m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00433)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
FAS
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
YTH domain-containing protein 2 (YTHDC2) [READER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [3] | |||
| Response Summary | In nonalcoholic fatty liver disease, Ythdc2 could bind to mRNA of lipogenic genes, including sterol regulatory element-binding protein 1c, Tumor necrosis factor receptor superfamily member 6 (FAS), stearoyl-CoA desaturase 1, and acetyl-CoA carboxylase 1, to decrease their mRNA stability and inhibit gene expression. | |||
| Target Regulation | Down regulation | |||
| Responsed Disease | Non-alcoholic fatty liver disease | ICD-11: DB92 | ||
| Pathway Response | RNA degradation | hsa03018 | ||
| Cell Process | RNA stability | |||
| In-vivo Model | All mice were housed at 21℃ ± 1℃ with a humidity of 55% ± 10% and a 12-hour light/dark cycle. The high-fat diets (HFDs), containing 60% kcal from fat, 20% kcal from carbohydrate, and 20% kcal from protein. | |||
Non-alcoholic fatty liver disease [ICD-11: DB92]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [3] | |||
| Response Summary | In nonalcoholic fatty liver disease, Ythdc2 could bind to mRNA of lipogenic genes, including sterol regulatory element-binding protein 1c, Tumor necrosis factor receptor superfamily member 6 (FAS), stearoyl-CoA desaturase 1, and acetyl-CoA carboxylase 1, to decrease their mRNA stability and inhibit gene expression. | |||
| Responsed Disease | Non-alcoholic fatty liver disease [ICD-11: DB92] | |||
| Target Regulator | YTH domain-containing protein 2 (YTHDC2) | READER | ||
| Target Regulation | Down regulation | |||
| Pathway Response | RNA degradation | hsa03018 | ||
| Cell Process | RNA stability | |||
| In-vivo Model | All mice were housed at 21℃ ± 1℃ with a humidity of 55% ± 10% and a 12-hour light/dark cycle. The high-fat diets (HFDs), containing 60% kcal from fat, 20% kcal from carbohydrate, and 20% kcal from protein. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05162 | ||
| Epigenetic Regulator | Long intergenic non-protein coding RNA 1410 (LINC01410) | |
| Regulated Target | Methyltransferase-like protein 3 (METTL3) | |
| Crosstalk relationship | ncRNA → m6A | |
| Disease | Preeclampsia | |
m6A Regulator: RNA-binding motif protein 15 (RBM15)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05203 | ||
| Epigenetic Regulator | FTO intronic transcript 1 (FTO-IT1) | |
| Regulated Target | RNA binding motif protein 15 (RBM15) | |
| Crosstalk relationship | ncRNA → m6A | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00433)
| In total 23 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE001326 | Click to Show/Hide the Full List | ||
| mod site | chr10:88990756-88990757:+ | [4] | |
| Sequence | GGGGCGGGCACTGGCACGGAACACACCCTGAGGCCAGCCCT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HepG2; HeLa; MSC; iSLK; endometrial | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000355740.7; ENST00000484444.5; ENST00000352159.8; ENST00000612663.5 | ||
| External Link | RMBase: m6A_site_109512 | ||
| mod ID: M6ASITE001327 | Click to Show/Hide the Full List | ||
| mod site | chr10:88990819-88990820:+ | [5] | |
| Sequence | CTTCTCCCGCGGGTTGGTGGACCCGCTCAGTACGGAGTTGG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HepG2; MSC; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000484444.5; ENST00000612663.5; ENST00000652046.1; ENST00000357339.6; ENST00000355740.7; ENST00000352159.8 | ||
| External Link | RMBase: m6A_site_109513 | ||
| mod ID: M6ASITE001328 | Click to Show/Hide the Full List | ||
| mod site | chr10:88990891-88990892:+ | [6] | |
| Sequence | CAACCATGCTGGGCATCTGGACCCTCCTACCTCTGGTGAGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000479522.5; ENST00000357339.6; ENST00000492756.5; ENST00000355740.7; ENST00000612663.5; ENST00000494410.5; ENST00000652046.1; ENST00000352159.8; ENST00000355279.2; ENST00000488877.5; ENST00000484444.5 | ||
