General Information of the m6A Target Gene (ID: M6ATAR00213)
Target Name Cyclin-dependent kinase inhibitor 1 (CDKN1A)
Synonyms
CDK-interacting protein 1; Melanoma differentiation-associated protein 6; MDA-6; p21; CAP20; CDKN1; CIP1; MDA6; PIC1; SDI1; WAF1
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Gene Name CDKN1A
Chromosomal Location 6p21.2
Family CDI family
Function
May be involved in p53/TP53 mediated inhibition of cellular proliferation in response to DNA damage. Binds to and inhibits cyclin-dependent kinase activity, preventing phosphorylation of critical cyclin-dependent kinase substrates and blocking cell cycle progression. Functions in the nuclear localization and assembly of cyclin D-CDK4 complex and promotes its kinase activity towards RB1. At higher stoichiometric ratios, inhibits the kinase activity of the cyclin D-CDK4 complex. Inhibits DNA synthesis by DNA polymerase delta by competing with POLD3 for PCNA binding. Plays an important role in controlling cell cycle progression and DNA damage-induced G2 arrest.
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Gene ID 1026
Uniprot ID
CDN1A_HUMAN
HGNC ID
HGNC:1784
KEGG ID
hsa:1026
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
CDKN1A can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line LX2 cell line Homo sapiens
Treatment: shMETTL3 LX2 cells
Control: shLuc LX2 cells
GSE207909
Regulation
logFC: 7.88E-01
p-value: 3.07E-21
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between CDKN1A and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 9.39E+00 GSE60213
In total 3 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3 and METTL14 play an oncogenic role in acute myeloid leukemia(AML) by targeting mdm2/p53 signal pathway. The knockdown of METTL3 and METTL14 in K562 cell line leads to several changes in the expression of p53 signal pathway, including the upregulation of p53, cyclin dependent kinase inhibitor 1A (CDKN1A/Cyclin-dependent kinase inhibitor 1 (CDKN1A)), and downregulation of mdm2.
Target Regulation Up regulation
Responsed Disease Acute myeloid leukaemia ICD-11: 2A60
Pathway Response p53 signaling pathway hsa04115
Cell cycle hsa04110
Cell Process Cell apoptosis
Cells in G4/M phase decreased
In-vitro Model THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
MOLT-4 Adult T acute lymphoblastic leukemia Homo sapiens CVCL_0013
Kasumi-1 Myeloid leukemia with maturation Homo sapiens CVCL_0589
K-562 Chronic myelogenous leukemia Homo sapiens CVCL_0004
HL-60 Adult acute myeloid leukemia Homo sapiens CVCL_0002
HEL Erythroleukemia Homo sapiens CVCL_0001
CCRF-CEM C7 T acute lymphoblastic leukemia Homo sapiens CVCL_6825
HEK293T Normal Homo sapiens CVCL_0063
Experiment 2 Reporting the m6A Methylation Regulator of This Target Gene [2]
Response Summary METTL3 modulates the cell cycle of Esophageal squamous cell carcinoma(ESCC) cells through a Cyclin-dependent kinase inhibitor 1 (CDKN1A)-dependent pattern. METTL3-guided m6A modification contributes to the progression of ESCC via the p21-axis.
Target Regulation Down regulation
Responsed Disease Esophageal squamous cell carcinoma ICD-11: 2B70.1
Pathway Response Cell cycle hsa04110
Cell Process Arrest cell cycle at G2/M phase
In-vitro Model TE-1 Esophageal squamous cell carcinoma Homo sapiens CVCL_1759
KYSE-150 Esophageal squamous cell carcinoma Homo sapiens CVCL_1348
In-vivo Model Totally 5 × 106 ESCC cells after treatment were administered to randomized animals by the subcutaneous route (right flank) in 200 uL DMEM. Tumor measurement was performed every other day. At study end (at least 3 weeks), the animals underwent euthanasia, and the tumors were extracted for histology.
Experiment 3 Reporting the m6A Methylation Regulator of This Target Gene [3]
Response Summary METTL3 is able to promote breast cancer cell proliferation by regulating the Cyclin-dependent kinase inhibitor 1 (CDKN1A) expression by an m6A-dependent manner. Metformin can take p21 as the main target to inhibit such effect.
Target Regulation Down regulation
Responsed Disease Breast cancer ICD-11: 2C60
In-vitro Model ZR-75-1 Invasive breast carcinoma Homo sapiens CVCL_0588
SUM1315MO2 Invasive breast carcinoma of no special type Homo sapiens CVCL_5589
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MCF-10A Normal Homo sapiens CVCL_0598
HBL-100 Normal Homo sapiens CVCL_4362
BT-474 Invasive breast carcinoma Homo sapiens CVCL_0179
In-vivo Model About 1 × 107 stable METTL3 overexpression and negative control SUM-1315 cells were injected subcutaneously into the axilla of the female BALB/C nude mice (4-6 weeks old, 18-20 g, 10 mice/group). One week after injection, the two groups, METTL3 OE and NC, were then randomly allocated into the control group and experimental group (5 mice/group), which were treated with PBS or metformin (250 mg/kg/dose, respectively). PBS or metformin was administered every 2 days via intraperitoneal injection.
Fat mass and obesity-associated protein (FTO) [ERASER]
Representative RNA-seq result indicating the expression of this target gene regulated by FTO
Cell Line 253J cell line Homo sapiens
Treatment: siFTO 253J cells
Control: 253J cells
GSE150239
Regulation
logFC: 9.72E-01
p-value: 1.24E-24
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [4]
Response Summary The elevated FTO in esophageal squamous cell carcinoma decreased m6A methylation of LINC00022 transcript, leading to the inhibition of LINC00022 decay via the m6A reader YTHDF2. LINC00022 directly binds to Cyclin-dependent kinase inhibitor 1 (CDKN1A) protein and promotes its ubiquitination-mediated degradation, thereby facilitating cell-cycle progression and proliferation.
