m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00890)
Target Name SH3 domain-binding protein 5 (SH3BP5)
Synonyms
SH3BP-5; SH3 domain-binding protein that preferentially associates with BTK
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Gene Name SH3BP5
Chromosomal Location 3p25.1
Family SH3BP5 family
Function
Functions as a guanine nucleotide exchange factor (GEF) with specificity for RAB11A and RAB25 (PubMed:26506309, PubMed:30217979). Inhibits the auto- and transphosphorylation activity of BTK. Plays a negative regulatory role in BTK-related cytoplasmic signaling in B-cells. May be involved in BCR-induced apoptotic cell death.
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Gene ID 9467
Uniprot ID
3BP5_HUMAN
HGNC ID
HGNC:10827
KEGG ID
hsa:9467
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
DNA modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
 Regulator Info 
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT02153
 Crosstalk Info 
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
 Disease Info 
Drug Metformin
 Drug Info 
Crosstalk ID: M6ACROT02166
 Crosstalk Info 
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 3B (DNMT3B)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
 Disease Info 
Drug Metformin
 Drug Info 
Crosstalk ID: M6ACROT02179
 Crosstalk Info 
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
 Disease Info 
Drug Osimertinib
 Drug Info 
Crosstalk ID: M6ACROT02192
 Crosstalk Info 
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 3B (DNMT3B)
Regulated Target Methyltransferase-like protein 3 (METTL3)
Crosstalk relationship DNA modification → m6A
Disease Lung cancer
 Disease Info 
Drug Osimertinib
 Drug Info 
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
 Regulator Info 
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03389
 Crosstalk Info 
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Lung cancer
 Disease Info 
Drug Gefitinib
 Drug Info 
Crosstalk ID: M6ACROT03402
 Crosstalk Info 
Regulated Target Histone H3 lysine 4 monomethylation (H3K4me1)
Crosstalk relationship Histone modification → m6A
Disease Lung cancer
 Disease Info 
Drug Gefitinib
 Drug Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00890)
SH3 domain-binding protein 5 (SH3BP5)
Adenosine-to-Inosine editing (A-to-I)
In total 5 m6A sequence/site(s) in this target gene
mod ID: A2ISITE011574 Click to Show/Hide the Full List
mod site chr3:15266213-15266214:- [2]
Sequence TTCTTAGGTCTCATTGCCCAAGGACGCAGTAAGAATCAGGA
Transcript ID List ENST00000450625.1; ENST00000366391.6; ENST00000408919.7; ENST00000383791.8; ENST00000426925.5; ENST00000417936.5; ENST00000412806.1
External Link RMBase: RNA-editing_site_94974
mod ID: A2ISITE011575 Click to Show/Hide the Full List
mod site chr3:15281781-15281782:- [2]
Sequence TCGACCTCCTGATCTCATGTAATCCACCTGCCTCAGCCTCC
Transcript ID List ENST00000412806.1; ENST00000383791.8; ENST00000450625.1; ENST00000465894.6; ENST00000426925.5; ENST00000408919.7
External Link RMBase: RNA-editing_site_94975
mod ID: A2ISITE011576 Click to Show/Hide the Full List
mod site chr3:15284147-15284148:- [2]
Sequence GCTTCAGTGAAGCTTACTTAAGCACGGCCAGAGGAGCAGCT
Transcript ID List ENST00000450625.1; ENST00000383791.8; ENST00000426925.5; ENST00000465894.6; ENST00000408919.7; ENST00000412806.1
