m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01574)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
DNA modification
m6A Regulator: Fat mass and obesity-associated protein (FTO)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT02080 | ||
| Epigenetic Regulator | DNA (cytosine-5)-methyltransferase 1 (DNMT1) | |
| Regulated Target | FTO alpha-ketoglutarate dependent dioxygenase (FTO) | |
| Crosstalk relationship | DNA modification → m6A | |
| Disease | Major depressive disorder | |
| Crosstalk ID: M6ACROT02084 | ||
| Epigenetic Regulator | Cysteine methyltransferase DNMT3A (DNMT3A) | |
| Regulated Target | FTO alpha-ketoglutarate dependent dioxygenase (FTO) | |
| Crosstalk relationship | DNA modification → m6A | |
| Disease | Major depressive disorder | |
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 2 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT02088 | ||
| Epigenetic Regulator | DNA (cytosine-5)-methyltransferase 1 (DNMT1) | |
| Regulated Target | FTO alpha-ketoglutarate dependent dioxygenase (FTO) | |
| Crosstalk relationship | DNA modification → m6A | |
| Disease | Major depressive disorder | |
| Crosstalk ID: M6ACROT02092 | ||
| Epigenetic Regulator | Cysteine methyltransferase DNMT3A (DNMT3A) | |
| Regulated Target | FTO alpha-ketoglutarate dependent dioxygenase (FTO) | |
| Crosstalk relationship | DNA modification → m6A | |
| Disease | Major depressive disorder | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01574)
| In total 14 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE003175 | Click to Show/Hide the Full List | ||
| mod site | chr9:84686361-84686362:+ | [2] | |
| Sequence | GAGCACACAAGCTCAGCAACAGAGGAAAATCCAGGGGAAAA | ||
| Transcript ID List | ENST00000395882.5; ENST00000376208.5; ENST00000277120.7; ENST00000359847.3; ENST00000376213.5; ENST00000323115.9; ENST00000304053.10; ENST00000376214.5 | ||
| External Link | RMBase: RNA-editing_site_135967 | ||
| mod ID: A2ISITE003176 | Click to Show/Hide the Full List | ||
| mod site | chr9:84686383-84686384:+ | [2] | |
| Sequence | AGGAAAATCCAGGGGAAAAGAATCACTCCAGGGTCACCTGA | ||
| Transcript ID List | ENST00000304053.10; ENST00000376213.5; ENST00000395882.5; ENST00000323115.9; ENST00000376208.5; ENST00000359847.3; ENST00000376214.5; ENST00000277120.7 | ||
| External Link | RMBase: RNA-editing_site_135968 | ||
| mod ID: A2ISITE003177 | Click to Show/Hide the Full List | ||
| mod site | chr9:84694822-84694823:+ | [2] | |
| Sequence | TCTGTCTATCTAGAGATGATAGATAGATTGATAGATATCAT | ||
| Transcript ID List | ENST00000277120.7; rmsk_2796144; ENST00000376213.5; ENST00000304053.10; ENST00000395882.5; ENST00000376208.5; ENST00000359847.3; ENST00000323115.9; ENST00000376214.5 | ||
| External Link | RMBase: RNA-editing_site_135969 | ||
| mod ID: A2ISITE003178 | Click to Show/Hide the Full List | ||
| mod site | chr9:84719841-84719842:+ | [2] | |
| Sequence | CAGCCTGGGCAATGTGGCGAAACCGCATCTCTACCAAAAAT | ||
| Transcript ID List | ENST00000395882.5; ENST00000277120.7; ENST00000304053.10; ENST00000376208.5; ENST00000359847.3; rmsk_2796179; ENST00000376213.5; ENST00000323115.9; ENST00000376214.5 | ||
| External Link | RMBase: RNA-editing_site_135970 | ||
| mod ID: A2ISITE003179 | Click to Show/Hide the Full List | ||
| mod site | chr9:84719842-84719843:+ | [2] | |
| Sequence | AGCCTGGGCAATGTGGCGAAACCGCATCTCTACCAAAAATA | ||
