General Information of the Disease (ID: M6ADIS0110)
Name
Osteoarthritis
ICD
ICD-11: FA05
Full List of Target Gene(s) of This m6A-centered Disease Response
Collagenase 3 (MMP13)
In total 2 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [2]
Response Summary METTL3 has a functional role in mediates osteoarthritis progression by regulating NF-Kappa-B signaling and ECM synthesis in chondrocytes that shed insight on developing preventive and curative strategies for OA by focusing on METTL3 and mRNA methylation. Silencing of METTL3 promotes degradation of extracellular matrix (ECM) by reducing the expression of Collagenase 3 (MMP13) and Coll X, elevating the expression of Aggrecan and Coll II.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Cell Process Inflammatory response and apoptosis
In-vitro Model ATDC-5 Mouse teratocarcinoma Mus musculus CVCL_3894
In-vivo Model The right knee joint of each OA mouse was injected with 1U of type VII collagenase over two consecutive days to obtain experimental OA joint, and the control mice received the equal volume of physiological saline.
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene [3]
Response Summary METTL3 is involved in OA probably by regulating the inflammatory response. METTL3 overexpression affects extracellular matrix degradation in OA by adjusting the balance between TIMPs and Collagenase 3 (MMP13).
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Cell Process Inflammatory response
In-vitro Model SW1353 Primary central chondrosarcoma Homo sapiens CVCL_0543
Interstitial collagenase (MMP1)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [3]
Response Summary METTL3 is involved in OA probably by regulating the inflammatory response. METTL3 overexpression affects extracellular matrix degradation in OA by adjusting the balance between TIMPs and Interstitial collagenase (MMP1).
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Cell Process Inflammatory response
In-vitro Model SW1353 Primary central chondrosarcoma Homo sapiens CVCL_0543
Metalloproteinase inhibitor 1 (TIMP-1)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [3]
Response Summary METTL3 is involved in OA probably by regulating the inflammatory response. METTL3 overexpression affects extracellular matrix degradation in OA by adjusting the balance between Metalloproteinase inhibitor 1 (TIMP-1) and MMPs.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Cell Process Inflammatory response
In-vitro Model SW1353 Primary central chondrosarcoma Homo sapiens CVCL_0543
Metalloproteinase inhibitor 2 (TIMP2)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [3]
Response Summary METTL3 is involved in OA probably by regulating the inflammatory response. METTL3 overexpression affects extracellular matrix degradation in OA by adjusting the balance between Metalloproteinase inhibitor 2 (TIMP2) and MMPs.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Cell Process Inflammatory response
In-vitro Model SW1353 Primary central chondrosarcoma Homo sapiens CVCL_0543
NAD-dependent protein deacetylase sirtuin-1 (SIRT1)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [6]
Response Summary m6A-mediated LINC00680 regulates the proliferation and ECM degradation of chondrocytes through LINC00680/m6A/NAD-dependent protein deacetylase sirtuin-1 (SIRT1) mRNA axis. METTL3-mediated LINC00680 accelerates osteoarthritis(OA) progression, which provides novel understanding of the role of m6A and lncRNA in OA.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
In-vitro Model Chondrocytes (Chondrocytes were isolated from human cartilage and cultured)
Prostaglandin G/H synthase 2 (Coll X/PTGS2)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [2]
Response Summary METTL3 has a functional role in mediates osteoarthritis progression by regulating NF-Kappa-B signaling and ECM synthesis in chondrocytes that shed insight on developing preventive and curative strategies for OA by focusing on METTL3 and mRNA methylation. Silencing of METTL3 promotes degradation of extracellular matrix (ECM) by reducing the expression of MMP-13 and Prostaglandin G/H synthase 2 (Coll X/PTGS2), elevating the expression of Aggrecan and Coll II.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Cell Process Inflammatory response and apoptosis
In-vitro Model ATDC-5 Mouse teratocarcinoma Mus musculus CVCL_3894
In-vivo Model The right knee joint of each OA mouse was injected with 1U of type VII collagenase over two consecutive days to obtain experimental OA joint, and the control mice received the equal volume of physiological saline.
Thioredoxin (TXN/SASP)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [7]
Response Summary In osteoarthritis METTL3-mediated m6A modification decreased the expression of Thioredoxin (TXN/SASP), an E-1 enzyme crucial for the formation of autophagosomes, by attenuating its RNA stability. Silencing METTL3 enhanced autophagic flux and inhibited SASP expression in OA-FLS.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Pathway Response Autophagy hsa04140
Cell Process Cellular senescence
Cell autophagy
In-vitro Model C-28/I2 Normal Homo sapiens CVCL_0187
FLS (Rat fibroblast synovial cell line)
In-vivo Model Mice were anaesthetized with isoflurane supplied in a mouse anaesthesia apparatus, followed with joint surgery on the right joint by sectioning the medial meniscotibial ligament.
