General Information of the m6A Target Gene (ID: M6ATAR00312)
Target Name Pyruvate kinase PKM (PKM2/PKM)
Synonyms
Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58; OIP3; PK2; PK3; PKM2
    Click to Show/Hide
Gene Name PKM
Chromosomal Location 15q23
Family pyruvate kinase family
Function
Glycolytic enzyme that catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) to ADP, generating ATP. The ratio between the highly active tetrameric form and nearly inactive dimeric form determines whether glucose carbons are channeled to biosynthetic processes or used for glycolytic ATP production. The transition between the 2 forms contributes to the control of glycolysis and is important for tumor cell proliferation and survival. In addition to its role in glycolysis, also regulates transcription. Stimulates POU5F1-mediated transcriptional activation. Promotes in a STAT1-dependent manner, the expression of the immune checkpoint protein CD274 in ARNTL/BMAL1-deficient macrophages (By similarity). Also acts as a translation regulator for a subset of mRNAs, independently of its pyruvate kinase activity: associates with subpools of endoplasmic reticulum-associated ribosomes, binds directly to the mRNAs translated at the endoplasmic reticulum and promotes translation of these endoplasmic reticulum-destined mRNAs (By similarity). Plays a general role in caspase independent cell death of tumor cells.
    Click to Show/Hide
Gene ID 5315
Uniprot ID
KPYM_HUMAN
HGNC ID
HGNC:9021
KEGG ID
hsa:5315
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
PKM can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Browse Drug
Fat mass and obesity-associated protein (FTO) [ERASER]
Representative RNA-seq result indicating the expression of this target gene regulated by FTO
Cell Line NB4 cell line Homo sapiens
Treatment: shFTO NB4 cells
Control: shNS NB4 cells
GSE103494
Regulation
logFC: 1.52E+00
p-value: 5.79E-04
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary The overexpression of demethylase FTO in the HCC tissue and cells. FTO could regulate the demethylation of Pyruvate kinase PKM (PKM2/PKM) in the hepatocellular carcinoma.
Target Regulation Down regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
Pathway Response Central carbon metabolism in cancer hsa05230
Cell Process Glucose metabolism
In-vitro Model Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
L-02 Endocervical adenocarcinoma Homo sapiens CVCL_6926
SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
In-vivo Model The transfected cells (2×106) were directly subcutaneously injected in to flank of mice. The width and length were measured every six days. After three weeks, the mice were killed and the necropsies were weighted.
YTH domain-containing family protein 1 (YTHDF1) [READER]
Representative RNA-seq result indicating the expression of this target gene regulated by YTHDF1
Cell Line AGS cell line Homo sapiens
Treatment: shYTHDF1 AGS
Control: shControl AGS
GSE159425
Regulation
logFC: 6.97E-01
p-value: 4.17E-05
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [2]
Response Summary Tumor hypoxia can transcriptionally induce HIF1alpha and post-transcriptionally inhibit the expression of miR-16-5p to promote YTHDF1 expression, which could sequentially enhance tumor glycolysis by upregulating Pyruvate kinase PKM (PKM2/PKM) and eventually increase the tumorigenesis and metastasis potential of breast cancer cells.
Target Regulation Up regulation
Responsed Disease Breast cancer ICD-11: 2C60
Pathway Response HIF-1 signaling pathway hsa04066
Cell Process Glycolysis
In-vitro Model T-47D Invasive breast carcinoma Homo sapiens CVCL_0553
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MCF-10A Normal Homo sapiens CVCL_0598
BT-474 Invasive breast carcinoma Homo sapiens CVCL_0179
In-vivo Model Each mouse was injected subcutaneously with 5 × 106 units of tumor cells to construct the tumor model.
Zinc finger CCCH domain-containing protein 13 (ZC3H13) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by ZC3H13
Cell Line Human umbilical vein endothelial cells Homo sapiens
Treatment: siKIAA0853 HUVECs
Control: siControl HUVECs
GSE167067
Regulation
logFC: -9.34E-01
p-value: 1.41E-02
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [3]
Response Summary ZC3H13 overexpression sensitized to cisplatin and weakened metabolism reprogramming of HCC cells, ZC3H13-induced m6A modified patterns substantially abolished Pyruvate kinase PKM (PKM2/PKM) mRNA stability.
Target Regulation Down regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
Responsed Drug Cisplatin Approved
Pathway Response Central carbon metabolism in cancer hsa05230
Glycolysis / Gluconeogenesis hsa00010
Cell Process Glycolysis
In-vitro Model SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
Liver cancer [ICD-11: 2C12]
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary The overexpression of demethylase FTO in the HCC tissue and cells. FTO could regulate the demethylation of Pyruvate kinase PKM (PKM2/PKM) in the hepatocellular carcinoma.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator Fat mass and obesity-associated protein (FTO) ERASER
Target Regulation Down regulation
Pathway Response Central carbon metabolism in cancer hsa05230
Cell Process Glucose metabolism
In-vitro Model Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
L-02 Endocervical adenocarcinoma Homo sapiens CVCL_6926
SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
In-vivo Model The transfected cells (2×106) were directly subcutaneously injected in to flank of mice. The width and length were measured every six days. After three weeks, the mice were killed and the necropsies were weighted.
Experiment 2 Reporting the m6A-centered Disease Response [3]
Response Summary ZC3H13 overexpression sensitized to cisplatin and weakened metabolism reprogramming of HCC cells, ZC3H13-induced m6A modified patterns substantially abolished Pyruvate kinase PKM (PKM2/PKM) mRNA stability.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator Zinc finger CCCH domain-containing protein 13 (ZC3H13) WRITER
Target Regulation Down regulation
Responsed Drug Cisplatin Approved
Pathway Response Central carbon metabolism in cancer hsa05230
Glycolysis / Gluconeogenesis hsa00010
Cell Process Glycolysis
In-vitro Model SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
Breast cancer [ICD-11: 2C60]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [2]
Response Summary Tumor hypoxia can transcriptionally induce HIF1alpha and post-transcriptionally inhibit the expression of miR-16-5p to promote YTHDF1 expression, which could sequentially enhance tumor glycolysis by upregulating Pyruvate kinase PKM (PKM2/PKM) and eventually increase the tumorigenesis and metastasis potential of breast cancer cells.
Responsed Disease Breast cancer [ICD-11: 2C60]
Target Regulator YTH domain-containing family protein 1 (YTHDF1) READER
Target Regulation Up regulation
Pathway Response HIF-1 signaling pathway hsa04066
Cell Process Glycolysis
In-vitro Model T-47D Invasive breast carcinoma Homo sapiens CVCL_0553
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MCF-10A Normal Homo sapiens CVCL_0598
BT-474 Invasive breast carcinoma Homo sapiens CVCL_0179
In-vivo Model Each mouse was injected subcutaneously with 5 × 106 units of tumor cells to construct the tumor model.