Responsed Disease Esophageal squamous cell carcinoma ICD-11: 2B70.1
Pathway Response Cell cycle hsa04110
Ubiquitin mediated proteolysis hsa04120
Cell Process Ubiquitination degradation
Cell apoptosis
Decreased G0/G1 phase
In-vitro Model HET-1A Normal Homo sapiens CVCL_3702
KYSE-150 Esophageal squamous cell carcinoma Homo sapiens CVCL_1348
KYSE-450 Esophageal squamous cell carcinoma Homo sapiens CVCL_1353
KYSE-70 Esophageal squamous cell carcinoma Homo sapiens CVCL_1356
TE-1 Esophageal squamous cell carcinoma Homo sapiens CVCL_1759
In-vivo Model The number of cells inoculated in each mouse was 4 × 106, 1 × 106, 2 × 106 and 1 × 106, respectively.
Methyltransferase-like 14 (METTL14) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL14
Cell Line Neural progenitor cell line Mus musculus
Treatment: METTL14 knockout NPCs
Control: Wild type NPCs
GSE158985
Regulation
logFC: -9.21E-01
p-value: 1.04E-03
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3 and METTL14 play an oncogenic role in acute myeloid leukemia(AML) by targeting mdm2/p53 signal pathway. The knockdown of METTL3 and METTL14 in K562 cell line leads to several changes in the expression of p53 signal pathway, including the upregulation of p53, cyclin dependent kinase inhibitor 1A (CDKN1A/Cyclin-dependent kinase inhibitor 1 (CDKN1A)), and downregulation of mdm2.
Target Regulation Up regulation
Responsed Disease Acute myeloid leukaemia ICD-11: 2A60
Pathway Response p53 signaling pathway hsa04115
Cell cycle hsa04110
Cell Process Cell apoptosis
Cells in G7/M phase decreased
In-vitro Model THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
MOLT-4 Adult T acute lymphoblastic leukemia Homo sapiens CVCL_0013
Kasumi-1 Myeloid leukemia with maturation Homo sapiens CVCL_0589
K-562 Chronic myelogenous leukemia Homo sapiens CVCL_0004
HL-60 Adult acute myeloid leukemia Homo sapiens CVCL_0002
HEL Erythroleukemia Homo sapiens CVCL_0001
CCRF-CEM C7 T acute lymphoblastic leukemia Homo sapiens CVCL_6825
HEK293T Normal Homo sapiens CVCL_0063
RNA demethylase ALKBH5 (ALKBH5) [ERASER]
Representative RNA-seq result indicating the expression of this target gene regulated by ALKBH5
Cell Line CAG cell line Homo sapiens
Treatment: shALKBH5 CAG cells
Control: shNC CAG cells
GSE180214
Regulation
logFC: -1.90E+00
p-value: 1.35E-05
More Results Click to View More RNA-seq Results
In total 2 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [5]
Response Summary Expression of CDKN1A (p21) was significantly up-regulated in ALKBH5-depleted cells, and m6 A modification and stability of Cyclin-dependent kinase inhibitor 1 (CDKN1A) mRNA were increased by ALKBH5 knockdown. Identify ALKBH5 as the first m6 A demethylase that accelerates cell cycle progression and promotes cell proliferation of ESCC cells, which is associated with poor prognosis of esophageal squamous cell carcinoma patients.
Target Regulation Down regulation
Responsed Disease Esophageal squamous cell carcinoma ICD-11: 2B70.1
Pathway Response Cell cycle hsa04110
Cell Process Cell cycle
Cell apoptosis
In-vitro Model OE21 Esophageal squamous cell carcinoma Homo sapiens CVCL_2661
TE-1 Esophageal squamous cell carcinoma Homo sapiens CVCL_1759
TE-5 Esophageal squamous cell carcinoma Homo sapiens CVCL_1764
TE-9 Esophageal squamous cell carcinoma Homo sapiens CVCL_1767
In-vivo Model The OE21 cells were stably transfected with sh-ALKBH5 (#1), sh-ALKBH5 (#2) or sh-scramble as negative control and injected (2 × 106 cells/mouse in 100 uL volume) subcutaneously into the back of male athymic BALB/c nude mice (6 weeks old, Japan SLC).
Experiment 2 Reporting the m6A Methylation Regulator of This Target Gene [6]
Response Summary The expression of Cyclin-dependent kinase inhibitor 1 (CDKN1A) or TIMP3 was increased by ALKBH5 knockdown. In conclusions, the ALKBH5-IGF2BPs axis promotes cell proliferation and tumorigenicity, which in turn causes the unfavorable prognosis of NSCLC.
Target Regulation Down regulation
Responsed Disease Non-small-cell lung carcinoma ICD-11: 2C25.Y
Pathway Response Cell cycle hsa04110
Cell Process Arrest cell cycle at G1 phase
In-vitro Model NCI-H1299 Lung large cell carcinoma Homo sapiens CVCL_0060
NCI-H460 Lung large cell carcinoma Homo sapiens CVCL_0459
NCI-H2087 Lung adenocarcinoma Homo sapiens CVCL_1524
A-549 Lung adenocarcinoma Homo sapiens CVCL_0023
ABC-1 Lung adenocarcinoma Homo sapiens CVCL_1066
NCI-H358 Minimally invasive lung adenocarcinoma Homo sapiens CVCL_1559
BEAS-2B Normal Homo sapiens CVCL_0168
HEK293 Normal Homo sapiens CVCL_0045
PC-3 [Human lung carcinoma] Lung adenocarcinoma Homo sapiens CVCL_S982
PC-9 Lung adenocarcinoma Homo sapiens CVCL_B260
RERF-LC-MS Lung adenocarcinoma Homo sapiens CVCL_1655
HLC-1 Lung adenocarcinoma Homo sapiens CVCL_5529
LC-2/ad Lung adenocarcinoma Homo sapiens CVCL_1373
YTH domain-containing protein 2 (YTHDC2) [READER]
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [12]
Response Summary Knockdown of YTHDC2 substantially promoted the proliferation rate of esophageal squamous cell carcinoma cells by affecting several cancer-related signaling pathways.