| External Link | RMBase: m6A_site_109514 | ||
| mod ID: M6ASITE001330 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991056-88991057:+ | [7] | |
| Sequence | TGCTGCGGGAGGCGTTGGAGACTGGCTCCCGGGGGCTGTTA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; GSC-11; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000492756.5; ENST00000612663.5; ENST00000460510.5; ENST00000355740.7; ENST00000477270.5; ENST00000494410.5; ENST00000488877.5; ENST00000479522.5; ENST00000357339.6; ENST00000484444.5; ENST00000352159.8; ENST00000355279.2; ENST00000652046.1 | ||
| External Link | RMBase: m6A_site_109516 | ||
| mod ID: M6ASITE001331 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991079-88991080:+ | [7] | |
| Sequence | GGCTCCCGGGGGCTGTTAGGACCTTCCCTCAGGCCCGGGTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; GSC-11; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000612663.5; ENST00000488877.5; ENST00000652046.1; ENST00000477270.5; ENST00000355279.2; ENST00000492756.5; ENST00000355740.7; ENST00000494410.5; ENST00000352159.8; ENST00000479522.5; ENST00000460510.5; ENST00000357339.6; ENST00000484444.5 | ||
| External Link | RMBase: m6A_site_109517 | ||
| mod ID: M6ASITE001332 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991116-88991117:+ | [7] | |
| Sequence | GGTGCTCAGAACGCTGGAGGACTTGCTTTTCTTGGGCCTTG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; GSC-11; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000652046.1; ENST00000494410.5; ENST00000355279.2; ENST00000355740.7; ENST00000352159.8; ENST00000477270.5; ENST00000460510.5; ENST00000479522.5; ENST00000492756.5; ENST00000357339.6; ENST00000612663.5; ENST00000484444.5; ENST00000488877.5 | ||
| External Link | RMBase: m6A_site_109518 | ||
| mod ID: M6ASITE001333 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991191-88991192:+ | [7] | |
| Sequence | AGCTCCGGCGCTCCTCGGAGACCACTGCGCTCCACGTTGAG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HepG2; U2OS; hESCs; MT4; GSC-11; endometrial; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000477270.5; ENST00000460510.5; ENST00000357339.6; ENST00000488877.5; ENST00000494410.5; ENST00000612663.5; ENST00000355279.2; ENST00000355740.7; ENST00000484444.5; ENST00000492756.5; ENST00000352159.8; ENST00000479522.5; ENST00000652046.1 | ||
| External Link | RMBase: m6A_site_109519 | ||
| mod ID: M6ASITE001334 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991229-88991230:+ | [7] | |
| Sequence | GAGGTGGGCGTGGGGTGCGGACAGGAATTGAAGCGGAAGTC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; GSC-11; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000477270.5; ENST00000479522.5; ENST00000484444.5; ENST00000492756.5; ENST00000357339.6; ENST00000352159.8; ENST00000460510.5; ENST00000355740.7; ENST00000652046.1; ENST00000488877.5; ENST00000494410.5; ENST00000612663.5; ENST00000355279.2 | ||
| External Link | RMBase: m6A_site_109520 | ||
| mod ID: M6ASITE001336 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991278-88991279:+ | [7] | |
| Sequence | TTTAGGGTCGCTGGAGGGGGACCCCGGTTGGAGAGAGGAGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; MSC; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000477270.5; ENST00000612663.5; ENST00000484444.5; ENST00000652046.1; ENST00000494410.5; ENST00000355740.7; ENST00000355279.2; ENST00000352159.8; ENST00000357339.6; ENST00000492756.5; ENST00000460510.5; ENST00000488877.5; ENST00000479522.5 | ||
| External Link | RMBase: m6A_site_109522 | ||
| mod ID: M6ASITE001337 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991302-88991303:+ | [7] | |
| Sequence | CGGTTGGAGAGAGGAGCGGAACTCCTGGACAAGCCCTGACA | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; MSC; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000492756.5; ENST00000460510.5; ENST00000355279.2; ENST00000494410.5; ENST00000352159.8; ENST00000357339.6; ENST00000488877.5; ENST00000477270.5; ENST00000313771.9; ENST00000479522.5; ENST00000652046.1; ENST00000484444.5; ENST00000355740.7; ENST00000612663.5 | ||
