m6A-centered Drug Response Information
General Information of the Drug (ID: M6ADRUG0066)
| Name |
R-2HG
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| Synonyms |
(R)-2-Hydroxypentanedioic acid; 13095-47-1; D-2-Hydroxyglutaric acid; (R)-2-hydroxyglutaric acid; (R)-Hydroxyglutarate; (R)-2-hydroxyglutarate; Pentanedioic acid, 2-hydroxy-, (2R)-; CHEMBL1614745; CHEBI:32796; D-2-Hydroxyglutarate; Glutaric acid, 2-hydroxy-; d-alpha-hydroxyglutaric acid; D-Hydroxyglutarate; 2HG; D-a-Hydroxyglutarate; 2-hydroxy-D-Glutarate; (R)-a-Hydroxyglutarate; delta-2-Hydroxyglutarate; D-a-Hydroxyglutaric acid; 2-hydroxy-delta-Glutarate; D-; A-Hydroxyglutaric acid; (2R)-hydroxyglutaric acid; 2-hydroxy-D-Glutaric acid; (R)-alpha-Hydroxyglutarate; delta-alpha-Hydroxyglutarate; SCHEMBL8032; (R)-a-Hydroxyglutaric acid; delta-2-Hydroxyglutaric acid; (R)-2-hydroxy-Pentanedioate; 2-hydroxy-delta-Glutaric acid; (R)-alpha-Hydroxyglutaric acid; delta-alpha-Hydroxyglutaric acid; (R)-2-hydroxy-Pentanedioic acid; DTXSID80897218; ZINC402968; BDBM50361471; AKOS027325193; FD21404; BS-50252; HY-113038; CS-0059411; C01087; 93397C3E-3CE9-4FEA-A2ED-8F6FA59A1FEA; Q27104222; Z2217110365; 636-67-9
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| Status | Investigative | [1] | |||
| Structure |
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| Formula |
C5H8O5
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| InChI |
InChI=1S/C5H8O5/c6-3(5(9)10)1-2-4(7)8/h3,6H,1-2H2,(H,7,8)(H,9,10)/t3-/m1/s1
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| InChIKey |
HWXBTNAVRSUOJR-GSVOUGTGSA-N
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| PubChem CID | |||||
Full List of m6A Targets Related to This Drug
Apoptosis regulator Bcl-2 (BCL2)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Drug Response by This Target Gene | [2] | |||
| Response Summary | Studies of the aberrant expression of m6A mediators in breast cancer revealed that they were associated with different BC subtypes and functions, such as proliferation, apoptosis, stemness, the cell cycle, migration, and metastasis, through several factors and signaling pathways, such as Apoptosis regulator Bcl-2 (BCL2) and the PI3K/Akt pathway, among others. Fat mass and obesity-associated protein (FTO) was identified as the first m6A demethylase, and a series of inhibitors that target FTO were reported to have potential for the treatment of BC by inhibiting cell proliferation and promoting apoptosis. | |||
| Responsed Disease | Breast cancer | ICD-11: 2C60 | ||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Pathway Response | Apoptosis | hsa04210 | ||
| PI3K-Akt signaling pathway | hsa04151 | |||
| Cell Process | Cell proliferation | |||
| Cell apoptosis | ||||
CCAAT/enhancer-binding protein alpha (CEBPA)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Drug Response by This Target Gene | [3] | |||
| Response Summary | This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. | |||
| Responsed Disease | Glioma | ICD-11: 2A00.0 | ||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Down regulation | |||
| Cell Process | Glutamine metabolism | |||
| Cell apoptosis | ||||
| In-vitro Model | 8-MG-BA | Glioblastoma | Homo sapiens | CVCL_1052 |
| A-172 | Glioblastoma | Homo sapiens | CVCL_0131 | |
| DK-MG | Glioblastoma | Homo sapiens | CVCL_1173 | |
| GaMG | Glioblastoma | Homo sapiens | CVCL_1226 | |
| HEL | Erythroleukemia | Homo sapiens | CVCL_0001 | |
| Jurkat | T acute lymphoblastic leukemia | Homo sapiens | CVCL_0065 | |
| KOCL-45 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3993 | |
| KOCL-48 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_6867 | |
| KOCL-50 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6866 | |
| KOCL-51 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6865 | |
| KOCL-69 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3995 | |
| KOPN-1 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3937 | |
| LN-18 | Glioblastoma | Homo sapiens | CVCL_0392 | |
| LN-229 | Glioblastoma | Homo sapiens | CVCL_0393 | |
| MA9.3 (MA9.3) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| MA9.6 (MLL-AF9) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| ME-1 [Human leukemia] | Adult acute myeloid leukemia | Homo sapiens | CVCL_2110 | |
| ML-2 | Adult acute myeloid leukemia | Homo sapiens | CVCL_1418 | |
| MV4-11 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0064 | |
| NB4 | Acute promyelocytic leukemia | Homo sapiens | CVCL_0005 | |
| NOMO-1 | Adult acute monocytic leukemia | Homo sapiens | CVCL_1609 | |
| PL21 | Familial adenomatous polyposis | Homo sapiens | CVCL_JM48 | |
| T98G | Glioblastoma | Homo sapiens | CVCL_0556 | |