Target Regulation Up regulation
Responsed Disease Esophageal squamous cell carcinoma ICD-11: 2B70.1
Pathway Response p53 signaling pathway hsa04115
NF-kappa B signaling pathway hsa04064
JAK-STAT signaling pathway hsa04630
Cell Process Genetic variants
In-vitro Model KYSE-150 Esophageal squamous cell carcinoma Homo sapiens CVCL_1348
KYSE-30 Esophageal squamous cell carcinoma Homo sapiens CVCL_1351
Acute myeloid leukaemia [ICD-11: 2A60]
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3 and METTL14 play an oncogenic role in acute myeloid leukemia(AML) by targeting mdm2/p53 signal pathway. The knockdown of METTL3 and METTL14 in K562 cell line leads to several changes in the expression of p53 signal pathway, including the upregulation of p53, cyclin dependent kinase inhibitor 1A (CDKN1A/Cyclin-dependent kinase inhibitor 1 (CDKN1A)), and downregulation of mdm2.
Responsed Disease Acute myeloid leukaemia [ICD-11: 2A60]
Target Regulator Methyltransferase-like 14 (METTL14) WRITER
Target Regulation Up regulation
Pathway Response p53 signaling pathway hsa04115
Cell cycle hsa04110
Cell Process Cell apoptosis
Cells in G7/M phase decreased
In-vitro Model THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
MOLT-4 Adult T acute lymphoblastic leukemia Homo sapiens CVCL_0013
Kasumi-1 Myeloid leukemia with maturation Homo sapiens CVCL_0589
K-562 Chronic myelogenous leukemia Homo sapiens CVCL_0004
HL-60 Adult acute myeloid leukemia Homo sapiens CVCL_0002
HEL Erythroleukemia Homo sapiens CVCL_0001
CCRF-CEM C7 T acute lymphoblastic leukemia Homo sapiens CVCL_6825
HEK293T Normal Homo sapiens CVCL_0063
Experiment 2 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3 and METTL14 play an oncogenic role in acute myeloid leukemia(AML) by targeting mdm2/p53 signal pathway. The knockdown of METTL3 and METTL14 in K562 cell line leads to several changes in the expression of p53 signal pathway, including the upregulation of p53, cyclin dependent kinase inhibitor 1A (CDKN1A/Cyclin-dependent kinase inhibitor 1 (CDKN1A)), and downregulation of mdm2.
Responsed Disease Acute myeloid leukaemia [ICD-11: 2A60]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Pathway Response p53 signaling pathway hsa04115
Cell cycle hsa04110
Cell Process Cell apoptosis
Cells in G4/M phase decreased
In-vitro Model THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
MOLT-4 Adult T acute lymphoblastic leukemia Homo sapiens CVCL_0013
Kasumi-1 Myeloid leukemia with maturation Homo sapiens CVCL_0589
K-562 Chronic myelogenous leukemia Homo sapiens CVCL_0004
HL-60 Adult acute myeloid leukemia Homo sapiens CVCL_0002
HEL Erythroleukemia Homo sapiens CVCL_0001
CCRF-CEM C7 T acute lymphoblastic leukemia Homo sapiens CVCL_6825
HEK293T Normal Homo sapiens CVCL_0063
Esophageal cancer [ICD-11: 2B70]
In total 4 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [4]
Response Summary The elevated FTO in esophageal squamous cell carcinoma decreased m6A methylation of LINC00022 transcript, leading to the inhibition of LINC00022 decay via the m6A reader YTHDF2. LINC00022 directly binds to Cyclin-dependent kinase inhibitor 1 (CDKN1A) protein and promotes its ubiquitination-mediated degradation, thereby facilitating cell-cycle progression and proliferation.
Responsed Disease Esophageal squamous cell carcinoma [ICD-11: 2B70.1]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Pathway Response Cell cycle hsa04110
Ubiquitin mediated proteolysis hsa04120
Cell Process Ubiquitination degradation
Cell apoptosis
Decreased G0/G1 phase
In-vitro Model HET-1A Normal Homo sapiens CVCL_3702
KYSE-150 Esophageal squamous cell carcinoma Homo sapiens CVCL_1348
KYSE-450 Esophageal squamous cell carcinoma Homo sapiens CVCL_1353
KYSE-70 Esophageal squamous cell carcinoma Homo sapiens CVCL_1356
TE-1 Esophageal squamous cell carcinoma Homo sapiens CVCL_1759
In-vivo Model The number of cells inoculated in each mouse was 4 × 106, 1 × 106, 2 × 106 and 1 × 106, respectively.
Experiment 2 Reporting the m6A-centered Disease Response [2]
Response Summary METTL3 modulates the cell cycle of Esophageal squamous cell carcinoma(ESCC) cells through a Cyclin-dependent kinase inhibitor 1 (CDKN1A)-dependent pattern. METTL3-guided m6A modification contributes to the progression of ESCC via the p21-axis.
Responsed Disease Esophageal squamous cell carcinoma [ICD-11: 2B70.1]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
Pathway Response Cell cycle hsa04110
Cell Process Arrest cell cycle at G2/M phase
In-vitro Model TE-1 Esophageal squamous cell carcinoma Homo sapiens CVCL_1759
KYSE-150 Esophageal squamous cell carcinoma Homo sapiens CVCL_1348
In-vivo Model Totally 5 × 106 ESCC cells after treatment were administered to randomized animals by the subcutaneous route (right flank) in 200 uL DMEM. Tumor measurement was performed every other day. At study end (at least 3 weeks), the animals underwent euthanasia, and the tumors were extracted for histology.
