m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00568)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
LINC00680
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Methyltransferase-like 3 (METTL3) [WRITER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | m6A-mediated Long intergenic non-protein coding RNA 680 (LINC00680) regulates the proliferation and ECM degradation of chondrocytes through LINC00680/m6A/SIRT1 mRNA axis. METTL3-mediated LINC00680 accelerates osteoarthritis(OA) progression, which provides novel understanding of the role of m6A and lncRNA in OA. | |||
| Target Regulation | Up regulation | |||
| Responsed Disease | Osteoarthritis | ICD-11: FA05 | ||
| In-vitro Model | Chondrocytes (Chondrocytes were isolated from human cartilage and cultured) | |||
Osteoarthritis [ICD-11: FA05]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | m6A-mediated Long intergenic non-protein coding RNA 680 (LINC00680) regulates the proliferation and ECM degradation of chondrocytes through LINC00680/m6A/SIRT1 mRNA axis. METTL3-mediated LINC00680 accelerates osteoarthritis(OA) progression, which provides novel understanding of the role of m6A and lncRNA in OA. | |||
| Responsed Disease | Osteoarthritis [ICD-11: FA05] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| In-vitro Model | Chondrocytes (Chondrocytes were isolated from human cartilage and cultured) | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05584 | ||
| Epigenetic Regulator | Long intergenic non-protein coding RNA 680 (LINC00680) | |
| Regulated Target | NAD-dependent protein deacetylase sirtuin-1 (SIRT1) | |
| Crosstalk relationship | m6A → ncRNA | |
| Disease | Osteoarthritis | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00568)
| In total 7 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE001517 | Click to Show/Hide the Full List | ||
| mod site | chr6:57954263-57954264:- | [2] | |
| Sequence | CCTGCCTCAGCCTCCCCAGTAGCTGGGATTATAGGCACGTG | ||
| Transcript ID List | ENST00000418765.6; ENST00000450081.5; ENST00000636069.1; ENST00000399751.6; ENST00000637710.1; ENST00000418368.1 | ||
| External Link | RMBase: RNA-editing_site_116964 | ||
| mod ID: A2ISITE001518 | Click to Show/Hide the Full List | ||
| mod site | chr6:57954333-57954334:- | [2] | |
| Sequence | TGCCCAGACTGGAGGGCAATAGTGTAATCTAGGCTCACTGC | ||
| Transcript ID List | ENST00000636069.1; ENST00000418368.1; ENST00000418765.6; ENST00000637710.1; ENST00000450081.5; ENST00000399751.6 | ||
| External Link | RMBase: RNA-editing_site_116965 | ||
| mod ID: A2ISITE001519 | Click to Show/Hide the Full List | ||
| mod site | chr6:57954837-57954838:- | [2] | |
| Sequence | TGTGATCTCGACTCACTGCAAGCTCCGCCTCCCGGGTGCAC | ||
| Transcript ID List | ENST00000636069.1; ENST00000399751.6; ENST00000418765.6; ENST00000418368.1; ENST00000450081.5; ENST00000637710.1 | ||
| External Link | RMBase: RNA-editing_site_116966 | ||
| mod ID: A2ISITE001520 | Click to Show/Hide the Full List | ||
| mod site | chr6:57956412-57956413:- | [2] | |
| Sequence | CGGGCTCAGGTAATCCTCCCACCTCAGCCTCCCAAATAGTT | ||
| Transcript ID List | ENST00000450081.5; ENST00000637710.1; ENST00000418765.6; ENST00000399751.6; ENST00000418368.1; ENST00000636069.1 | ||
| External Link | RMBase: RNA-editing_site_116967 | ||
| mod ID: A2ISITE001521 | Click to Show/Hide the Full List | ||
| mod site | chr6:57956447-57956448:- | [2] | |
| Sequence | TGGCATGACCTTGCCTCACTACAGACTCCACTTCCCGGGCT | ||
| Transcript ID List | ENST00000399751.6; ENST00000636069.1; ENST00000418765.6; ENST00000418368.1; ENST00000450081.5; ENST00000637710.1 | ||
| External Link | RMBase: RNA-editing_site_116968 | ||
| mod ID: A2ISITE001522 | Click to Show/Hide the Full List | ||
| mod site | chr6:57957741-57957742:- | [2] | |
| Sequence | TGAGCTGAGATCGCACCATTACACTCCAGCCTGGGTGACAA | ||
| Transcript ID List | ENST00000636069.1; ENST00000418368.1; rmsk_1958718; ENST00000637710.1; ENST00000399751.6; ENST00000418765.6; ENST00000450081.5 | ||
| External Link | RMBase: RNA-editing_site_116969 | ||
| mod ID: A2ISITE001523 | Click to Show/Hide the Full List | ||
