone modification → m6A
Disease Brain cancer
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03384
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Lung cancer
Drug Gefitinib
Crosstalk ID: M6ACROT03397
Regulated Target Histone H3 lysine 4 monomethylation (H3K4me1)
Crosstalk relationship Histone modification → m6A
Disease Lung cancer
Drug Gefitinib
m6A Regulator: Methyltransferase-like 14 (METTL14)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03501
Regulated Target Histone H3 lysine 18 lactylation (H3K18la)
Crosstalk relationship Histone modification → m6A
Disease Gastric cancer
Non-coding RNA
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05287
Epigenetic Regulator Long intergenic non-protein coding RNA 470 (LINC00470)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship ncRNA → m6A
Disease Gastric cancer
Crosstalk ID: M6ACROT05364
Epigenetic Regulator Long intergenic non-protein coding RNA 470 (LINC00470)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship ncRNA → m6A
Disease Chronic myeloid leukaemia
m6A Regulator: YTH domain-containing family protein 2 (YTHDF2)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05288
Epigenetic Regulator Long intergenic non-protein coding RNA 470 (LINC00470)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship ncRNA → m6A
Disease Gastric cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00375)
Mutated in multiple advanced cancers 1 (PTEN)
Adenosine-to-Inosine editing (A-to-I)
In total 28 m6A sequence/site(s) in this target gene
mod ID: A2ISITE004325 Click to Show/Hide the Full List
mod site chr10:87871594-87871595:+ [18]
Sequence GCCTCCGCCTCCTGGGTTCAAGCAATTCTCTTGCCGCAGCC
Transcript ID List ENST00000371953.8; ENST00000462694.1
External Link RMBase: RNA-editing_site_17372
mod ID: A2ISITE004326 Click to Show/Hide the Full List
mod site chr10:87871598-87871599:+ [18]
Sequence CCGCCTCCTGGGTTCAAGCAATTCTCTTGCCGCAGCCTCCC
Transcript ID List ENST00000371953.8; ENST00000462694.1
External Link RMBase: RNA-editing_site_17373
mod ID: A2ISITE004327 Click to Show/Hide the Full List
mod site chr10:87871633-87871634:+ [19]
Sequence CCTCCCAAGTAGCTGGAATTACAGGCATGCGCCACCACGCC
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17374
mod ID: A2ISITE004328 Click to Show/Hide the Full List
mod site chr10:87871763-87871764:+ [18]
Sequence TGCCTGTCTCAGCCTGCTAAAGTGCTGAGATTACAGGCATG
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17375
mod ID: A2ISITE004329 Click to Show/Hide the Full List
mod site chr10:87873061-87873062:+ [19]
Sequence CAGCGTTGGCAGATTGCTTGAGTCTGGAAGTTCGAGACCAG
Transcript ID List ENST00000371953.8; rmsk_3372605; ENST00000462694.1
External Link RMBase: RNA-editing_site_17376
mod ID: A2ISITE004330 Click to Show/Hide the Full List
mod site chr10:87873094-87873095:+ [18]
Sequence GAGACCAGTCTGGGCAACATAGGCAGACCCTGTCTCTACAA
Transcript ID List ENST00000462694.1; ENST00000371953.8; rmsk_3372605
External Link RMBase: RNA-editing_site_17377
mod ID: A2ISITE004331 Click to Show/Hide the Full List
mod site chr10:87873117-87873118:+ [18]
Sequence CAGACCCTGTCTCTACAAAAAAAAATACAAAAATTAGTCGG
Transcript ID List rmsk_3372605; ENST00000371953.8; ENST00000462694.1
External Link RMBase: RNA-editing_site_17378
mod ID: A2ISITE004332 Click to Show/Hide the Full List
mod site chr10:87873120-87873121:+ [18]
Sequence ACCCTGTCTCTACAAAAAAAAATACAAAAATTAGTCGGGTG
Transcript ID List ENST00000371953.8; rmsk_3372605; ENST00000462694.1
External Link RMBase: RNA-editing_site_17379
mod ID: A2ISITE004333 Click to Show/Hide the Full List