Experiment 3 Reporting the m6A-centered Disease Response [5]
Response Summary Expression of CDKN1A (p21) was significantly up-regulated in ALKBH5-depleted cells, and m6 A modification and stability of Cyclin-dependent kinase inhibitor 1 (CDKN1A) mRNA were increased by ALKBH5 knockdown. Identify ALKBH5 as the first m6 A demethylase that accelerates cell cycle progression and promotes cell proliferation of ESCC cells, which is associated with poor prognosis of esophageal squamous cell carcinoma patients.
Responsed Disease Esophageal squamous cell carcinoma [ICD-11: 2B70.1]
Target Regulator RNA demethylase ALKBH5 (ALKBH5) ERASER
Target Regulation Down regulation
Pathway Response Cell cycle hsa04110
Cell Process Cell cycle
Cell apoptosis
In-vitro Model OE21 Esophageal squamous cell carcinoma Homo sapiens CVCL_2661
TE-1 Esophageal squamous cell carcinoma Homo sapiens CVCL_1759
TE-5 Esophageal squamous cell carcinoma Homo sapiens CVCL_1764
TE-9 Esophageal squamous cell carcinoma Homo sapiens CVCL_1767
In-vivo Model The OE21 cells were stably transfected with sh-ALKBH5 (#1), sh-ALKBH5 (#2) or sh-scramble as negative control and injected (2 × 106 cells/mouse in 100 uL volume) subcutaneously into the back of male athymic BALB/c nude mice (6 weeks old, Japan SLC).
Experiment 4 Reporting the m6A-centered Disease Response [12]
Response Summary Knockdown of YTHDC2 substantially promoted the proliferation rate of esophageal squamous cell carcinoma cells by affecting several cancer-related signaling pathways.
Responsed Disease Esophageal squamous cell carcinoma [ICD-11: 2B70.1]
Target Regulator YTH domain-containing protein 2 (YTHDC2) READER
Target Regulation Up regulation
Pathway Response p53 signaling pathway hsa04115
NF-kappa B signaling pathway hsa04064
JAK-STAT signaling pathway hsa04630
Cell Process Genetic variants
In-vitro Model KYSE-150 Esophageal squamous cell carcinoma Homo sapiens CVCL_1348
KYSE-30 Esophageal squamous cell carcinoma Homo sapiens CVCL_1351
Lung cancer [ICD-11: 2C25]
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response []
Response Summary In lung squamous cell carcinoma, seven m6A-related autophagy genes were screened to construct a prognostic model: CASP4, Cyclin-dependent kinase inhibitor 1 (CDKN1A), DLC1, ITGB1, PINK1, TP63, and EIF4EBP1.
Responsed Disease Lung squamous cell carcinoma [ICD-11: 2C25.2]
Pathway Response Autophagy hsa04140
Cell Process Cell proliferation and metastasis
Cell autophagy
Experiment 2 Reporting the m6A-centered Disease Response [6]
Response Summary The expression of Cyclin-dependent kinase inhibitor 1 (CDKN1A) or TIMP3 was increased by ALKBH5 knockdown. In conclusions, the ALKBH5-IGF2BPs axis promotes cell proliferation and tumorigenicity, which in turn causes the unfavorable prognosis of NSCLC.
Responsed Disease Non-small-cell lung carcinoma [ICD-11: 2C25.Y]
Target Regulator RNA demethylase ALKBH5 (ALKBH5) ERASER
Target Regulation Down regulation
Pathway Response Cell cycle hsa04110
Cell Process Arrest cell cycle at G1 phase
In-vitro Model NCI-H1299 Lung large cell carcinoma Homo sapiens CVCL_0060
NCI-H460 Lung large cell carcinoma Homo sapiens CVCL_0459
NCI-H2087 Lung adenocarcinoma Homo sapiens CVCL_1524
A-549 Lung adenocarcinoma Homo sapiens CVCL_0023
ABC-1 Lung adenocarcinoma Homo sapiens CVCL_1066
NCI-H358 Minimally invasive lung adenocarcinoma Homo sapiens CVCL_1559
BEAS-2B Normal Homo sapiens CVCL_0168
HEK293 Normal Homo sapiens CVCL_0045
PC-3 [Human lung carcinoma] Lung adenocarcinoma Homo sapiens CVCL_S982
PC-9 Lung adenocarcinoma Homo sapiens CVCL_B260
RERF-LC-MS Lung adenocarcinoma Homo sapiens CVCL_1655
HLC-1 Lung adenocarcinoma Homo sapiens CVCL_5529
LC-2/ad Lung adenocarcinoma Homo sapiens CVCL_1373
Breast cancer [ICD-11: 2C60]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [3]
Response Summary METTL3 is able to promote breast cancer cell proliferation by regulating the Cyclin-dependent kinase inhibitor 1 (CDKN1A) expression by an m6A-dependent manner. Metformin can take p21 as the main target to inhibit such effect.
Responsed Disease Breast cancer [ICD-11: 2C60]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Down regulation
In-vitro Model ZR-75-1 Invasive breast carcinoma Homo sapiens CVCL_0588
SUM1315MO2 Invasive breast carcinoma of no special type Homo sapiens CVCL_5589
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MCF-10A Normal Homo sapiens CVCL_0598
HBL-100 Normal Homo sapiens CVCL_4362
BT-474 Invasive breast carcinoma Homo sapiens CVCL_0179
In-vivo Model About 1 × 107 stable METTL3 overexpression and negative control SUM-1315 cells were injected subcutaneously into the axilla of the female BALB/C nude mice (4-6 weeks old, 18-20 g, 10 mice/group). One week after injection, the two groups, METTL3 OE and NC, were then randomly allocated into the control group and experimental group (5 mice/group), which were treated with PBS or metformin (250 mg/kg/dose, respectively). PBS or metformin was administered every 2 days via intraperitoneal injection.
