m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00214)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
CDKN1B
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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YTH domain-containing family protein 1 (YTHDF1) [READER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [3] | |||
| Response Summary | YTHDF1 deficiency inhibits Non-small cell lung cancer cell proliferation and xenograft tumor formation through regulating the translational efficiency of CDK2, CDK4, Cyclin-dependent kinase inhibitor 1B (CDKN1B/p27), and cyclin D1, and that YTHDF1 depletion restrains de novo lung adenocarcinomas (ADC) progression. Mechanistic studies identified the Keap1-Nrf2-AKR1C1 axis as the downstream mediator of YTHDF1. YTHDF1 high expression correlates with better clinical outcome, with its depletion rendering cancerous cells resistant to cisplatin (DDP) treatment. | |||
| Target Regulation | Down regulation | |||
| Responsed Disease | Non-small-cell lung carcinoma | ICD-11: 2C25.Y | ||
| Responsed Drug | Cisplatin | Approved | ||
| Pathway Response | Chemical carcinogenesis - reactive oxygen species | hsa05208 | ||
| Cell cycle | hsa04110 | |||
| Cell Process | Biological regulation | |||
| In-vitro Model | A-549 | Lung adenocarcinoma | Homo sapiens | CVCL_0023 |
| A549-DDP (Human lung adenocarcinoma is resistant to cisplatin) | ||||
| GLC-82 | Endocervical adenocarcinoma | Homo sapiens | CVCL_3371 | |
| NCI-H1299 | Lung large cell carcinoma | Homo sapiens | CVCL_0060 | |
| NCI-H1975 | Lung adenocarcinoma | Homo sapiens | CVCL_1511 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| NCI-H1650 | Minimally invasive lung adenocarcinoma | Homo sapiens | CVCL_1483 | |
| NCI-H838 | Lung adenocarcinoma | Homo sapiens | CVCL_1594 | |
| SPC-A1 | Endocervical adenocarcinoma | Homo sapiens | CVCL_6955 | |
| In-vivo Model | Mice were treated via nasal inhalation of adenovirus carrying Cre recombinase (5 × 106 p.f.u for Ad-Cre, Biowit Inc., Shenzhen, Guangdong), and were then killed at indicated times for gross inspection and histopathological examination. | |||
YTH domain-containing family protein 2 (YTHDF2) [READER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [4] | |||
| Response Summary | The role of YTHDF2 in tumourigenesis and cisplatin-desensitising function by promoting the degradation of Cyclin-dependent kinase inhibitor 1B (CDKN1B/p27) mRNA in an m6 A-dependent manner. YTHDF2 exhibits tumour oncogenic and cisplatin-desensitising properties, which offer insight into the development of novel combination therapeutic strategies for intrahepatic cholangiocarcinoma. | |||
| Target Regulation | Down regulation | |||
| Responsed Disease | Intrahepatic cholangiocarcinoma | ICD-11: 2C12.10 | ||
| Responsed Drug | Cisplatin | Approved | ||
| Pathway Response | Cell cycle | hsa04110 | ||
| Cell Process | Cell proliferation | |||
| Arrest cell cycle at G0/G1 phase | ||||
| In-vitro Model | HuCC-T1 | Intrahepatic cholangiocarcinoma | Homo sapiens | CVCL_0324 |
| RBE | Intrahepatic cholangiocarcinoma | Homo sapiens | CVCL_4896 | |
| HCCC-9810 (The intrahepatic cholangiocarcinoma cell lines (HCCC-9810) were purchased from Cellcook Co., Ltd. (Guangzhou, China).) | ||||
| HIBEC (The normal intrahepatic bile duct cell line (HIBEC) were purchased from Cellcook Co., Ltd. (Guangzhou, China).) | ||||
| In-vivo Model | For tumour xenograft models, 1 × 107 HuCC-T1 cells in knockdown group or control group were implanted into the right flank of 5-week-old female nude mice. The volumes of tumour were recorded every 4 days by calliper. The volumes were calculated as length × width2/2. For patient-derived xenograft (PDX) model (PDX0075), ICC tissues from a patient, who relapsed in 6 months after R0 resection and subsequent chemotherapy with cisplatin and gemcitabine, were diced into 3 mm3 pieces and transplanted subcutaneously into the right flank of 5-week-old female B-NDG mice. | |||
Liver cancer [ICD-11: 2C12]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [4] | |||
