General Information of the m6A Target Gene (ID: M6ATAR00215)
Target Name CCAAT/enhancer-binding protein alpha (CEBPA)
Synonyms
C/EBP alpha; CEBP
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Gene Name CEBPA
Chromosomal Location 19q13.11
Family bZIP family; C/EBP subfamily
Function
Transcription factor that coordinates proliferation arrest and the differentiation of myeloid progenitors, adipocytes, hepatocytes, and cells of the lung and the placenta. Binds directly to the consensus DNA sequence 5'-T[TG]NNGNAA[TG]-3' acting as an activator on distinct target genes. During early embryogenesis, plays essential and redundant functions with CEBPB. Essential for the transition from common myeloid progenitors (CMP) to granulocyte/monocyte progenitors (GMP). Critical for the proper development of the liver and the lung (By similarity). Necessary for terminal adipocyte differentiation, is required for postnatal maintenance of systemic energy homeostasis and lipid storage (By similarity). To regulate these different processes at the proper moment and tissue, interplays with other transcription factors and modulators. Down-regulates the expression of genes that maintain cells in an undifferentiated and proliferative state through E2F1 repression, which is critical for its ability to induce adipocyte and granulocyte terminal differentiation. Reciprocally E2F1 blocks adipocyte differentiation by binding to specific promoters and repressing CEBPA binding to its target gene promoters. Proliferation arrest also depends on a functional binding to SWI/SNF complex. In liver, regulates gluconeogenesis and lipogenesis through different mechanisms. To regulate gluconeogenesis, functionally cooperates with FOXO1 binding to IRE-controlled promoters and regulating the expression of target genes such as PCK1 or G6PC1. To modulate lipogenesis, interacts and transcriptionally synergizes with SREBF1 in promoter activation of specific lipogenic target genes such as ACAS2. In adipose tissue, seems to act as FOXO1 coactivator accessing to ADIPOQ promoter through FOXO1 binding sites (By similarity). [Isoform 3]: Can act as dominant-negative. Binds DNA and have transctivation activity, even if much less efficiently than isoform 2. Does not inhibit cell proliferation . [Isoform 4]: Directly and specifically enhances ribosomal DNA transcription interacting with RNA polymerase I-specific cofactors and inducing histone acetylation.
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Gene ID 1050
Uniprot ID
CEBPA_HUMAN
HGNC ID
HGNC:1833
KEGG ID
hsa:1050
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
CEBPA can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Browse Drug
Fat mass and obesity-associated protein (FTO) [ERASER]
Representative RNA-seq result indicating the expression of this target gene regulated by FTO
Cell Line NB4 cell line Homo sapiens
Treatment: shFTO NB4 cells
Control: shNS NB4 cells
GSE103494
Regulation
logFC: 6.07E-01
p-value: 3.92E-03
More Results Click to View More RNA-seq Results
In total 2 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling.
Target Regulation Down regulation
Responsed Disease Glioma ICD-11: 2A00.0
Responsed Drug R-2HG Investigative
Cell Process Glutamine metabolism
Cell apoptosis
In-vitro Model 8-MG-BA Glioblastoma Homo sapiens CVCL_1052
A-172 Glioblastoma Homo sapiens CVCL_0131
DK-MG Glioblastoma Homo sapiens CVCL_1173
GaMG Glioblastoma Homo sapiens CVCL_1226
HEL Erythroleukemia Homo sapiens CVCL_0001
Jurkat T acute lymphoblastic leukemia Homo sapiens CVCL_0065
KOCL-45 B acute lymphoblastic leukemia Homo sapiens CVCL_3993
KOCL-48 Childhood acute monocytic leukemia Homo sapiens CVCL_6867
KOCL-50 B acute lymphoblastic leukemia Homo sapiens CVCL_6866
KOCL-51 B acute lymphoblastic leukemia Homo sapiens CVCL_6865
KOCL-69 B acute lymphoblastic leukemia Homo sapiens CVCL_3995
KOPN-1 B acute lymphoblastic leukemia Homo sapiens CVCL_3937
LN-18 Glioblastoma Homo sapiens CVCL_0392
LN-229 Glioblastoma Homo sapiens CVCL_0393
MA9.3 (MA9.3)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
MA9.6 (MLL-AF9)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
ME-1 [Human leukemia] Adult acute myeloid leukemia Homo sapiens CVCL_2110
ML-2 Adult acute myeloid leukemia Homo sapiens CVCL_1418
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
NOMO-1 Adult acute monocytic leukemia Homo sapiens CVCL_1609
PL21 Familial adenomatous polyposis Homo sapiens CVCL_JM48
T98G Glioblastoma Homo sapiens CVCL_0556
THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
U-87MG ATCC Glioblastoma Homo sapiens CVCL_0022
U-937 Adult acute monocytic leukemia Homo sapiens CVCL_0007
In-vivo Model For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation.