Cisplatin [Approved]
In total 1 item(s) under this drug
Experiment 1 Reporting the m6A-centered Drug Response [3]
Response Summary ZC3H13 overexpression sensitized to cisplatin and weakened metabolism reprogramming of HCC cells, ZC3H13-induced m6A modified patterns substantially abolished Pyruvate kinase PKM (PKM2/PKM) mRNA stability.
Target Regulator Zinc finger CCCH domain-containing protein 13 (ZC3H13) WRITER
Target Regulation Down regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
Pathway Response Central carbon metabolism in cancer hsa05230
Glycolysis / Gluconeogenesis hsa00010
Cell Process Glycolysis
In-vitro Model SMMC-7721 Endocervical adenocarcinoma Homo sapiens CVCL_0534
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
Hep 3B2.1-7 Childhood hepatocellular carcinoma Homo sapiens CVCL_0326
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: YTH domain-containing family protein 2 (YTHDF2)
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03418
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Liver cancer
Crosstalk ID: M6ACROT03429
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Liver cancer
Non-coding RNA
m6A Regulator: YTH domain-containing family protein 2 (YTHDF2)
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05046
Epigenetic Regulator MicroRNA 145 (MIR145)
Regulated Target YTH domain-containing family protein 2 (YTHDF2)
Crosstalk relationship ncRNA → m6A
Disease Liver cancer
Crosstalk ID: M6ACROT05316
Epigenetic Regulator FTO intronic transcript 1 (FTO-IT1)
Regulated Target FTO alpha-ketoglutarate dependent dioxygenase (FTO)
Crosstalk relationship ncRNA → m6A
Disease Liver cancer
m6A Regulator: Fat mass and obesity-associated protein (FTO)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05314
Epigenetic Regulator FTO intronic transcript 1 (FTO-IT1)
Regulated Target FTO alpha-ketoglutarate dependent dioxygenase (FTO)
Crosstalk relationship ncRNA → m6A
Disease Liver cancer
m6A Regulator: YTH domain-containing family protein 1 (YTHDF1)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05322
Epigenetic Regulator hsa-miR-16-5p
Regulated Target YTH domain-containing family protein 1 (YTHDF1)
Crosstalk relationship ncRNA → m6A
Disease Breast cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00312)
Pyruvate kinase PKM (PKM2/PKM)
Adenosine-to-Inosine editing (A-to-I)
In total 6 m6A sequence/site(s) in this target gene
mod ID: A2ISITE007040 Click to Show/Hide the Full List
mod site chr15:72202815-72202816:- [6]
Sequence ATGTCACAGGCACTTGGTGAAGGACTGGTTTCTGTGGAGTC
Transcript ID List ENST00000563986.1; ENST00000565184.5; ENST00000319622.10; ENST00000568459.5; ENST00000564440.5; ENST00000568883.5; ENST00000389093.7; ENST00000449901.6; ENST00000569857.5; ENST00000567118.5; ENST00000335181.10; ENST00000565154.5; ENST00000570166.1; ENST00000561609.5
External Link RMBase: RNA-editing_site_44978
mod ID: A2ISITE007041 Click to Show/Hide the Full List
mod site chr15:72203341-72203342:- [6]
Sequence AGTTGGACTTTCATCACCCTACCTCTGCATCTGCCTGAAGG
Transcript ID List ENST00000569857.5; ENST00000570166.1; ENST00000567118.5; ENST00000565154.5; ENST00000561609.5; ENST00000335181.10; ENST00000568883.5; ENST00000449901.6; ENST00000563986.1; ENST00000568459.5; ENST00000319622.10; ENST00000565184.5; ENST00000564440.5; ENST00000389093.7
External Link RMBase: RNA-editing_site_44979
mod ID: A2ISITE007042 Click to Show/Hide the Full List
mod site chr15:72213143-72213144:- [6]
Sequence TCCATGACCAAGTAGATTTTATTCTAGGAGAACAAAATTCT
Transcript ID List ENST00000562997.5; ENST00000565184.5; ENST00000568883.5; ENST00000567118.5; ENST00000562784.1; ENST00000564276.1; ENST00000335181.10; ENST00000565154.5; ENST00000319622.10; ENST00000567087.5; ENST00000569857.5; ENST00000561609.5; ENST00000389093.7; ENST00000449901.6; ENST00000568459.5; ENST00000564178.5; rmsk_4378892
External Link RMBase: RNA-editing_site_44980
mod ID: A2ISITE007043 Click to Show/Hide the Full List
mod site chr15:72224677-72224678:- [7]
Sequence TAGTGATGGTGTTTCACCATATTAGCCAGGCTGGTCTCGAA
Transcript ID List ENST00000567118.5; ENST00000565184.5; ENST00000449901.6; ENST00000564276.1; ENST00000567087.5; ENST00000335181.10; ENST00000569050.1; ENST00000568459.5; ENST00000561609.5; ENST00000565154.5; ENST00000566809.1; ENST00000568883.5; ENST00000389093.7; ENST00000569857.5; ENST00000319622.10
External Link RMBase: RNA-editing_site_44981
mod ID: A2ISITE007044 Click to Show/Hide the Full List
mod site chr15:72224679-72224680:- [7]
Sequence AGTAGTGATGGTGTTTCACCATATTAGCCAGGCTGGTCTCG
Transcript ID List ENST00000565184.5; ENST00000389093.7; ENST00000568459.5; ENST00000568883.5; ENST00000449901.6; ENST00000319622.10; ENST00000567118.5; ENST00000565154.5; ENST00000569857.5; ENST00000567087.5; ENST00000566809.1; ENST00000335181.10; ENST00000561609.5; ENST00000564276.1; ENST00000569050.1
External Link RMBase: RNA-editing_site_44982
mod ID: A2ISITE007045 Click to Show/Hide the Full List
mod site chr15:72224796-72224797:- [6]
Sequence CAGTGGTGCGATCTCCGTTCACTGCAGCCTCCACTTCCTGG
Transcript ID List ENST00000561609.5; ENST00000389093.7; ENST00000564276.1; ENST00000335181.10; ENST00000569050.1; ENST00000319622.10; ENST00000449901.6; ENST00000568459.5; ENST00000566809.1; ENST00000568883.5; ENST00000569857.5; ENST00000567118.5; ENST00000567087.5; ENST00000565184.5; ENST00000565154.5
External Link RMBase: RNA-editing_site_44983
5-methylcytidine (m5C)
In total 9 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000475 Click to Show/Hide the Full List