| THP-1 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0006 | |
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| U-937 | Adult acute monocytic leukemia | Homo sapiens | CVCL_0007 | |
| In-vivo Model | For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation. | |||
| Experiment 2 Reporting the m6A-centered Drug Response by This Target Gene | [3] | |||
| Response Summary | This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. | |||
| Responsed Disease | Leukaemia | ICD-11: 2B33.4 | ||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Down regulation | |||
| Cell Process | Glutamine metabolism | |||
| Cell apoptosis | ||||
| In-vitro Model | 8-MG-BA | Glioblastoma | Homo sapiens | CVCL_1052 |
| A-172 | Glioblastoma | Homo sapiens | CVCL_0131 | |
| DK-MG | Glioblastoma | Homo sapiens | CVCL_1173 | |
| GaMG | Glioblastoma | Homo sapiens | CVCL_1226 | |
| HEL | Erythroleukemia | Homo sapiens | CVCL_0001 | |
| Jurkat | T acute lymphoblastic leukemia | Homo sapiens | CVCL_0065 | |
| KOCL-45 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3993 | |
| KOCL-48 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_6867 | |
| KOCL-50 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6866 | |
| KOCL-51 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6865 | |
| KOCL-69 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3995 | |
| KOPN-1 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3937 | |
| LN-18 | Glioblastoma | Homo sapiens | CVCL_0392 | |
| LN-229 | Glioblastoma | Homo sapiens | CVCL_0393 | |
| MA9.3 (MA9.3) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| MA9.6 (MLL-AF9) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| ME-1 [Human leukemia] | Adult acute myeloid leukemia | Homo sapiens | CVCL_2110 | |
| ML-2 | Adult acute myeloid leukemia | Homo sapiens | CVCL_1418 | |
| MV4-11 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0064 | |
| NB4 | Acute promyelocytic leukemia | Homo sapiens | CVCL_0005 | |
| NOMO-1 | Adult acute monocytic leukemia | Homo sapiens | CVCL_1609 | |
| PL21 | Familial adenomatous polyposis | Homo sapiens | CVCL_JM48 | |
| T98G | Glioblastoma | Homo sapiens | CVCL_0556 | |
| THP-1 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0006 | |
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| U-937 | Adult acute monocytic leukemia | Homo sapiens | CVCL_0007 | |
| In-vivo Model | For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation. | |||
Leukocyte immunoglobulin-like receptor subfamily B member 4 (LILRB4)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Drug Response by This Target Gene | [4] | |||
| Response Summary | Genetic depletion and pharmacological inhibition of FTO dramatically attenuate leukemia stem/initiating cell self-renewal and reprogram immune response by suppressing expression of immune checkpoint genes, especially Leukocyte immunoglobulin-like receptor subfamily B member 4 (LILRB4). FTO inhibitors, such as rhein, meclofenamic acid (MA), MO-I-500, fluorescein, and R-2HG, can inhibit acute myeloid leukemia cell viability. CS1 and CS2 displayed a much higher efficacy in inhibiting AML cell viability. | |||
| Responsed Disease | Acute myeloid leukaemia | ICD-11: 2A60 | ||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Down regulation | |||
| Pathway Response | B cell receptor signaling pathway | hsa04662 | ||
| Cell Process | Immune Evasion | |||
| In-vitro Model | MV4-11 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0064 |
| THP-1 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0006 | |
| U-937 | Adult acute monocytic leukemia | Homo sapiens | CVCL_0007 | |
| In-vivo Model | For each experiment, 6- to 8-week-old mice were used and randomly allocated to each group. For xenograft mouse, 0.1 × 106 MA9.3ITD cells were transplanted into NRGS recipient mice intravenously. Drug treatment was started from 10 days after transplantation. CS2 was administered through intraperitoneal (i.p.) injection at 5mg/kg/day, every other day. CS1 dissolved in saturated Beta-cyclodextrin (C0926, Sigma-Aldrich) solution was delivered by intravenous injection (i.v.). Successful engraftment was observed following 4 weeks post inoculation displaying a level of about 5% human CD33+ cells in peripheral. To generate PDX mouse models, 1 × 106 AML patient derived BMMNCs were transplanted into NRGS recipient mice intravenously, and drug treatment was started from 7 days later. CS2, FB23-2, and free CS1 were administered through i.p. injection at 5 mg/kg/day, while Micelle (900661, Sigma-Aldrich) packaged CS1 was delivered by i.v. injection at 5mg/kg/day. Both CS1 and CS2 were injected every other day for a total of ten times. | |||