External Link RMBase: RNA-editing_site_94976
mod ID: A2ISITE011577 Click to Show/Hide the Full List
mod site chr3:15302972-15302973:- [2]
Sequence CTTCTAAACATACAAAAATTAGCCGGGTATGGTGGTGGGCG
Transcript ID List ENST00000408919.7; ENST00000465894.6; ENST00000450625.1; ENST00000426925.5; rmsk_896091; ENST00000383791.8; ENST00000412806.1
External Link RMBase: RNA-editing_site_94977
mod ID: A2ISITE011578 Click to Show/Hide the Full List
mod site chr3:15303240-15303241:- [2]
Sequence AGAGTTCAGATTTCCCAAGAAGATCTAAGCAGTTGGTCCAA
Transcript ID List ENST00000450625.1; ENST00000426925.5; ENST00000408919.7; ENST00000412806.1; ENST00000465894.6; ENST00000383791.8
External Link RMBase: RNA-editing_site_94978
2'-O-Methylation (2'-O-Me)
In total 3 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000303 Click to Show/Hide the Full List
mod site chr3:15309351-15309352:- [3]
Sequence CCATCGATTCTCGGCCTTTTGGCTAAGATCAAGTGAAAACA
Seq Type List RiboMeth-seq
Transcript ID List ENST00000408919.7; rmsk_896110; ENST00000459627.1; ENST00000412806.1; ENST00000450625.1; ENST00000426925.5; ENST00000465894.6; ENST00000383791.8
External Link RMBase: Nm_site_4890
mod ID: 2OMSITE000304 Click to Show/Hide the Full List
mod site chr3:15309358-15309359:- [4]
Sequence AAAAACCCCATCGATTCTCGGCCTTTTGGCTAAGATCAAGT
Transcript ID List ENST00000383791.8; ENST00000450625.1; ENST00000426925.5; ENST00000408919.7; ENST00000465894.6; ENST00000412806.1; rmsk_896110; ENST00000459627.1
External Link RMBase: Nm_site_4891
mod ID: 2OMSITE000305 Click to Show/Hide the Full List
mod site chr3:15309359-15309360:- [4]
Sequence CAAAAACCCCATCGATTCTCGGCCTTTTGGCTAAGATCAAG
Transcript ID List ENST00000383791.8; ENST00000408919.7; ENST00000426925.5; ENST00000412806.1; rmsk_896110; ENST00000465894.6; ENST00000450625.1; ENST00000459627.1
External Link RMBase: Nm_site_4892
5-methylcytidine (m5C)
In total 6 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003047 Click to Show/Hide the Full List
mod site chr3:15255669-15255670:- [5]
Sequence TCCACTTTATCCCACGATATCTAAATGAAAAAGAAAGAAAA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000383791.8; ENST00000408919.7; ENST00000412806.1; ENST00000426925.5
External Link RMBase: m5C_site_31708
mod ID: M5CSITE003048 Click to Show/Hide the Full List
mod site chr3:15256066-15256067:-
Sequence GATTCATCCTGGGCCCTGGCCGATGTGCATATCAACATTTA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000426925.5; ENST00000408919.7; ENST00000412806.1; ENST00000383791.8
External Link RMBase: m5C_site_31709
mod ID: M5CSITE003049 Click to Show/Hide the Full List
mod site chr3:15256151-15256152:- [5]
Sequence GAGAACCGGATGAAGCAGCTCTCCCTACAGTGCTCAAAGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000412806.1; ENST00000383791.8; ENST00000426925.5; ENST00000408919.7
External Link RMBase: m5C_site_31710
mod ID: M5CSITE003050 Click to Show/Hide the Full List
mod site chr3:15259052-15259053:- [5]
Sequence TAGTCTCCTGTTCTCTTGATCAGCAACTGAAAAAGACTGTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000366391.6; ENST00000383791.8; ENST00000408919.7; ENST00000412806.1; ENST00000426925.5
External Link RMBase: m5C_site_31711
mod ID: M5CSITE003051 Click to Show/Hide the Full List
mod site chr3:15332524-15332525:-
Sequence GCGTCTCCCGGGTGTCGGCCCCGGCGGCTCCCCGACCGTGC
Cell/Tissue List HEK293T
Seq Type List Bisulfite-seq