mod site chr10:87873158-87873159:+ [19]
Sequence GTGTTATAGTGCGCATTGGTAGTCCCAGCTACTGAGGAGGC
Transcript ID List rmsk_3372605; ENST00000371953.8; ENST00000462694.1
External Link RMBase: RNA-editing_site_17380
mod ID: A2ISITE004334 Click to Show/Hide the Full List
mod site chr10:87873172-87873173:+ [18]
Sequence ATTGGTAGTCCCAGCTACTGAGGAGGCTGAGGTGGGATCAC
Transcript ID List ENST00000462694.1; ENST00000371953.8; rmsk_3372605
External Link RMBase: RNA-editing_site_17381
mod ID: A2ISITE004335 Click to Show/Hide the Full List
mod site chr10:87873196-87873197:+ [18]
Sequence GGCTGAGGTGGGATCACCTGAGACTGGGACTTTGAGGCTGC
Transcript ID List ENST00000371953.8; rmsk_3372605; ENST00000462694.1
External Link RMBase: RNA-editing_site_17382
mod ID: A2ISITE004336 Click to Show/Hide the Full List
mod site chr10:87887714-87887715:+ [20]
Sequence CACAGGCCCAGAGCTCTAGGAGGGCAGAATGGTTTGTGGCT
Transcript ID List ENST00000371953.8; rmsk_3372624; ENST00000462694.1
External Link RMBase: RNA-editing_site_17383
mod ID: A2ISITE004337 Click to Show/Hide the Full List
mod site chr10:87890927-87890928:+ [20]
Sequence TATTGCCCAGCCTAGCCTCAAACTCCTGGGCTGAAGGAATC
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17384
mod ID: A2ISITE004338 Click to Show/Hide the Full List
mod site chr10:87890953-87890954:+ [20]
Sequence TGGGCTGAAGGAATCCACCCATCTCAGCCTCCCAAAGTGCT
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17385
mod ID: A2ISITE004339 Click to Show/Hide the Full List
mod site chr10:87891199-87891200:+ [21]
Sequence CTCCTTCTCTTGGAATGAAAAGGTATCCTAGGCTCACCTGT
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17386
mod ID: A2ISITE004340 Click to Show/Hide the Full List
mod site chr10:87891611-87891612:+ [20]
Sequence TTGCTTGAGCTCAGGAGTTCAAGACCAACCTGGGCAACATG
Transcript ID List ENST00000371953.8; ENST00000462694.1; rmsk_3372630
External Link RMBase: RNA-editing_site_17387
mod ID: A2ISITE004341 Click to Show/Hide the Full List
mod site chr10:87891629-87891630:+ [20]
Sequence TCAAGACCAACCTGGGCAACATGATGAAACCTTGTCTTTAC
Transcript ID List ENST00000371953.8; rmsk_3372630; ENST00000462694.1
External Link RMBase: RNA-editing_site_17388
mod ID: A2ISITE004342 Click to Show/Hide the Full List
mod site chr10:87891635-87891636:+ [20]
Sequence CCAACCTGGGCAACATGATGAAACCTTGTCTTTACAAAAAA
Transcript ID List ENST00000371953.8; rmsk_3372630; ENST00000462694.1
External Link RMBase: RNA-editing_site_17389
mod ID: A2ISITE004343 Click to Show/Hide the Full List
mod site chr10:87891637-87891638:+ [20]
Sequence AACCTGGGCAACATGATGAAACCTTGTCTTTACAAAAAATT
Transcript ID List ENST00000371953.8; ENST00000462694.1; rmsk_3372630
External Link RMBase: RNA-editing_site_17390
mod ID: A2ISITE004344 Click to Show/Hide the Full List
mod site chr10:87891684-87891685:+ [20]
Sequence GCATGGTGGCATGTGCTTGTATTCCCAGCTACTCAGGAGGC
Transcript ID List ENST00000462694.1; ENST00000371953.8; rmsk_3372630
External Link RMBase: RNA-editing_site_17391
mod ID: A2ISITE004345 Click to Show/Hide the Full List
mod site chr10:87891694-87891695:+ [20]
Sequence ATGTGCTTGTATTCCCAGCTACTCAGGAGGCTGAGGTGGGA
Transcript ID List ENST00000462694.1; ENST00000371953.8; rmsk_3372630
External Link RMBase: RNA-editing_site_17392
mod ID: A2ISITE004346 Click to Show/Hide the Full List
mod site chr10:87891698-87891699:+ [20]
Sequence GCTTGTATTCCCAGCTACTCAGGAGGCTGAGGTGGGAGGAT
Transcript ID List ENST00000462694.1; ENST00000371953.8; rmsk_3372630
External Link RMBase: RNA-editing_site_17393
mod ID: A2ISITE004347 Click to Show/Hide the Full List
mod site chr10:87891720-87891721:+ [20]
