m6A-centered Disease Response Information
General Information of the Disease (ID: M6ADIS0002)
Name |
Solid tumour/cancer
|
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---|---|---|---|---|---|
ICD |
ICD-11: 2A00-2F9Z
|
Full List of Target Gene(s) of This m6A-centered Disease Response
ATP-dependent translocase ABCB1 (ABCB1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
Response Summary | m6A induced ERR-Gamma confers chemoresistance of cancer cells through upregulation of ATP-dependent translocase ABCB1 (ABCB1) and CPT1B. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Pathway Response | ABC transporters | hsa02010 | ||
Fatty acid metabolism | hsa01212 | |||
Fatty acid degradation | hsa00071 | |||
Cell Process | Fatty acid oxidation | |||
In-vitro Model | A-549 | Lung adenocarcinoma | Homo sapiens | CVCL_0023 |
Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
MCF-7 | Invasive breast carcinoma | Homo sapiens | CVCL_0031 | |
MDA-MB-231 | Breast adenocarcinoma | Homo sapiens | CVCL_0062 | |
In-vivo Model | Both sh-control and sh- ERRγ HepG2/ADR cells (5 × 106 per mouse, n=5 for each group) were diluted in 200uL PBS + 200 uL Matrigel (BD Biosciences) and subcutaneously injected into immunodeficient mice. | |||
Carnitine O-palmitoyltransferase 1, muscle isoform (CPT1B)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
Response Summary | m6A induced ERR-Gamma confers chemoresistance of cancer cells through upregulation of ABCB1 and Carnitine O-palmitoyltransferase 1, muscle isoform (CPT1B). | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Pathway Response | ABC transporters | hsa02010 | ||
Fatty acid metabolism | hsa01212 | |||
Fatty acid degradation | hsa00071 | |||
Cell Process | Fatty acid oxidation | |||
In-vitro Model | A-549 | Lung adenocarcinoma | Homo sapiens | CVCL_0023 |
Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
MCF-7 | Invasive breast carcinoma | Homo sapiens | CVCL_0031 | |
MDA-MB-231 | Breast adenocarcinoma | Homo sapiens | CVCL_0062 | |
In-vivo Model | Both sh-control and sh- ERRγ HepG2/ADR cells (5 × 106 per mouse, n=5 for each group) were diluted in 200uL PBS + 200 uL Matrigel (BD Biosciences) and subcutaneously injected into immunodeficient mice. | |||
Cellular tumor antigen p53 (TP53/p53)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | METTL3 significantly decreased m6A level, restoring Cellular tumor antigen p53 (TP53/p53) activation and inhibiting cellular transformation phenotypes in the arsenite-transformed cells. m6A downregulated the expression of the positive p53 regulator, PRDM2, through the YTHDF2-promoted decay of PRDM2 mRNAs. m6A upregulated the expression of the negative p53 regulator, YY1 and MDM2 through YTHDF1-stimulated translation of YY1 and MDM2 mRNA. This study further sheds light on the mechanisms of arsenic carcinogenesis via RNA epigenetics. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Responsed Drug | Arsenite | Phase 2 | ||
Target Regulator | YTH domain-containing family protein 1 (YTHDF1) | READER | ||
Target Regulation | Down regulation | |||
Pathway Response | p53 signaling pathway | hsa04115 | ||
In-vitro Model | HaCaT | Normal | Homo sapiens | CVCL_0038 |
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | METTL3 significantly decreased m6A level, restoring Cellular tumor antigen p53 (TP53/p53) activation and inhibiting cellular transformation phenotypes in the arsenite-transformed cells. m6A downregulated the expression of the positive p53 regulator, PRDM2, through the YTHDF2-promoted decay of PRDM2 mRNAs. m6A upregulated the expression of the negative p53 regulator, YY1 and MDM2 through YTHDF1-stimulated translation of YY1 and MDM2 mRNA. This study further sheds light on the mechanisms of arsenic carcinogenesis via RNA epigenetics. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Responsed Drug | Arsenite | Phase 2 | ||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | p53 signaling pathway | hsa04115 | ||
In-vitro Model | HaCaT | Normal | Homo sapiens | CVCL_0038 |
E3 ubiquitin-protein ligase NEDD4-like (NEDD4L)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
Response Summary | FTO deletion inhibited arsenic-induced tumorigenesis. Epidermis-specific FTO deletion prevented skin tumorigenesis induced by arsenic and UVB irradiation. E3 ubiquitin-protein ligase NEDD4-like (NEDD4L) was identified as the m6A-modified gene target of FTO. Arsenic stabilizes FTO protein through inhibiting p62-mediated selective autophagy. FTO-mediated dysregulation of mRNA m6A methylation as an epitranscriptomic mechanism to promote arsenic tumorigenicity. Arsenic suppresses p62 expression by downregulating the NF-Kappa-B pathway to upregulate FTO. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cellular Processes, Transport and catabolism | |||