Transcript ID List ENST00000426925.5; ENST00000383791.8; ENST00000465894.6; ENST00000412806.1; ENST00000408919.7
External Link RMBase: m5C_site_31712
mod ID: M5CSITE003052 Click to Show/Hide the Full List
mod site chr3:15332577-15332578:- [5]
Sequence CGCGCCCATTTCCTCTGCTCCGCCGCGGCCGGAGGTATCCG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000383791.8; ENST00000465894.6; ENST00000408919.7; ENST00000426925.5
External Link RMBase: m5C_site_31713
N6-methyladenosine (m6A)
In total 47 m6A sequence/site(s) in this target gene
mod ID: M6ASITE059860 Click to Show/Hide the Full List
mod site chr3:15254895-15254896:- [6]
Sequence TAATTACAAGGTTATTTTGTACTTGTCTTAATACACTAAGT
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000383791.8
External Link RMBase: m6A_site_579021
mod ID: M6ASITE059861 Click to Show/Hide the Full List
mod site chr3:15254951-15254952:- [6]
Sequence TCATTTGTAAATCTCTTCATACAATAGTGACTTCTTTTTTG
Motif Score 2.110482143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000383791.8
External Link RMBase: m6A_site_579022
mod ID: M6ASITE059862 Click to Show/Hide the Full List
mod site chr3:15254989-15254990:- [7]
Sequence TTCAAACTGTTAATTCTGTCACAGCCTGTATATTTTAGTCA
Motif Score 2.047297619
Cell/Tissue List kidney; liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000383791.8
External Link RMBase: m6A_site_579023
mod ID: M6ASITE059863 Click to Show/Hide the Full List
mod site chr3:15255004-15255005:- [8]
Sequence AAAAAGCAACCCTCTTTCAAACTGTTAATTCTGTCACAGCC
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579025
mod ID: M6ASITE059864 Click to Show/Hide the Full List
mod site chr3:15255111-15255112:- [8]
Sequence AATAGTAGTTAAGTGTTAAGACTGCTTTTCTTTAACGTTTT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579027
mod ID: M6ASITE059865 Click to Show/Hide the Full List
mod site chr3:15255187-15255188:- [8]
Sequence ACTAGTATTCCTTAGAGGAAACAGTTCTTTAAAGTTAGGAA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579031
mod ID: M6ASITE059866 Click to Show/Hide the Full List
mod site chr3:15255207-15255208:- [6]
Sequence TTATTTAAGGGTTATGCTGCACTAGTATTCCTTAGAGGAAA
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579032
mod ID: M6ASITE059867 Click to Show/Hide the Full List
mod site chr3:15255275-15255276:- [6]
Sequence TTGCCACTGTTATTAGATTGACAAGATGTTAATTTCTCTGT
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579033
mod ID: M6ASITE059868 Click to Show/Hide the Full List
mod site chr3:15255360-15255361:- [7]
Sequence GCTGTGGGGGAGAAGGTTCTACAGCATAAGCCTTATCCTGC
Motif Score 2.078666667
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000412806.1; ENST00000383791.8
External Link RMBase: m6A_site_579034
mod ID: M6ASITE059869 Click to Show/Hide the Full List
mod site chr3:15255401-15255402:- [9]
Sequence GGGGGATGAGGGTAGGAGGGACTTATAGAAGGGGATTTGTG
Motif Score 4.065041667
Cell/Tissue List HEK293T; Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579037
mod ID: M6ASITE059870 Click to Show/Hide the Full List
mod site chr3:15255491-15255492:- [8]
Sequence ATGCTGGGATACCCATTAAAACCATTTTCTAGAAGGCTACC
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1
External Link RMBase: m6A_site_579038
mod ID: M6ASITE059871 Click to Show/Hide the Full List
mod site chr3:15255567-15255568:- [8]
Sequence AAAAAAAAAAAAATCCAAGAACACAATTCATTTTCACCACC
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000412806.1; ENST00000383791.8