mod site chr15:72199594-72199595:- [8]
Sequence ACCCCCTTCCCCCAGCCCATCCATTAGGCCAGCAACGCTTG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000564440.5; ENST00000335181.10; ENST00000449901.6; ENST00000565154.5; ENST00000565184.5; ENST00000389093.7; ENST00000319622.10; ENST00000565143.1; ENST00000567118.5; ENST00000568883.5
External Link RMBase: m5C_site_14290
mod ID: M5CSITE000476 Click to Show/Hide the Full List
mod site chr15:72202624-72202625:- [8]
Sequence CTCTGGACGGATGTTGCTCCCCTAGATTGCCCGTGAGGCAG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000567118.5; ENST00000335181.10; ENST00000568459.5; ENST00000564440.5; ENST00000565184.5; ENST00000569857.5; ENST00000568883.5; ENST00000389093.7; ENST00000319622.10; ENST00000561609.5; ENST00000449901.6; ENST00000563986.1; ENST00000565154.5
External Link RMBase: m5C_site_14291
mod ID: M5CSITE000477 Click to Show/Hide the Full List
mod site chr15:72202626-72202627:- [8]
Sequence CCCTCTGGACGGATGTTGCTCCCCTAGATTGCCCGTGAGGC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000569857.5; ENST00000564440.5; ENST00000565154.5; ENST00000567118.5; ENST00000335181.10; ENST00000389093.7; ENST00000449901.6; ENST00000319622.10; ENST00000568459.5; ENST00000561609.5; ENST00000563986.1; ENST00000565184.5; ENST00000568883.5
External Link RMBase: m5C_site_14292
mod ID: M5CSITE000478 Click to Show/Hide the Full List
mod site chr15:72204236-72204237:-
Sequence ACACTGGCCAACAGTTCCTTCCATTAACTGTTCACTGCTTT
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000570166.1; ENST00000568459.5; ENST00000563986.1; ENST00000449901.6; ENST00000389093.7; ENST00000565184.5; ENST00000561609.5; ENST00000564440.5; ENST00000319622.10; ENST00000565154.5; ENST00000335181.10; ENST00000569857.5; ENST00000567118.5; ENST00000568883.5
External Link RMBase: m5C_site_14293
mod ID: M5CSITE000479 Click to Show/Hide the Full List
mod site chr15:72206131-72206132:- [8]
Sequence GCTGTGCCATTGGGGTACAGCTGCTGCTCTTACTCTAGACC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000319622.10; ENST00000389093.7; ENST00000565184.5; ENST00000335181.10; ENST00000567118.5; ENST00000561609.5; ENST00000449901.6; ENST00000568459.5; ENST00000563986.1; ENST00000570166.1; ENST00000569857.5; ENST00000568883.5; ENST00000565154.5
External Link RMBase: m5C_site_14294
mod ID: M5CSITE000480 Click to Show/Hide the Full List
mod site chr15:72206886-72206887:- [8]
Sequence TCTCACTAATGCTCTGTCCCCTCCCAGATGCTGGAGAGCAT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000319622.10; ENST00000389093.7; ENST00000568883.5; ENST00000561609.5; ENST00000335181.10; ENST00000564993.1; ENST00000563275.1; ENST00000569857.5; ENST00000449901.6; ENST00000565184.5; ENST00000565154.5; ENST00000568459.5; ENST00000567118.5
External Link RMBase: m5C_site_14295
mod ID: M5CSITE000481 Click to Show/Hide the Full List
mod site chr15:72209862-72209863:- [8]
Sequence TCTTGCTTACTCTCTTGTCCCTAGAGCGGCACTGCAGAGGT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000562997.5; ENST00000568743.1; ENST00000319622.10; ENST00000564178.5; ENST00000565154.5; ENST00000562784.1; ENST00000449901.6; ENST00000335181.10; ENST00000565184.5; ENST00000567118.5; ENST00000568883.5; ENST00000569857.5; ENST00000561609.5; ENST00000389093.7; ENST00000568459.5; ENST00000567087.5
External Link RMBase: m5C_site_14296
mod ID: M5CSITE000482 Click to Show/Hide the Full List
mod site chr15:72219113-72219114:- [8]
Sequence CTCTTTCAATTTGTCTCGACCCAGGACCTCAGCAGCCATGT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000564178.5; ENST00000335181.10; ENST00000567118.5; ENST00000567087.5; ENST00000561609.5; ENST00000568459.5; ENST00000565154.5; ENST00000389093.7; ENST00000566809.1; ENST00000449901.6; ENST00000569050.1; ENST00000565184.5; ENST00000562997.5; ENST00000569857.5; ENST00000319622.10; ENST00000568883.5; ENST00000564276.1
External Link RMBase: m5C_site_14297
mod ID: M5CSITE000483 Click to Show/Hide the Full List
mod site chr15:72219117-72219118:- [8]
Sequence CACTCTCTTTCAATTTGTCTCGACCCAGGACCTCAGCAGCC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000335181.10; ENST00000566809.1; ENST00000568459.5; ENST00000449901.6; ENST00000565154.5; ENST00000561609.5; ENST00000565184.5; ENST00000567087.5; ENST00000567118.5; ENST00000568883.5; ENST00000564178.5; ENST00000569857.5; ENST00000562997.5; ENST00000569050.1; ENST00000319622.10; ENST00000564276.1; ENST00000389093.7
External Link RMBase: m5C_site_14298
N6-methyladenosine (m6A)
In total 62 m6A sequence/site(s) in this target gene
mod ID: M6ASITE024058 Click to Show/Hide the Full List
mod site chr15:72199044-72199045:- [9]
Sequence GCCTACCTGTATGTCAATAAACAACAGCTGAAGCACCTGTT
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; HepG2; H1299; Huh7; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000568883.5; ENST00000565143.1; ENST00000565184.5; ENST00000389093.7; ENST00000335181.10; ENST00000319622.10; ENST00000564440.5; ENST00000449901.6
External Link RMBase: m6A_site_286174
mod ID: M6ASITE024059 Click to Show/Hide the Full List
mod site chr15:72199095-72199096:- [10]
Sequence ACCTTCCATTTTCCCCCACTACTGCAGCACCTCCAGGCCTG
Motif Score 2.500660714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000565184.5; ENST00000565143.1; ENST00000335181.10; ENST00000564440.5; ENST00000568883.5; ENST00000449901.6; ENST00000389093.7; ENST00000319622.10
External Link RMBase: m6A_site_286175
mod ID: M6ASITE024060 Click to Show/Hide the Full List
mod site chr15:72199098-72199099:- [10]
Sequence TCCACCTTCCATTTTCCCCCACTACTGCAGCACCTCCAGGC
