m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01617)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: YTH domain-containing protein 1 (YTHDC1)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT03121 | ||
| Epigenetic Regulator | Histone deacetylase 2 (HDAC2) | |
| Crosstalk relationship | Histone modification → m6A | |
| Disease | Clear cell renal cell carcinoma | |
| Drug | Sunitinib | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01617)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE003152 | Click to Show/Hide the Full List | ||
| mod site | chr9:73154577-73154578:+ | [2] | |
| Sequence | CCTTCTGAGTAGATGGGACTACAGGTGCACACCACCATGCC | ||
| Transcript ID List | ENST00000257497.11; ENST00000415424.5; ENST00000456643.5; ENST00000468639.5 | ||
| External Link | RMBase: RNA-editing_site_135802 | ||
N6-methyladenosine (m6A)
| In total 38 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE088127 | Click to Show/Hide the Full List | ||
| mod site | chr9:73154213-73154214:+ | [3] | |
| Sequence | CCAGGGAAGGTGTGGGAAGGACTTGTGAAATACATATTCGA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; fibroblasts; A549; Huh7; HEK293A-TOA; MSC; TIME; HEC-1-A | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000468639.5; ENST00000456643.5; ENST00000415424.5; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824302 | ||
| mod ID: M6ASITE088128 | Click to Show/Hide the Full List | ||
| mod site | chr9:73154240-73154241:+ | [3] | |
| Sequence | AAATACATATTCGAGGAAAAACTATGCACAAGGCCGTGCAT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; fibroblasts; A549; Huh7; HEK293A-TOA; MSC; TIME; HEC-1-A | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000415424.5; ENST00000257497.11; ENST00000456643.5; ENST00000468639.5 | ||
| External Link | RMBase: m6A_site_824303 | ||
| mod ID: M6ASITE088129 | Click to Show/Hide the Full List | ||
| mod site | chr9:73154271-73154272:+ | [4] | |
| Sequence | GGCCGTGCATTTAAAAATAAACTCCCTAAGGCTGGGGTGAA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | fibroblasts; A549; HEK293A-TOA; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000456643.5; ENST00000468639.5; ENST00000415424.5; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824304 | ||
| mod ID: M6ASITE088130 | Click to Show/Hide the Full List | ||
| mod site | chr9:73154292-73154293:+ | [5] | |
| Sequence | CTCCCTAAGGCTGGGGTGAAACCTGCTACGGTCTGCGCAAG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HEK293A-TOA; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000415424.5; ENST00000468639.5; ENST00000257497.11; ENST00000456643.5 | ||
| External Link | RMBase: m6A_site_824305 | ||
| mod ID: M6ASITE088131 | Click to Show/Hide the Full List | ||
| mod site | chr9:73158521-73158522:+ | [4] | |
| Sequence | TCTAACTGTTTTCTTTCCAGACACTTTTTCAAAAATGGCAA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | fibroblasts; Jurkat; iSLK; MSC; TIME; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000468639.5; ENST00000376911.1; ENST00000456643.5; ENST00000415424.5 | ||
| External Link | RMBase: m6A_site_824306 | ||
| mod ID: M6ASITE088132 | Click to Show/Hide the Full List | ||
| mod site | chr9:73158697-73158698:+ | [6] | |
| Sequence | TTCTCTCTCATTCTTAGCAAACTGTGAAGTCATCCAAAGGT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | Jurkat; iSLK; MSC; TIME; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000415424.5; ENST00000376911.1; ENST00000468639.5; ENST00000257497.11; ENST00000456643.5 | ||
| External Link | RMBase: m6A_site_824307 | ||
| mod ID: M6ASITE088133 | Click to Show/Hide the Full List | ||
| mod site | chr9:73159370-73159371:+ | [7] | |