Sequence GAGGCTGAGGTGGGAGGATCACCTGAGCCCAGGAGGTCAAG
Transcript ID List rmsk_3372630; ENST00000462694.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17394
mod ID: A2ISITE004348 Click to Show/Hide the Full List
mod site chr10:87907473-87907474:+ [21]
Sequence GTAATTTTGTTACTGTGATAATATATTTTATATATATGTGT
Transcript ID List rmsk_3372651; ENST00000371953.8
External Link RMBase: RNA-editing_site_17395
mod ID: A2ISITE004349 Click to Show/Hide the Full List
mod site chr10:87909322-87909323:+ [19]
Sequence TTTATTTACTTATTTTTTGAAATAGCATCTGGCTCTGTTGC
Transcript ID List ENST00000371953.8
External Link RMBase: RNA-editing_site_17396
mod ID: A2ISITE004350 Click to Show/Hide the Full List
mod site chr10:87930808-87930809:+ [21]
Sequence ACAAGTTTTTAAGCAAATGTATTAGCTCTAATTGCATACAC
Transcript ID List ENST00000498703.1; ENST00000371953.8
External Link RMBase: RNA-editing_site_17397
mod ID: A2ISITE004351 Click to Show/Hide the Full List
mod site chr10:87940181-87940182:+ [18]
Sequence GGTTGGGCACGGTGGCTCATACCTATATTCCCAGCACTTTG
Transcript ID List ENST00000371953.8; rmsk_3372703
External Link RMBase: RNA-editing_site_17398
mod ID: A2ISITE004352 Click to Show/Hide the Full List
mod site chr10:87947839-87947840:+ [21]
Sequence GCGTAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCA
Transcript ID List ENST00000371953.8; rmsk_3372713
External Link RMBase: RNA-editing_site_17399
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004732 Click to Show/Hide the Full List
mod site chr10:87864050-87864051:+ [22]
Sequence ATTTCCAGGGCTGGGAACGCCGGAGAGTTGGTCTCTCCCCT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m5C_site_5620
N6-methyladenosine (m6A)
In total 50 m6A sequence/site(s) in this target gene
mod ID: M6ASITE001224 Click to Show/Hide the Full List
mod site chr10:87864117-87864118:+ [1]
Sequence GGCGGCTGGCACATCCAGGGACCCGGGCCGGTTTTAAACCT
Motif Score 3.622404762
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109375
mod ID: M6ASITE001225 Click to Show/Hide the Full List
mod site chr10:87864467-87864468:+ [23]
Sequence CTTCAGCCACAGGCTCCCAGACATGACAGCCATCATCAAAG
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; AML
Seq Type List MAZTER-seq; miCLIP
Transcript ID List ENST00000371953.8; ENST00000487939.1; ENST00000462694.1
External Link RMBase: m6A_site_109376
mod ID: M6ASITE001226 Click to Show/Hide the Full List
mod site chr10:87864503-87864504:+ [23]
Sequence CAAAGAGATCGTTAGCAGAAACAAAAGGAGATATCAAGAGG
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000462694.1; ENST00000487939.1; ENST00000371953.8; ENST00000618586.1
External Link RMBase: m6A_site_109377
mod ID: M6ASITE001227 Click to Show/Hide the Full List
mod site chr10:87864544-87864545:+ [24]
Sequence ATGGATTCGACTTAGACTTGACCTGTATCCATTTCTGCGGC
Motif Score 2.839113095
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000487939.1; ENST00000371953.8; ENST00000462694.1; ENST00000618586.1
External Link RMBase: m6A_site_109378
mod ID: M6ASITE001228 Click to Show/Hide the Full List
mod site chr10:87876527-87876528:+ [1]
Sequence TAAGAATTTAGTATTACAGGACTCAATCAGGGAACTGATTT
Motif Score 4.065041667
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: m6A_site_109379
mod ID: M6ASITE001229 Click to Show/Hide the Full List
mod site chr10:87894036-87894037:+ [23]
Sequence GTACTCAGATATTTATCCAAACATTATTGCTATGGGATTTC
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000462694.1; ENST00000371953.8
External Link RMBase: m6A_site_109380
mod ID: M6ASITE001230 Click to Show/Hide the Full List
mod site chr10:87894087-87894088:+ [23]
Sequence ACTTGAAGGCGTATACAGGAACAATATTGATGATGTAGTAA