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000565143.1; ENST00000449901.6; ENST00000564440.5; ENST00000319622.10; ENST00000389093.7; ENST00000565184.5; ENST00000335181.10; ENST00000568883.5
External Link RMBase: m6A_site_286176
mod ID: M6ASITE024061 Click to Show/Hide the Full List
mod site chr15:72199129-72199130:- [9]
Sequence ACTCAGCTGTCCTGCAGCAAACACTCCACCCTCCACCTTCC
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; HepG2; A549; H1299; Huh7; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000319622.10; ENST00000335181.10; ENST00000564440.5; ENST00000567118.5; ENST00000568883.5; ENST00000389093.7; ENST00000565184.5; ENST00000565143.1; ENST00000449901.6
External Link RMBase: m6A_site_286177
mod ID: M6ASITE024062 Click to Show/Hide the Full List
mod site chr15:72199221-72199222:- [10]
Sequence CTGTTGTTCCATTGAAGCCGACTCTGGCCCTGGCCCTTACT
Motif Score 3.287565476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000335181.10; ENST00000389093.7; ENST00000565143.1; ENST00000567118.5; ENST00000564440.5; ENST00000565184.5; ENST00000568883.5; ENST00000319622.10; ENST00000449901.6
External Link RMBase: m6A_site_286178
mod ID: M6ASITE024063 Click to Show/Hide the Full List
mod site chr15:72199277-72199278:- [9]
Sequence CCCTGGCTTGGGGTCAAGAAACAGCCAGCAAGAGTTAGGGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; liver; H1A; H1B; A549; H1299; MM6; Huh7; peripheral-blood; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq
Transcript ID List ENST00000567118.5; ENST00000319622.10; ENST00000564440.5; ENST00000449901.6; ENST00000335181.10; ENST00000389093.7; ENST00000568883.5; ENST00000565184.5; ENST00000565143.1
External Link RMBase: m6A_site_286179
mod ID: M6ASITE024064 Click to Show/Hide the Full List
mod site chr15:72199305-72199306:- [9]
Sequence AAAAAATGGATGCCCAGAGGACTCCCAACCCTGGCTTGGGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; A549; H1299; MM6; Huh7; peripheral-blood; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000335181.10; ENST00000564440.5; ENST00000565143.1; ENST00000568883.5; ENST00000449901.6; ENST00000319622.10; ENST00000565184.5; ENST00000567118.5; ENST00000389093.7
External Link RMBase: m6A_site_286180
mod ID: M6ASITE024065 Click to Show/Hide the Full List
mod site chr15:72199345-72199346:- [10]
Sequence CAGCTTCCTTTCCTGTGTGTACTCTGTCCAGTTCCTTTAGA
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000449901.6; ENST00000565184.5; ENST00000568883.5; ENST00000335181.10; ENST00000319622.10; ENST00000564440.5; ENST00000389093.7; ENST00000565143.1; ENST00000567118.5
External Link RMBase: m6A_site_286181
mod ID: M6ASITE024066 Click to Show/Hide the Full List
mod site chr15:72199366-72199367:- [11]
Sequence AGCCAGATGGCAAGAGGGTGACAGCTTCCTTTCCTGTGTGT
Motif Score 2.859755952
Cell/Tissue List liver; HEK293T
Seq Type List m6A-REF-seq; DART-seq
Transcript ID List ENST00000389093.7; ENST00000565143.1; ENST00000564440.5; ENST00000568883.5; ENST00000319622.10; ENST00000449901.6; ENST00000567118.5; ENST00000565184.5; ENST00000335181.10
External Link RMBase: m6A_site_286182
mod ID: M6ASITE024067 Click to Show/Hide the Full List
mod site chr15:72199401-72199402:- [9]
Sequence GGAAGAAGGAGGAATGCTGGACTGGAGGCCCCTGGAGCCAG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; A549; H1299; MM6; peripheral-blood; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000319622.10; ENST00000389093.7; ENST00000449901.6; ENST00000564440.5; ENST00000567118.5; ENST00000565143.1; ENST00000565184.5; ENST00000568883.5; ENST00000335181.10
External Link RMBase: m6A_site_286183
mod ID: M6ASITE024068 Click to Show/Hide the Full List
mod site chr15:72199467-72199468:- [9]
Sequence TTGCAGCCTGCTCTAGTGGGACAGCCCAGAGCCTGGCTGCC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; H1A; H1B; A549; H1299; MM6; Huh7; peripheral-blood; TREX; endometrial; HEC-1-A; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000568883.5; ENST00000319622.10; ENST00000389093.7; ENST00000565184.5; ENST00000567118.5; ENST00000449901.6; ENST00000565143.1; ENST00000564440.5; ENST00000335181.10
External Link RMBase: m6A_site_286184
mod ID: M6ASITE024069 Click to Show/Hide the Full List
mod site chr15:72199499-72199500:- [9]
Sequence AAGATCAACGCCTCACTGAAACATGGCTGTGTTTGCAGCCT
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; H1A; H1B; A549; H1299; MM6; Huh7; peripheral-blood; TREX; endometrial; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; miCLIP
Transcript ID List ENST00000564440.5; ENST00000565143.1; ENST00000389093.7; ENST00000319622.10; ENST00000568883.5; ENST00000335181.10; ENST00000449901.6; ENST00000567118.5; ENST00000565184.5
External Link RMBase: m6A_site_286185
mod ID: M6ASITE024070 Click to Show/Hide the Full List
mod site chr15:72199531-72199532:- [9]
Sequence CGTGGCACTGGTAGGTTGGGACACCAGGGAAGAAGATCAAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; H1A; H1B; A549; H1299; MM6; Huh7; peripheral-blood; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000449901.6; ENST00000567118.5; ENST00000568883.5; ENST00000389093.7; ENST00000564440.5; ENST00000319622.10; ENST00000565143.1; ENST00000565184.5; ENST00000335181.10
External Link RMBase: m6A_site_286186
mod ID: M6ASITE024071 Click to Show/Hide the Full List
mod site chr15:72199552-72199553:- [12]
Sequence AGAACTCACTCTGGGCTGTAACGTGGCACTGGTAGGTTGGG
Motif Score 2.142029762
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000449901.6; ENST00000335181.10; ENST00000319622.10; ENST00000389093.7; ENST00000567118.5; ENST00000565143.1; ENST00000564440.5; ENST00000568883.5; ENST00000565184.5