Cell autophagy | ||||
In-vitro Model | HaCaT | Normal | Homo sapiens | CVCL_0038 |
HEK293T | Normal | Homo sapiens | CVCL_0063 | |
HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 | |
MEF (Mouse embryonic fibroblasts) | ||||
In-vivo Model | As cells (5 million) in Matrigel or As-T (1 million) cells in PBS with or without gene manipulations were injected subcutaneously into the right flanks of female mice (6-8 weeks of age). For treatment with CS1 or CS2, As-T cells (1 million) in PBS were injected subcutaneously into the right flanks of 6-week-old female nude mice. | |||
ELAV-like protein 1 (HuR/ELAVL1)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [4] | |||
Response Summary | METTL14 and ALKBH5 determine the m6A status of target genes by controlling each other's expression and by inhibiting m6A reader YTHDF3 (YTH N 6-methyladenosine RNA binding protein 3), which blocks RNA demethylase activity. ALKBH5/METTL14 constitute a positive feedback loop with RNA stability factor ELAV-like protein 1 (HuR/ELAVL1) to regulate the stability of target transcripts. This study unveils a previously undefined role for m6A in cancer and shows that the collaboration among writers-erasers-readers sets up the m6A threshold to ensure the stability of progrowth/proliferation-specific genes, and protumorigenic stimulus. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Methyltransferase-like 14 (METTL14) | WRITER | ||
Target Regulation | Up regulation | |||
Cell Process | RNA stability | |||
Cell apoptosis | ||||
In-vitro Model | BT-549 | Invasive breast carcinoma | Homo sapiens | CVCL_1092 |
DU145 | Prostate carcinoma | Homo sapiens | CVCL_0105 | |
HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 | |
Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
MCF-7 | Invasive breast carcinoma | Homo sapiens | CVCL_0031 | |
MDA-MB-231 | Breast adenocarcinoma | Homo sapiens | CVCL_0062 | |
MDA-MB-468 | Breast adenocarcinoma | Homo sapiens | CVCL_0419 | |
In-vivo Model | For tumor xenograft studies, MDA-MB-231 cells transfected with scrambled-siRNA or METTL14-siRNA or ALKBH5-siRNA (2 × 106) were mixed with Matrigel and injected subcutaneously in the flank of 6-week-old female athymic nude mice. | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [4] | |||
Response Summary | METTL14 and ALKBH5 determine the m6A status of target genes by controlling each other's expression and by inhibiting m6A reader YTHDF3 (YTH N 6-methyladenosine RNA binding protein 3), which blocks RNA demethylase activity. ALKBH5/METTL14 constitute a positive feedback loop with RNA stability factor ELAV-like protein 1 (HuR/ELAVL1) to regulate the stability of target transcripts. This study unveils a previously undefined role for m6A in cancer and shows that the collaboration among writers-erasers-readers sets up the m6A threshold to ensure the stability of progrowth/proliferation-specific genes, and protumorigenic stimulus. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | RNA demethylase ALKBH5 (ALKBH5) | ERASER | ||
Target Regulation | Up regulation | |||
Cell Process | RNA stability | |||
Cell apoptosis | ||||
In-vitro Model | BT-549 | Invasive breast carcinoma | Homo sapiens | CVCL_1092 |
DU145 | Prostate carcinoma | Homo sapiens | CVCL_0105 | |
HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 | |
Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
MCF-7 | Invasive breast carcinoma | Homo sapiens | CVCL_0031 | |
MDA-MB-231 | Breast adenocarcinoma | Homo sapiens | CVCL_0062 | |
MDA-MB-468 | Breast adenocarcinoma | Homo sapiens | CVCL_0419 | |
In-vivo Model | For tumor xenograft studies, MDA-MB-231 cells transfected with scrambled-siRNA or METTL14-siRNA or ALKBH5-siRNA (2 × 106) were mixed with Matrigel and injected subcutaneously in the flank of 6-week-old female athymic nude mice. | |||
Fatty acid synthase (FASN)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [5] | |||
Response Summary | FTO regulates hepatic lipogenesis via FTO-dependent m6A demethylation in Fatty acid synthase (FASN) mRNA and indicate the critical role of FTO-mediated lipid metabolism in the survival of HepG2 cells. This study provides novel insights into a unique RNA epigenetic mechanism by which FTO mediates hepatic lipid accumulation through m6 A modification and indicates that FTO could be a potential target for obesity-related diseases and cancer. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Down regulation | |||