Experiment 2 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling.
Target Regulation Down regulation
Responsed Disease Leukaemia ICD-11: 2B33.4
Responsed Drug R-2HG Investigative
Cell Process Glutamine metabolism
Cell apoptosis
In-vitro Model 8-MG-BA Glioblastoma Homo sapiens CVCL_1052
A-172 Glioblastoma Homo sapiens CVCL_0131
DK-MG Glioblastoma Homo sapiens CVCL_1173
GaMG Glioblastoma Homo sapiens CVCL_1226
HEL Erythroleukemia Homo sapiens CVCL_0001
Jurkat T acute lymphoblastic leukemia Homo sapiens CVCL_0065
KOCL-45 B acute lymphoblastic leukemia Homo sapiens CVCL_3993
KOCL-48 Childhood acute monocytic leukemia Homo sapiens CVCL_6867
KOCL-50 B acute lymphoblastic leukemia Homo sapiens CVCL_6866
KOCL-51 B acute lymphoblastic leukemia Homo sapiens CVCL_6865
KOCL-69 B acute lymphoblastic leukemia Homo sapiens CVCL_3995
KOPN-1 B acute lymphoblastic leukemia Homo sapiens CVCL_3937
LN-18 Glioblastoma Homo sapiens CVCL_0392
LN-229 Glioblastoma Homo sapiens CVCL_0393
MA9.3 (MA9.3)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
MA9.6 (MLL-AF9)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
ME-1 [Human leukemia] Adult acute myeloid leukemia Homo sapiens CVCL_2110
ML-2 Adult acute myeloid leukemia Homo sapiens CVCL_1418
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
NOMO-1 Adult acute monocytic leukemia Homo sapiens CVCL_1609
PL21 Familial adenomatous polyposis Homo sapiens CVCL_JM48
T98G Glioblastoma Homo sapiens CVCL_0556
THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
U-87MG ATCC Glioblastoma Homo sapiens CVCL_0022
U-937 Adult acute monocytic leukemia Homo sapiens CVCL_0007
In-vivo Model For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation.
Brain cancer [ICD-11: 2A00]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling.