Ubiquitin-like modifier-activating enzyme ATG7 (ATG7)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [7]
Response Summary In osteoarthritis METTL3-mediated m6A modification decreased the expression of autophagy-related 7, an E-1 enzyme crucial for the formation of autophagosomes, by attenuating its RNA stability. Silencing METTL3 enhanced autophagic flux and inhibited Ubiquitin-like modifier-activating enzyme ATG7 (ATG7) expression in OA-FLS.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Pathway Response Autophagy hsa04140
Cell Process Cellular senescence
Cell autophagy
In-vitro Model C-28/I2 Normal Homo sapiens CVCL_0187
FLS (Rat fibroblast synovial cell line)
In-vivo Model Mice were anaesthetized with isoflurane supplied in a mouse anaesthesia apparatus, followed with joint surgery on the right joint by sectioning the medial meniscotibial ligament.
Long intergenic non-protein coding RNA 680 (LINC00680)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [6]
Response Summary m6A-mediated Long intergenic non-protein coding RNA 680 (LINC00680) regulates the proliferation and ECM degradation of chondrocytes through LINC00680/m6A/SIRT1 mRNA axis. METTL3-mediated LINC00680 accelerates osteoarthritis(OA) progression, which provides novel understanding of the role of m6A and lncRNA in OA.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
In-vitro Model Chondrocytes (Chondrocytes were isolated from human cartilage and cultured)
AC008440.5 (AC008)
In total 1 item(s) under this target gene
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene [8]
Response Summary FTO-mediated N6-methyladenosine demethylation downregulated AC008440.5 (AC008) transcription, while lower FTO expression led to upregulation of AC008 transcription in OA.
Responsed Disease Osteoarthritis [ICD-11: FA05]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Target Regulation Down regulation
In-vitro Model Chondrocytes (Chondrocytes were isolated from human cartilage and cultured)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Disease
In total 9 item(s) under this disease
Crosstalk ID: M6ACROT05084
m6A Regulator Synaptic functional regulator FMR1 (FMR1)
m6A Target Disintegrin and metalloproteinase domain-containing protein 8 (ADAM8)
Epigenetic Regulator FAS antisense RNA 1 (FAS-AS1)
Regulated Target Fragile X messenger ribonucleoprotein 1 (FMR1)
Crosstalk relationship ncRNA → m6A
Crosstalk ID: M6ACROT05161
m6A Regulator Methyltransferase-like 3 (METTL3)
m6A Target NACHT, LRR and PYD domains-containing protein 3 (NLRP3)
Epigenetic Regulator hsa-miR-1208
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship ncRNA → m6A
Crosstalk ID: M6ACROT05584
m6A Regulator Methyltransferase-like 3 (METTL3)
m6A Target Long intergenic non-protein coding RNA 680 (LINC00680)
Epigenetic Regulator Long intergenic non-protein coding RNA 680 (LINC00680)
Regulated Target NAD-dependent protein deacetylase sirtuin-1 (SIRT1)
Crosstalk relationship m6A → ncRNA
Crosstalk ID: M6ACROT05619
m6A Regulator Fat mass and obesity-associated protein (FTO)
m6A Target AC008440.5 (AC008)
Epigenetic Regulator AC008440.5 (AC008)
Regulated Target hsa-miR-328-3p
Crosstalk relationship m6A → ncRNA
Crosstalk ID: M6ACROT05642
m6A Regulator YTH domain-containing family protein 2 (YTHDF2)
m6A Target Circ_RERE
Epigenetic Regulator Circ_RERE
Regulated Target hsa-miR-195-5p
Crosstalk relationship m6A → ncRNA
Drug ICG-001
Crosstalk ID: M6ACROT05685
m6A Regulator Fat mass and obesity-associated protein (FTO)
m6A Target pri-miR-3591
Epigenetic Regulator MicroRNA 3591
Regulated Target Protein kinase AMP-activated catalytic subunit alpha 2 (PRKAA2)
Crosstalk relationship m6A → ncRNA
Crosstalk ID: M6ACROT05691
m6A Regulator Wilms tumor 1-associating protein (WTAP)
m6A Target hsa-miR-92b-5p
Epigenetic Regulator hsa-miR-92b-5p
Regulated Target Metalloproteinase inhibitor 4 (TIMP4)
Crosstalk relationship m6A → ncRNA
Crosstalk ID: M6ACROT05742
m6A Regulator RNA demethylase ALKBH5 (ALKBH5)
m6A Target Heparan Sulfate-Glucosamine 3-Sulfotransferase 3B1 Intronic Transcript 1 (HS3ST3B1-IT1)
Epigenetic Regulator Heparan Sulfate-Glucosamine 3-Sulfotransferase 3B1 Intronic Transcript 1 (HS3ST3B1-IT1)
Regulated Target Heparan sulfate-glucosamine 3-sulfotransferase 3B1 (HS3ST3B1)
Crosstalk relationship m6A → ncRNA
Crosstalk ID: M6ACROT05772
m6A Regulator Fat mass and obesity-associated protein (FTO)
m6A Target hsa-miR-515-5p
Epigenetic Regulator hsa-miR-515-5p
Regulated Target Toll-like receptor 4 (TLR4)
Crosstalk relationship m6A → ncRNA
References
Ref 1 Association of the ABCG2 C421A polymorphism with prostate cancer risk and survival. BJU Int. 2008 Dec;102(11):1694-9. doi: 10.1111/j.1464-410X.2008.07913.x. Epub 2008 Aug 14.