Myc proto-oncogene protein (MYC)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Drug Response by This Target Gene | [3] | |||
| Response Summary | This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/Myc proto-oncogene protein (MYC)/CEBPA signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. | |||
| Responsed Disease | Glioma | ICD-11: 2A00.0 | ||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Down regulation | |||
| Cell Process | Glutamine metabolism | |||
| Cell apoptosis | ||||
| In-vitro Model | 8-MG-BA | Glioblastoma | Homo sapiens | CVCL_1052 |
| A-172 | Glioblastoma | Homo sapiens | CVCL_0131 | |
| DK-MG | Glioblastoma | Homo sapiens | CVCL_1173 | |
| GaMG | Glioblastoma | Homo sapiens | CVCL_1226 | |
| HEL | Erythroleukemia | Homo sapiens | CVCL_0001 | |
| Jurkat | T acute lymphoblastic leukemia | Homo sapiens | CVCL_0065 | |
| KOCL-45 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3993 | |
| KOCL-48 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_6867 | |
| KOCL-50 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6866 | |
| KOCL-51 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6865 | |
| KOCL-69 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3995 | |
| KOPN-1 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3937 | |
| LN-18 | Glioblastoma | Homo sapiens | CVCL_0392 | |
| LN-229 | Glioblastoma | Homo sapiens | CVCL_0393 | |
| MA9.3 (MA9.3) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| MA9.6 (MLL-AF9) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| ME-1 [Human leukemia] | Adult acute myeloid leukemia | Homo sapiens | CVCL_2110 | |
| ML-2 | Adult acute myeloid leukemia | Homo sapiens | CVCL_1418 | |
| MV4-11 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0064 | |
| NB4 | Acute promyelocytic leukemia | Homo sapiens | CVCL_0005 | |
| NOMO-1 | Adult acute monocytic leukemia | Homo sapiens | CVCL_1609 | |
| PL21 | Familial adenomatous polyposis | Homo sapiens | CVCL_JM48 | |
| T98G | Glioblastoma | Homo sapiens | CVCL_0556 | |
| THP-1 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0006 | |
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| U-937 | Adult acute monocytic leukemia | Homo sapiens | CVCL_0007 | |
| In-vivo Model | For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation. | |||
| Experiment 2 Reporting the m6A-centered Drug Response by This Target Gene | [3] | |||
| Response Summary | This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/Myc proto-oncogene protein (MYC)/CEBPA signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. | |||
| Responsed Disease | Leukaemia | ICD-11: 2B33.4 | ||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Down regulation | |||
| Cell Process | Glutamine metabolism | |||
| Cell apoptosis | ||||
| In-vitro Model | 8-MG-BA | Glioblastoma | Homo sapiens | CVCL_1052 |
| A-172 | Glioblastoma | Homo sapiens | CVCL_0131 | |
| DK-MG | Glioblastoma | Homo sapiens | CVCL_1173 | |
| GaMG | Glioblastoma | Homo sapiens | CVCL_1226 | |
| HEL | Erythroleukemia | Homo sapiens | CVCL_0001 | |
| Jurkat | T acute lymphoblastic leukemia | Homo sapiens | CVCL_0065 | |
| KOCL-45 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3993 | |
| KOCL-48 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_6867 | |
| KOCL-50 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6866 | |
| KOCL-51 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_6865 | |
| KOCL-69 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3995 | |
| KOPN-1 | B acute lymphoblastic leukemia | Homo sapiens | CVCL_3937 | |
| LN-18 | Glioblastoma | Homo sapiens | CVCL_0392 | |
| LN-229 | Glioblastoma | Homo sapiens | CVCL_0393 | |
| MA9.3 (MA9.3) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| MA9.6 (MLL-AF9) | ||||
| MA9.6ITD (MLL-AF9 plus FLT3-ITD) | ||||
| MA9.6RAS (MLL-AF9 plus NRasG12D) | ||||
| ME-1 [Human leukemia] | Adult acute myeloid leukemia | Homo sapiens | CVCL_2110 | |
| ML-2 | Adult acute myeloid leukemia | Homo sapiens | CVCL_1418 | |
| MV4-11 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0064 | |
| NB4 | Acute promyelocytic leukemia | Homo sapiens | CVCL_0005 | |
| NOMO-1 | Adult acute monocytic leukemia | Homo sapiens | CVCL_1609 | |
| PL21 | Familial adenomatous polyposis | Homo sapiens | CVCL_JM48 | |
| T98G | Glioblastoma | Homo sapiens | CVCL_0556 | |
| THP-1 | Childhood acute monocytic leukemia | Homo sapiens | CVCL_0006 | |
| U-87MG ATCC | Glioblastoma | Homo sapiens | CVCL_0022 | |
| U-937 | Adult acute monocytic leukemia | Homo sapiens | CVCL_0007 | |
| In-vivo Model | For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation. | |||
References