Responsed Disease Glioma [ICD-11: 2A00.0]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Target Regulation Down regulation
Responsed Drug R-2HG Investigative
Cell Process Glutamine metabolism
Cell apoptosis
In-vitro Model 8-MG-BA Glioblastoma Homo sapiens CVCL_1052
A-172 Glioblastoma Homo sapiens CVCL_0131
DK-MG Glioblastoma Homo sapiens CVCL_1173
GaMG Glioblastoma Homo sapiens CVCL_1226
HEL Erythroleukemia Homo sapiens CVCL_0001
Jurkat T acute lymphoblastic leukemia Homo sapiens CVCL_0065
KOCL-45 B acute lymphoblastic leukemia Homo sapiens CVCL_3993
KOCL-48 Childhood acute monocytic leukemia Homo sapiens CVCL_6867
KOCL-50 B acute lymphoblastic leukemia Homo sapiens CVCL_6866
KOCL-51 B acute lymphoblastic leukemia Homo sapiens CVCL_6865
KOCL-69 B acute lymphoblastic leukemia Homo sapiens CVCL_3995
KOPN-1 B acute lymphoblastic leukemia Homo sapiens CVCL_3937
LN-18 Glioblastoma Homo sapiens CVCL_0392
LN-229 Glioblastoma Homo sapiens CVCL_0393
MA9.3 (MA9.3)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
MA9.6 (MLL-AF9)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
ME-1 [Human leukemia] Adult acute myeloid leukemia Homo sapiens CVCL_2110
ML-2 Adult acute myeloid leukemia Homo sapiens CVCL_1418
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
NOMO-1 Adult acute monocytic leukemia Homo sapiens CVCL_1609
PL21 Familial adenomatous polyposis Homo sapiens CVCL_JM48
T98G Glioblastoma Homo sapiens CVCL_0556
THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
U-87MG ATCC Glioblastoma Homo sapiens CVCL_0022
U-937 Adult acute monocytic leukemia Homo sapiens CVCL_0007
In-vivo Model For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation.
Malignant haematopoietic neoplasm [ICD-11: 2B33]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling.
Responsed Disease Leukaemia [ICD-11: 2B33.4]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Target Regulation Down regulation
Responsed Drug R-2HG Investigative
Cell Process Glutamine metabolism
Cell apoptosis
In-vitro Model 8-MG-BA Glioblastoma Homo sapiens CVCL_1052
A-172 Glioblastoma Homo sapiens CVCL_0131
DK-MG Glioblastoma Homo sapiens CVCL_1173
GaMG Glioblastoma Homo sapiens CVCL_1226
HEL Erythroleukemia Homo sapiens CVCL_0001
Jurkat T acute lymphoblastic leukemia Homo sapiens CVCL_0065
KOCL-45 B acute lymphoblastic leukemia Homo sapiens CVCL_3993
KOCL-48 Childhood acute monocytic leukemia Homo sapiens CVCL_6867
KOCL-50 B acute lymphoblastic leukemia Homo sapiens CVCL_6866
KOCL-51 B acute lymphoblastic leukemia Homo sapiens CVCL_6865
KOCL-69 B acute lymphoblastic leukemia Homo sapiens CVCL_3995
KOPN-1 B acute lymphoblastic leukemia Homo sapiens CVCL_3937
LN-18 Glioblastoma Homo sapiens CVCL_0392
LN-229 Glioblastoma Homo sapiens CVCL_0393
MA9.3 (MA9.3)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
MA9.6 (MLL-AF9)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
ME-1 [Human leukemia] Adult acute myeloid leukemia Homo sapiens CVCL_2110
ML-2 Adult acute myeloid leukemia Homo sapiens CVCL_1418
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
NOMO-1 Adult acute monocytic leukemia Homo sapiens CVCL_1609
PL21 Familial adenomatous polyposis Homo sapiens CVCL_JM48
T98G Glioblastoma Homo sapiens CVCL_0556
THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
U-87MG ATCC Glioblastoma Homo sapiens CVCL_0022
U-937 Adult acute monocytic leukemia Homo sapiens CVCL_0007
In-vivo Model For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation.
R-2HG [Investigative]
In total 2 item(s) under this drug
Experiment 1 Reporting the m6A-centered Drug Response [1]
Response Summary This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling.