Cell Process | Deficiency of lipid accumulation | |||
Cellular apoptosis | ||||
In-vitro Model | Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 |
Kinesin-like protein KIF26B (KIF26B)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
Response Summary | Ginsenoside Rh2 reduces m6A RNA methylation via downregulating KIF26B expression in some cancer cells. KIF26B elevates m6A RNA methylation via enhancing ZC3H13/CBLL1 nuclear localization. KIF26B-SRF forms a positive feedback loop facilitating tumor growth. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Zinc finger CCCH domain-containing protein 13 (ZC3H13) | WRITER | ||
In-vitro Model | SK-LMS-1 | Vulvar leiomyosarcoma | Homo sapiens | CVCL_0628 |
MDA-MB-157 | Breast carcinoma | Homo sapiens | CVCL_0618 | |
MCF-7 | Invasive breast carcinoma | Homo sapiens | CVCL_0031 | |
In-vivo Model | BALB/c nude mice (5 weeks old) were purchased from the Beijing HFK Bioscience Co. Ltd. 2×106 cells (50 uL) were mixed with 50 uL Matrigel (BD Biosciences, San Jose, CA, USA) were injected subcutaneously in the rear flank fat pad of the nude mice (N = 6, per group). | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [6] | |||
Response Summary | Ginsenoside Rh2 reduces m6A RNA methylation via downregulating KIF26B expression in some cancer cells. KIF26B elevates m6A RNA methylation via enhancing ZC3H13/CBLL1 nuclear localization. KIF26B-SRF forms a positive feedback loop facilitating tumor growth. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | E3 ubiquitin-protein ligase Hakai (CBLL1) | WRITER | ||
In-vitro Model | SK-LMS-1 | Vulvar leiomyosarcoma | Homo sapiens | CVCL_0628 |
MDA-MB-157 | Breast carcinoma | Homo sapiens | CVCL_0618 | |
MCF-7 | Invasive breast carcinoma | Homo sapiens | CVCL_0031 | |
In-vivo Model | BALB/c nude mice (5 weeks old) were purchased from the Beijing HFK Bioscience Co. Ltd. 2×106 cells (50 uL) were mixed with 50 uL Matrigel (BD Biosciences, San Jose, CA, USA) were injected subcutaneously in the rear flank fat pad of the nude mice (N = 6, per group). | |||
Meltrin-beta (ADAM19)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
Response Summary | In this review, we discuss the specific roles of m6A "writers", "erasers", and "readers" in normal physiology and how their altered expression promotes tumorigenesis. We also describe the potential of exploiting the aberrant expression of these enzymes for cancer diagnosis, prognosis, and the development of novel therapies. The abnormal expression of m6A regulatory enzymes affects m6A abundance and consequently dysregulates the expression of tumor suppressor genes and oncogenes, including MYC, SOCS2, Meltrin-beta (ADAM19), and PTEN. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Mutated in multiple advanced cancers 1 (PTEN)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
Response Summary | In this review, we discuss the specific roles of m6A "writers", "erasers", and "readers" in normal physiology and how their altered expression promotes tumorigenesis. We also describe the potential of exploiting the aberrant expression of these enzymes for cancer diagnosis, prognosis, and the development of novel therapies. The abnormal expression of m6A regulatory enzymes affects m6A abundance and consequently dysregulates the expression of tumor suppressor genes and oncogenes, including MYC, SOCS2, ADAM19, and Mutated in multiple advanced cancers 1 (PTEN). | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Myc proto-oncogene protein (MYC)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
Response Summary | In this review, we discuss the specific roles of m6A "writers", "erasers", and "readers" in normal physiology and how their altered expression promotes tumorigenesis. We also describe the potential of exploiting the aberrant expression of these enzymes for cancer diagnosis, prognosis, and the development of novel therapies. The abnormal expression of m6A regulatory enzymes affects m6A abundance and consequently dysregulates the expression of tumor suppressor genes and oncogenes, including Myc proto-oncogene protein (MYC), SOCS2, ADAM19, and PTEN. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [8] | |||
Response Summary | Wnt/Beta-catenin-mediated FTO downregulation and underscored the role of m6A modifications of Myc proto-oncogene protein (MYC) mRNA in regulating tumor cell glycolysis and growth. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Down regulation | |||
Pathway Response | Wnt signaling pathway | hsa04310 | ||
Central carbon metabolism in cancer | hsa05230 | |||
Glycolysis / Gluconeogenesis | hsa00010 | |||