| Response Summary | The role of YTHDF2 in tumourigenesis and cisplatin-desensitising function by promoting the degradation of Cyclin-dependent kinase inhibitor 1B (CDKN1B/p27) mRNA in an m6 A-dependent manner. YTHDF2 exhibits tumour oncogenic and cisplatin-desensitising properties, which offer insight into the development of novel combination therapeutic strategies for intrahepatic cholangiocarcinoma. | |||
| Responsed Disease | Intrahepatic cholangiocarcinoma [ICD-11: 2C12.10] | |||
| Target Regulator | YTH domain-containing family protein 2 (YTHDF2) | READER | ||
| Target Regulation | Down regulation | |||
| Responsed Drug | Cisplatin | Approved | ||
| Pathway Response | Cell cycle | hsa04110 | ||
| Cell Process | Cell proliferation | |||
| Arrest cell cycle at G0/G1 phase | ||||
| In-vitro Model | HuCC-T1 | Intrahepatic cholangiocarcinoma | Homo sapiens | CVCL_0324 |
| RBE | Intrahepatic cholangiocarcinoma | Homo sapiens | CVCL_4896 | |
| HCCC-9810 (The intrahepatic cholangiocarcinoma cell lines (HCCC-9810) were purchased from Cellcook Co., Ltd. (Guangzhou, China).) | ||||
| HIBEC (The normal intrahepatic bile duct cell line (HIBEC) were purchased from Cellcook Co., Ltd. (Guangzhou, China).) | ||||
| In-vivo Model | For tumour xenograft models, 1 × 107 HuCC-T1 cells in knockdown group or control group were implanted into the right flank of 5-week-old female nude mice. The volumes of tumour were recorded every 4 days by calliper. The volumes were calculated as length × width2/2. For patient-derived xenograft (PDX) model (PDX0075), ICC tissues from a patient, who relapsed in 6 months after R0 resection and subsequent chemotherapy with cisplatin and gemcitabine, were diced into 3 mm3 pieces and transplanted subcutaneously into the right flank of 5-week-old female B-NDG mice. | |||
Lung cancer [ICD-11: 2C25]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [3] | |||
| Response Summary | YTHDF1 deficiency inhibits Non-small cell lung cancer cell proliferation and xenograft tumor formation through regulating the translational efficiency of CDK2, CDK4, Cyclin-dependent kinase inhibitor 1B (CDKN1B/p27), and cyclin D1, and that YTHDF1 depletion restrains de novo lung adenocarcinomas (ADC) progression. Mechanistic studies identified the Keap1-Nrf2-AKR1C1 axis as the downstream mediator of YTHDF1. YTHDF1 high expression correlates with better clinical outcome, with its depletion rendering cancerous cells resistant to cisplatin (DDP) treatment. | |||
| Responsed Disease | Non-small-cell lung carcinoma [ICD-11: 2C25.Y] | |||
| Target Regulator | YTH domain-containing family protein 1 (YTHDF1) | READER | ||
| Target Regulation | Down regulation | |||
| Responsed Drug | Cisplatin | Approved | ||
| Pathway Response | Chemical carcinogenesis - reactive oxygen species | hsa05208 | ||
| Cell cycle | hsa04110 | |||
| Cell Process | Biological regulation | |||
| In-vitro Model | A-549 | Lung adenocarcinoma | Homo sapiens | CVCL_0023 |
| A549-DDP (Human lung adenocarcinoma is resistant to cisplatin) | ||||
| GLC-82 | Endocervical adenocarcinoma | Homo sapiens | CVCL_3371 | |
| NCI-H1299 | Lung large cell carcinoma | Homo sapiens | CVCL_0060 | |
| NCI-H1975 | Lung adenocarcinoma | Homo sapiens | CVCL_1511 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| NCI-H1650 | Minimally invasive lung adenocarcinoma | Homo sapiens | CVCL_1483 | |
| NCI-H838 | Lung adenocarcinoma | Homo sapiens | CVCL_1594 | |
| SPC-A1 | Endocervical adenocarcinoma | Homo sapiens | CVCL_6955 | |
| In-vivo Model | Mice were treated via nasal inhalation of adenovirus carrying Cre recombinase (5 × 106 p.f.u for Ad-Cre, Biowit Inc., Shenzhen, Guangdong), and were then killed at indicated times for gross inspection and histopathological examination. | |||
Cisplatin
[Approved]
| In total 2 item(s) under this drug | ||||
| Experiment 1 Reporting the m6A-centered Drug Response | [3] | |||
| Response Summary | YTHDF1 deficiency inhibits Non-small cell lung cancer cell proliferation and xenograft tumor formation through regulating the translational efficiency of CDK2, CDK4, Cyclin-dependent kinase inhibitor 1B (CDKN1B/p27), and cyclin D1, and that YTHDF1 depletion restrains de novo lung adenocarcinomas (ADC) progression. Mechanistic studies identified the Keap1-Nrf2-AKR1C1 axis as the downstream mediator of YTHDF1. YTHDF1 high expression correlates with better clinical outcome, with its depletion rendering cancerous cells resistant to cisplatin (DDP) treatment. | |||