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Target Regulation Down regulation
Responsed Disease Glioma ICD-11: 2A00.0
Cell Process Glutamine metabolism
Cell apoptosis
In-vitro Model 8-MG-BA Glioblastoma Homo sapiens CVCL_1052
A-172 Glioblastoma Homo sapiens CVCL_0131
DK-MG Glioblastoma Homo sapiens CVCL_1173
GaMG Glioblastoma Homo sapiens CVCL_1226
HEL Erythroleukemia Homo sapiens CVCL_0001
Jurkat T acute lymphoblastic leukemia Homo sapiens CVCL_0065
KOCL-45 B acute lymphoblastic leukemia Homo sapiens CVCL_3993
KOCL-48 Childhood acute monocytic leukemia Homo sapiens CVCL_6867
KOCL-50 B acute lymphoblastic leukemia Homo sapiens CVCL_6866
KOCL-51 B acute lymphoblastic leukemia Homo sapiens CVCL_6865
KOCL-69 B acute lymphoblastic leukemia Homo sapiens CVCL_3995
KOPN-1 B acute lymphoblastic leukemia Homo sapiens CVCL_3937
LN-18 Glioblastoma Homo sapiens CVCL_0392
LN-229 Glioblastoma Homo sapiens CVCL_0393
MA9.3 (MA9.3)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
MA9.6 (MLL-AF9)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
ME-1 [Human leukemia] Adult acute myeloid leukemia Homo sapiens CVCL_2110
ML-2 Adult acute myeloid leukemia Homo sapiens CVCL_1418
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
NOMO-1 Adult acute monocytic leukemia Homo sapiens CVCL_1609
PL21 Familial adenomatous polyposis Homo sapiens CVCL_JM48
T98G Glioblastoma Homo sapiens CVCL_0556
THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
U-87MG ATCC Glioblastoma Homo sapiens CVCL_0022
U-937 Adult acute monocytic leukemia Homo sapiens CVCL_0007
In-vivo Model For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation.
Experiment 2 Reporting the m6A-centered Drug Response [1]
Response Summary This work demonstrates anti-tumor effects of 2HG in inhibiting proliferation/survival of FTO-high cancer cells via targeting FTO/m6A/MYC/CCAAT/enhancer-binding protein alpha (CEBPA) signaling.High levels of FTO sensitize leukemia cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling. R-2HG also displays anti-tumor activity in glioma. High levels of FTO sensitize leukemic cells to R-2HG, whereas hyperactivation of MYC signaling confers resistance that can be reversed by the inhibition of MYC signaling.
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Target Regulation Down regulation
Responsed Disease Leukaemia ICD-11: 2B33.4
Cell Process Glutamine metabolism
Cell apoptosis
In-vitro Model 8-MG-BA Glioblastoma Homo sapiens CVCL_1052
A-172 Glioblastoma Homo sapiens CVCL_0131
DK-MG Glioblastoma Homo sapiens CVCL_1173
GaMG Glioblastoma Homo sapiens CVCL_1226
HEL Erythroleukemia Homo sapiens CVCL_0001
Jurkat T acute lymphoblastic leukemia Homo sapiens CVCL_0065
KOCL-45 B acute lymphoblastic leukemia Homo sapiens CVCL_3993
KOCL-48 Childhood acute monocytic leukemia Homo sapiens CVCL_6867
KOCL-50 B acute lymphoblastic leukemia Homo sapiens CVCL_6866
KOCL-51 B acute lymphoblastic leukemia Homo sapiens CVCL_6865
KOCL-69 B acute lymphoblastic leukemia Homo sapiens CVCL_3995
KOPN-1 B acute lymphoblastic leukemia Homo sapiens CVCL_3937
LN-18 Glioblastoma Homo sapiens CVCL_0392
LN-229 Glioblastoma Homo sapiens CVCL_0393
MA9.3 (MA9.3)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
MA9.6 (MLL-AF9)
MA9.6ITD (MLL-AF9 plus FLT3-ITD)
MA9.6RAS (MLL-AF9 plus NRasG12D)
ME-1 [Human leukemia] Adult acute myeloid leukemia Homo sapiens CVCL_2110
ML-2 Adult acute myeloid leukemia Homo sapiens CVCL_1418
MV4-11 Childhood acute monocytic leukemia Homo sapiens CVCL_0064
NB4 Acute promyelocytic leukemia Homo sapiens CVCL_0005
NOMO-1 Adult acute monocytic leukemia Homo sapiens CVCL_1609
PL21 Familial adenomatous polyposis Homo sapiens CVCL_JM48
T98G Glioblastoma Homo sapiens CVCL_0556
THP-1 Childhood acute monocytic leukemia Homo sapiens CVCL_0006
U-87MG ATCC Glioblastoma Homo sapiens CVCL_0022
U-937 Adult acute monocytic leukemia Homo sapiens CVCL_0007
In-vivo Model For R-2HG injection mouse models, sensitive (NOMO-1 and MA9.3ITD) or resistant (MA9.3RAS) cells were injected into NSGS or NRGS intravenously, and then R-2HG (6mg/kg body weight) or PBS were injected once daily through tail vein for 12 consecutive days starting from day 11 post xeno-transplantation.