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000462694.1
External Link RMBase: m6A_site_109381
mod ID: M6ASITE001231 Click to Show/Hide the Full List
mod site chr10:87925541-87925542:+ [23]
Sequence TTCAAAGCATAAAAACCATTACAAGATATACAATCTGTAAG
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000498703.1
External Link RMBase: m6A_site_109382
mod ID: M6ASITE001232 Click to Show/Hide the Full List
mod site chr10:87933105-87933106:+ [23]
Sequence CCAATGGCTAAGTGAAGATGACAATCATGTTGCAGCAATTC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000498703.1
External Link RMBase: m6A_site_109383
mod ID: M6ASITE001233 Click to Show/Hide the Full List
mod site chr10:87933149-87933150:+ [1]
Sequence GTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCA
Motif Score 3.373380952
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000371953.8; ENST00000498703.1
External Link RMBase: m6A_site_109384
mod ID: M6ASITE001234 Click to Show/Hide the Full List
mod site chr10:87933178-87933179:+ [23]
Sequence ATGATATGTGCATATTTATTACATCGGGGCAAATTTTTAAA
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000498703.1; ENST00000371953.8
External Link RMBase: m6A_site_109385
mod ID: M6ASITE001235 Click to Show/Hide the Full List
mod site chr10:87933202-87933203:+ [23]
Sequence CGGGGCAAATTTTTAAAGGCACAAGAGGCCCTAGATTTCTA
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000498703.1; ENST00000371953.8
External Link RMBase: m6A_site_109386
mod ID: M6ASITE001236 Click to Show/Hide the Full List
mod site chr10:87933243-87933244:+ [23]
Sequence TGGGGAAGTAAGGACCAGAGACAAAAAGGTAAGTTATTTTT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000498703.1
External Link RMBase: m6A_site_109387
mod ID: M6ASITE001237 Click to Show/Hide the Full List
mod site chr10:87945821-87945822:+ [25]
Sequence CTGGAAACTTTGGTTTTGGGACCCAGGAACACATTGATCTG
Motif Score 3.622404762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000371953.8; ENST00000395256.2
External Link RMBase: m6A_site_109388
mod ID: M6ASITE001238 Click to Show/Hide the Full List
mod site chr10:87952211-87952212:+ [23]
Sequence ACCAGTGGCACTGTTGTTTCACAAGATGATGTTTGAAACTA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000472832.2; ENST00000371953.8
External Link RMBase: m6A_site_109389
mod ID: M6ASITE001239 Click to Show/Hide the Full List
mod site chr10:87957911-87957912:+ [23]
Sequence ATTCCTCCAATTCAGGACCCACACGACGGGAAGACAAGTTC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000472832.2
External Link RMBase: m6A_site_109390
mod ID: M6ASITE001240 Click to Show/Hide the Full List
mod site chr10:87957924-87957925:+ [23]
Sequence AGGACCCACACGACGGGAAGACAAGTTCATGTACTTTGAGT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000472832.2; ENST00000371953.8
External Link RMBase: m6A_site_109391
mod ID: M6ASITE001241 Click to Show/Hide the Full List
mod site chr10:87957993-87957994:+ [23]
Sequence TATCAAAGTAGAGTTCTTCCACAAACAGAACAAGATGCTAA
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000472832.2; ENST00000371953.8
External Link RMBase: m6A_site_109392
mod ID: M6ASITE001242 Click to Show/Hide the Full List
mod site chr10:87960920-87960921:+ [23]
Sequence TGTTTCACTTTTGGGTAAATACATTCTTCATACCAGGACCA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000472832.2
External Link RMBase: m6A_site_109393
mod ID: M6ASITE001243 Click to Show/Hide the Full List
mod site chr10:87961026-87961027:+ [23]
Sequence TATAGAGCGTGCAGATAATGACAAGGAATATCTAGTACTTA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8; ENST00000472832.2
External Link RMBase: m6A_site_109394