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
RNA modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00001
Epigenetic Regulator RNA cytosine C(5)-methyltransferase NSUN2 (NSUN2)
Regulated Target Cyclin-dependent kinase inhibitor 1 (CDKN1A)
Crosstalk relationship m5C → m6A
m6A Regulator: Methyltransferase-like 14 (METTL14)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00002
Epigenetic Regulator RNA cytosine C(5)-methyltransferase NSUN2 (NSUN2)
Regulated Target Cyclin-dependent kinase inhibitor 1 (CDKN1A)
Crosstalk relationship m5C → m6A
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03372
Regulated Target Histone H3 lysine 18 lactylation (H3K18la)
Crosstalk relationship Histone modification → m6A
Disease Esophageal Squamous Cell Carcinoma
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00213)
Cyclin-dependent kinase inhibitor 1 (CDKN1A)
Adenosine-to-Inosine editing (A-to-I)
In total 6 m6A sequence/site(s) in this target gene
mod ID: A2ISITE001436 Click to Show/Hide the Full List
mod site chr6:36682188-36682189:+ [13]
Sequence CTTATGAACTGTGTGATGTTAGGCAAGTTACTTAACTTATC
Transcript ID List ENST00000405375.5; ENST00000459970.1; ENST00000615513.4; ENST00000244741.9; ENST00000373711.3; ENST00000448526.6; ENST00000478800.1; rmsk_1919667
External Link RMBase: RNA-editing_site_115776
mod ID: A2ISITE001437 Click to Show/Hide the Full List
mod site chr6:36682197-36682198:+ [13]
Sequence TGTGTGATGTTAGGCAAGTTACTTAACTTATCTGAGCCTTG
Transcript ID List ENST00000615513.4; ENST00000244741.9; ENST00000448526.6; ENST00000459970.1; rmsk_1919667; ENST00000373711.3; ENST00000478800.1; ENST00000405375.5
External Link RMBase: RNA-editing_site_115777
mod ID: A2ISITE001438 Click to Show/Hide the Full List
mod site chr6:36682206-36682207:+ [13]
Sequence TTAGGCAAGTTACTTAACTTATCTGAGCCTTGGTTGCCTCT
Transcript ID List ENST00000448526.6; ENST00000478800.1; ENST00000459970.1; ENST00000244741.9; ENST00000405375.5; ENST00000615513.4; ENST00000373711.3; rmsk_1919667
External Link RMBase: RNA-editing_site_115778
mod ID: A2ISITE001439 Click to Show/Hide the Full List
mod site chr6:36683265-36683266:+ [13]
Sequence GAGGAAACTAGAGCTCAGACAAGTTAAGTTGCTTGCCCAGG
Transcript ID List ENST00000373711.3; ENST00000405375.5; ENST00000615513.4; ENST00000478800.1; ENST00000459970.1; ENST00000448526.6; ENST00000244741.9
External Link RMBase: RNA-editing_site_115779
mod ID: A2ISITE001440 Click to Show/Hide the Full List
mod site chr6:36683266-36683267:+ [13]
Sequence AGGAAACTAGAGCTCAGACAAGTTAAGTTGCTTGCCCAGGG
Transcript ID List ENST00000478800.1; ENST00000459970.1; ENST00000615513.4; ENST00000448526.6; ENST00000244741.9; ENST00000373711.3; ENST00000405375.5
External Link RMBase: RNA-editing_site_115780
mod ID: A2ISITE001441 Click to Show/Hide the Full List
mod site chr6:36684876-36684877:+ [13]
Sequence GTCTTAACTCTGTTGGCCAGACTGGAGTGCAGTGATACGAT
Transcript ID List ENST00000448526.6; ENST00000373711.3; ENST00000615513.4; ENST00000405375.5; ENST00000244741.9
External Link RMBase: RNA-editing_site_115781
N6-methyladenosine (m6A)
In total 46 m6A sequence/site(s) in this target gene
mod ID: M6ASITE074863 Click to Show/Hide the Full List
mod site chr6:36676546-36676547:+ [14]
Sequence GAGGAAGGGGATGGTAGGAGACAGGAGACCTCTAAAGACCC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000448526.6; ENST00000615513.4; ENST00000459970.1
External Link RMBase: m6A_site_715130
mod ID: M6ASITE074864 Click to Show/Hide the Full List
mod site chr6:36676553-36676554:+ [14]
Sequence GGGATGGTAGGAGACAGGAGACCTCTAAAGACCCCAGGTAA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000459970.1; ENST00000615513.4; ENST00000448526.6
External Link RMBase: m6A_site_715131
mod ID: M6ASITE074865 Click to Show/Hide the Full List
mod site chr6:36676563-36676564:+ [14]
Sequence GAGACAGGAGACCTCTAAAGACCCCAGGTAAACCTTAGCCT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000615513.4; ENST00000448526.6; ENST00000459970.1
External Link RMBase: m6A_site_715132
mod ID: M6ASITE074866 Click to Show/Hide the Full List
mod site chr6:36677795-36677796:+ [14]
Sequence GATCTGAGTTAGGTCACCAGACTTCTCTGAGCCCCAGTTTC
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000459970.1; rmsk_1919658; ENST00000448526.6; ENST00000615513.4
External Link RMBase: m6A_site_715133
mod ID: M6ASITE074867 Click to Show/Hide the Full List
mod site chr6:36677856-36677857:+ [14]
Sequence ATGTGGGGAGTATTCAGGAGACAGACAACTCACTCGTCAAA
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000448526.6; ENST00000459970.1; ENST00000615513.4
External Link RMBase: m6A_site_715134
mod ID: M6ASITE074868 Click to Show/Hide the Full List
mod site chr6:36678816-36678817:+ [14]
Sequence AGGTGAGAGAGCGGCGGCAGACAACAGGGGACCCCGGGCCG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; A549; MT4; CD4T; peripheral-blood; GSC-11; HEK293T; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000478800.1; ENST00000459970.1; ENST00000615513.4; ENST00000373711.3; ENST00000405375.5; ENST00000462537.3; ENST00000448526.6; ENST00000244741.9