| External Link | RMBase: m6A_site_109523 | ||
| mod ID: M6ASITE001338 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991310-88991311:+ | [7] | |
| Sequence | GAGAGGAGCGGAACTCCTGGACAAGCCCTGACAAGCCAAGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; MT4; MSC; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000479522.5; ENST00000313771.9; ENST00000494410.5; ENST00000357339.6; ENST00000460510.5; ENST00000492756.5; ENST00000355740.7; ENST00000477270.5; ENST00000352159.8; ENST00000488877.5; ENST00000484444.5; ENST00000355279.2; ENST00000612663.5; ENST00000652046.1 | ||
| External Link | RMBase: m6A_site_109524 | ||
| mod ID: M6ASITE001340 | Click to Show/Hide the Full List | ||
| mod site | chr10:88991407-88991408:+ | [7] | |
| Sequence | GAGAGCCTGCAGCCTTCAGAACAGATATTGCTCATTTTCTG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000488877.5; ENST00000355740.7; ENST00000313771.9; ENST00000355279.2; ENST00000494410.5; ENST00000484444.5; ENST00000352159.8; ENST00000612663.5; ENST00000479522.5; ENST00000652046.1; ENST00000477270.5; ENST00000492756.5; ENST00000460510.5; ENST00000357339.6 | ||
| External Link | RMBase: m6A_site_109526 | ||
| mod ID: M6ASITE001341 | Click to Show/Hide the Full List | ||
| mod site | chr10:89007780-89007781:+ | [8] | |
| Sequence | AGAAGGGAAGGAGTACACAGACAAAGCCCATTTTTCTTCCA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000640140.1; ENST00000494799.5; ENST00000355740.7; ENST00000640681.1; ENST00000487314.1; ENST00000477270.5; ENST00000494410.5; ENST00000652046.1; ENST00000460510.5; ENST00000371857.7; ENST00000355279.2; ENST00000488877.5; ENST00000612663.5; ENST00000492756.5; ENST00000466081.5; ENST00000484444.5; ENST00000352159.8; ENST00000479522.5; ENST00000313771.9; ENST00000357339.6 | ||
| External Link | RMBase: m6A_site_109527 | ||
| mod ID: M6ASITE001342 | Click to Show/Hide the Full List | ||
| mod site | chr10:89007832-89007833:+ | [8] | |
| Sequence | TGTAGATTGTGTGATGAAGGACATGGTAAGAGTCTTAAAAT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000484444.5; ENST00000313771.9; ENST00000640681.1; ENST00000494410.5; ENST00000479522.5; ENST00000355740.7; ENST00000488877.5; ENST00000640140.1; ENST00000612663.5; ENST00000371857.7; ENST00000487314.1; ENST00000355279.2; ENST00000460510.5; ENST00000652046.1; ENST00000492756.5; ENST00000466081.5; ENST00000352159.8; ENST00000477270.5; ENST00000357339.6; ENST00000494799.5 | ||
| External Link | RMBase: m6A_site_109528 | ||
| mod ID: M6ASITE001343 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014162-89014163:+ | [8] | |
| Sequence | CCACTATTGCTGGAGTCATGACACTAAGTCAAGTTAAAGGC | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000494799.5; ENST00000488877.5; ENST00000313771.9; ENST00000640140.1; ENST00000492756.5; ENST00000640250.1; ENST00000352159.8; ENST00000479522.5; ENST00000484444.5; ENST00000640681.1; ENST00000612663.5; ENST00000652046.1; ENST00000355279.2; ENST00000357339.6; ENST00000355740.7; ENST00000494410.5 | ||
| External Link | RMBase: m6A_site_109529 | ||
| mod ID: M6ASITE001344 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014247-89014248:+ | [9] | |
| Sequence | CAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HEK293T; HeLa; fibroblasts; A549; GM12878; HEK293A-TOA | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000479522.5; ENST00000652046.1; ENST00000640681.1; ENST00000488877.5; ENST00000355740.7; ENST00000640250.1; ENST00000352159.8; ENST00000494410.5; ENST00000612663.5; ENST00000357339.6; ENST00000355279.2; ENST00000484444.5; ENST00000492756.5; ENST00000640140.1 | ||
| External Link | RMBase: m6A_site_109530 | ||
| mod ID: M6ASITE001345 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014257-89014258:+ | [9] | |