External Link RMBase: m6A_site_579040
mod ID: M6ASITE059872 Click to Show/Hide the Full List
mod site chr3:15255630-15255631:- [8]
Sequence AACCCACACACAAAGCAAAAACTCAAGTATTAAGAGCACAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000426925.5; ENST00000412806.1; ENST00000383791.8
External Link RMBase: m6A_site_579041
mod ID: M6ASITE059873 Click to Show/Hide the Full List
mod site chr3:15255649-15255650:- [8]
Sequence CTAAATGAAAAAGAAAGAAAACCCACACACAAAGCAAAAAC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000408919.7; ENST00000412806.1; ENST00000426925.5; ENST00000383791.8
External Link RMBase: m6A_site_579042
mod ID: M6ASITE059874 Click to Show/Hide the Full List
mod site chr3:15255749-15255750:- [7]
Sequence GCCAGGCCAAAGTGGGGGCAACAGCTTGCTTCTCTTTCTCT
Motif Score 2.173910714
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000408919.7; ENST00000412806.1; ENST00000383791.8; ENST00000426925.5
External Link RMBase: m6A_site_579045
mod ID: M6ASITE059875 Click to Show/Hide the Full List
mod site chr3:15255795-15255796:- [10]
Sequence TAACTAGTTCCTATGAAAGAACCAGAGCTGGGAAGATGGCT
Motif Score 2.930744048
Cell/Tissue List CD34; HEK293T; HeLa
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000408919.7; ENST00000412806.1; ENST00000426925.5; ENST00000383791.8
External Link RMBase: m6A_site_579046
mod ID: M6ASITE059876 Click to Show/Hide the Full List
mod site chr3:15255845-15255846:- [10]
Sequence AGGTTCACAGCCTTTGTGGAACATTCCGTATAACGGCATTG
Motif Score 2.951386905
Cell/Tissue List CD34; HEK293T; brain; kidney; HeLa; U2OS; iSLK; TIME
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq
Transcript ID List ENST00000412806.1; ENST00000408919.7; ENST00000426925.5; ENST00000383791.8
External Link RMBase: m6A_site_579048
mod ID: M6ASITE059877 Click to Show/Hide the Full List
mod site chr3:15255874-15255875:- [8]
Sequence AGAGTTCTTGTTGTGGGTAGACTGTGACTAGGTTCACAGCC
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; U2OS; hNPCs; GM12878; iSLK; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000383791.8; ENST00000412806.1; ENST00000426925.5; ENST00000408919.7
External Link RMBase: m6A_site_579051
mod ID: M6ASITE059878 Click to Show/Hide the Full List
mod site chr3:15255976-15255977:- [8]
Sequence ATCTTACACGTCTACTCTAAACTGCTCTAATGAAGTTTCAG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000412806.1; ENST00000383791.8; ENST00000408919.7
External Link RMBase: m6A_site_579056
mod ID: M6ASITE059879 Click to Show/Hide the Full List
mod site chr3:15255983-15255984:- [6]
Sequence ATGCCAAATCTTACACGTCTACTCTAAACTGCTCTAATGAA
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000408919.7; ENST00000412806.1; ENST00000426925.5; ENST00000383791.8
External Link RMBase: m6A_site_579057
mod ID: M6ASITE059880 Click to Show/Hide the Full List
mod site chr3:15256029-15256030:- [8]
Sequence TTTATACATGGAACTGGAGAACATTGTGCCAATAATCATTT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000383791.8; ENST00000412806.1; ENST00000408919.7
External Link RMBase: m6A_site_579059
mod ID: M6ASITE059881 Click to Show/Hide the Full List
mod site chr3:15256037-15256038:- [8]
Sequence TATCAACATTTATACATGGAACTGGAGAACATTGTGCCAAT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000412806.1; ENST00000426925.5; ENST00000383791.8; ENST00000408919.7
External Link RMBase: m6A_site_579060
