m6A-centered Disease Response Information
General Information of the Disease (ID: M6ADIS0009)
Name |
Testicular cancer
|
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ICD |
ICD-11: 2C80
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Full List of Target Gene(s) of This m6A-centered Disease Response
Autophagy protein 5 (ATG5)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
Response Summary | m6A methyltransferase METTL3 regulates autophagy and sensitivity to cisplatin by targeting Autophagy protein 5 (ATG5) in seminoma. The use of autophagy inhibitors 3-MA could reverse the protective effect of METTL3 on TCam-2 cells. | |||
Responsed Disease | Testicular cancer [ICD-11: 2C80] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cellular Processes | |||
Cellular Transport | ||||
Cellular catabolism | ||||
Cell autophagy | ||||
In-vitro Model | Tcam-2/DDP (Cisplatin-resistant TCam-2 cell line) | |||
TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 | |
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
Response Summary | m6A methyltransferase METTL3 regulates autophagy and sensitivity to cisplatin by targeting Autophagy protein 5 (ATG5) in seminoma. The use of autophagy inhibitors 3-MA could reverse the protective effect of METTL3 on TCam-2 cells. | |||
Responsed Disease | Testicular cancer [ICD-11: 2C80] | |||
Responsed Drug | 3-Methyladenine | Investigative | ||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Autophagy | hsa04140 | ||
Cell Process | Cellular Processes | |||
Cellular Transport | ||||
Cellular catabolism | ||||
Cell autophagy | ||||
In-vitro Model | Tcam-2/DDP (Cisplatin-resistant TCam-2 cell line) | |||
TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 | |
Double-strand break repair protein MRE11 (MRE11)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | VIRMA has an oncogenic role in germ cell tumor confirming our previous tissue-based study and is further involved in response to cisplatin by interfering with DNA repair. Enhanced response to cisplatin after VIRMA knockdown was related to significant increase in DNA damage (with higher Gamma-H2AX and GADD45B levels) and downregulation of XLF and Double-strand break repair protein MRE11 (MRE11). | |||
Responsed Disease | Germ cell tumour of testis [ICD-11: 2C80.2] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Protein virilizer homolog (VIRMA) | WRITER | ||
Target Regulation | Up regulation | |||
In-vitro Model | 2102EP | Embryonal carcinoma | Homo sapiens | CVCL_C522 |
NCC-IT | Testicular embryonal carcinoma | Homo sapiens | CVCL_1451 | |
NT2 | Malignant neoplasms | Mus musculus | CVCL_JA57 | |
TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 | |
Histone H2AX (H2AX)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | VIRMA has an oncogenic role in germ cell tumor confirming our previous tissue-based study and is further involved in response to cisplatin by interfering with DNA repair. Enhanced response to cisplatin after VIRMA knockdown was related to significant increase in DNA damage (with higher Histone H2AX (H2AX) and GADD45B levels) and downregulation of XLF and MRE11. | |||
Responsed Disease | Germ cell tumour of testis [ICD-11: 2C80.2] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Protein virilizer homolog (VIRMA) | WRITER | ||
Target Regulation | Down regulation | |||
In-vitro Model | 2102EP | Embryonal carcinoma | Homo sapiens | CVCL_C522 |
NCC-IT | Testicular embryonal carcinoma | Homo sapiens | CVCL_1451 | |
NT2 | Malignant neoplasms | Mus musculus | CVCL_JA57 | |
TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 | |
Negative growth regulatory protein MyD118 (GADD45B)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | VIRMA has an oncogenic role in germ cell tumor confirming our previous tissue-based study and is further involved in response to cisplatin by interfering with DNA repair. Enhanced response to cisplatin after VIRMA knockdown was related to significant increase in DNA damage (with higher Gamma-H2AX and Negative growth regulatory protein MyD118 (GADD45B) levels) and downregulation of XLF and MRE11. | |||
Responsed Disease | Germ cell tumour of testis [ICD-11: 2C80.2] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Protein virilizer homolog (VIRMA) | WRITER | ||
Target Regulation | Down regulation | |||
In-vitro Model | 2102EP | Embryonal carcinoma | Homo sapiens | CVCL_C522 |
NCC-IT | Testicular embryonal carcinoma | Homo sapiens | CVCL_1451 | |
NT2 | Malignant neoplasms | Mus musculus | CVCL_JA57 | |
TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 | |
Non-homologous end-joining factor 1 (NHEJ1/XLF)
In total 1 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
Response Summary | VIRMA has an oncogenic role in germ cell tumor confirming our previous tissue-based study and is further involved in response to cisplatin by interfering with DNA repair. Enhanced response to cisplatin after VIRMA knockdown was related to significant increase in DNA damage (with higher Gamma-H2AX and GADD45B levels) and downregulation of Non-homologous end-joining factor 1 (NHEJ1/XLF) and MRE11. | |||
Responsed Disease | Germ cell tumour of testis [ICD-11: 2C80.2] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Protein virilizer homolog (VIRMA) | WRITER | ||
Target Regulation | Up regulation | |||
In-vitro Model | 2102EP | Embryonal carcinoma | Homo sapiens | CVCL_C522 |
NCC-IT | Testicular embryonal carcinoma | Homo sapiens | CVCL_1451 | |
NT2 | Malignant neoplasms | Mus musculus | CVCL_JA57 | |
TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 | |
Transcription factor AP-2 gamma (TFAP2C)
In total 2 item(s) under this target gene | ||||
Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
Response Summary | METTL3 potentiates resistance to cisplatin through m6A modification of Transcription factor AP-2 gamma (TFAP2C) in seminoma. Enhanced stability of TFAP2C mRNA promoted seminoma cell survival under cisplatin treatment burden probably through up-regulation of DNA repair-related genes. IGF2BP1 binds to TFAP2C and enhances TFAP2C mRNA stability. | |||
Responsed Disease | Testicular cancer [ICD-11: 2C80] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
Target Regulation | Up regulation | |||
Pathway Response | Nucleotide excision repair | hsa03420 | ||
Cell Process | DNA repair | |||
In-vitro Model | TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 |
In-vivo Model | Male mice were subcutaneously injected with tumour cells near the limbs to establish xenografts (1 × 106/mouse, 0.2 mL for each injection site; METTL3-overexpressing TCam-2/CDDP cells were inoculated once at the initial time and IGF2BP1-inhibited TCam-2/CDDP cells were inoculated every 3 days). | |||
Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
Response Summary | METTL3 potentiates resistance to cisplatin through m6A modification of Transcription factor AP-2 gamma (TFAP2C) in seminoma. Enhanced stability of TFAP2C mRNA promoted seminoma cell survival under cisplatin treatment burden probably through up-regulation of DNA repair-related genes. IGF2BP1 binds to TFAP2C and enhances TFAP2C mRNA stability. | |||
Responsed Disease | Testicular cancer [ICD-11: 2C80] | |||
Responsed Drug | Cisplatin | Approved | ||
Target Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | READER | ||
Target Regulation | Up regulation | |||
Pathway Response | Nucleotide excision repair | hsa03420 | ||
Cell Process | DNA repair | |||
In-vitro Model | TCam-2 | Testicular seminoma | Homo sapiens | CVCL_T012 |
In-vivo Model | Male mice were subcutaneously injected with tumour cells near the limbs to establish xenografts (1 × 106/mouse, 0.2 mL for each injection site; METTL3-overexpressing TCam-2/CDDP cells were inoculated once at the initial time and IGF2BP1-inhibited TCam-2/CDDP cells were inoculated every 3 days). | |||
References