| Sequence | AATGTCCAAGACACAGCAGAACAGAAAGTTCAACTGCTTCG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HEK293T; HeLa; fibroblasts; A549; GM12878; HEK293A-TOA | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000357339.6; ENST00000352159.8; ENST00000492756.5; ENST00000479522.5; ENST00000355740.7; ENST00000355279.2; ENST00000640250.1; ENST00000640681.1; ENST00000494410.5; ENST00000652046.1; ENST00000612663.5; ENST00000484444.5; ENST00000488877.5; ENST00000640140.1 | ||
| External Link | RMBase: m6A_site_109531 | ||
| mod ID: M6ASITE001346 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014375-89014376:+ | [7] | |
| Sequence | CTCTTGCAGAGAAAATTCAGACTATCATCCTCAAGGACATT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; LCLs; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000492756.5; ENST00000652046.1; ENST00000479522.5; ENST00000640250.1; ENST00000640681.1; ENST00000357339.6; ENST00000352159.8; ENST00000494410.5; ENST00000355279.2; ENST00000355740.7; ENST00000640140.1; ENST00000484444.5; ENST00000612663.5; ENST00000488877.5 | ||
| External Link | RMBase: m6A_site_109532 | ||
| mod ID: M6ASITE001347 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014391-89014392:+ | [7] | |
| Sequence | TCAGACTATCATCCTCAAGGACATTACTAGTGACTCAGAAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; LCLs; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; AML | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP; miCLIP | ||
| Transcript ID List | ENST00000484444.5; ENST00000357339.6; ENST00000612663.5; ENST00000640681.1; ENST00000488877.5; ENST00000640250.1; ENST00000640140.1; ENST00000355740.7; ENST00000352159.8; ENST00000355279.2; ENST00000652046.1; ENST00000494410.5; ENST00000492756.5; ENST00000479522.5 | ||
| External Link | RMBase: m6A_site_109533 | ||
| mod ID: M6ASITE001348 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014403-89014404:+ | [10] | |
| Sequence | CCTCAAGGACATTACTAGTGACTCAGAAAATTCAAACTTCA | ||
| Motif Score | 3.28175 | ||
| Cell/Tissue List | A549 | ||
| Seq Type List | m6A-CLIP/IP | ||
| Transcript ID List | ENST00000640681.1; ENST00000352159.8; ENST00000355740.7; ENST00000484444.5; ENST00000612663.5; ENST00000494410.5; ENST00000640140.1; ENST00000479522.5; ENST00000357339.6; ENST00000355279.2; ENST00000652046.1; ENST00000492756.5; ENST00000640250.1; ENST00000488877.5 | ||
| External Link | RMBase: m6A_site_109534 | ||
| mod ID: M6ASITE001349 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014418-89014419:+ | [7] | |
| Sequence | TAGTGACTCAGAAAATTCAAACTTCAGAAATGAAATCCAAA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; U2OS; hESCs; fibroblasts; A549; GM12878; LCLs; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000640140.1; ENST00000488877.5; ENST00000640250.1; ENST00000357339.6; ENST00000492756.5; ENST00000479522.5; ENST00000612663.5; ENST00000494410.5; ENST00000352159.8; ENST00000484444.5; ENST00000355740.7; ENST00000640681.1; ENST00000355279.2; ENST00000652046.1 | ||
| External Link | RMBase: m6A_site_109535 | ||
| mod ID: M6ASITE001350 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014458-89014459:+ | [7] | |
| Sequence | AGCTTGGTCTAGAGTGAAAAACAACAAATTCAGTTCTGAGT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; hESC-HEK293T; U2OS; hESCs; fibroblasts; A549; GM12878; LCLs; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000640140.1; ENST00000640250.1; ENST00000352159.8; ENST00000652046.1; ENST00000355740.7; ENST00000494410.5; ENST00000640681.1; ENST00000484444.5; ENST00000612663.5; ENST00000479522.5 | ||
| External Link | RMBase: m6A_site_109536 | ||
| mod ID: M6ASITE001351 | Click to Show/Hide the Full List | ||
| mod site | chr10:89014865-89014866:+ | [7] | |
| Sequence | GCTGAAATATCAGTTACTGAACAGGCAGGCCACTTTGCCTC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000640250.1; ENST00000352159.8; ENST00000355740.7; ENST00000652046.1; ENST00000640681.1; ENST00000640140.1 | ||
| External Link | RMBase: m6A_site_109537 | ||
References