| Transcript ID List | ENST00000323115.9; ENST00000277120.7; ENST00000359847.3; ENST00000304053.10; ENST00000376214.5; rmsk_2796179; ENST00000376208.5; ENST00000376213.5; ENST00000395882.5 | ||
| External Link | RMBase: RNA-editing_site_135971 | ||
| mod ID: A2ISITE003180 | Click to Show/Hide the Full List | ||
| mod site | chr9:84732052-84732053:+ | [3] | |
| Sequence | CTTTGGGTCCCACATTTAAGAATTGAACTTAGCTCTGGTTA | ||
| Transcript ID List | ENST00000376208.5; ENST00000376214.5; ENST00000323115.9; ENST00000376213.5; ENST00000277120.7; ENST00000395882.5; ENST00000304053.10; ENST00000359847.3 | ||
| External Link | RMBase: RNA-editing_site_135972 | ||
| mod ID: A2ISITE003181 | Click to Show/Hide the Full List | ||
| mod site | chr9:84794974-84794975:+ | [2] | |
| Sequence | CTCCCTAGCCTGGGACTTGGAAACATCTACTGTCTTAATTC | ||
| Transcript ID List | ENST00000359847.3; ENST00000277120.7; ENST00000395882.5; ENST00000376213.5; ENST00000376208.5; ENST00000323115.9; ENST00000376214.5; ENST00000304053.10 | ||
| External Link | RMBase: RNA-editing_site_135973 | ||
| mod ID: A2ISITE003182 | Click to Show/Hide the Full List | ||
| mod site | chr9:84949490-84949491:+ | [2] | |
| Sequence | TTTATTTATTTATTTGAGACAGAGTCTCGCTCTGTCACCCA | ||
| Transcript ID List | ENST00000323115.9; ENST00000376213.5; ENST00000376214.5; ENST00000277120.7 | ||
| External Link | RMBase: RNA-editing_site_135974 | ||
| mod ID: A2ISITE003183 | Click to Show/Hide the Full List | ||
| mod site | chr9:84966387-84966388:+ | [2] | |
| Sequence | ATATTCTTCACAAGCTTCTTAGCTGAGTCTGATGTCCAGCC | ||
| Transcript ID List | ENST00000277120.7; ENST00000376214.5; ENST00000323115.9; rmsk_2796598; ENST00000376213.5 | ||
| External Link | RMBase: RNA-editing_site_135975 | ||
| mod ID: A2ISITE003184 | Click to Show/Hide the Full List | ||
| mod site | chr9:84997029-84997030:+ | [2] | |
| Sequence | TCACATTCAACTGGGTGATAAGCAGCATGTGTCTGCACCCC | ||
| Transcript ID List | ENST00000376214.5; ENST00000277120.7; ENST00000376213.5; ENST00000323115.9 | ||
| External Link | RMBase: RNA-editing_site_135976 | ||
| mod ID: A2ISITE003185 | Click to Show/Hide the Full List | ||
| mod site | chr9:84997084-84997085:+ | [2] | |
| Sequence | TGTGGAGGCAAAGCATGCATACCTTTTACAGTCCTTGTAAA | ||
| Transcript ID List | ENST00000277120.7; ENST00000376213.5; ENST00000376214.5; ENST00000323115.9 | ||
| External Link | RMBase: RNA-editing_site_135977 | ||
| mod ID: A2ISITE003186 | Click to Show/Hide the Full List | ||
| mod site | chr9:84997091-84997092:+ | [2] | |
| Sequence | GCAAAGCATGCATACCTTTTACAGTCCTTGTAAAGCCAGTG | ||
| Transcript ID List | ENST00000376214.5; ENST00000376213.5; ENST00000277120.7; ENST00000323115.9 | ||
| External Link | RMBase: RNA-editing_site_135978 | ||
| mod ID: A2ISITE003187 | Click to Show/Hide the Full List | ||
| mod site | chr9:85008712-85008713:+ | [2] | |
| Sequence | GAAGCCTGGGTCTTCACTGTAGTTCAGTGTATCATACAACT | ||
| Transcript ID List | ENST00000376213.5; ENST00000277120.7; ENST00000323115.9; ENST00000376214.5 | ||
| External Link | RMBase: RNA-editing_site_135979 | ||
| mod ID: A2ISITE003188 | Click to Show/Hide the Full List | ||
| mod site | chr9:85024207-85024208:+ | [2] | |
| Sequence | TATCAGATTGCTTTTAAAGTAGCTGAACGAGCCACAGAATA | ||
| Transcript ID List | ENST00000277120.7; ENST00000323115.9 | ||
| External Link | RMBase: RNA-editing_site_135980 | ||
N6-methyladenosine (m6A)