External Link RMBase: m6A_site_286187
mod ID: M6ASITE024072 Click to Show/Hide the Full List
mod site chr15:72199565-72199566:- [10]
Sequence CAGCAACGCTTGTAGAACTCACTCTGGGCTGTAACGTGGCA
Motif Score 2.469291667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000389093.7; ENST00000567118.5; ENST00000565184.5; ENST00000319622.10; ENST00000449901.6; ENST00000335181.10; ENST00000568883.5; ENST00000564440.5; ENST00000565143.1
External Link RMBase: m6A_site_286188
mod ID: M6ASITE024073 Click to Show/Hide the Full List
mod site chr15:72199569-72199570:- [9]
Sequence AGGCCAGCAACGCTTGTAGAACTCACTCTGGGCTGTAACGT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; CD8T; A549; H1299; MM6; Huh7; peripheral-blood; TREX; endometrial; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000335181.10; ENST00000449901.6; ENST00000565143.1; ENST00000567118.5; ENST00000319622.10; ENST00000568883.5; ENST00000389093.7; ENST00000564440.5; ENST00000565184.5
External Link RMBase: m6A_site_286189
mod ID: M6ASITE024074 Click to Show/Hide the Full List
mod site chr15:72199580-72199581:- [12]
Sequence GCCCATCCATTAGGCCAGCAACGCTTGTAGAACTCACTCTG
Motif Score 2.147845238
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000449901.6; ENST00000319622.10; ENST00000568883.5; ENST00000564440.5; ENST00000565184.5; ENST00000389093.7; ENST00000567118.5; ENST00000335181.10; ENST00000565143.1
External Link RMBase: m6A_site_286190
mod ID: M6ASITE024075 Click to Show/Hide the Full List
mod site chr15:72199645-72199646:- [13]
Sequence TTGTTCCTGTGCCGTGATGGACCCCAGAGCCCCTCCTCCAG
Motif Score 3.622404762
Cell/Tissue List HepG2; A549; MM6; Huh7; peripheral-blood; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000568883.5; ENST00000565154.5; ENST00000389093.7; ENST00000567118.5; ENST00000565143.1; ENST00000564440.5; ENST00000568459.5; ENST00000565184.5; ENST00000319622.10; ENST00000449901.6; ENST00000335181.10
External Link RMBase: m6A_site_286191
mod ID: M6ASITE024076 Click to Show/Hide the Full List
mod site chr15:72199677-72199678:- [14]
Sequence CCCTGGCTCCGGCTTCACCAACACCATGCGTGTTGTTCCTG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000565184.5; ENST00000335181.10; ENST00000565143.1; ENST00000564440.5; ENST00000568883.5; ENST00000319622.10; ENST00000568459.5; ENST00000389093.7; ENST00000565154.5; ENST00000449901.6; ENST00000567118.5
External Link RMBase: m6A_site_286192
mod ID: M6ASITE024077 Click to Show/Hide the Full List
mod site chr15:72200490-72200491:- [15]
Sequence GGACGTGGACCTCCGGGTGAACTTTGCCATGAATGTTGGTA
Motif Score 3.373380952
Cell/Tissue List CD34; HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000335181.10; ENST00000568883.5; ENST00000567118.5; ENST00000565154.5; ENST00000319622.10; ENST00000389093.7; ENST00000565143.1; ENST00000568459.5; ENST00000565184.5; ENST00000564440.5; ENST00000449901.6
External Link RMBase: m6A_site_286193
mod ID: M6ASITE024078 Click to Show/Hide the Full List
mod site chr15:72200502-72200503:- [13]
Sequence GGCCTGGGCTGAGGACGTGGACCTCCGGGTGAACTTTGCCA
Motif Score 3.622404762
Cell/Tissue List HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000389093.7; ENST00000564440.5; ENST00000565154.5; ENST00000568883.5; ENST00000565184.5; ENST00000568459.5; ENST00000335181.10; ENST00000567118.5; ENST00000565143.1; ENST00000319622.10; ENST00000449901.6
External Link RMBase: m6A_site_286194
mod ID: M6ASITE024079 Click to Show/Hide the Full List
mod site chr15:72200535-72200536:- [13]
Sequence CTTCCCTGTGCTGTGCAAGGACCCAGTCCAGGAGGCCTGGG
Motif Score 3.622404762
Cell/Tissue List HepG2; MT4; peripheral-blood
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000568459.5; ENST00000335181.10; ENST00000449901.6; ENST00000565143.1; ENST00000565184.5; ENST00000565154.5; ENST00000567118.5; ENST00000389093.7; ENST00000564440.5; ENST00000561609.5; ENST00000319622.10; ENST00000568883.5
External Link RMBase: m6A_site_286195
mod ID: M6ASITE024080 Click to Show/Hide the Full List
mod site chr15:72200587-72200588:- [13]
Sequence CTGTGACCCGGAATCCCCAGACAGCTCGTCAGGCCCACCTG
Motif Score 2.897386905
Cell/Tissue List HepG2; MT4; peripheral-blood
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000449901.6; ENST00000565184.5; ENST00000335181.10; ENST00000568883.5; ENST00000568459.5; ENST00000561609.5; ENST00000564440.5; ENST00000319622.10; ENST00000389093.7; ENST00000565154.5; ENST00000567118.5; ENST00000565143.1
External Link RMBase: m6A_site_286196
mod ID: M6ASITE024081 Click to Show/Hide the Full List
mod site chr15:72201409-72201410:- [9]
Sequence GCCCCTCCCCAGCTCCTGAGACACAGCTGCAGCTACAAGTG
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000561609.5; ENST00000449901.6; ENST00000568883.5; ENST00000564440.5; ENST00000389093.7; ENST00000335181.10; ENST00000565143.1; ENST00000567118.5; ENST00000565154.5; ENST00000319622.10; ENST00000565184.5; ENST00000568459.5
External Link RMBase: m6A_site_286197
mod ID: M6ASITE024082 Click to Show/Hide the Full List
mod site chr15:72202184-72202185:- [10]
Sequence ACATAACAGTGCACAGGCTGACTACAAATGGTTATTTGATA
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000565184.5; ENST00000561609.5; ENST00000563986.1; ENST00000567118.5; ENST00000568459.5; ENST00000319622.10; ENST00000564440.5; ENST00000449901.6; ENST00000565154.5; ENST00000389093.7; ENST00000335181.10; ENST00000568883.5
External Link RMBase: m6A_site_286198
mod ID: M6ASITE024083 Click to Show/Hide the Full List
mod site chr15:72202569-72202570:- [9]