| Sequence | TGACATTCTAACTAAGCGAAACAATGCACAGCGTCAACAGA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | peripheral-blood; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000468639.5; ENST00000257497.11; ENST00000415424.5; ENST00000376911.1; ENST00000456643.5 | ||
| External Link | RMBase: m6A_site_824308 | ||
| mod ID: M6ASITE088134 | Click to Show/Hide the Full List | ||
| mod site | chr9:73159414-73159415:+ | [7] | |
| Sequence | AAGCAGCATATCTCCAGGAAACAGGAAAGGTAAGTTAGAGT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000456643.5; ENST00000376911.1; ENST00000415424.5; ENST00000257497.11; ENST00000468639.5 | ||
| External Link | RMBase: m6A_site_824309 | ||
| mod ID: M6ASITE088135 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160274-73160275:+ | [8] | |
| Sequence | TTTTGTAGCCCCTGGATGAAACACTGAAGAAAGCCCTTACA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | CD34 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000495713.5; ENST00000456643.5; ENST00000257497.11; ENST00000415424.5 | ||
| External Link | RMBase: m6A_site_824310 | ||
| mod ID: M6ASITE088136 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160331-73160332:+ | [8] | |
| Sequence | TTGTTTTAGCTCTGCTAAAAACTCCAGCGCAATTTGATGCT | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | CD34; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000456643.5; ENST00000495713.5; ENST00000257497.11; ENST00000489109.1; ENST00000415424.5; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824311 | ||
| mod ID: M6ASITE088137 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160357-73160358:+ | [8] | |
| Sequence | GCGCAATTTGATGCTGATGAACTTCGTGCTGCCATGAAGGT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | CD34; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000495713.5; ENST00000489109.1; ENST00000376911.1; ENST00000257497.11; ENST00000456643.5 | ||
| External Link | RMBase: m6A_site_824312 | ||
| mod ID: M6ASITE088138 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160811-73160812:+ | [8] | |
| Sequence | TTCAAATTTAGGGCCTTGGAACTGATGAAGATACTCTAATT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | CD34; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000489109.1; ENST00000456643.5; ENST00000257497.11; ENST00000495713.5 | ||
| External Link | RMBase: m6A_site_824313 | ||
| mod ID: M6ASITE088139 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160850-73160851:+ | [9] | |
| Sequence | TTGAGATTTTGGCATCAAGAACTAACAAAGAAATCAGAGAC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000489109.1; ENST00000456643.5; ENST00000495713.5; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824314 | ||
| mod ID: M6ASITE088140 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160854-73160855:+ | [10] | |
| Sequence | GATTTTGGCATCAAGAACTAACAAAGAAATCAGAGACATTA | ||
| Motif Score | 2.168095238 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000376911.1; ENST00000456643.5; ENST00000495713.5; ENST00000489109.1 | ||
| External Link | RMBase: m6A_site_824315 | ||
| mod ID: M6ASITE088141 | Click to Show/Hide the Full List | ||
| mod site | chr9:73160869-73160870:+ | [10] | |
| Sequence | AACTAACAAAGAAATCAGAGACATTAACAGGGTCTACAGAG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | hESC-HEK293T; HEC-1-A | ||
| Seq Type List | MAZTER-seq; m6A-seq | ||
| Transcript ID List | ENST00000489109.1; ENST00000456643.5; ENST00000376911.1; ENST00000257497.11; ENST00000495713.5 | ||
| External Link | RMBase: m6A_site_824316 | ||
| mod ID: M6ASITE088142 | Click to Show/Hide the Full List | ||
| mod site | chr9:73162805-73162806:+ | [9] | |
| Sequence | GAAGAGAGATCTGGCCAAAGACATAACCTCAGACACATCTG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000495713.5; ENST00000376911.1; ENST00000456643.5; ENST00000489109.1 | ||