| mod site | chr6:57958188-57958189:- | [3] | |
| Sequence | TCAAGCAATTTTCCTGCCTCAGCCCTCCAAGTAGCTGGGAC | ||
| Transcript ID List | ENST00000637710.1; ENST00000418368.1; ENST00000636069.1; ENST00000399751.6; ENST00000450081.5; ENST00000418765.6 | ||
| External Link | RMBase: RNA-editing_site_116970 | ||
N6-methyladenosine (m6A)
| In total 38 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE075542 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946139-57946140:- | [4] | |
| Sequence | AAGCTCCCGTATATACATGAACTGAGAAGTGTGTAGAAGAG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000399751.6; ENST00000636069.1; ENST00000450081.5; ENST00000422882.1; ENST00000418368.1; ENST00000637710.1 | ||
| External Link | RMBase: m6A_site_721996 | ||
| mod ID: M6ASITE075543 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946187-57946188:- | [4] | |
| Sequence | CAAGACTCCTTAGTGGTGGAACCTCAGGCATCCATGCAGGA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000450081.5; ENST00000636069.1; ENST00000422882.1; ENST00000399751.6; ENST00000637710.1; ENST00000418368.1 | ||
| External Link | RMBase: m6A_site_721997 | ||
| mod ID: M6ASITE075544 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946203-57946204:- | [4] | |
| Sequence | CTTCTTCACTTAGGGACAAGACTCCTTAGTGGTGGAACCTC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000399751.6; ENST00000418368.1; ENST00000450081.5; ENST00000422882.1; ENST00000637710.1; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_721998 | ||
| mod ID: M6ASITE075545 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946208-57946209:- | [4] | |
| Sequence | AATGACTTCTTCACTTAGGGACAAGACTCCTTAGTGGTGGA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000636069.1; ENST00000422882.1; ENST00000637710.1; ENST00000399751.6; ENST00000418368.1; ENST00000450081.5 | ||
| External Link | RMBase: m6A_site_721999 | ||
| mod ID: M6ASITE075547 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946236-57946237:- | [4] | |
| Sequence | AAGACACAGGCTTTACATAAACAGCTTTAATGACTTCTTCA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000636069.1; ENST00000422882.1; ENST00000450081.5; ENST00000637710.1; ENST00000418368.1; ENST00000399751.6 | ||
| External Link | RMBase: m6A_site_722000 | ||
| mod ID: M6ASITE075548 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946253-57946254:- | [4] | |
| Sequence | GATAACACCCTGTCTCCAAGACACAGGCTTTACATAAACAG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000422882.1; ENST00000399751.6; ENST00000450081.5; ENST00000418368.1; ENST00000637710.1; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722001 | ||
| mod ID: M6ASITE075549 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946458-57946459:- | [4] | |
| Sequence | TGAGGCCTGGCCCCAGGGAAACCAGTGGGGCCTCATCTCCT | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HEK293T; peripheral-blood; HEK293A-TOA; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000450081.5; ENST00000422882.1; ENST00000399751.6; ENST00000636069.1; ENST00000637710.1 | ||
| External Link | RMBase: m6A_site_722002 | ||
| mod ID: M6ASITE075550 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946541-57946542:- | [4] | |
| Sequence | AGAGATGGAAGTTGGAATGGACAAGCCTGCCCTCTCCTCAG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; peripheral-blood; HEK293A-TOA; endometrial; HEC-1-A; AML | ||
| Seq Type List | m6A-seq; MeRIP-seq; miCLIP | ||
| Transcript ID List | ENST00000450081.5; ENST00000636069.1; ENST00000399751.6; ENST00000637710.1; ENST00000422882.1; ENST00000418368.1 | ||
| External Link | RMBase: m6A_site_722003 | ||
| mod ID: M6ASITE075551 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946614-57946615:- | [4] | |
| Sequence | CGGGATCAGAGCACTGAGAAACTCCAGAGGCTTCTGGTTCA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; Huh7; peripheral-blood; HEK293A-TOA; iSLK; TREX; TIME; MSC; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000450081.5; ENST00000637710.1; ENST00000418765.6; ENST00000422882.1; ENST00000636069.1; ENST00000399751.6 | ||
| External Link | RMBase: m6A_site_722004 | ||
| mod ID: M6ASITE075552 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946650-57946651:- | [4] | |