Sequence CACTTGCAATTATTTGAGGAACTCCGCCGCCTGGCGCCCAT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000561609.5; ENST00000568459.5; ENST00000565154.5; ENST00000335181.10; ENST00000567118.5; ENST00000568883.5; ENST00000389093.7; ENST00000563986.1; ENST00000565184.5; ENST00000319622.10; ENST00000449901.6; ENST00000569857.5; ENST00000564440.5
External Link RMBase: m6A_site_286199
mod ID: M6ASITE024084 Click to Show/Hide the Full List
mod site chr15:72202732-72202733:- [9]
Sequence CTTGGCCTTTGTTCCCAGGAACATGTTCCTCACCAGCTGTC
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000568459.5; ENST00000335181.10; ENST00000319622.10; ENST00000389093.7; ENST00000564440.5; ENST00000570166.1; ENST00000569857.5; ENST00000568883.5; ENST00000563986.1; ENST00000561609.5; ENST00000565154.5; ENST00000449901.6; ENST00000565184.5; ENST00000567118.5
External Link RMBase: m6A_site_286200
mod ID: M6ASITE024085 Click to Show/Hide the Full List
mod site chr15:72203112-72203113:- [11]
Sequence TGCGAGCCTCAAGTCACTCCACAGACCTCATGGAAGCCATG
Motif Score 2.053113095
Cell/Tissue List brain; HEK293
Seq Type List m6A-REF-seq
Transcript ID List ENST00000563986.1; ENST00000319622.10; ENST00000565154.5; ENST00000389093.7; ENST00000449901.6; ENST00000570166.1; ENST00000567118.5; ENST00000335181.10; ENST00000568459.5; ENST00000564440.5; ENST00000565184.5; ENST00000561609.5; ENST00000569857.5; ENST00000568883.5
External Link RMBase: m6A_site_286201
mod ID: M6ASITE024086 Click to Show/Hide the Full List
mod site chr15:72203320-72203321:- [9]
Sequence CCTCTGCATCTGCCTGAAGGACAGATTTAGCCAATTAACCT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000389093.7; ENST00000563986.1; ENST00000561609.5; ENST00000568459.5; ENST00000564440.5; ENST00000570166.1; ENST00000567118.5; ENST00000335181.10; ENST00000449901.6; ENST00000565154.5; ENST00000568883.5; ENST00000565184.5; ENST00000569857.5; ENST00000319622.10
External Link RMBase: m6A_site_286202
mod ID: M6ASITE024087 Click to Show/Hide the Full List
mod site chr15:72203355-72203356:- [9]
Sequence GCACCTCCTGAAGCAGTTGGACTTTCATCACCCTACCTCTG
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000563986.1; ENST00000449901.6; ENST00000570166.1; ENST00000561609.5; ENST00000567118.5; ENST00000319622.10; ENST00000569857.5; ENST00000565154.5; ENST00000389093.7; ENST00000565184.5; ENST00000335181.10; ENST00000568883.5; ENST00000568459.5; ENST00000564440.5
External Link RMBase: m6A_site_286203
mod ID: M6ASITE024088 Click to Show/Hide the Full List
mod site chr15:72206761-72206762:- [9]
Sequence TGGAGAAACAGCCAAAGGGGACTATCCTCTGGAGGCTGTGC
Motif Score 4.065041667
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000570166.1; ENST00000564993.1; ENST00000389093.7; ENST00000569857.5; ENST00000565184.5; ENST00000567118.5; ENST00000565154.5; ENST00000568883.5; ENST00000568459.5; ENST00000561609.5; ENST00000335181.10; ENST00000563986.1; ENST00000563275.1; ENST00000319622.10; ENST00000449901.6
External Link RMBase: m6A_site_286204
mod ID: M6ASITE024089 Click to Show/Hide the Full List
mod site chr15:72206774-72206775:- [9]
Sequence GCATCATGCTGTCTGGAGAAACAGCCAAAGGGGACTATCCT
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; HepG2; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000565184.5; ENST00000568883.5; ENST00000568459.5; ENST00000563275.1; ENST00000319622.10; ENST00000570166.1; ENST00000449901.6; ENST00000567118.5; ENST00000564993.1; ENST00000561609.5; ENST00000335181.10; ENST00000389093.7; ENST00000569857.5; ENST00000565154.5; ENST00000563986.1
External Link RMBase: m6A_site_286205
mod ID: M6ASITE024090 Click to Show/Hide the Full List
mod site chr15:72208665-72208666:- [9]
Sequence CCTGGGAGAGAAGGGAAAGAACATCAAGATTATCAGCAAAA
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; peripheral-blood; endometrial; NB4; MM6
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000568883.5; ENST00000568459.5; ENST00000449901.6; ENST00000565154.5; ENST00000561609.5; ENST00000569857.5; ENST00000567118.5; ENST00000389093.7; ENST00000319622.10; ENST00000565184.5; ENST00000335181.10; ENST00000568743.1; ENST00000563275.1
External Link RMBase: m6A_site_286206
mod ID: M6ASITE024091 Click to Show/Hide the Full List
mod site chr15:72208782-72208783:- [9]
Sequence GCCTGCTGTGTCGGAGAAGGACATCCAGGATCTGAAGTTTG
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; peripheral-blood; endometrial; NB4; MM6
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000568883.5; ENST00000319622.10; ENST00000335181.10; ENST00000563275.1; ENST00000569857.5; ENST00000567118.5; ENST00000565154.5; ENST00000568743.1; ENST00000568459.5; ENST00000449901.6; ENST00000561609.5; ENST00000565184.5; ENST00000389093.7
External Link RMBase: m6A_site_286207
mod ID: M6ASITE024092 Click to Show/Hide the Full List
mod site chr15:72208806-72208807:- [9]
Sequence CCTTCCTGGGGCTGCTGTGGACTTGCCTGCTGTGTCGGAGA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial; NB4; MM6; AML
Seq Type List m6A-seq; miCLIP
Transcript ID List ENST00000568459.5; ENST00000565154.5; ENST00000449901.6; ENST00000565184.5; ENST00000563275.1; ENST00000561609.5; ENST00000335181.10; ENST00000569857.5; ENST00000568883.5; ENST00000319622.10; ENST00000567118.5; ENST00000568743.1; ENST00000389093.7
External Link RMBase: m6A_site_286208
mod ID: M6ASITE024093 Click to Show/Hide the Full List
mod site chr15:72208827-72208828:- [9]
Sequence GGGCAGCAAGAAGGGTGTGAACCTTCCTGGGGCTGCTGTGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000563275.1; ENST00000567118.5; ENST00000568883.5; ENST00000389093.7; ENST00000335181.10; ENST00000565154.5; ENST00000568743.1; ENST00000319622.10; ENST00000568459.5; ENST00000565184.5; ENST00000561609.5; ENST00000569857.5; ENST00000449901.6