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00215)
CCAAT/enhancer-binding protein alpha (CEBPA)
N1-methyladenosine (m1A)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M1ASITE000068 Click to Show/Hide the Full List
mod site chr19:33302533-33302534:- [2]
Sequence GGGCCGGCGCGGGCCGGGCCATTCGCGACCCGGAGGTGCGC
Cell/Tissue List HEK293T
Seq Type List m1A-MAP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m1A_site_547
5-methylcytidine (m5C)
In total 15 m6A sequence/site(s) in this target gene
mod ID: M5CSITE001889 Click to Show/Hide the Full List
mod site chr19:33301598-33301599:-
Sequence AGTGGCGGCAGCGGCGCGGGCAAGGCCAAGAAGTCGGTGGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23911
mod ID: M5CSITE001890 Click to Show/Hide the Full List
mod site chr19:33301602-33301603:-
Sequence CGCGAGTGGCGGCAGCGGCGCGGGCAAGGCCAAGAAGTCGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23912
mod ID: M5CSITE001891 Click to Show/Hide the Full List
mod site chr19:33301604-33301605:-
Sequence CGCGCGAGTGGCGGCAGCGGCGCGGGCAAGGCCAAGAAGTC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23913
mod ID: M5CSITE001892 Click to Show/Hide the Full List
mod site chr19:33301607-33301608:-
Sequence CTCCGCGCGAGTGGCGGCAGCGGCGCGGGCAAGGCCAAGAA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23914
mod ID: M5CSITE001893 Click to Show/Hide the Full List
mod site chr19:33301610-33301611:-
Sequence GACCTCCGCGCGAGTGGCGGCAGCGGCGCGGGCAAGGCCAA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23915
mod ID: M5CSITE001894 Click to Show/Hide the Full List
mod site chr19:33301613-33301614:-
Sequence CCCGACCTCCGCGCGAGTGGCGGCAGCGGCGCGGGCAAGGC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23916
mod ID: M5CSITE001895 Click to Show/Hide the Full List
mod site chr19:33301682-33301683:-
Sequence GCGCCCGCGCTCGGTGCCGCCGGCCTGCCGGGCCCTGGCAG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23917
mod ID: M5CSITE001896 Click to Show/Hide the Full List
mod site chr19:33301683-33301684:-
Sequence CGCGCCCGCGCTCGGTGCCGCCGGCCTGCCGGGCCCTGGCA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23918
mod ID: M5CSITE001897 Click to Show/Hide the Full List
mod site chr19:33301685-33301686:-
Sequence CCCGCGCCCGCGCTCGGTGCCGCCGGCCTGCCGGGCCCTGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23919
mod ID: M5CSITE001898 Click to Show/Hide the Full List
mod site chr19:33302102-33302103:- [3]
Sequence ACGGGCGGCGGCGGCGGCGGCGACTTTGACTACCCGGGCGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23920
mod ID: M5CSITE001899 Click to Show/Hide the Full List
mod site chr19:33302105-33302106:- [3]
Sequence CCCACGGGCGGCGGCGGCGGCGGCGACTTTGACTACCCGGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23921
mod ID: M5CSITE001900 Click to Show/Hide the Full List
mod site chr19:33302108-33302109:- [3]
Sequence GGCCCCACGGGCGGCGGCGGCGGCGGCGACTTTGACTACCC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23922
mod ID: M5CSITE001901 Click to Show/Hide the Full List
mod site chr19:33302111-33302112:- [3]
Sequence GTGGGCCCCACGGGCGGCGGCGGCGGCGGCGACTTTGACTA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23923
mod ID: M5CSITE001902 Click to Show/Hide the Full List
mod site chr19:33302114-33302115:- [3]