| Sequence | TTCATTGGGAAATCACGGGGACAGAGGAGGAATTCACGGGA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; GM12878; Huh7; peripheral-blood; HEK293A-TOA; iSLK; TREX; MSC; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000422882.1; ENST00000637710.1; ENST00000636069.1; ENST00000418765.6; ENST00000418368.1; ENST00000399751.6; ENST00000450081.5 | ||
| External Link | RMBase: m6A_site_722005 | ||
| mod ID: M6ASITE075553 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946771-57946772:- | [4] | |
| Sequence | TTGAAGAGAGGTTTACCTAAACTTTCCTCCTGGGAGCCTGT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; GM12878; Huh7; peripheral-blood; HEK293A-TOA; iSLK; TREX; TIME; MSC; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000637710.1; ENST00000418368.1; ENST00000418765.6; ENST00000636069.1; ENST00000450081.5; ENST00000422882.1; ENST00000399751.6 | ||
| External Link | RMBase: m6A_site_722006 | ||
| mod ID: M6ASITE075554 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946809-57946810:- | [4] | |
| Sequence | TAGGTAGACAGTTCTTTGGGACTTTTGGGACGCAGCACTTG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; GM12878; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000636069.1; ENST00000399751.6; ENST00000637710.1; ENST00000418765.6; ENST00000422882.1; ENST00000450081.5 | ||
| External Link | RMBase: m6A_site_722007 | ||
| mod ID: M6ASITE075555 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946822-57946823:- | [4] | |
| Sequence | TGAGAGCGCCTCATAGGTAGACAGTTCTTTGGGACTTTTGG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; GM12878; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000422882.1; ENST00000399751.6; ENST00000418368.1; ENST00000637710.1; ENST00000636069.1; ENST00000450081.5; ENST00000418765.6 | ||
| External Link | RMBase: m6A_site_722008 | ||
| mod ID: M6ASITE075556 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946948-57946949:- | [4] | |
| Sequence | GAAGTGCAGGAACAGCACAGACCCAGACGAGGGGATGCAGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000637710.1; ENST00000418368.1; ENST00000399751.6; ENST00000418765.6; ENST00000450081.5; ENST00000636069.1; ENST00000422882.1 | ||
| External Link | RMBase: m6A_site_722009 | ||
| mod ID: M6ASITE075557 | Click to Show/Hide the Full List | ||
| mod site | chr6:57946957-57946958:- | [4] | |
| Sequence | TTATGTTATGAAGTGCAGGAACAGCACAGACCCAGACGAGG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000636069.1; ENST00000418368.1; ENST00000450081.5; ENST00000422882.1; ENST00000637710.1; ENST00000418765.6; ENST00000399751.6 | ||
| External Link | RMBase: m6A_site_722010 | ||
| mod ID: M6ASITE075558 | Click to Show/Hide the Full List | ||
| mod site | chr6:57947008-57947009:- | [4] | |
| Sequence | GTGACTGAGAGCAGTAGAAGACTTGTTGAGCCTTAAGGAAT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; hESCs; fibroblasts; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000450081.5; ENST00000636069.1; ENST00000422882.1; ENST00000399751.6; ENST00000637710.1; ENST00000418765.6; ENST00000418368.1 | ||
| External Link | RMBase: m6A_site_722011 | ||
| mod ID: M6ASITE075559 | Click to Show/Hide the Full List | ||
| mod site | chr6:57947049-57947050:- | [4] | |
| Sequence | TGCACTAAAAAACCAGGCAAACATCTGACTCCCAGGATAAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; hESCs; fibroblasts; A549; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000422882.1; ENST00000636069.1; ENST00000399751.6; ENST00000418765.6; ENST00000450081.5; ENST00000637710.1 | ||
| External Link | RMBase: m6A_site_722012 | ||
| mod ID: M6ASITE075560 | Click to Show/Hide the Full List | ||
| mod site | chr6:57947058-57947059:- | [4] | |
| Sequence | GTATTCACATGCACTAAAAAACCAGGCAAACATCTGACTCC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; hESCs; fibroblasts; A549; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418765.6; ENST00000418368.1; ENST00000422882.1; ENST00000399751.6; ENST00000636069.1; ENST00000450081.5; ENST00000637710.1 | ||
| External Link | RMBase: m6A_site_722013 | ||
| mod ID: M6ASITE075561 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949286-57949287:- | ||