| External Link | RMBase: m6A_site_824317 | ||
| mod ID: M6ASITE088143 | Click to Show/Hide the Full List | ||
| mod site | chr9:73162817-73162818:+ | [9] | |
| Sequence | GGCCAAAGACATAACCTCAGACACATCTGGAGATTTTCGGA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000495713.5; ENST00000489109.1; ENST00000376911.1; ENST00000456643.5; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824318 | ||
| mod ID: M6ASITE088144 | Click to Show/Hide the Full List | ||
| mod site | chr9:73163491-73163492:+ | [11] | |
| Sequence | TCAGGGTGACCGATCTGAGGACTTTGGTGTGAATGAAGACT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | H1299; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000456643.5; ENST00000376911.1; ENST00000489109.1; ENST00000495713.5 | ||
| External Link | RMBase: m6A_site_824319 | ||
| mod ID: M6ASITE088145 | Click to Show/Hide the Full List | ||
| mod site | chr9:73163509-73163510:+ | [11] | |
| Sequence | GGACTTTGGTGTGAATGAAGACTTGGCTGATTCAGATGCCA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | A549; H1299; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000489109.1; ENST00000495713.5; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824320 | ||
| mod ID: M6ASITE088146 | Click to Show/Hide the Full List | ||
| mod site | chr9:73165148-73165149:+ | [11] | |
| Sequence | CAGGAGAAAGGAGAAAGGGGACAGACGTAAACGTGTTCAAT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | A549; H1299; endometrial; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000495713.5; ENST00000257497.11; ENST00000489109.1 | ||
| External Link | RMBase: m6A_site_824321 | ||
| mod ID: M6ASITE088147 | Click to Show/Hide the Full List | ||
| mod site | chr9:73165290-73165291:+ | [11] | |
| Sequence | ACAAATAAGAGAAAGTAAAAACAGAACCCTTTTTCAATATC | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | A549 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000257497.11; ENST00000495713.5; ENST00000489109.1 | ||
| External Link | RMBase: m6A_site_824322 | ||
| mod ID: M6ASITE088148 | Click to Show/Hide the Full List | ||
| mod site | chr9:73165295-73165296:+ | [11] | |
| Sequence | TAAGAGAAAGTAAAAACAGAACCCTTTTTCAATATCACTCC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | A549 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000495713.5; ENST00000376911.1; ENST00000257497.11; ENST00000489109.1 | ||
| External Link | RMBase: m6A_site_824323 | ||
| mod ID: M6ASITE088149 | Click to Show/Hide the Full List | ||
| mod site | chr9:73165505-73165506:+ | [9] | |
| Sequence | GAAAAGACATGCATAACAGAACAAATGAAATTAGAATGAAG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000489109.1; ENST00000495713.5; rmsk_2775390; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824324 | ||
| mod ID: M6ASITE088150 | Click to Show/Hide the Full List | ||
| mod site | chr9:73165530-73165531:+ | [9] | |
| Sequence | TGAAATTAGAATGAAGAAAAACAAAAAAAAAAAAACAAAAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; rmsk_2775390; ENST00000489109.1; ENST00000376911.1; rmsk_2775391; ENST00000495713.5 | ||
| External Link | RMBase: m6A_site_824325 | ||
| mod ID: M6ASITE088151 | Click to Show/Hide the Full List | ||
| mod site | chr9:73166135-73166136:+ | [9] | |
| Sequence | GTACAGTAAGCATGACATGAACAAAGTTCTGGACCTGGAGT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000495713.5; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824326 | ||
| mod ID: M6ASITE088152 | Click to Show/Hide the Full List | ||
| mod site | chr9:73166147-73166148:+ | [9] | |
| Sequence | TGACATGAACAAAGTTCTGGACCTGGAGTTGAAAGGTGACA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000495713.5; ENST00000376911.1; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824327 | ||
| mod ID: M6ASITE088153 | Click to Show/Hide the Full List | ||