| Target Regulator | YTH domain-containing family protein 1 (YTHDF1) | READER | ||
| Target Regulation | Down regulation | |||
| Responsed Disease | Non-small-cell lung carcinoma | ICD-11: 2C25.Y | ||
| Pathway Response | Chemical carcinogenesis - reactive oxygen species | hsa05208 | ||
| Cell cycle | hsa04110 | |||
| Cell Process | Biological regulation | |||
| In-vitro Model | A-549 | Lung adenocarcinoma | Homo sapiens | CVCL_0023 |
| A549-DDP (Human lung adenocarcinoma is resistant to cisplatin) | ||||
| GLC-82 | Endocervical adenocarcinoma | Homo sapiens | CVCL_3371 | |
| NCI-H1299 | Lung large cell carcinoma | Homo sapiens | CVCL_0060 | |
| NCI-H1975 | Lung adenocarcinoma | Homo sapiens | CVCL_1511 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| NCI-H1650 | Minimally invasive lung adenocarcinoma | Homo sapiens | CVCL_1483 | |
| NCI-H838 | Lung adenocarcinoma | Homo sapiens | CVCL_1594 | |
| SPC-A1 | Endocervical adenocarcinoma | Homo sapiens | CVCL_6955 | |
| In-vivo Model | Mice were treated via nasal inhalation of adenovirus carrying Cre recombinase (5 × 106 p.f.u for Ad-Cre, Biowit Inc., Shenzhen, Guangdong), and were then killed at indicated times for gross inspection and histopathological examination. | |||
| Experiment 2 Reporting the m6A-centered Drug Response | [4] | |||
| Response Summary | The role of YTHDF2 in tumourigenesis and cisplatin-desensitising function by promoting the degradation of Cyclin-dependent kinase inhibitor 1B (CDKN1B/p27) mRNA in an m6 A-dependent manner. YTHDF2 exhibits tumour oncogenic and cisplatin-desensitising properties, which offer insight into the development of novel combination therapeutic strategies for intrahepatic cholangiocarcinoma. | |||
| Target Regulator | YTH domain-containing family protein 2 (YTHDF2) | READER | ||
| Target Regulation | Down regulation | |||
| Responsed Disease | Intrahepatic cholangiocarcinoma | ICD-11: 2C12.10 | ||
| Pathway Response | Cell cycle | hsa04110 | ||
| Cell Process | Cell proliferation | |||
| Arrest cell cycle at G0/G1 phase | ||||
| In-vitro Model | HuCC-T1 | Intrahepatic cholangiocarcinoma | Homo sapiens | CVCL_0324 |
| RBE | Intrahepatic cholangiocarcinoma | Homo sapiens | CVCL_4896 | |
| HCCC-9810 (The intrahepatic cholangiocarcinoma cell lines (HCCC-9810) were purchased from Cellcook Co., Ltd. (Guangzhou, China).) | ||||
| HIBEC (The normal intrahepatic bile duct cell line (HIBEC) were purchased from Cellcook Co., Ltd. (Guangzhou, China).) | ||||
| In-vivo Model | For tumour xenograft models, 1 × 107 HuCC-T1 cells in knockdown group or control group were implanted into the right flank of 5-week-old female nude mice. The volumes of tumour were recorded every 4 days by calliper. The volumes were calculated as length × width2/2. For patient-derived xenograft (PDX) model (PDX0075), ICC tissues from a patient, who relapsed in 6 months after R0 resection and subsequent chemotherapy with cisplatin and gemcitabine, were diced into 3 mm3 pieces and transplanted subcutaneously into the right flank of 5-week-old female B-NDG mice. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
RNA modification
m6A Regulator: Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT00493 | ||
| Epigenetic Regulator | Double-stranded RNA-specific editase 1 (ADARB1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
| Crosstalk ID: M6ACROT00494 | ||
| Epigenetic Regulator | Interferon-inducible protein 4 (ADAR1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT00495 | ||
| Epigenetic Regulator | Double-stranded RNA-specific editase 1 (ADARB1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
| Crosstalk ID: M6ACROT00496 | ||
| Epigenetic Regulator | Interferon-inducible protein 4 (ADAR1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
m6A Regulator: Methyltransferase-like 14 (METTL14)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT00497 | ||
| Epigenetic Regulator | Double-stranded RNA-specific editase 1 (ADARB1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
| Crosstalk ID: M6ACROT00498 | ||
| Epigenetic Regulator | Interferon-inducible protein 4 (ADAR1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT00499 | ||