| In total 23 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE088463 | Click to Show/Hide the Full List | ||
| mod site | chr9:84669848-84669849:+ | [4] | |
| Sequence | CGGCGGTAGCAGGAGCCTGGACCCAGGCGCCGCCGGCGGGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | GSC-11 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000277120.7; ENST00000376214.5; ENST00000304053.10; ENST00000395882.5; ENST00000376213.5; ENST00000376208.5 | ||
| External Link | RMBase: m6A_site_825835 | ||
| mod ID: M6ASITE088464 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670394-84670395:+ | [4] | |
| Sequence | AGCCTCGAGGTGCATACCGGACCCCCATTCGCATCTAACAA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | GSC-11 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000304053.10; ENST00000395882.5; ENST00000376214.5; ENST00000376213.5; ENST00000277120.7; ENST00000376208.5 | ||
| External Link | RMBase: m6A_site_825836 | ||
| mod ID: M6ASITE088465 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670556-84670557:+ | [4] | |
| Sequence | CTATGCCGGGGCCACTGTGAACCCTGCCGCCTGCCGGAACA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | GSC-11 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376208.5; ENST00000376214.5; ENST00000304053.10; ENST00000376213.5; ENST00000395882.5; ENST00000277120.7 | ||
| External Link | RMBase: m6A_site_825837 | ||
| mod ID: M6ASITE088466 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670574-84670575:+ | [4] | |
| Sequence | GAACCCTGCCGCCTGCCGGAACACTCTTCGCTCCGGACCAG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | GSC-11; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000395882.5; ENST00000304053.10; ENST00000376208.5; ENST00000376214.5; ENST00000277120.7; ENST00000376213.5 | ||
| External Link | RMBase: m6A_site_825838 | ||
| mod ID: M6ASITE088467 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670590-84670591:+ | [4] | |
| Sequence | CGGAACACTCTTCGCTCCGGACCAGCTCAGCCTCTGATAAG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | GSC-11; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000277120.7; ENST00000376208.5; ENST00000376214.5; ENST00000395882.5; ENST00000376213.5; ENST00000304053.10 | ||
| External Link | RMBase: m6A_site_825839 | ||
| mod ID: M6ASITE088468 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670615-84670616:+ | [4] | |
| Sequence | CTCAGCCTCTGATAAGCTGGACTCGGCACGCCCGCAACAAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | GSC-11; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000304053.10; ENST00000376214.5; ENST00000277120.7; ENST00000376208.5; ENST00000395882.5; ENST00000376213.5 | ||
| External Link | RMBase: m6A_site_825840 | ||
| mod ID: M6ASITE088469 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670716-84670717:+ | [4] | |
| Sequence | GCGGCCGGTGCAGCGCGGGGACAGGCACTCGGGCTGGCACT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | GSC-11; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000376214.5; ENST00000277120.7; ENST00000376208.5; ENST00000359847.3; ENST00000304053.10; ENST00000376213.5; ENST00000395882.5 | ||
| External Link | RMBase: m6A_site_825841 | ||
| mod ID: M6ASITE088470 | Click to Show/Hide the Full List | ||
| mod site | chr9:84670774-84670775:+ | [4] | |
| Sequence | TCCTGGATAAGGTGGCATGGACCCGCCATGGCGCGGCTCTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | GSC-11; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000359847.3; ENST00000376213.5; ENST00000277120.7; ENST00000376214.5; ENST00000304053.10; ENST00000395882.5; ENST00000376208.5; ENST00000323115.9 | ||