mod ID: M6ASITE059882 Click to Show/Hide the Full List
mod site chr3:15256052-15256053:- [11]
Sequence CCTGGCCGATGTGCATATCAACATTTATACATGGAACTGGA
Motif Score 2.173910714
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000412806.1; ENST00000383791.8; ENST00000426925.5; ENST00000408919.7
External Link RMBase: m6A_site_579061
mod ID: M6ASITE059883 Click to Show/Hide the Full List
mod site chr3:15256145-15256146:- [7]
Sequence CGGATGAAGCAGCTCTCCCTACAGTGCTCAAAGGGAAGAGA
Motif Score 2.078666667
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000412806.1; ENST00000408919.7; ENST00000383791.8; ENST00000426925.5
External Link RMBase: m6A_site_579062
mod ID: M6ASITE059884 Click to Show/Hide the Full List
mod site chr3:15256167-15256168:- [8]
Sequence TGAGGGCCAGGCCTTGGAGAACCGGATGAAGCAGCTCTCCC
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; U2OS; hNPCs; Jurkat; peripheral-blood; HEK293A-TOA; TIME; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000408919.7; ENST00000412806.1; ENST00000426925.5; ENST00000383791.8
External Link RMBase: m6A_site_579063
mod ID: M6ASITE059885 Click to Show/Hide the Full List
mod site chr3:15256273-15256274:- [8]
Sequence CAGAAGGGGCAGAGAATAAAACAAGTGACAAAGCCAACAAC
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; U2OS; hNPCs; MT4; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000408919.7; ENST00000412806.1; ENST00000383791.8
External Link RMBase: m6A_site_579064
mod ID: M6ASITE059886 Click to Show/Hide the Full List
mod site chr3:15256299-15256300:- [8]
Sequence TCCTTGTATTTCTATAGGAGACAGGGCAGAAGGGGCAGAGA
Motif Score 2.897386905
Cell/Tissue List HeLa; brain; HepG2; MT4; Huh7; endometrial
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000383791.8; ENST00000426925.5; ENST00000408919.7; ENST00000412806.1
External Link RMBase: m6A_site_579065
mod ID: M6ASITE059887 Click to Show/Hide the Full List
mod site chr3:15257021-15257022:- [8]
Sequence GTGTCCAGCTTTAGTTCAGGACCAACAAGCCCGTCTGAGAT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; Huh7; peripheral-blood; GSC-11; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412806.1; ENST00000426925.5; ENST00000383791.8; ENST00000408919.7
External Link RMBase: m6A_site_579080
mod ID: M6ASITE059888 Click to Show/Hide the Full List
mod site chr3:15257050-15257051:- [8]
Sequence TGTCTGAAGATGACTCGGAAACCCAGTCCGTGTCCAGCTTT
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; Huh7; peripheral-blood; GSC-11; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000408919.7; ENST00000412806.1; ENST00000383791.8; ENST00000426925.5
External Link RMBase: m6A_site_579084
mod ID: M6ASITE059889 Click to Show/Hide the Full List
mod site chr3:15258852-15258853:- [8]
Sequence GAGGATCTGCCAGGGAGCAAACCTGAGCCTGATGCCATTTC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; Huh7; Jurkat; peripheral-blood; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000383791.8; ENST00000408919.7; ENST00000412806.1
External Link RMBase: m6A_site_579106
mod ID: M6ASITE059890 Click to Show/Hide the Full List
mod site chr3:15258973-15258974:- [8]
Sequence GTACAAGATGGCCCTGAAGAACCTGGAGATGATCTCAGATG
Motif Score 2.930744048
Cell/Tissue List HeLa; Jurkat; peripheral-blood; endometrial; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000426925.5; ENST00000408919.7; ENST00000412806.1; ENST00000366391.6; ENST00000383791.8