| Epigenetic Regulator | Double-stranded RNA-specific editase 1 (ADARB1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
| Crosstalk ID: M6ACROT00500 | ||
| Epigenetic Regulator | Interferon-inducible protein 4 (ADAR1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
m6A Regulator: Wilms tumor 1-associating protein (WTAP)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT00501 | ||
| Epigenetic Regulator | Double-stranded RNA-specific editase 1 (ADARB1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
| Crosstalk ID: M6ACROT00502 | ||
| Epigenetic Regulator | Interferon-inducible protein 4 (ADAR1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
m6A Regulator: ELAV-like protein 1 (ELAVL1)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT00503 | ||
| Epigenetic Regulator | Double-stranded RNA-specific editase 1 (ADARB1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
| Crosstalk ID: M6ACROT00504 | ||
| Epigenetic Regulator | Interferon-inducible protein 4 (ADAR1) | |
| Regulated Target | MicroRNA 222 (MIR222) | |
| Crosstalk relationship | A-to-I → m6A | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00214)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE005422 | Click to Show/Hide the Full List | ||
| mod site | chr12:12715355-12715356:+ | [5] | |
| Sequence | GAAAAACTAAAGAGGATGAGACCTCTTGCTTGATCCTAGGT | ||
| Transcript ID List | ENST00000477087.1 | ||
| External Link | RMBase: RNA-editing_site_26991 | ||
N6-methyladenosine (m6A)
| In total 49 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE010820 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717523-12717524:+ | [6] | |
| Sequence | AGAGCGGCTGGGTTCGCGGGACCCGCGGGCTTGCACCCGCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; GM12878; MM6; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; TREX; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177624 | ||
| mod ID: M6ASITE010821 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717547-12717548:+ | [6] | |
| Sequence | GCGGGCTTGCACCCGCCCAGACTCGGACGGGCTTTGCCACC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; GM12878; MM6; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; TREX; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177625 | ||
| mod ID: M6ASITE010822 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717634-12717635:+ | [6] | |
| Sequence | AGTCCATTTGATCAGCGGAGACTCGGCGGCCGGGCCGGGGC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; GM12878; MM6; peripheral-blood; GSC-11; HEK293T; iSLK; TREX; MSC; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177626 | ||
| mod ID: M6ASITE010823 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717826-12717827:+ | [6] | |
| Sequence | CGAGAGAGGCGGTCGTGCAGACCCGGGAGAAAGATGTCAAA | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; U2OS; A549; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000396340.1; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177627 | ||
| mod ID: M6ASITE010824 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717930-12717931:+ | [6] | |
| Sequence | CAAGCCCTCGGCCTGCAGGAACCTCTTCGGCCCGGTGGACC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000396340.1; ENST00000477087.1; ENST00000228872.9; ENST00000442489.1 | ||
| External Link | RMBase: m6A_site_177628 | ||
| mod ID: M6ASITE010825 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717948-12717949:+ | [6] | |
| Sequence | GAACCTCTTCGGCCCGGTGGACCACGAAGAGTTAACCCGGG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000396340.1; ENST00000228872.9; ENST00000442489.1; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177629 | ||
| mod ID: M6ASITE010826 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717969-12717970:+ | [6] | |
| Sequence | CCACGAAGAGTTAACCCGGGACTTGGAGAAGCACTGCAGAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000396340.1; ENST00000477087.1; ENST00000442489.1; ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177630 | ||
| mod ID: M6ASITE010827 | Click to Show/Hide the Full List | ||
| mod site | chr12:12717990-12717991:+ | [6] | |
| Sequence | CTTGGAGAAGCACTGCAGAGACATGGAAGAGGCGAGCCAGC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP | ||