| Sequence | TAGTTCTATCCGTTTAGAGAACCCTGACTAATACACAGGCC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000450081.5; ENST00000399751.6; ENST00000418765.6; ENST00000418368.1; ENST00000637710.1; ENST00000422882.1; rmsk_1958692; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722014 | ||
| mod ID: M6ASITE075562 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949335-57949336:- | ||
| Sequence | TGAGCCAATTCTCCTGATAAACTCACCTTCATATATACATC | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000637710.1; ENST00000399751.6; ENST00000422882.1; ENST00000418765.6; ENST00000450081.5; ENST00000418368.1; ENST00000636069.1; rmsk_1958692 | ||
| External Link | RMBase: m6A_site_722015 | ||
| mod ID: M6ASITE075563 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949374-57949375:- | ||
| Sequence | TGCAGTCGGCCTATTGTGAGACTTCCCCTTGTGATCATGTG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000637710.1; ENST00000399751.6; ENST00000422882.1; ENST00000450081.5; rmsk_1958692; ENST00000636069.1; ENST00000418368.1; ENST00000418765.6 | ||
| External Link | RMBase: m6A_site_722016 | ||
| mod ID: M6ASITE075564 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949417-57949418:- | ||
| Sequence | CTTTGAAGTTTGGGACTCAGACTGGCTTCTTGGCTCCTCAG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000450081.5; ENST00000422882.1; ENST00000637710.1; rmsk_1958692; ENST00000399751.6; ENST00000636069.1; ENST00000418765.6 | ||
| External Link | RMBase: m6A_site_722017 | ||
| mod ID: M6ASITE075565 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949423-57949424:- | ||
| Sequence | CCCTACCTTTGAAGTTTGGGACTCAGACTGGCTTCTTGGCT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000637710.1; rmsk_1958692; ENST00000450081.5; ENST00000399751.6; ENST00000636069.1; ENST00000418765.6; ENST00000422882.1; ENST00000418368.1 | ||
| External Link | RMBase: m6A_site_722018 | ||
| mod ID: M6ASITE075566 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949466-57949467:- | ||
| Sequence | TCCCAGGCCTCTAGCCGCAGACTGAAGGCTGCACTGTGAGC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000422882.1; ENST00000399751.6; ENST00000637710.1; ENST00000450081.5; rmsk_1958692; ENST00000636069.1; ENST00000418765.6 | ||
| External Link | RMBase: m6A_site_722019 | ||
| mod ID: M6ASITE075567 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949512-57949513:- | [4] | |
| Sequence | TTTTTTTTTTGGACTCTTGGACTTACAGCATTGGTTTGCCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000450081.5; ENST00000637710.1; rmsk_1958692; ENST00000399751.6; ENST00000422882.1; ENST00000418765.6; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722020 | ||
| mod ID: M6ASITE075568 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949520-57949521:- | [4] | |
| Sequence | GCTTTTTTTTTTTTTTTTGGACTCTTGGACTTACAGCATTG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000450081.5; ENST00000422882.1; ENST00000637710.1; ENST00000418765.6; rmsk_1958692; ENST00000399751.6; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722021 | ||
| mod ID: M6ASITE075569 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949555-57949556:- | [4] | |
| Sequence | TTCCTGCCCTCGAACATCAGACTCCAAGTTCTTCAGCTTTT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000636069.1; ENST00000637710.1; rmsk_1958692; ENST00000422882.1; ENST00000418765.6; ENST00000418368.1; ENST00000399751.6; ENST00000450081.5 | ||
| External Link | RMBase: m6A_site_722022 | ||
| mod ID: M6ASITE075570 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949562-57949563:- | [4] | |
| Sequence | TGGATGCTTCCTGCCCTCGAACATCAGACTCCAAGTTCTTC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000637710.1; ENST00000422882.1; rmsk_1958692; ENST00000418765.6; ENST00000399751.6; ENST00000450081.5; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722023 | ||
| mod ID: M6ASITE075571 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949620-57949621:- | [4] | |
| Sequence | GCAGAAGTTGGAATGAGCAGACTTGCTGAGTGTTCCAGCCT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HEK293T; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | rmsk_1958692; ENST00000399751.6; ENST00000418368.1; ENST00000418765.6; ENST00000636069.1; ENST00000422882.1; ENST00000450081.5; ENST00000637710.1 | ||