External Link RMBase: m6A_site_579107
mod ID: M6ASITE059891 Click to Show/Hide the Full List
mod site chr3:15259014-15259015:- [8]
Sequence GTGGATGACCTGCAGGCCAAACTGACCCTGGCAAAAGGCGA
Motif Score 2.627720238
Cell/Tissue List HeLa; Jurkat; peripheral-blood; endometrial; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000366391.6; ENST00000412806.1; ENST00000383791.8; ENST00000408919.7; ENST00000426925.5
External Link RMBase: m6A_site_579108
mod ID: M6ASITE059892 Click to Show/Hide the Full List
mod site chr3:15259037-15259038:- [8]
Sequence TTGATCAGCAACTGAAAAAGACTGTGGATGACCTGCAGGCC
Motif Score 3.319380952
Cell/Tissue List HeLa; Huh7; Jurkat; peripheral-blood; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000408919.7; ENST00000383791.8; ENST00000412806.1; ENST00000366391.6
External Link RMBase: m6A_site_579109
mod ID: M6ASITE059893 Click to Show/Hide the Full List
mod site chr3:15259790-15259791:- [8]
Sequence TTCTGCAGGCCTTATTTTGAACTCAAGGCAAAGTACTATGT
Motif Score 3.373380952
Cell/Tissue List HeLa; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000408919.7; ENST00000426925.5; ENST00000366391.6; ENST00000412806.1; ENST00000383791.8
External Link RMBase: m6A_site_579129
mod ID: M6ASITE059894 Click to Show/Hide the Full List
mod site chr3:15262167-15262168:- [7]
Sequence GAAACTCAAGAGAGCCATCAACAAGTCCAAGTAAGTCTGGA
Motif Score 2.173910714
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000450625.1; ENST00000412806.1; ENST00000366391.6; ENST00000408919.7; ENST00000383791.8; ENST00000426925.5; ENST00000417936.5
External Link RMBase: m6A_site_579145
mod ID: M6ASITE059895 Click to Show/Hide the Full List
mod site chr3:15262184-15262185:- [8]
Sequence ATGCGACAGCTGGAGAAGAAACTCAAGAGAGCCATCAACAA
Motif Score 2.627720238
Cell/Tissue List HeLa; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000383791.8; ENST00000450625.1; ENST00000426925.5; ENST00000366391.6; ENST00000408919.7; ENST00000412806.1; ENST00000417936.5
External Link RMBase: m6A_site_579146
mod ID: M6ASITE059896 Click to Show/Hide the Full List
mod site chr3:15262264-15262265:- [8]
Sequence TGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCTGGTGCAT
Motif Score 2.876744048
Cell/Tissue List HeLa; MT4; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000366391.6; ENST00000412806.1; ENST00000450625.1; ENST00000408919.7; ENST00000383791.8; ENST00000417936.5
External Link RMBase: m6A_site_579147
mod ID: M6ASITE059897 Click to Show/Hide the Full List
mod site chr3:15262270-15262271:- [8]
Sequence AGGTCATGGAGGCGGAGCAGACCAAGACCAGGAGCGAGCTG
Motif Score 2.876744048
Cell/Tissue List HeLa; MT4; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412806.1; ENST00000417936.5; ENST00000426925.5; ENST00000383791.8; ENST00000366391.6; ENST00000408919.7; ENST00000450625.1
External Link RMBase: m6A_site_579148
mod ID: M6ASITE059898 Click to Show/Hide the Full List
mod site chr3:15269804-15269805:- [8]
Sequence TGCTCCGTGCCGCCAAGGAGACCATCTCCCTGGCCGAGCAG
Motif Score 2.876744048
Cell/Tissue List HeLa; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000383791.8; ENST00000426925.5; ENST00000408919.7; ENST00000417936.5; ENST00000366391.6; ENST00000412806.1; ENST00000450625.1
External Link RMBase: m6A_site_579150
mod ID: M6ASITE059899 Click to Show/Hide the Full List