mod ID: M6ASITE001244 Click to Show/Hide the Full List
mod site chr10:87961083-87961084:+ [23]
Sequence TCTTGACAAAGCAAATAAAGACAAAGCCAACCGATACTTTT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000472832.2; ENST00000371953.8
External Link RMBase: m6A_site_109395
mod ID: M6ASITE001245 Click to Show/Hide the Full List
mod site chr10:87965301-87965302:+ [23]
Sequence TCTAGGTGAAGCTGTACTTCACAAAAACAGTAGAGGAGCCG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109396
mod ID: M6ASITE001246 Click to Show/Hide the Full List
mod site chr10:87965355-87965356:+ [23]
Sequence CTAGCAGTTCAACTTCTGTAACACCAGATGTTAGTGACAAT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109397
mod ID: M6ASITE001247 Click to Show/Hide the Full List
mod site chr10:87965497-87965498:+ [23]
Sequence TTTTTATCAAGAGGGATAAAACACCATGAAAATAAACTTGA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109398
mod ID: M6ASITE001248 Click to Show/Hide the Full List
mod site chr10:87965512-87965513:+ [24]
Sequence ATAAAACACCATGAAAATAAACTTGAATAAACTGAAAATGG
Motif Score 2.627720238
Cell/Tissue List CD8T; A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109399
mod ID: M6ASITE001249 Click to Show/Hide the Full List
mod site chr10:87965522-87965523:+ [1]
Sequence ATGAAAATAAACTTGAATAAACTGAAAATGGACCTTTTTTT
Motif Score 2.627720238
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109400
mod ID: M6ASITE001250 Click to Show/Hide the Full List
mod site chr10:87965559-87965560:+ [23]
Sequence TTTTTTTTAATGGCAATAGGACATTGTGTCAGATTACCAGT
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109401
mod ID: M6ASITE001251 Click to Show/Hide the Full List
mod site chr10:87965642-87965643:+ [23]
Sequence TATACATCCACAGGGTTTTGACACTTGTTGTCCAGTTGAAA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109402
mod ID: M6ASITE001252 Click to Show/Hide the Full List
mod site chr10:87965710-87965711:+ [23]
Sequence TACCTTTTTGTGTCAAAAGGACATTTAAAATTCAATTAGGA
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109403
mod ID: M6ASITE001253 Click to Show/Hide the Full List
mod site chr10:87965897-87965898:+ [26]
Sequence ACCCCTTTGCACTTGTGGCAACAGATAAGTTTGCAGTTGGC
Motif Score 2.173910714
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109404
mod ID: M6ASITE001254 Click to Show/Hide the Full List
mod site chr10:87965945-87965946:+ [23]
Sequence GGTTTCCGAAGGGTTTTGCTACATTCTAATGCATGTATTCG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109405
mod ID: M6ASITE001255 Click to Show/Hide the Full List
mod site chr10:87966585-87966586:+ [26]
Sequence AATTTTCAATTTGAGATTCTACAGTAAGCGTTTTTTTTCTT
Motif Score 2.078666667
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109406
mod ID: M6ASITE001256 Click to Show/Hide the Full List
mod site chr10:87966836-87966837:+ [25]
Sequence ATGCTGCACACAAAAAAAAGACATTTGATTTTTCAGTAGAA
Motif Score 2.897386905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109407
mod ID: M6ASITE001257 Click to Show/Hide the Full List
mod site chr10:87966865-87966866:+ [25]
Sequence TTTTCAGTAGAAATTGTCCTACATGTGCTTTATTGATTTGC
Motif Score 2.078666667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109408
mod ID: M6ASITE001258 Click to Show/Hide the Full List
mod site chr10:87967059-87967060:+ [23]
Sequence CATACGATTTTAAGCGGAGTACAACTACTATTGTAAAGCTA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109409
mod ID: M6ASITE001259 Click to Show/Hide the Full List
mod site chr10:87967150-87967151:+ [23]
Sequence CAAATTATACCTTCACCTTGACATTTGAATATCCAGCCATT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T; AML