| External Link | RMBase: m6A_site_722024 | ||
| mod ID: M6ASITE075572 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949716-57949717:- | [4] | |
| Sequence | ATTAACATTTTAGTCAGTGGACTGGGAGAGGCACACCCACC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; Huh7; HEK293A-TOA; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418765.6; ENST00000637710.1; ENST00000399751.6; ENST00000636069.1; ENST00000418368.1; ENST00000422882.1; ENST00000450081.5; rmsk_1958692 | ||
| External Link | RMBase: m6A_site_722025 | ||
| mod ID: M6ASITE075573 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949833-57949834:- | [4] | |
| Sequence | TCTTGGGGAGGGTCAAGGAAACAGGCTGTGATGGTTAATAT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HEK293T; Huh7; HEK293A-TOA; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000399751.6; ENST00000418765.6; ENST00000418368.1; ENST00000637710.1; ENST00000422882.1; ENST00000450081.5; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722026 | ||
| mod ID: M6ASITE075574 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949882-57949883:- | [4] | |
| Sequence | GTGAGAGGGCCTTGGGAAAGACTTGGAGGGTTTGGCTTATA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HEK293T; HEK293A-TOA; MSC; TREX; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000422882.1; ENST00000399751.6; ENST00000450081.5; ENST00000636069.1; ENST00000418368.1; ENST00000418765.6; ENST00000637710.1 | ||
| External Link | RMBase: m6A_site_722027 | ||
| mod ID: M6ASITE075575 | Click to Show/Hide the Full List | ||
| mod site | chr6:57949927-57949928:- | [4] | |
| Sequence | GAAGGCTGTGCACCACTGGGACCCAGCAGCAGCTCAGCAGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293T; HEK293A-TOA; MSC; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000418765.6; ENST00000637710.1; ENST00000450081.5; ENST00000422882.1; ENST00000399751.6; ENST00000636069.1 | ||
| External Link | RMBase: m6A_site_722028 | ||
| mod ID: M6ASITE075576 | Click to Show/Hide the Full List | ||
| mod site | chr6:57950000-57950001:- | [4] | |
| Sequence | TCATCTAAAGGCCACCAGGAACACACCTGTAGCCCAGCAAA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HEK293T; HEK293A-TOA | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000636069.1; ENST00000418765.6; ENST00000399751.6; ENST00000422882.1; ENST00000637710.1; ENST00000418368.1; ENST00000450081.5 | ||
| External Link | RMBase: m6A_site_722029 | ||
| mod ID: M6ASITE075577 | Click to Show/Hide the Full List | ||
| mod site | chr6:57950066-57950067:- | [4] | |
| Sequence | TTCCCAAATTTTAAGCTGAAACTAGGATGCATCAAAATTAT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000399751.6; ENST00000637710.1; ENST00000636069.1; ENST00000422882.1; ENST00000450081.5; ENST00000418368.1; ENST00000418765.6 | ||
| External Link | RMBase: m6A_site_722030 | ||
| mod ID: M6ASITE075578 | Click to Show/Hide the Full List | ||
| mod site | chr6:57959070-57959071:- | [4] | |
| Sequence | GACTTGGAAGCAATGTTTGAACAAACTCAAAGAACAGCTGT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000636069.1; ENST00000418765.6; ENST00000399751.6; ENST00000637710.1; ENST00000635948.1; ENST00000450081.5 | ||
| External Link | RMBase: m6A_site_722031 | ||
| mod ID: M6ASITE075579 | Click to Show/Hide the Full List | ||
| mod site | chr6:57961196-57961197:- | [4] | |
| Sequence | CTCAGACGCATCGGGACCGGACCCGCAGCTTGTGGTCACCA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000637710.1; ENST00000418368.1; ENST00000636069.1; ENST00000450081.5; ENST00000399751.6; ENST00000418765.6; ENST00000635948.1 | ||
| External Link | RMBase: m6A_site_722032 | ||
| mod ID: M6ASITE075580 | Click to Show/Hide the Full List | ||
| mod site | chr6:57961201-57961202:- | [4] | |
| Sequence | ACAGGCTCAGACGCATCGGGACCGGACCCGCAGCTTGTGGT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000418368.1; ENST00000399751.6; ENST00000637710.1; ENST00000636069.1; ENST00000418765.6; ENST00000450081.5; ENST00000635948.1 | ||
| External Link | RMBase: m6A_site_722033 | ||
References