mod site chr3:15269845-15269846:- [8]
Sequence AGCTCAGAAAGCCACGCAGGACTTCCAGAGGGCCACAGAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000426925.5; ENST00000412806.1; ENST00000366391.6; ENST00000465894.6; ENST00000383791.8; ENST00000408919.7; ENST00000417936.5; ENST00000450625.1
External Link RMBase: m6A_site_579151
mod ID: M6ASITE059900 Click to Show/Hide the Full List
mod site chr3:15276015-15276016:- [8]
Sequence TTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTTTGTTGCC
Motif Score 2.897386905
Cell/Tissue List HeLa; U2OS; CD4T; peripheral-blood; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000465894.6; ENST00000408919.7; ENST00000383791.8; ENST00000450625.1; ENST00000426925.5; ENST00000412806.1; ENST00000366391.6
External Link RMBase: m6A_site_579152
mod ID: M6ASITE059901 Click to Show/Hide the Full List
mod site chr3:15304142-15304143:- [8]
Sequence AATTGGCAAAGCTGTGGAAGACTCCAAGCCCTACTGGGAGG
Motif Score 3.319380952
Cell/Tissue List HeLa; U2OS; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412806.1; ENST00000450625.1; ENST00000459627.1; ENST00000426925.5; ENST00000383791.8; ENST00000465894.6; ENST00000408919.7
External Link RMBase: m6A_site_579153
mod ID: M6ASITE059902 Click to Show/Hide the Full List
mod site chr3:15304174-15304175:- [8]
Sequence GCAACGGTGAAACTGGATGAACTGGTGAAGAAAATTGGCAA
Motif Score 3.373380952
Cell/Tissue List HeLa; U2OS; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000408919.7; ENST00000450625.1; ENST00000459627.1; ENST00000383791.8; ENST00000465894.6; ENST00000412806.1
External Link RMBase: m6A_site_579154
mod ID: M6ASITE059903 Click to Show/Hide the Full List
mod site chr3:15304183-15304184:- [8]
Sequence CTGGTTGAAGCAACGGTGAAACTGGATGAACTGGTGAAGAA
Motif Score 2.627720238
Cell/Tissue List HeLa; U2OS; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000465894.6; ENST00000412806.1; ENST00000408919.7; ENST00000383791.8; ENST00000459627.1; ENST00000450625.1; ENST00000426925.5
External Link RMBase: m6A_site_579155
mod ID: M6ASITE059904 Click to Show/Hide the Full List
mod site chr3:15330509-15330510:- [8]
Sequence ATCAACAGACGGGAGACTGAACTTGAGGTACAGAGAGCTGA
Motif Score 3.373380952
Cell/Tissue List HeLa; U2OS; CD4T; peripheral-blood; HEK293T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412806.1; ENST00000459627.1; ENST00000426925.5; ENST00000465894.6; ENST00000408919.7; ENST00000450625.1; ENST00000383791.8
External Link RMBase: m6A_site_579156
mod ID: M6ASITE059905 Click to Show/Hide the Full List
mod site chr3:15330514-15330515:- [8]
Sequence ATGATATCAACAGACGGGAGACTGAACTTGAGGTACAGAGA
Motif Score 3.319380952
Cell/Tissue List HeLa; U2OS; CD4T; peripheral-blood; HEK293T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000412806.1; ENST00000450625.1; ENST00000383791.8; ENST00000459627.1; ENST00000426925.5; ENST00000465894.6; ENST00000408919.7
External Link RMBase: m6A_site_579157
mod ID: M6ASITE059906 Click to Show/Hide the Full List
mod site chr3:15330560-15330561:- [8]
Sequence TCTTTTCTTCACCAGGGAGAACTGGAGAAGTTAAATCAGTC
Motif Score 3.373380952
Cell/Tissue List HeLa; U2OS; CD4T; peripheral-blood; HEK293T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000426925.5; ENST00000459627.1; ENST00000412806.1; ENST00000450625.1; ENST00000465894.6; ENST00000383791.8; ENST00000408919.7
External Link RMBase: m6A_site_579158