Sequence GCCGTGGGCCCCACGGGCGGCGGCGGCGGCGGCGACTTTGA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23924
mod ID: M5CSITE001903 Click to Show/Hide the Full List
mod site chr19:33302117-33302118:- [3]
Sequence GCGGCCGTGGGCCCCACGGGCGGCGGCGGCGGCGGCGACTT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m5C_site_23925
N6-methyladenosine (m6A)
In total 36 m6A sequence/site(s) in this target gene
mod ID: M6ASITE040796 Click to Show/Hide the Full List
mod site chr19:33300180-33300181:- [4]
Sequence ATTACTTTTGATCCTGGGGGACCAATGAGGTGAGGGGGGTT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433387
mod ID: M6ASITE040797 Click to Show/Hide the Full List
mod site chr19:33300224-33300225:- [4]
Sequence AGCTGGGGGAAGGGTCTGAGACTCCCTTTCCTTTTGGTTTT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433389
mod ID: M6ASITE040798 Click to Show/Hide the Full List
mod site chr19:33300257-33300258:- [4]
Sequence CGGATACTTGCCAAAATGAGACTCTCCGTCGGCAGCTGGGG
Motif Score 3.319380952
Cell/Tissue List HeLa; AML
Seq Type List m6A-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433391
mod ID: M6ASITE040799 Click to Show/Hide the Full List
mod site chr19:33300272-33300273:- [5]
Sequence TGTTTTGGTTTTGCTCGGATACTTGCCAAAATGAGACTCTC
Motif Score 2.53247619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433392
mod ID: M6ASITE040800 Click to Show/Hide the Full List
mod site chr19:33300385-33300386:- [6]
Sequence TGCTTTATCAGCCGATATCAACACTTGTATCTGGCCTCTGT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433393
mod ID: M6ASITE040801 Click to Show/Hide the Full List
mod site chr19:33300424-33300425:- [5]
Sequence CCAGAGGGACCGGAGTTATGACAAGCTTTCCAAATATTTTG
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433394
mod ID: M6ASITE040802 Click to Show/Hide the Full List
mod site chr19:33300436-33300437:- [4]
Sequence GATCAGTCCATCCCAGAGGGACCGGAGTTATGACAAGCTTT
Motif Score 3.622404762
Cell/Tissue List HeLa; A549; HEK293A-TOA; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433395
mod ID: M6ASITE040803 Click to Show/Hide the Full List
mod site chr19:33300467-33300468:- [4]
Sequence GCCTTCAGCATTGCCTAGGAACACGAAGCACGATCAGTCCA
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; A549; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433397
mod ID: M6ASITE040804 Click to Show/Hide the Full List
mod site chr19:33300512-33300513:- [4]
Sequence GGGGGTGAAGGGCCACTGGGACCCTCAGCCTTGTTTGTACT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; Huh7; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433398
mod ID: M6ASITE040805 Click to Show/Hide the Full List
mod site chr19:33300562-33300563:- [4]
Sequence ACCCCTGGTGGGAGAGGGAGACCTAGAGATCTGGCTGTGGG
Motif Score 2.876744048
Cell/Tissue List HeLa; Huh7; peripheral-blood
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433399
mod ID: M6ASITE040806 Click to Show/Hide the Full List
mod site chr19:33300676-33300677:- [7]
Sequence GGGCTTCCCCTTGGGGCGGAACTCACTGCGATGGGGGTCAC
Motif Score 3.373380952
Cell/Tissue List Huh7; peripheral-blood; AML
Seq Type List MeRIP-seq; m6A-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433400
mod ID: M6ASITE040807 Click to Show/Hide the Full List
mod site chr19:33300725-33300726:- [6]