External Link RMBase: m6A_site_715135
mod ID: M6ASITE074869 Click to Show/Hide the Full List
mod site chr6:36678826-36678827:+ [14]
Sequence GCGGCGGCAGACAACAGGGGACCCCGGGCCGGCGGCCCAGA
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; MT4; CD4T; peripheral-blood; GSC-11; HEK293T; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000615513.4; ENST00000478800.1; ENST00000373711.3; ENST00000459970.1; ENST00000462537.3; ENST00000405375.5; ENST00000448526.6; ENST00000244741.9
External Link RMBase: m6A_site_715136
mod ID: M6ASITE074870 Click to Show/Hide the Full List
mod site chr6:36680530-36680531:+ [14]
Sequence CGAGCAGCGCCTTGCAGGAAACTGACTCATCACTACTCCCT
Motif Score 2.627720238
Cell/Tissue List HeLa; GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000615513.4; ENST00000405375.5; ENST00000244741.9; ENST00000459970.1; ENST00000462537.3; ENST00000373711.3; ENST00000448526.6; ENST00000478800.1
External Link RMBase: m6A_site_715137
mod ID: M6ASITE074871 Click to Show/Hide the Full List
mod site chr6:36684109-36684110:+ [14]
Sequence GCTGCAGGCGCCATGTCAGAACCGGCTGGGGATGTCCGTCA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MT4; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000615513.4; ENST00000459970.1; ENST00000448526.6; ENST00000405375.5; ENST00000373711.3; ENST00000244741.9; ENST00000478800.1
External Link RMBase: m6A_site_715138
mod ID: M6ASITE074872 Click to Show/Hide the Full List
mod site chr6:36684132-36684133:+ [14]
Sequence GGCTGGGGATGTCCGTCAGAACCCATGCGGCAGCAAGGCCT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MT4; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000373711.3; ENST00000478800.1; ENST00000459970.1; ENST00000615513.4; ENST00000448526.6; ENST00000405375.5; ENST00000244741.9
External Link RMBase: m6A_site_715139
mod ID: M6ASITE074873 Click to Show/Hide the Full List
mod site chr6:36684177-36684178:+ [14]
Sequence CCGCCTCTTCGGCCCAGTGGACAGCGAGCAGCTGAGCCGCG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; MT4; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; TIME; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000244741.9; ENST00000373711.3; ENST00000459970.1; ENST00000478800.1; ENST00000615513.4; ENST00000405375.5; ENST00000448526.6
External Link RMBase: m6A_site_715140
mod ID: M6ASITE074874 Click to Show/Hide the Full List
mod site chr6:36684249-36684250:+ [14]
Sequence GGAGGCCCGTGAGCGATGGAACTTCGACTTTGTCACCGAGA
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; MT4; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; TIME; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000244741.9; ENST00000615513.4; ENST00000405375.5; ENST00000459970.1; ENST00000478800.1; ENST00000448526.6; ENST00000373711.3
External Link RMBase: m6A_site_715141
mod ID: M6ASITE074875 Click to Show/Hide the Full List
mod site chr6:36684269-36684270:+ [14]
Sequence ACTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; MT4; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; TIME; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000478800.1; ENST00000448526.6; ENST00000615513.4; ENST00000459970.1; ENST00000405375.5; ENST00000373711.3; ENST00000244741.9
External Link RMBase: m6A_site_715142
mod ID: M6ASITE074876 Click to Show/Hide the Full List
mod site chr6:36684285-36684286:+ [15]
Sequence CGAGACACCACTGGAGGGTGACTTCGCCTGGGAGCGTGTGC
Motif Score 3.28175
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000615513.4; ENST00000478800.1; ENST00000373711.3; ENST00000459970.1; ENST00000448526.6; ENST00000405375.5; ENST00000244741.9
External Link RMBase: m6A_site_715143
mod ID: M6ASITE074877 Click to Show/Hide the Full List
mod site chr6:36684413-36684414:+ [14]
Sequence CACCTGCTCTGCTGCAGGGGACAGCAGAGGAAGACCATGTG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; H1A; H1B; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; TIME; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000405375.5; ENST00000373711.3; ENST00000615513.4; ENST00000459970.1; ENST00000448526.6; ENST00000244741.9; ENST00000478800.1
External Link RMBase: m6A_site_715144
mod ID: M6ASITE074878 Click to Show/Hide the Full List
mod site chr6:36684426-36684427:+ [14]
Sequence GCAGGGGACAGCAGAGGAAGACCATGTGGACCTGTCACTGT
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; H1A; H1B; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; TIME; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000448526.6; ENST00000405375.5; ENST00000478800.1; ENST00000244741.9; ENST00000615513.4; ENST00000373711.3; ENST00000459970.1
External Link RMBase: m6A_site_715145
mod ID: M6ASITE074879 Click to Show/Hide the Full List
mod site chr6:36684435-36684436:+ [14]
Sequence AGCAGAGGAAGACCATGTGGACCTGTCACTGTCTTGTACCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; H1A; H1B; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; TIME; endometrial; HEC-1-A; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000373711.3; ENST00000244741.9; ENST00000615513.4; ENST00000478800.1; ENST00000459970.1; ENST00000405375.5; ENST00000448526.6