External Link RMBase: m6A_site_286209
mod ID: M6ASITE024094 Click to Show/Hide the Full List
mod site chr15:72209620-72209621:- [9]
Sequence AAACAGTCTTTTGTCTCTAAACTTCCTTGACACAAGGAAGA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000389093.7; ENST00000569857.5; ENST00000565184.5; ENST00000335181.10; ENST00000449901.6; ENST00000319622.10; ENST00000568743.1; ENST00000565154.5; ENST00000567118.5; ENST00000568459.5; ENST00000568883.5; ENST00000562784.1; ENST00000561609.5
External Link RMBase: m6A_site_286210
mod ID: M6ASITE024095 Click to Show/Hide the Full List
mod site chr15:72209638-72209639:- [9]
Sequence CTGGAGTCCAGTTGTCTAAAACAGTCTTTTGTCTCTAAACT
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; peripheral-blood; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000567118.5; ENST00000569857.5; ENST00000568743.1; ENST00000449901.6; ENST00000568459.5; ENST00000335181.10; ENST00000389093.7; ENST00000565154.5; ENST00000561609.5; ENST00000565184.5; ENST00000568883.5; ENST00000319622.10; ENST00000562784.1
External Link RMBase: m6A_site_286211
mod ID: M6ASITE024096 Click to Show/Hide the Full List
mod site chr15:72209749-72209750:- [9]
Sequence CCTGTGGCTGGACTACAAGAACATCTGCAAGGTGGTGGAAG
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; peripheral-blood; endometrial; NB4; MM6
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000389093.7; ENST00000568459.5; ENST00000335181.10; ENST00000568743.1; ENST00000567118.5; ENST00000319622.10; ENST00000562784.1; ENST00000565184.5; ENST00000561609.5; ENST00000449901.6; ENST00000569857.5; ENST00000565154.5; ENST00000568883.5; ENST00000564178.5
External Link RMBase: m6A_site_286212
mod ID: M6ASITE024097 Click to Show/Hide the Full List
mod site chr15:72209758-72209759:- [9]
Sequence CGAGAACATCCTGTGGCTGGACTACAAGAACATCTGCAAGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000568743.1; ENST00000335181.10; ENST00000449901.6; ENST00000319622.10; ENST00000568459.5; ENST00000561609.5; ENST00000562784.1; ENST00000567118.5; ENST00000565184.5; ENST00000565154.5; ENST00000564178.5; ENST00000568883.5; ENST00000562997.5; ENST00000569857.5; ENST00000389093.7
External Link RMBase: m6A_site_286213
mod ID: M6ASITE024098 Click to Show/Hide the Full List
mod site chr15:72209773-72209774:- [9]
Sequence CATGGAAAAGTGTGACGAGAACATCCTGTGGCTGGACTACA
Motif Score 2.951386905
Cell/Tissue List HeLa; kidney; liver; HepG2; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq; m6A-REF-seq
Transcript ID List ENST00000568743.1; ENST00000565184.5; ENST00000568459.5; ENST00000562784.1; ENST00000568883.5; ENST00000561609.5; ENST00000319622.10; ENST00000567118.5; ENST00000449901.6; ENST00000564178.5; ENST00000335181.10; ENST00000389093.7; ENST00000569857.5; ENST00000562997.5; ENST00000565154.5
External Link RMBase: m6A_site_286214
mod ID: M6ASITE024099 Click to Show/Hide the Full List
mod site chr15:72209794-72209795:- [11]
Sequence AATCACGCTGGATAACGCCTACATGGAAAAGTGTGACGAGA
Motif Score 2.078666667
Cell/Tissue List kidney; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000389093.7; ENST00000562784.1; ENST00000561609.5; ENST00000568883.5; ENST00000569857.5; ENST00000335181.10; ENST00000562997.5; ENST00000567118.5; ENST00000567087.5; ENST00000319622.10; ENST00000568459.5; ENST00000564178.5; ENST00000565154.5; ENST00000568743.1; ENST00000449901.6; ENST00000565184.5
External Link RMBase: m6A_site_286215
mod ID: M6ASITE024100 Click to Show/Hide the Full List
mod site chr15:72209884-72209885:- [9]
Sequence TACTGGTGTCTCCAGTTTGGACTCTTGCTTACTCTCTTGTC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000562784.1; ENST00000568883.5; ENST00000567087.5; ENST00000567118.5; ENST00000568459.5; ENST00000449901.6; ENST00000564178.5; ENST00000561609.5; ENST00000565184.5; ENST00000335181.10; ENST00000319622.10; ENST00000565154.5; ENST00000568743.1; ENST00000389093.7; ENST00000569857.5; ENST00000562997.5
External Link RMBase: m6A_site_286216
mod ID: M6ASITE024101 Click to Show/Hide the Full List
mod site chr15:72209983-72209984:- [9]
Sequence TTAGAGAATAAGAGCAAAAAACTGTATTACTTTTAGCAGTG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000561609.5; ENST00000565184.5; ENST00000567087.5; ENST00000449901.6; ENST00000335181.10; ENST00000568883.5; ENST00000319622.10; ENST00000389093.7; ENST00000564178.5; ENST00000568459.5; ENST00000562784.1; ENST00000562997.5; ENST00000567118.5; ENST00000569857.5; ENST00000565154.5; ENST00000568743.1
External Link RMBase: m6A_site_286217
mod ID: M6ASITE024102 Click to Show/Hide the Full List
mod site chr15:72210291-72210292:- [16]
Sequence GTAGGCAATATGCCCCAGAGACATGTCCTCCAAAGCGCTGG
Motif Score 2.897386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000568459.5; ENST00000319622.10; ENST00000562997.5; ENST00000561609.5; ENST00000564276.1; ENST00000562784.1; ENST00000389093.7; ENST00000565154.5; ENST00000564178.5; ENST00000567087.5; ENST00000568883.5; ENST00000569857.5; ENST00000335181.10; ENST00000449901.6; ENST00000565184.5; ENST00000567118.5
External Link RMBase: m6A_site_286218
mod ID: M6ASITE024103 Click to Show/Hide the Full List
mod site chr15:72210363-72210364:- [9]
Sequence CTAAAGGACCTGAGATCCGAACTGGGCTCATCAAGGGCGTG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000564276.1; ENST00000567118.5; ENST00000564178.5; ENST00000568459.5; ENST00000561609.5; ENST00000562784.1; ENST00000449901.6; ENST00000335181.10; ENST00000562997.5; ENST00000568883.5; ENST00000319622.10; ENST00000569857.5; ENST00000565154.5; ENST00000565184.5; ENST00000389093.7; ENST00000567087.5