| External Link | RMBase: m6A_site_825842 | ||
| mod ID: M6ASITE088471 | Click to Show/Hide the Full List | ||
| mod site | chr9:84745063-84745064:+ | [5] | |
| Sequence | ACTGATAAAACCGGTCGGGAACATCTCTCGGTGAGTGGAAT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | kidney | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000376214.5; ENST00000359847.3; ENST00000395882.5; ENST00000277120.7; ENST00000376213.5; ENST00000304053.10; ENST00000376208.5; ENST00000323115.9 | ||
| External Link | RMBase: m6A_site_825843 | ||
| mod ID: M6ASITE088472 | Click to Show/Hide the Full List | ||
| mod site | chr9:84810647-84810648:+ | [6] | |
| Sequence | GATGCTGCCATGTAAGCTGGACTCCTGGGACTGCTGTTGGC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | TREX | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000395882.5; ENST00000376208.5; ENST00000323115.9; ENST00000376213.5; ENST00000376214.5; ENST00000304053.10; ENST00000359847.3; ENST00000277120.7 | ||
| External Link | RMBase: m6A_site_825844 | ||
| mod ID: M6ASITE088473 | Click to Show/Hide the Full List | ||
| mod site | chr9:84810656-84810657:+ | [6] | |
| Sequence | ATGTAAGCTGGACTCCTGGGACTGCTGTTGGCTTATCCCGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | TREX | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000395882.5; ENST00000304053.10; ENST00000376214.5; ENST00000376213.5; ENST00000359847.3; ENST00000323115.9; ENST00000277120.7; ENST00000376208.5 | ||
| External Link | RMBase: m6A_site_825845 | ||
| mod ID: M6ASITE088474 | Click to Show/Hide the Full List | ||
| mod site | chr9:84810932-84810933:+ | [5] | |
| Sequence | GTGCTTTTTGACCCTACTGGACATTTATTGACTTAATTGCT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | brain; kidney | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000395882.5; ENST00000376214.5; ENST00000376213.5; ENST00000277120.7; ENST00000376208.5; ENST00000323115.9; ENST00000359847.3; ENST00000304053.10 | ||
| External Link | RMBase: m6A_site_825846 | ||
| mod ID: M6ASITE088475 | Click to Show/Hide the Full List | ||
| mod site | chr9:84813321-84813322:+ | [5] | |
| Sequence | CTTGTGATTCTTTAGGAGAAACATGAAACCTGGATTTCGTG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | brain | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000395882.5; ENST00000304053.10; ENST00000359847.3; ENST00000376214.5; ENST00000277120.7; ENST00000323115.9; ENST00000376208.5; ENST00000376213.5 | ||
| External Link | RMBase: m6A_site_825847 | ||
| mod ID: M6ASITE088476 | Click to Show/Hide the Full List | ||
| mod site | chr9:84814277-84814278:+ | [5] | |
| Sequence | GGCTTGGAGCATCTCCTCAGACAGAGCAGAGGCGACACCTC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | brain | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000376208.5; ENST00000376214.5; ENST00000277120.7; ENST00000359847.3; ENST00000376213.5; ENST00000304053.10; ENST00000323115.9; ENST00000395882.5 | ||
| External Link | RMBase: m6A_site_825848 | ||
| mod ID: M6ASITE088477 | Click to Show/Hide the Full List | ||
| mod site | chr9:84872100-84872101:+ | [5] | |
| Sequence | TGGAGCTGAGGAGCTCAGCAACATCAAGTCTGGAGTTGGTC | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | brain | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000376208.5; ENST00000376214.5; ENST00000323115.9; ENST00000376213.5; ENST00000277120.7; ENST00000304053.10 | ||