| mod site | chr9:73167507-73167508:+ | [10] | |
| Sequence | CTCTAACAGTGAAGTGCGCCACAAGCAAACCAGCTTTCTTT | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000495713.5; ENST00000257497.11; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824328 | ||
| mod ID: M6ASITE088154 | Click to Show/Hide the Full List | ||
| mod site | chr9:73167515-73167516:+ | [9] | |
| Sequence | GTGAAGTGCGCCACAAGCAAACCAGCTTTCTTTGCAGAGAA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000495713.5; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824329 | ||
| mod ID: M6ASITE088155 | Click to Show/Hide the Full List | ||
| mod site | chr9:73167611-73167612:+ | [9] | |
| Sequence | AAGAATTATTTGTAGAAAGAACAGAAAACCTCATGTTGTTT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000257497.11; ENST00000495713.5 | ||
| External Link | RMBase: m6A_site_824330 | ||
| mod ID: M6ASITE088156 | Click to Show/Hide the Full List | ||
| mod site | chr9:73167618-73167619:+ | [9] | |
| Sequence | ATTTGTAGAAAGAACAGAAAACCTCATGTTGTTTGAAAATC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000376911.1; ENST00000495713.5 | ||
| External Link | RMBase: m6A_site_824331 | ||
| mod ID: M6ASITE088157 | Click to Show/Hide the Full List | ||
| mod site | chr9:73168373-73168374:+ | [12] | |
| Sequence | CCATGGAAGAGAAAAGTGGGACATATACTCCAGACTTTGGA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000376911.1; ENST00000491192.1 | ||
| External Link | RMBase: m6A_site_824332 | ||
| mod ID: M6ASITE088158 | Click to Show/Hide the Full List | ||
| mod site | chr9:73168386-73168387:+ | [12] | |
| Sequence | AAGTGGGACATATACTCCAGACTTTGGAAATCCAGGTAGCA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000376911.1; ENST00000491192.1 | ||
| External Link | RMBase: m6A_site_824333 | ||
| mod ID: M6ASITE088159 | Click to Show/Hide the Full List | ||
| mod site | chr9:73168560-73168561:+ | [12] | |
| Sequence | GGTAACATAACCTTCTCAAGACAGTAAGTATAGAGTGATGG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000491192.1; ENST00000376911.1; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824334 | ||
| mod ID: M6ASITE088160 | Click to Show/Hide the Full List | ||
| mod site | chr9:73168717-73168718:+ | [12] | |
| Sequence | ACAGTGTTTTAAATAGATAGACTAGTTTATTAGATTTGCAG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000491192.1; ENST00000376911.1; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824335 | ||
| mod ID: M6ASITE088161 | Click to Show/Hide the Full List | ||
| mod site | chr9:73168769-73168770:+ | [12] | |
| Sequence | CCTTTTTTTGTAATTATTGGACAGTGTAGAGACCGGATGGT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000376911.1; ENST00000257497.11; ENST00000491192.1 | ||
| External Link | RMBase: m6A_site_824336 | ||
| mod ID: M6ASITE088162 | Click to Show/Hide the Full List | ||
| mod site | chr9:73168780-73168781:+ | [12] | |
| Sequence | AATTATTGGACAGTGTAGAGACCGGATGGTGAGAGATGAGT | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000491192.1; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824337 | ||
| mod ID: M6ASITE088163 | Click to Show/Hide the Full List | ||
| mod site | chr9:73169089-73169090:+ | [10] | |
| Sequence | GGTTTCCCGTTCTGAAATTGACATGAATGATATCAAAGCAT | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000257497.11; ENST00000491192.1; ENST00000376911.1 | ||
| External Link | RMBase: m6A_site_824338 | ||
| mod ID: M6ASITE088164 | Click to Show/Hide the Full List | ||
| mod site | chr9:73170107-73170108:+ | [10] | |
| Sequence | CTCTTTGTGGAGGAAACTAAACATTCCCTTGATGGTCTCAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000491192.1; ENST00000376911.1; ENST00000257497.11 | ||
| External Link | RMBase: m6A_site_824339 | ||
References