General Information of the m6A Target Gene (ID: M6ATAR00555)
Target Name Pyruvate dehydrogenase kinase isoform 4 (PDK4)
Synonyms
Pyruvate dehydrogenase kinase isoform 4
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Gene Name PDK4
Chromosomal Location 7q21.3
Family PDK/BCKDK protein kinase family
Function
Kinase that plays a key role in regulation of glucose and fatty acid metabolism and homeostasis via phosphorylation of the pyruvate dehydrogenase subunits PDHA1 and PDHA2. This inhibits pyruvate dehydrogenase activity, and thereby regulates metabolite flux through the tricarboxylic acid cycle, down-regulates aerobic respiration and inhibits the formation of acetyl-coenzyme A from pyruvate. Inhibition of pyruvate dehydrogenase decreases glucose utilization and increases fat metabolism in response to prolonged fasting and starvation. Plays an important role in maintaining normal blood glucose levels under starvation, and is involved in the insulin signaling cascade. Via its regulation of pyruvate dehydrogenase activity, plays an important role in maintaining normal blood pH and in preventing the accumulation of ketone bodies under starvation. In the fed state, mediates cellular responses to glucose levels and to a high-fat diet. Regulates both fatty acid oxidation and de novo fatty acid biosynthesis. Plays a role in the generation of reactive oxygen species. Protects detached epithelial cells against anoikis. Plays a role in cell proliferation via its role in regulating carbohydrate and fatty acid metabolism.
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Gene ID 5166
Uniprot ID
PDK4_HUMAN
HGNC ID
HGNC:8812
Ensembl Gene ID
ENSG00000004799
KEGG ID
hsa:5166
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
PDK4 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line LX2 cell line Homo sapiens
Treatment: shMETTL3 LX2 cells
Control: shLuc LX2 cells
GSE207909
Regulation
logFC: -1.03E+01
p-value: 3.59E-12
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between PDK4 and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 5.02E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary m6A regulates glycolysis of cancer cells through Pyruvate dehydrogenase kinase isoform 4 (PDK4). Knockdown of Mettl3 significantly attenuated m6A antibody enriched PDK4 mRNA in Huh7 cells. It reveals that m6A regulates glycolysis of cancer cells through PDK4.
Target Regulation Up regulation
Responsed Disease Solid tumour/cancer ICD-11: 2A00-2F9Z
Pathway Response Glycerolipid metabolism hsa00561
Cell Process Glycolysis
In-vitro Model SiHa Cervical squamous cell carcinoma Homo sapiens CVCL_0032
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
HeLa Endocervical adenocarcinoma Homo sapiens CVCL_0030
In-vivo Model As to the subcutaneous transplanted model, WT Vec, Mettl3 Mut/-+vec, WTPDK4, Mettl3 Mut/-+vecPDK4 cells (2 × 10 6 per mouse, n = 10 for each group) were diluted in 200 uL normal medium + 200 uL Matrigel (BD Biosciences) and subcutaneously injected into immunodeficient mice to investigate tumor growth.
Solid tumour/cancer [ICD-11: 2A00-2F9Z]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary m6A regulates glycolysis of cancer cells through Pyruvate dehydrogenase kinase isoform 4 (PDK4). Knockdown of Mettl3 significantly attenuated m6A antibody enriched PDK4 mRNA in Huh7 cells. It reveals that m6A regulates glycolysis of cancer cells through PDK4.
Responsed Disease Solid tumour/cancer [ICD-11: 2A00-2F9Z]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Pathway Response Glycerolipid metabolism hsa00561
Cell Process Glycolysis
In-vitro Model SiHa Cervical squamous cell carcinoma Homo sapiens CVCL_0032
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
HeLa Endocervical adenocarcinoma Homo sapiens CVCL_0030
In-vivo Model As to the subcutaneous transplanted model, WT Vec, Mettl3 Mut/-+vec, WTPDK4, Mettl3 Mut/-+vecPDK4 cells (2 × 10 6 per mouse, n = 10 for each group) were diluted in 200 uL normal medium + 200 uL Matrigel (BD Biosciences) and subcutaneously injected into immunodeficient mice to investigate tumor growth.
References
Ref 1 N(6)-methyladenosine regulates glycolysis of cancer cells through PDK4. Nat Commun. 2020 May 22;11(1):2578. doi: 10.1038/s41467-020-16306-5.