| External Link | RMBase: m6A_site_825849 | ||
| mod ID: M6ASITE088478 | Click to Show/Hide the Full List | ||
| mod site | chr9:84948621-84948622:+ | [5] | |
| Sequence | CATGAAGCATGGGGACCTCAACAAGTTCCTCAGGTACAGTG | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | brain | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000376213.5; ENST00000323115.9; ENST00000376214.5; ENST00000277120.7 | ||
| External Link | RMBase: m6A_site_825850 | ||
| mod ID: M6ASITE088479 | Click to Show/Hide the Full List | ||
| mod site | chr9:85021423-85021424:+ | [7] | |
| Sequence | GGCATCTCCGGTCTACCTGGACATTCTAGGCTAGGGCCCTT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | Brain | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000277120.7; ENST00000376214.5; ENST00000323115.9; ENST00000376213.5 | ||
| External Link | RMBase: m6A_site_825851 | ||
| mod ID: M6ASITE088480 | Click to Show/Hide the Full List | ||
| mod site | chr9:85021452-85021453:+ | [7] | |
| Sequence | GCTAGGGCCCTTTTCCCCAGACCGATCCTTCCCAACGTACT | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | Brain | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000277120.7; ENST00000323115.9; ENST00000376213.5; ENST00000376214.5 | ||
| External Link | RMBase: m6A_site_825852 | ||
| mod ID: M6ASITE088481 | Click to Show/Hide the Full List | ||
| mod site | chr9:85021496-85021497:+ | [7] | |
| Sequence | CAGACGGGCTGAGAGGATGAACATCTTTTAACTGCCGCTGG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | Brain; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000376213.5; ENST00000323115.9; ENST00000376214.5; ENST00000277120.7 | ||
| External Link | RMBase: m6A_site_825853 | ||
| mod ID: M6ASITE088482 | Click to Show/Hide the Full List | ||
| mod site | chr9:85021564-85021565:+ | [8] | |
| Sequence | TGACAGTATTAACATCAAAGACTCCGAGAAGCTCTCGAGGG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | GM12878; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000277120.7; ENST00000376214.5; ENST00000376213.5; ENST00000323115.9 | ||
| External Link | RMBase: m6A_site_825854 | ||
| mod ID: M6ASITE088483 | Click to Show/Hide the Full List | ||
| mod site | chr9:85022813-85022814:+ | [8] | |
| Sequence | ATGGGTTTTAATGAATATGGACCCTGAAGCCTGGAAATCCT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | GM12878 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376214.5; ENST00000376213.5; ENST00000323115.9; ENST00000277120.7 | ||
| External Link | RMBase: m6A_site_825855 | ||
| mod ID: M6ASITE088484 | Click to Show/Hide the Full List | ||
| mod site | chr9:85022846-85022847:+ | [8] | |
| Sequence | GAAATCCTCATCCACGTCGAACCCACAGGACTGTGGGAAGG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | GM12878 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376213.5; ENST00000277120.7; ENST00000376214.5; ENST00000323115.9 | ||
| External Link | RMBase: m6A_site_825856 | ||
| mod ID: M6ASITE088485 | Click to Show/Hide the Full List | ||
| mod site | chr9:85022855-85022856:+ | [8] | |
| Sequence | ATCCACGTCGAACCCACAGGACTGTGGGAAGGGCAGAATCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | GM12878 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000277120.7; ENST00000323115.9; ENST00000376214.5; ENST00000376213.5 | ||
| External Link | RMBase: m6A_site_825857 | ||
References