| Transcript ID List | ENST00000442489.1; ENST00000228872.9; ENST00000477087.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177631 | ||
| mod ID: M6ASITE010828 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718038-12718039:+ | [7] | |
| Sequence | GAATTTCGATTTTCAGAATCACAAACCCCTAGAGGGCAAGT | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000396340.1; ENST00000442489.1; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177632 | ||
| mod ID: M6ASITE010829 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718042-12718043:+ | [6] | |
| Sequence | TTCGATTTTCAGAATCACAAACCCCTAGAGGGCAAGTACGA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000442489.1; ENST00000396340.1; ENST00000228872.9; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177633 | ||
| mod ID: M6ASITE010830 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718108-12718109:+ | [6] | |
| Sequence | TTGCCCGAGTTCTACTACAGACCCCCGCGGCCCCCCAAAGG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000477087.1; ENST00000442489.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177634 | ||
| mod ID: M6ASITE010831 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718218-12718219:+ | [6] | |
| Sequence | GGCTCCGGCTAACTCTGAGGACACGCATTTGGTGGACCCAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000477087.1; ENST00000442489.1; ENST00000228872.9; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177635 | ||
| mod ID: M6ASITE010832 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718233-12718234:+ | [6] | |
| Sequence | TGAGGACACGCATTTGGTGGACCCAAAGACTGATCCGTCGG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000396340.1; ENST00000442489.1; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177636 | ||
| mod ID: M6ASITE010833 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718241-12718242:+ | [6] | |
| Sequence | CGCATTTGGTGGACCCAAAGACTGATCCGTCGGACAGCCAG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000396340.1; ENST00000228872.9; ENST00000442489.1; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177637 | ||
| mod ID: M6ASITE010834 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718254-12718255:+ | [6] | |
| Sequence | CCCAAAGACTGATCCGTCGGACAGCCAGACGGGGTTAGCGG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000477087.1; ENST00000442489.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177638 | ||
| mod ID: M6ASITE010835 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718839-12718840:+ | [6] | |
| Sequence | CTTAGATTCTTCTACTCAAAACAAAAGAGCCAACAGAACAG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000477087.1; ENST00000228872.9; ENST00000442489.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177639 | ||
| mod ID: M6ASITE010836 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718856-12718857:+ | [6] | |
| Sequence | AAAACAAAAGAGCCAACAGAACAGAAGAAAATGTTTCAGAC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1B; H1A; hNPCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000442489.1; ENST00000477087.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177640 | ||
| mod ID: M6ASITE010837 | Click to Show/Hide the Full List | ||
| mod site | chr12:12718946-12718947:+ | [8] | |
| Sequence | TCAGAAGACGTCAAACGTAAACAGCTCGGTGGGTTGATCAC | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; TREX; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000442489.1; ENST00000477087.1; ENST00000396340.1; ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177641 | ||
| mod ID: M6ASITE010838 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721127-12721128:+ | [9] | |
| Sequence | TTTAAAAATACATATCGCTGACTTCATGGAATGGACATCCT | ||
| Motif Score | 3.28175 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000442489.1; ENST00000396340.1; ENST00000228872.9; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177642 | ||
| mod ID: M6ASITE010839 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721141-12721142:+ | [6] | |
| Sequence | TCGCTGACTTCATGGAATGGACATCCTGTATAAGCACTGAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HEK293T; brain; hESC-HEK293T; hNPCs; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK; AML | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; m6A-CLIP/IP; miCLIP | ||