External Link RMBase: m6A_site_715146
mod ID: M6ASITE074880 Click to Show/Hide the Full List
mod site chr6:36684499-36684500:+ [14]
Sequence GCTGAAGGGTCCCCAGGTGGACCTGGAGACTCTCAGGGTCG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; H1A; H1B; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; TIME; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000244741.9; ENST00000459970.1; ENST00000405375.5; ENST00000373711.3; ENST00000615513.4; ENST00000448526.6
External Link RMBase: m6A_site_715147
mod ID: M6ASITE074881 Click to Show/Hide the Full List
mod site chr6:36684507-36684508:+ [14]
Sequence GTCCCCAGGTGGACCTGGAGACTCTCAGGGTCGAAAACGGC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; H1A; H1B; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; TIME; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000615513.4; ENST00000448526.6; ENST00000405375.5; ENST00000459970.1; ENST00000373711.3; ENST00000244741.9
External Link RMBase: m6A_site_715148
mod ID: M6ASITE074882 Click to Show/Hide the Full List
mod site chr6:36684533-36684534:+ [14]
Sequence AGGGTCGAAAACGGCGGCAGACCAGCATGACAGGTGCGGAC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; H1A; A549; CD4T; peripheral-blood; GSC-11; HEK293T; TIME; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000405375.5; ENST00000448526.6; ENST00000244741.9; ENST00000373711.3; ENST00000615513.4
External Link RMBase: m6A_site_715149
mod ID: M6ASITE074883 Click to Show/Hide the Full List
mod site chr6:36685856-36685857:+ [16]
Sequence GGGCCTCAAAGGCCCGCTCTACATCTTCTGCCTTAGTCTCA
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000615513.4; ENST00000244741.9; ENST00000405375.5; ENST00000373711.3; ENST00000448526.6
External Link RMBase: m6A_site_715150
mod ID: M6ASITE074884 Click to Show/Hide the Full List
mod site chr6:36685915-36685916:+ [17]
Sequence TTATTTGTGTTTTAATTTAAACACCTCCTCATGTACATACC
Motif Score 2.20572619
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000405375.5; ENST00000448526.6; ENST00000615513.4; ENST00000373711.3; ENST00000244741.9
External Link RMBase: m6A_site_715151
mod ID: M6ASITE074885 Click to Show/Hide the Full List
mod site chr6:36685929-36685930:+ [17]
Sequence ATTTAAACACCTCCTCATGTACATACCCTGGCCGCCCCCTG
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000615513.4; ENST00000448526.6; ENST00000244741.9; ENST00000405375.5
External Link RMBase: m6A_site_715152
mod ID: M6ASITE074886 Click to Show/Hide the Full List
mod site chr6:36685981-36685982:+ [14]
Sequence CTGGCATTAGAATTATTTAAACAAAAACTAGGCGGTTGAAT
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T
Seq Type List m6A-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000244741.9; ENST00000405375.5; ENST00000615513.4; ENST00000448526.6
External Link RMBase: m6A_site_715153
mod ID: M6ASITE074887 Click to Show/Hide the Full List
mod site chr6:36685987-36685988:+ [14]
Sequence TTAGAATTATTTAAACAAAAACTAGGCGGTTGAATGAGAGG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000405375.5; ENST00000448526.6; ENST00000615513.4; ENST00000244741.9
External Link RMBase: m6A_site_715154
mod ID: M6ASITE074888 Click to Show/Hide the Full List
mod site chr6:36686044-36686045:+ [17]
Sequence GCATTTTTATTTTATGAAATACTATTTAAAGCCTCCTCATC
Motif Score 2.53247619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000448526.6; ENST00000244741.9; ENST00000405375.5; ENST00000615513.4
External Link RMBase: m6A_site_715155
mod ID: M6ASITE074889 Click to Show/Hide the Full List
mod site chr6:36686153-36686154:+ [17]
Sequence CCACTTGTCCGCTGGGTGGTACCCTCTGGAGGGGTGTGGCT
Motif Score 2.8355
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000615513.4; ENST00000244741.9; ENST00000405375.5; ENST00000448526.6
External Link RMBase: m6A_site_715156
mod ID: M6ASITE074890 Click to Show/Hide the Full List
mod site chr6:36686190-36686191:+ [17]
Sequence GGCTCCTTCCCATCGCTGTCACAGGCGGTTATGAAATTCAC
Motif Score 2.047297619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000244741.9; ENST00000615513.4; ENST00000448526.6; ENST00000405375.5
External Link RMBase: m6A_site_715157
mod ID: M6ASITE074891 Click to Show/Hide the Full List
mod site chr6:36686260-36686261:+ [17]
Sequence CTTTTTCATTTGAGAAGTAAACAGATGGCACTTTGAAGGGG
Motif Score 2.20572619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000244741.9; ENST00000615513.4; ENST00000405375.5; ENST00000448526.6
External Link RMBase: m6A_site_715158
mod ID: M6ASITE074892 Click to Show/Hide the Full List
mod site chr6:36686269-36686270:+ [17]
Sequence TTGAGAAGTAAACAGATGGCACTTTGAAGGGGCCTCACCGA
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000244741.9; ENST00000615513.4; ENST00000405375.5; ENST00000448526.6
External Link RMBase: m6A_site_715159
mod ID: M6ASITE074893 Click to Show/Hide the Full List
mod site chr6:36686308-36686309:+ [14]
Sequence GAGTGGGGGCATCATCAAAAACTTTGGAGTCCCCTCACCTC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000615513.4; ENST00000448526.6; ENST00000405375.5; ENST00000244741.9
External Link RMBase: m6A_site_715160