Sequence CCTCTCCCACCTCCCTCCGCACACACCCCACCCCAGCCTGC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433401
mod ID: M6ASITE040808 Click to Show/Hide the Full List
mod site chr19:33300775-33300776:- [6]
Sequence AAGGTTGTTCCCCTAGTTCTACATGAAGGTGGAGGGTCTCT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433402
mod ID: M6ASITE040809 Click to Show/Hide the Full List
mod site chr19:33300799-33300800:- [8]
Sequence ATAGGGACTTGGGGCTTGGAACCTAAGGTTGTTCCCCTAGT
Motif Score 2.930744048
Cell/Tissue List HepG2; HeLa; MM6; Huh7; peripheral-blood; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433403
mod ID: M6ASITE040810 Click to Show/Hide the Full List
mod site chr19:33300813-33300814:- [8]
Sequence AAAGGGGTGGAAACATAGGGACTTGGGGCTTGGAACCTAAG
Motif Score 4.065041667
Cell/Tissue List HepG2; HeLa; MM6; Huh7; peripheral-blood; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433404
mod ID: M6ASITE040811 Click to Show/Hide the Full List
mod site chr19:33300821-33300822:- [9]
Sequence GTCCTTAGAAAGGGGTGGAAACATAGGGACTTGGGGCTTGG
Motif Score 2.20572619
Cell/Tissue List HepG2; hESC-HEK293T; HeLa; MM6; Huh7; peripheral-blood
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433405
mod ID: M6ASITE040812 Click to Show/Hide the Full List
mod site chr19:33300876-33300877:- [5]
Sequence CTCAGGGAGCTGAGATCCCGACAAGCCCGCCAGCCCCAGCC
Motif Score 2.865571429
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433406
mod ID: M6ASITE040813 Click to Show/Hide the Full List
mod site chr19:33300942-33300943:- [4]
Sequence CCTTCCCGAGGCTACAGCAGACCCCCATGAGAGAAGGAGGG
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; A549; MM6; Huh7; HEK293T; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433407
mod ID: M6ASITE040814 Click to Show/Hide the Full List
mod site chr19:33301036-33301037:- [4]
Sequence CTTGTGCCTTGGAAATGCAAACTCACCGCTCCAATGCCTAC
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1B; MM6; Huh7; peripheral-blood; HEK293A-TOA; iSLK; TREX; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433408
mod ID: M6ASITE040815 Click to Show/Hide the Full List
mod site chr19:33301164-33301165:- [4]
Sequence CCTCCCTTCCTCTGCGCCGGACTTGGTGCGTCTAAGATGAG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433409
mod ID: M6ASITE040816 Click to Show/Hide the Full List
mod site chr19:33301233-33301234:- [4]
Sequence CCCGAGCCGTGCGAGCCAGGACTAGGAGATTCCGGTGCCTC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433410
mod ID: M6ASITE040817 Click to Show/Hide the Full List
mod site chr19:33301293-33301294:- [4]
Sequence TGGGCCAGCCTCCGGCGGGGACCCAGGGAGTGGTTTGGGGT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433412
mod ID: M6ASITE040818 Click to Show/Hide the Full List
mod site chr19:33301320-33301321:- [4]
Sequence GTGAGGCGCGCGGCTGTGGGACCGCCCTGGGCCAGCCTCCG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433413
mod ID: M6ASITE040819 Click to Show/Hide the Full List
mod site chr19:33301407-33301408:- [4]
Sequence ACAGCTGAGCCGCGAACTGGACACGCTGCGGGGCATCTTCC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; liver; A549; hESC-HEK293T; H1A; H1B; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433414
mod ID: M6ASITE040820 Click to Show/Hide the Full List