| Transcript ID List | ENST00000396340.1; ENST00000442489.1; ENST00000228872.9; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177643 | ||
| mod ID: M6ASITE010840 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721164-12721165:+ | [6] | |
| Sequence | TCCTGTATAAGCACTGAAAAACAACAACACAATAACACTAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HEK293T; hESC-HEK293T; hNPCs; hESCs; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000442489.1; ENST00000228872.9; ENST00000396340.1; ENST00000477087.1 | ||
| External Link | RMBase: m6A_site_177644 | ||
| mod ID: M6ASITE010841 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721178-12721179:+ | [7] | |
| Sequence | TGAAAAACAACAACACAATAACACTAAAATTTTAGGCACTC | ||
| Motif Score | 2.168095238 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000396340.1; ENST00000477087.1; ENST00000442489.1; ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177645 | ||
| mod ID: M6ASITE010842 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721180-12721181:+ | [9] | |
| Sequence | AAAAACAACAACACAATAACACTAAAATTTTAGGCACTCTT | ||
| Motif Score | 2.506922619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000477087.1; ENST00000228872.9; ENST00000442489.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177646 | ||
| mod ID: M6ASITE010843 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721271-12721272:+ | [9] | |
| Sequence | TTCCTTATTTGCTTCATTGTACTACCTGTGTATATAGTTTT | ||
| Motif Score | 3.278136905 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000442489.1; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177647 | ||
| mod ID: M6ASITE010844 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721274-12721275:+ | [9] | |
| Sequence | CTTATTTGCTTCATTGTACTACCTGTGTATATAGTTTTTAC | ||
| Motif Score | 2.05802381 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000442489.1; ENST00000228872.9; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177648 | ||
| mod ID: M6ASITE010845 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721307-12721308:+ | [7] | |
| Sequence | GTTTTTACCTTTTATGTAGCACATAAACTTTGGGGAAGGGA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000396340.1; ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177649 | ||
| mod ID: M6ASITE010846 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721313-12721314:+ | [6] | |
| Sequence | ACCTTTTATGTAGCACATAAACTTTGGGGAAGGGAGGGCAG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HEK293T; BGC823; hNPCs; hESCs; A549; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177650 | ||
| mod ID: M6ASITE010847 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721348-12721349:+ | [6] | |
| Sequence | GGGCAGGGTGGGGCTGAGGAACTGACGTGGAGCGGGGTATG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HEK293T; BGC823; hESCs; A549; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000228872.9; ENST00000396340.1 | ||
| External Link | RMBase: m6A_site_177651 | ||
| mod ID: M6ASITE010848 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721483-12721484:+ | [6] | |
| Sequence | ATGTAATGTCCCTTTCAGAGACAGCTGATACTTCATTTAAA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; liver | ||
| Seq Type List | m6A-seq; m6A-REF-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177652 | ||
| mod ID: M6ASITE010849 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721522-12721523:+ | [6] | |
| Sequence | AAAAAATCACAAAAATTTGAACACTGGCTAAAGATAATTGC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177653 | ||
| mod ID: M6ASITE010850 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721554-12721555:+ | [7] | |
| Sequence | GATAATTGCTATTTATTTTTACAAGAAGTTTATTCTCATTT | ||
| Motif Score | 2.07285119 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177654 | ||
| mod ID: M6ASITE010851 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721652-12721653:+ | [6] | |
| Sequence | TTTTTAAAAAAGCAACAGAAACCTATCCTCACTGCCCTCCC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177655 | ||
| mod ID: M6ASITE010852 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721662-12721663:+ | [9] | |
| Sequence | AGCAACAGAAACCTATCCTCACTGCCCTCCCCAGTCTCTCT | ||
| Motif Score | 2.469291667 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177656 | ||
| mod ID: M6ASITE010853 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721813-12721814:+ | [7] | |