Cell Process | Glycolysis | |||
In-vitro Model | NCI-H322 | Minimally invasive lung adenocarcinoma | Homo sapiens | CVCL_1556 |
HEK293T | Normal | Homo sapiens | CVCL_0063 | |
In-vivo Model | Mice were randomized into several groups. For the subcutaneous implantation model, 1?×?106 cells were injected subcutaneously into the flank regions of female BALB/c nude mice (4-5 weeks). For lung colonization assays, 1 × 106 cells were injected into the tail vein of female NOD/SCID mice (6-7 weeks), and 6 weeks later the lung was removed and fixed with 10% formalin. | |||
PR domain zinc finger protein 2 (PRDM2)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | METTL3 significantly decreased m6A level, restoring p53 activation and inhibiting cellular transformation phenotypes in the arsenite-transformed cells. m6A downregulated the expression of the positive p53 regulator, PR domain zinc finger protein 2 (PRDM2), through the YTHDF2-promoted decay of PRDM2 mRNAs. m6A upregulated the expression of the negative p53 regulator, YY1 and MDM2 through YTHDF1-stimulated translation of YY1 and MDM2 mRNA. This study further sheds light on the mechanisms of arsenic carcinogenesis via RNA epigenetics. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Responsed Drug | Arsenite | Phase 2 | ||
Target Regulator | YTH domain-containing family protein 1 (YTHDF1) | READER | ||
Target Regulation | Down regulation | |||
Pathway Response | p53 signaling pathway | hsa04115 | ||
In-vitro Model | HaCaT | Normal | Homo sapiens | CVCL_0038 |
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | METTL3 significantly decreased m6A level, restoring p53 activation and inhibiting cellular transformation phenotypes in the arsenite-transformed cells. m6A downregulated the expression of the positive p53 regulator, PR domain zinc finger protein 2 (PRDM2), through the YTHDF2-promoted decay of PRDM2 mRNAs. m6A upregulated the expression of the negative p53 regulator, YY1 and MDM2 through YTHDF1-stimulated translation of YY1 and MDM2 mRNA. This study further sheds light on the mechanisms of arsenic carcinogenesis via RNA epigenetics. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Responsed Drug | Arsenite | Phase 2 | ||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | p53 signaling pathway | hsa04115 | ||
In-vitro Model | HaCaT | Normal | Homo sapiens | CVCL_0038 |
Pyruvate dehydrogenase kinase isoform 4 (PDK4)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [9] | |||
Response Summary | m6A regulates glycolysis of cancer cells through Pyruvate dehydrogenase kinase isoform 4 (PDK4). Knockdown of Mettl3 significantly attenuated m6A antibody enriched PDK4 mRNA in Huh7 cells. It reveals that m6A regulates glycolysis of cancer cells through PDK4. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Glycerolipid metabolism | hsa00561 | ||
Cell Process | Glycolysis | |||
In-vitro Model | SiHa | Cervical squamous cell carcinoma | Homo sapiens | CVCL_0032 |
MDA-MB-231 | Breast adenocarcinoma | Homo sapiens | CVCL_0062 | |
Huh-7 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0336 | |
Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 | |
In-vivo Model | As to the subcutaneous transplanted model, WT Vec, Mettl3 Mut/-+vec, WTPDK4, Mettl3 Mut/-+vecPDK4 cells (2 × 10 6 per mouse, n = 10 for each group) were diluted in 200 uL normal medium + 200 uL Matrigel (BD Biosciences) and subcutaneously injected into immunodeficient mice to investigate tumor growth. | |||
Sequestosome-1 (SQSTM1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
Response Summary | FTO deletion inhibited arsenic-induced tumorigenesis. Epidermis-specific FTO deletion prevented skin tumorigenesis induced by arsenic and UVB irradiation. NEDD4L was identified as the m6A-modified gene target of FTO. Arsenic stabilizes FTO protein through inhibiting Sequestosome-1 (SQSTM1)-mediated selective autophagy. FTO-mediated dysregulation of mRNA m6A methylation as an epitranscriptomic mechanism to promote arsenic tumorigenicity. Arsenic suppresses p62 expression by downregulating the NF-Kappa-B pathway to upregulate FTO. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
Target Regulation | Down regulation | |||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cellular Processes, Transport and catabolism | |||
Cell autophagy | ||||
In-vitro Model | HaCaT | Normal | Homo sapiens | CVCL_0038 |
HEK293T | Normal | Homo sapiens | CVCL_0063 | |
HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 | |
MEF (Mouse embryonic fibroblasts) | ||||