Seq Type List MAZTER-seq; miCLIP
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109410
mod ID: M6ASITE001260 Click to Show/Hide the Full List
mod site chr10:87967257-87967258:+ [23]
Sequence TGGTCTGACCTAGTTAATTTACAAATACAGATTGAATAGGA
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109411
mod ID: M6ASITE001261 Click to Show/Hide the Full List
mod site chr10:87967502-87967503:+ [23]
Sequence TTAAATTGGTAAAGTTAGAGACAACTATTCTAACACCTCAC
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109412
mod ID: M6ASITE001262 Click to Show/Hide the Full List
mod site chr10:87967514-87967515:+ [23]
Sequence AGTTAGAGACAACTATTCTAACACCTCACCATTGAAATTTA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T; AML
Seq Type List MAZTER-seq; miCLIP
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109413
mod ID: M6ASITE001263 Click to Show/Hide the Full List
mod site chr10:87967630-87967631:+ [23]
Sequence TATAAATATTGTTCTTTGTTACAATTTCGGGCACCGCATAT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109414
mod ID: M6ASITE001264 Click to Show/Hide the Full List
mod site chr10:87967681-87967682:+ [23]
Sequence CTTTATTGTTCCAATATGTAACATGGAGGGCCAGGTCATAA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109415
mod ID: M6ASITE001265 Click to Show/Hide the Full List
mod site chr10:87967708-87967709:+ [23]
Sequence GGGCCAGGTCATAAATAATGACATTATAATGGGCTTTTGCA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109416
mod ID: M6ASITE001266 Click to Show/Hide the Full List
mod site chr10:87967814-87967815:+ [23]
Sequence GTTTTTGAGAAGCCTTGCTTACATTTTATGGTGTAGTCATT
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109417
mod ID: M6ASITE001267 Click to Show/Hide the Full List
mod site chr10:87967946-87967947:+ [25]
Sequence ATTTGACAAGAATTGCTATGACTGAAAGGTTTTCGAGTCCT
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109418
mod ID: M6ASITE001268 Click to Show/Hide the Full List
mod site chr10:87968077-87968078:+ [26]
Sequence TTTTGGATGTGCAGCAGCTTACATGTCTGAAGTTACTTGAA
Motif Score 2.07285119
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109419
mod ID: M6ASITE001269 Click to Show/Hide the Full List
mod site chr10:87968229-87968230:+ [26]
Sequence TCACCATTCTTTGCTGTGGCACAGGTTATAAACTTAAGTGG
Motif Score 2.830589286
Cell/Tissue List brain; kidney; liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109420
mod ID: M6ASITE001270 Click to Show/Hide the Full List
mod site chr10:87968240-87968241:+ [25]
Sequence TGCTGTGGCACAGGTTATAAACTTAAGTGGAGTTTACCGGC
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109421
mod ID: M6ASITE001271 Click to Show/Hide the Full List
mod site chr10:87968711-87968712:+ [23]
Sequence ATTTGTTATTGTGTTTGTTAACAACCCTTTATCTCTTAGTG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000371953.8
External Link RMBase: m6A_site_109422
mod ID: M6ASITE094741 Click to Show/Hide the Full List
mod site KQ090021.1:79940-79941:+ [27]
Sequence CGGCGGCGGCACATCCAGGGACCCGGGCCGGTTTTAAACCT
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HEK293T; HepG2; H1A; H1B; A549; LCLs; MM6; Jurkat; HEK293A-TOA; TREX; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000645317.1; ENST00000644628.1
External Link RMBase: m6A_site_881922
mod ID: M6ASITE094742 Click to Show/Hide the Full List
mod site KQ090021.1:79957-79958:+ [27]
Sequence GGGACCCGGGCCGGTTTTAAACCTCCCGTCCGCCGCCGCCG
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HEK293T; HepG2; H1A; H1B; A549; LCLs; MM6; Jurkat; HEK293A-TOA; TREX; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000644628.1; ENST00000645317.1
External Link RMBase: m6A_site_881923