mod ID: M6ASITE074894 Click to Show/Hide the Full List
mod site chr6:36686385-36686386:+ [14]
Sequence AGCCTAGGGCTGAGCTGGGGACCTGGTACCCTCCTGGCTCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000448526.6; ENST00000405375.5; ENST00000244741.9; ENST00000615513.4
External Link RMBase: m6A_site_715161
mod ID: M6ASITE074895 Click to Show/Hide the Full List
mod site chr6:36686459-36686460:+ [14]
Sequence AAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGCCCTCATG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000405375.5; ENST00000244741.9; ENST00000615513.4; ENST00000448526.6
External Link RMBase: m6A_site_715162
mod ID: M6ASITE074896 Click to Show/Hide the Full List
mod site chr6:36686699-36686700:+ [18]
Sequence CCCCACCCCCAGCTCAATGGACTGGAAGGGGAAGGGACACA
Motif Score 4.065041667
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000405375.5; ENST00000615513.4; ENST00000448526.6; ENST00000244741.9
External Link RMBase: m6A_site_715163
mod ID: M6ASITE074897 Click to Show/Hide the Full List
mod site chr6:36686715-36686716:+ [18]
Sequence ATGGACTGGAAGGGGAAGGGACACACAAGAAGAAGGGCACC
Motif Score 3.643047619
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000244741.9; ENST00000615513.4; ENST00000405375.5; ENST00000448526.6
External Link RMBase: m6A_site_715164
mod ID: M6ASITE074898 Click to Show/Hide the Full List
mod site chr6:36686719-36686720:+ [16]
Sequence ACTGGAAGGGGAAGGGACACACAAGAAGAAGGGCACCCTAG
Motif Score 2.084928571
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000448526.6; ENST00000244741.9; ENST00000615513.4; ENST00000405375.5
External Link RMBase: m6A_site_715165
mod ID: M6ASITE074899 Click to Show/Hide the Full List
mod site chr6:36686885-36686886:+ [17]
Sequence TAGATCTTTCTAGGAGGGAGACACTGGCCCCTCAAATCGTC
Motif Score 2.897386905
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000405375.5; ENST00000244741.9; ENST00000448526.6; ENST00000615513.4
External Link RMBase: m6A_site_715166
mod ID: M6ASITE074900 Click to Show/Hide the Full List
mod site chr6:36686949-36686950:+ [17]
Sequence ATCCCTCCCCAGTTCATTGCACTTTGATTAGCAGCGGAACA
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000244741.9; ENST00000615513.4; ENST00000448526.6; ENST00000405375.5
External Link RMBase: m6A_site_715167
mod ID: M6ASITE074901 Click to Show/Hide the Full List
mod site chr6:36686967-36686968:+ [16]
Sequence GCACTTTGATTAGCAGCGGAACAAGGAGTCAGACATTTTAA
Motif Score 2.951386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000615513.4; ENST00000405375.5; ENST00000448526.6; ENST00000244741.9
External Link RMBase: m6A_site_715168
mod ID: M6ASITE074902 Click to Show/Hide the Full List
mod site chr6:36687132-36687133:+ [16]
Sequence GTATTGGGGTCTGACCCCAAACACCTTCCAGCTCCTGTAAC
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T; HeLa; peripheral-blood
Seq Type List MAZTER-seq; m6A-seq
Transcript ID List ENST00000405375.5; ENST00000244741.9; ENST00000448526.6; ENST00000615513.4
External Link RMBase: m6A_site_715169
mod ID: M6ASITE074903 Click to Show/Hide the Full List
mod site chr6:36687151-36687152:+ [16]
Sequence AACACCTTCCAGCTCCTGTAACATACTGGCCTGGACTGTTT
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000244741.9; ENST00000405375.5; ENST00000448526.6; ENST00000615513.4
External Link RMBase: m6A_site_715170
mod ID: M6ASITE074904 Click to Show/Hide the Full List
mod site chr6:36687165-36687166:+ [19]
Sequence CCTGTAACATACTGGCCTGGACTGTTTTCTCTCGGCTCCCC
Motif Score 4.065041667
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000615513.4; ENST00000405375.5; ENST00000448526.6; ENST00000244741.9
External Link RMBase: m6A_site_715171
mod ID: M6ASITE074905 Click to Show/Hide the Full List
mod site chr6:36687216-36687217:+ [19]
Sequence GTTCCCGTTTCTCCACCTAGACTGTAAACCTCTCGAGGGCA
Motif Score 3.319380952
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000244741.9; rmsk_1919675; ENST00000448526.6; ENST00000615513.4; ENST00000405375.5
External Link RMBase: m6A_site_715172
mod ID: M6ASITE074906 Click to Show/Hide the Full List
mod site chr6:36687223-36687224:+ [14]
Sequence TTTCTCCACCTAGACTGTAAACCTCTCGAGGGCAGGGACCA
Motif Score 2.185083333
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000448526.6; rmsk_1919675; ENST00000615513.4; ENST00000405375.5; ENST00000244741.9
External Link RMBase: m6A_site_715173
mod ID: M6ASITE074907 Click to Show/Hide the Full List
mod site chr6:36687240-36687241:+ [14]
Sequence TAAACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTG
Motif Score 3.622404762
Cell/Tissue List HeLa; peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000615513.4; ENST00000405375.5; ENST00000448526.6; ENST00000244741.9; rmsk_1919675
External Link RMBase: m6A_site_715174
mod ID: M6ASITE074908 Click to Show/Hide the Full List
mod site chr6:36687243-36687244:+ [16]
Sequence ACCTCTCGAGGGCAGGGACCACACCCTGTACTGTTCTGTGT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List rmsk_1919675; ENST00000405375.5; ENST00000615513.4; ENST00000244741.9; ENST00000448526.6
External Link RMBase: m6A_site_715175