m6A-centered Disease Response Information
General Information of the Disease (ID: M6ADIS0138)
| Name |
Diseases of the musculoskeletal system
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|---|---|---|---|---|---|
| ICD |
ICD-11: FC0Z
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Full List of Target Gene(s) of This m6A-centered Disease Response
Endoplasmic reticulum chaperone BiP (Grp78)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
| Response Summary | METTL3 knockdown enhanced Endoplasmic reticulum chaperone BiP (Grp78) expression through YTHDF2-mediated RNA degradation, which elicited ER stress, thereby promoting osteoblast apoptosis and inhibiting cell proliferation and differentiation under LPS-induced inflammatory condition. | |||
| Responsed Disease | Diseases of the musculoskeletal system [ICD-11: FC0Z] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Down regulation | |||
| Pathway Response | RNA degradation | hsa03018 | ||
| Cell Process | RNA stability | |||
| In-vitro Model | MC3T3-E1 | Normal | Mus musculus | CVCL_0409 |
| Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [1] | |||
| Response Summary | METTL3 knockdown enhanced Endoplasmic reticulum chaperone BiP (Grp78) expression through YTHDF2-mediated RNA degradation, which elicited ER stress, thereby promoting osteoblast apoptosis and inhibiting cell proliferation and differentiation under LPS-induced inflammatory condition. | |||
| Responsed Disease | Diseases of the musculoskeletal system [ICD-11: FC0Z] | |||
| Target Regulator | YTH domain-containing family protein 2 (YTHDF2) | READER | ||
| Target Regulation | Down regulation | |||
| Pathway Response | RNA degradation | hsa03018 | ||
| Cell Process | RNA stability | |||
| In-vitro Model | MC3T3-E1 | Normal | Mus musculus | CVCL_0409 |
Runt-related transcription factor 2 (Runx2)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [2] | |||
| Response Summary | ALKBH5 promotes osteogenesis through modulating Runt-related transcription factor 2 (Runx2) mRNA stability. | |||
| Responsed Disease | Diseases of the musculoskeletal system [ICD-11: FC0Z] | |||
| Target Regulator | RNA demethylase ALKBH5 (ALKBH5) | ERASER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | mRNA surveillance pathway | hsa03015 | ||
| RNA degradation | hsa03018 | |||
| Cell Process | RNA stability | |||
Vascular endothelial growth factor A (VEGFA)
| In total 1 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [3] | |||
| Response Summary | Mettl3 knockdown not only reduced the expression of Vascular endothelial growth factor A (VEGFA) but also decreased the level of its splice variants, vegfa-164 and vegfa-188, in Mettl3-deficient BMSCs. These findings contribute to novel progress in understanding the role of epitranscriptomic regulation in the osteogenic differentiation of BMSCs. | |||
| Responsed Disease | Diseases of the musculoskeletal system [ICD-11: FC0Z] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | PI3K-Akt signaling pathway | hsa04151 | ||
| Cell Process | Alternative splicing | |||
| In-vitro Model | BMSCs (BMSCs were obtained from the femurs and tibias of 2-3-week-old Sprague-Dawley male rats (Animal Center of Sun Yat-sen University)) | |||
hsa_circ_0008542 (Circ_PHF12)
| In total 2 item(s) under this target gene | ||||
| Experiment 1 Reporting the m6A-centered Disease Response by This Target Gene | [4] | |||
| Response Summary | METTL3 acts on the m6A functional site of 1956 bp in hsa_circ_0008542. RNA demethylase ALKBH5 inhibits the binding of circ_0008542 with miRNA-185-5p to correct the bone resorption process. | |||
| Responsed Disease | Diseases of the musculoskeletal system [ICD-11: FC0Z] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Cell Process | RNA stability | |||
| In-vitro Model | RAW 264.7 | Mouse leukemia | Mus musculus | CVCL_0493 |
| MC3T3-E1 | Normal | Mus musculus | CVCL_0409 | |
| In-vivo Model | Circ_0008542, where rats were injected with exosomes containing circ_0008542 into the tail vein for 8 weeks. | |||
| Experiment 2 Reporting the m6A-centered Disease Response by This Target Gene | [4] | |||
| Response Summary | METTL3 acts on the m6A functional site of 1956 bp in hsa_circ_0008542. RNA demethylase ALKBH5 inhibits the binding of circ_0008542 with miRNA-185-5p to correct the bone resorption process. | |||
| Responsed Disease | Diseases of the musculoskeletal system [ICD-11: FC0Z] | |||
| Target Regulator | RNA demethylase ALKBH5 (ALKBH5) | ERASER | ||
| Target Regulation | Down regulation | |||
| Cell Process | RNA stability | |||
| In-vitro Model | RAW 264.7 | Mouse leukemia | Mus musculus | CVCL_0493 |
| MC3T3-E1 | Normal | Mus musculus | CVCL_0409 | |
| In-vivo Model | Circ_0008542, where rats were injected with exosomes containing circ_0008542 into the tail vein for 8 weeks. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Disease
| In total 2 item(s) under this disease | ||
| Crosstalk ID: M6ACROT05569 | ||
| m6A Regulator | Methyltransferase-like 3 (METTL3) | |
| m6A Target | hsa_circ_0008542 (Circ_PHF12) | |
| Epigenetic Regulator | hsa_circ_0008542 (Circ_PHF12) | |
| Regulated Target | hsa-miR-185-5p | |
| Crosstalk relationship | m6A → ncRNA | |
| Crosstalk ID: M6ACROT05570 | ||
| m6A Regulator | RNA demethylase ALKBH5 (ALKBH5) | |
| m6A Target | hsa_circ_0008542 (Circ_PHF12) | |
| Epigenetic Regulator | hsa_circ_0008542 (Circ_PHF12) | |
| Regulated Target | hsa-miR-185-5p | |
| Crosstalk relationship | m6A → ncRNA | |
References