Ref 2 METTL3 promotes experimental osteoarthritis development by regulating inflammatory response and apoptosis in chondrocyte. Biochem Biophys Res Commun. 2019 Aug 13;516(1):22-27. doi: 10.1016/j.bbrc.2019.05.168. Epub 2019 Jun 8.
Ref 3 METTL3 involves the progression of osteoarthritis probably by affecting ECM degradation and regulating the inflammatory response. Life Sci. 2021 Aug 1;278:119528. doi: 10.1016/j.lfs.2021.119528. Epub 2021 Apr 21.
Ref 4 Symbiopolyol, a VCAM-1 inhibitor from a symbiotic dinoflagellate of the jellyfish Mastigias papua. J Nat Prod. 2010 Jul 23;73(7):1318-22. doi: 10.1021/np100221k.
Ref 5 Modulation of CD44 Activity by A6-Peptide. Front Immunol. 2015 Mar 30;6:135. doi: 10.3389/fimmu.2015.00135. eCollection 2015.
Ref 6 N(6)-methyladenosine (m(6)A) methyltransferase METTL3-mediated LINC00680 accelerates osteoarthritis through m(6)A/SIRT1 manner. Cell Death Discov. 2022 May 2;8(1):240. doi: 10.1038/s41420-022-00890-0.
Ref 7 METTL3-mediated m(6)A modification of ATG7 regulates autophagy-GATA4 axis to promote cellular senescence and osteoarthritis progression. Ann Rheum Dis. 2022 Jan;81(1):87-99. doi: 10.1136/annrheumdis-2021-221091. Epub 2021 Oct 27.
Ref 8 m(6)A-mediated upregulation of AC008 promotes osteoarthritis progression through the miR-328-3p?AQP1/ANKH axis. Exp Mol Med. 2021 Nov;53(11):1723-1734. doi: 10.1038/s12276-021-00696-7. Epub 2021 Nov 4.
Ref 9 Functional regulation of Na+-dependent neutral amino acid transporter ASCT2 by S-nitrosothiols and nitric oxide in Caco-2 cells. FEBS Lett. 2005 Apr 25;579(11):2499-506. doi: 10.1016/j.febslet.2005.03.065.
Ref 10 Clinical pipeline report, company report or official report of Zentalis Pharmaceuticals.
Ref 11 Structure-based optimization of potent and selective inhibitors of the tyrosine kinase erythropoietin producing human hepatocellular carcinoma receptor B4 (EphB4). J Med Chem. 2009 Oct 22;52(20):6433-46. doi: 10.1021/jm9009444.
Ref 12 Clinical pipeline report, company report or official report of Apollomics.
Ref 13 Pyrrolo[2,3-d]pyrimidines active as Btk inhibitors. Expert Opin Ther Pat. 2017 Dec;27(12):1305-1318. doi: 10.1080/13543776.2017.1355908. Epub 2017 Jul 20.
Ref 14 Transferrin receptor targeting nanomedicine delivering wild-type p53 gene sensitizes pancreatic cancer to gemcitabine therapy. Cancer Gene Ther. 2013 Apr;20(4):222-8. doi: 10.1038/cgt.2013.9. Epub 2013 Mar 8.
Ref 15 Possible involvement of multiple human cytochrome P450 isoforms in the liver metabolism of propofol. Br J Anaesth. 1998 Jun;80(6):788-95. doi: 10.1093/bja/80.6.788.
Ref 16 Genetic variants of ABCC10, a novel tenofovir transporter, are associated with kidney tubular dysfunction. J Infect Dis. 2011 Jul 1;204(1):145-53. doi: 10.1093/infdis/jir215.
Ref 17 Antitumor activity of HM781-36B, a highly effective pan-HER inhibitor in erlotinib-resistant NSCLC and other EGFR-dependent cancer models. Int J Cancer. 2012 May 15;130(10):2445-54. doi: 10.1002/ijc.26276. Epub 2011 Aug 24.
Ref 18 AXL receptor tyrosine kinase as a promising anti-cancer approach: functions, molecular mechanisms and clinical applications. Mol Cancer. 2019 Nov 4;18(1):153. doi: 10.1186/s12943-019-1090-3.