mod site chr19:33301412-33301413:- [4]
Sequence GTGGAACAGCTGAGCCGCGAACTGGACACGCTGCGGGGCAT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; fibroblasts; MT4; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433415
mod ID: M6ASITE040821 Click to Show/Hide the Full List
mod site chr19:33301427-33301428:- [4]
Sequence CGCCTGCGCAAGCGGGTGGAACAGCTGAGCCGCGAACTGGA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; H1A; H1B; hESCs; fibroblasts; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433416
mod ID: M6ASITE040822 Click to Show/Hide the Full List
mod site chr19:33301449-33301450:- [10]
Sequence GGAGCTGACCAGTGACAATGACCGCCTGCGCAAGCGGGTGG
Motif Score 2.839113095
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433417
mod ID: M6ASITE040823 Click to Show/Hide the Full List
mod site chr19:33301455-33301456:- [11]
Sequence GGTGCTGGAGCTGACCAGTGACAATGACCGCCTGCGCAAGC
Motif Score 2.859755952
Cell/Tissue List liver; hESC-HEK293T; A549; AML
Seq Type List m6A-REF-seq; MAZTER-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433418
mod ID: M6ASITE040824 Click to Show/Hide the Full List
mod site chr19:33301462-33301463:- [10]
Sequence AGCAGAAGGTGCTGGAGCTGACCAGTGACAATGACCGCCTG
Motif Score 2.839113095
Cell/Tissue List CD8T; A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433419
mod ID: M6ASITE040825 Click to Show/Hide the Full List
mod site chr19:33301486-33301487:- [10]
Sequence CCAAGCAGCGCAACGTGGAGACGCAGCAGAAGGTGCTGGAG
Motif Score 2.871321429
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433420
mod ID: M6ASITE040826 Click to Show/Hide the Full List
mod site chr19:33301494-33301495:- [10]
Sequence CGACAAGGCCAAGCAGCGCAACGTGGAGACGCAGCAGAAGG
Motif Score 2.147845238
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433421
mod ID: M6ASITE040827 Click to Show/Hide the Full List
mod site chr19:33301512-33301513:- [6]
Sequence CGCGGTGCGCAAGAGCCGCGACAAGGCCAAGCAGCGCAACG
Motif Score 2.865571429
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433422
mod ID: M6ASITE040828 Click to Show/Hide the Full List
mod site chr19:33301572-33301573:- [4]
Sequence CAAGAAGTCGGTGGACAAGAACAGCAACGAGTACCGGGTGC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; H1A; H1B; hESCs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433423
mod ID: M6ASITE040829 Click to Show/Hide the Full List
mod site chr19:33301578-33301579:- [4]
Sequence CAAGGCCAAGAAGTCGGTGGACAAGAACAGCAACGAGTACC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; A549; hESC-HEK293T; H1A; hESCs; MT4; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TREX; endometrial; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433424
mod ID: M6ASITE040830 Click to Show/Hide the Full List
mod site chr19:33301768-33301769:- [4]
Sequence AGATCGCGCACTGCGGCCAGACCACCATGCACCTGCAGCCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; A549; MT4; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433425
mod ID: M6ASITE040831 Click to Show/Hide the Full List
mod site chr19:33302427-33302428:- [4]
Sequence AGGCTCGCCATGCCGGGAGAACTCTAACTCCCCCATGGAGT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; A549; MM6; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000498907.3
External Link RMBase: m6A_site_433426