In-vivo Model | As cells (5 million) in Matrigel or As-T (1 million) cells in PBS with or without gene manipulations were injected subcutaneously into the right flanks of female mice (6-8 weeks of age). For treatment with CS1 or CS2, As-T cells (1 million) in PBS were injected subcutaneously into the right flanks of 6-week-old female nude mice. | |||
Serine-protein kinase ATM (ATM)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [10] | |||
Response Summary | m6A modification regulates ATM mRNA metabolism and ATM downstream signaling, which illustrates the importance of m6A modification-related molecules for being used as therapeutic targets in DNA damage-related diseases. METTL3 disrupts the ATM stability via m6A modification, thereby affecting the DNA-damage response. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Down regulation | |||
Pathway Response | Homologous recombination | hsa03440 | ||
p53 signaling pathway | hsa04115 | |||
In-vitro Model | BJAB | Burkitt lymphoma | Homo sapiens | CVCL_5711 |
Raji | EBV-related Burkitt lymphoma | Homo sapiens | CVCL_0511 | |
Serum response factor (SRF)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [11] | |||
Response Summary | IGF2BP1 promotes Serum response factor (SRF) and SRF target genes at the post-transcriptional level suggesting it as a post-transcriptional enhancer of SRF itself as well as SRF-dependent gene expression in cancer cells. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | READER | ||
Target Regulation | Up regulation | |||
Cell Process | Cell growth | |||
Cell invasion | ||||
In-vitro Model | A-549 | Lung adenocarcinoma | Homo sapiens | CVCL_0023 |
Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
K-562 | Chronic myelogenous leukemia | Homo sapiens | CVCL_0004 | |
Suppressor of cytokine signaling 2 (SOCS2)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [7] | |||
Response Summary | In this review, we discuss the specific roles of m6A "writers", "erasers", and "readers" in normal physiology and how their altered expression promotes tumorigenesis. We also describe the potential of exploiting the aberrant expression of these enzymes for cancer diagnosis, prognosis, and the development of novel therapies. The abnormal expression of m6A regulatory enzymes affects m6A abundance and consequently dysregulates the expression of tumor suppressor genes and oncogenes, including MYC, Suppressor of cytokine signaling 2 (SOCS2), ADAM19, and PTEN. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Transforming growth factor beta-1 proprotein (TGFB1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [12] | |||
Response Summary | The expression of Transforming growth factor beta-1 proprotein (TGFB1) was up-regulated, while self-stimulated expression of TGFbeta1 was suppressed in METTL3Mut/- cells. m6A performed multi-functional roles in TGFbeta1 expression and EMT modulation, suggesting the critical roles of m6A in cancer progression regulation. Snail, which was down-regulated in Mettl3Mut/- cells, was a key factor responding to TGF-Beta-1-induced EMT. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Adherens junction | hsa04520 | ||
Cell Process | Epithelial-mesenchymal transition | |||
In-vitro Model | HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 |
Ubiquilin-4 (UBQLN4)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [13] | |||
Response Summary | The role of Ubiquilin-4 (UBQLN4) in pan-cancer for the first time. Based on the comprehensive analysis of multiomics data, we identified UBQLN4 as a potential molecular biomarker for prognosis and treatment in oncotherapy. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Pathway Response | PI3K-Akt signaling pathway | hsa04151 | ||
mTOR signaling pathway | hsa04150 | |||
Cell Process | Microsatellite instability | |||
Mismatch repair | ||||
In-vitro Model | U-2 OS cell line (Human osteosarcoma cells) | |||
Zinc finger protein SNAI1 (SNAI1)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [12] | |||
Response Summary | The expression of TGFbeta1 was up-regulated, while self-stimulated expression of TGFbeta1 was suppressed in METTL3Mut/- cells. m6A performed multi-functional roles in TGFbeta1 expression and EMT modulation, suggesting the critical roles of m6A in cancer progression regulation. Zinc finger protein SNAI1 (SNAI1), which was down-regulated in Mettl3Mut/- cells, was a key factor responding to TGF-Beta-1-induced EMT. | |||
Responsed Disease | Solid tumour/cancer [ICD-11: 2A00-2F9Z] | |||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Adherens junction | hsa04520 | ||
Cell Process | Epithelial-mesenchymal transition | |||
In-vitro Model | HeLa | Endocervical adenocarcinoma | Homo sapiens | CVCL_0030 |
References