| Sequence | TGCTTTTATTAAATTTGTTGACAAAATTTTCTCATTTTCTT | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177657 | ||
| mod ID: M6ASITE010854 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721837-12721838:+ | [9] | |
| Sequence | AATTTTCTCATTTTCTTTTCACTTCGGGCTGTGTAAACACA | ||
| Motif Score | 2.469291667 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177658 | ||
| mod ID: M6ASITE010855 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721853-12721854:+ | [7] | |
| Sequence | TTTCACTTCGGGCTGTGTAAACACAGTCAAAATAATTCTAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177659 | ||
| mod ID: M6ASITE010856 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721910-12721911:+ | [7] | |
| Sequence | AAAGATCTGTAAGTAACTTCACATTAAAAAATGAAATATTT | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177660 | ||
| mod ID: M6ASITE010857 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721946-12721947:+ | [9] | |
| Sequence | TATTTTTTAATTTAAAGCTTACTCTGTCCATTTATCCACAG | ||
| Motif Score | 2.494845238 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177661 | ||
| mod ID: M6ASITE010858 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722008-12722009:+ | [7] | |
| Sequence | AGGTTCATGTAGAGAAAAGCACACTTGTAGGATAAGTGAAA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177662 | ||
| mod ID: M6ASITE010859 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722047-12722048:+ | [6] | |
| Sequence | AATGGATACTACATCTTTAAACAGTATTTCATTGCCTGTGT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177663 | ||
| mod ID: M6ASITE010860 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722076-12722077:+ | [6] | |
| Sequence | CATTGCCTGTGTATGGAAAAACCATTTGAAGTGTACCTGTG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177664 | ||
| mod ID: M6ASITE010861 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722098-12722099:+ | [7] | |
| Sequence | CATTTGAAGTGTACCTGTGTACATAACTCTGTAAAAACACT | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177665 | ||
| mod ID: M6ASITE010862 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722114-12722115:+ | [6] | |
| Sequence | GTGTACATAACTCTGTAAAAACACTGAAAAATTATACTAAC | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177666 | ||
| mod ID: M6ASITE010863 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722116-12722117:+ | [9] | |
| Sequence | GTACATAACTCTGTAAAAACACTGAAAAATTATACTAACTT | ||
| Motif Score | 2.506922619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177667 | ||
| mod ID: M6ASITE010864 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722167-12722168:+ | [6] | |
| Sequence | AAAGATTTTTTTTAATCTAGACAATATACAAGCCAAAGTGG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177668 | ||
| mod ID: M6ASITE010865 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722174-12722175:+ | [7] | |
| Sequence | TTTTTTAATCTAGACAATATACAAGCCAAAGTGGCATGTTT | ||
| Motif Score | 2.110482143 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177669 | ||
| mod ID: M6ASITE010866 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722278-12722279:+ | [9] | |
| Sequence | CTATGCTTAAAAGGTTGCATACTGAGCCAAGTATAATTTTT | ||
| Motif Score | 2.53247619 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177670 | ||
| mod ID: M6ASITE010867 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722331-12722332:+ | [7] | |
| Sequence | AAAAGATGCCAATTATTGTTACACATTAAGTAATCAATAAA | ||
| Motif Score | 2.07285119 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177671 | ||
| mod ID: M6ASITE010868 | Click to Show/Hide the Full List | ||
| mod site | chr12:12722356-12722357:+ | [6] | |
| Sequence | TTAAGTAATCAATAAAGAAAACTTCCATAGCTATTCATTGA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000228872.9 | ||
| External Link | RMBase: m6A_site_177672 | ||
N7-methylguanosine (m7G)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: m7GSITE000012 | Click to Show/Hide the Full List | ||
| mod site | chr12:12721335-12721336:+ | [10] | |
| Sequence | TTTGGGGAAGGGAGGGCAGGGTGGGGCTGAGGAACTGACGT | ||
| Cell/Tissue List | A549; HeLa; HepG2 | ||
| Seq Type List | BoRed-seq&m7G-RIP-seq; m7G-seq | ||
| Transcript ID List | ENST00000396340.1; ENST00000228872.9 | ||
| External Link | RMBase: m7G_site_196 | ||
References