External Link RMBase: m6A_site_286219
mod ID: M6ASITE024104 Click to Show/Hide the Full List
mod site chr15:72210376-72210377:- [9]
Sequence GTGGCTCTAGACACTAAAGGACCTGAGATCCGAACTGGGCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000568459.5; ENST00000564178.5; ENST00000565154.5; ENST00000564276.1; ENST00000569857.5; ENST00000389093.7; ENST00000449901.6; ENST00000561609.5; ENST00000565184.5; ENST00000335181.10; ENST00000567118.5; ENST00000568883.5; ENST00000562784.1; ENST00000319622.10; ENST00000567087.5; ENST00000562997.5
External Link RMBase: m6A_site_286220
mod ID: M6ASITE024105 Click to Show/Hide the Full List
mod site chr15:72210386-72210387:- [9]
Sequence GCCCGTTGCTGTGGCTCTAGACACTAAAGGACCTGAGATCC
Motif Score 2.897386905
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000562997.5; ENST00000389093.7; ENST00000562784.1; ENST00000449901.6; ENST00000564276.1; ENST00000565154.5; ENST00000569857.5; ENST00000568459.5; ENST00000565184.5; ENST00000567087.5; ENST00000568883.5; ENST00000561609.5; ENST00000319622.10; ENST00000567118.5; ENST00000335181.10; ENST00000564178.5
External Link RMBase: m6A_site_286221
mod ID: M6ASITE024106 Click to Show/Hide the Full List
mod site chr15:72210465-72210466:- [9]
Sequence TCCCCCAGTACCATGCGGAGACCATCAAGAATGTGCGCACA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial; AML
Seq Type List m6A-seq; miCLIP
Transcript ID List ENST00000449901.6; ENST00000569857.5; ENST00000335181.10; ENST00000389093.7; ENST00000319622.10; ENST00000568883.5; ENST00000564178.5; ENST00000562997.5; ENST00000564276.1; ENST00000567118.5; ENST00000565184.5; ENST00000567087.5; ENST00000565154.5; ENST00000562784.1; ENST00000561609.5; ENST00000568459.5
External Link RMBase: m6A_site_286222
mod ID: M6ASITE024107 Click to Show/Hide the Full List
mod site chr15:72217416-72217417:- [9]
Sequence GTCTGAACTTCTCTCATGGAACTCATGAGGTGAGCTGTGGC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000566809.1; ENST00000562784.1; ENST00000567087.5; ENST00000319622.10; ENST00000561609.5; ENST00000335181.10; ENST00000564178.5; ENST00000569857.5; ENST00000565154.5; ENST00000568883.5; ENST00000564276.1; ENST00000389093.7; ENST00000449901.6; ENST00000568459.5; ENST00000567118.5; ENST00000562997.5; ENST00000565184.5
External Link RMBase: m6A_site_286223
mod ID: M6ASITE024108 Click to Show/Hide the Full List
mod site chr15:72217430-72217431:- [9]
Sequence AATGAATGTGGCTCGTCTGAACTTCTCTCATGGAACTCATG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; peripheral-blood; endometrial; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000567087.5; ENST00000567118.5; ENST00000565154.5; ENST00000565184.5; ENST00000449901.6; ENST00000561609.5; ENST00000562997.5; ENST00000335181.10; ENST00000562784.1; ENST00000389093.7; ENST00000568883.5; ENST00000569857.5; ENST00000564178.5; ENST00000566809.1; ENST00000564276.1; ENST00000319622.10; ENST00000568459.5
External Link RMBase: m6A_site_286224
mod ID: M6ASITE024109 Click to Show/Hide the Full List
mod site chr15:72218966-72218967:- [9]
Sequence ACCACCCATCACAGCCCGGAACACTGGCATCATCTGTACCA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; MT4; CD4T; peripheral-blood; endometrial; MM6; AML
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000568459.5; ENST00000567118.5; ENST00000319622.10; ENST00000389093.7; ENST00000565154.5; ENST00000564276.1; ENST00000449901.6; ENST00000562997.5; ENST00000566809.1; ENST00000567087.5; ENST00000335181.10; ENST00000565184.5; ENST00000561609.5; ENST00000569050.1; ENST00000569857.5; ENST00000564178.5; ENST00000568883.5
External Link RMBase: m6A_site_286225
mod ID: M6ASITE024110 Click to Show/Hide the Full List
mod site chr15:72218996-72218997:- [9]
Sequence GGAGCACATGTGCCGCCTGGACATTGATTCACCACCCATCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; MT4; CD4T; peripheral-blood; HEK293T; endometrial; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000319622.10; ENST00000335181.10; ENST00000569857.5; ENST00000567118.5; ENST00000564178.5; ENST00000449901.6; ENST00000565154.5; ENST00000564276.1; ENST00000568459.5; ENST00000566809.1; ENST00000389093.7; ENST00000567087.5; ENST00000569050.1; ENST00000562997.5; ENST00000561609.5; ENST00000565184.5; ENST00000568883.5
External Link RMBase: m6A_site_286226
mod ID: M6ASITE024111 Click to Show/Hide the Full List
mod site chr15:72219026-72219027:- [14]
Sequence GCTGCACGCAGCCATGGCTGACACATTCCTGGAGCACATGT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000568883.5; ENST00000567087.5; ENST00000569050.1; ENST00000319622.10; ENST00000564276.1; ENST00000567118.5; ENST00000569857.5; ENST00000568459.5; ENST00000565154.5; ENST00000335181.10; ENST00000561609.5; ENST00000562997.5; ENST00000449901.6; ENST00000565184.5; ENST00000389093.7; ENST00000564178.5; ENST00000566809.1
External Link RMBase: m6A_site_286227
mod ID: M6ASITE024112 Click to Show/Hide the Full List
mod site chr15:72219054-72219055:- [9]
Sequence CCGGGACTGCCTTCATTCAGACCCAGCAGCTGCACGCAGCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; MT4; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000564178.5; ENST00000565184.5; ENST00000389093.7; ENST00000335181.10; ENST00000561609.5; ENST00000568459.5; ENST00000564276.1; ENST00000569050.1; ENST00000562997.5; ENST00000569857.5; ENST00000567087.5; ENST00000319622.10; ENST00000565154.5; ENST00000566809.1; ENST00000449901.6; ENST00000567118.5; ENST00000568883.5
External Link RMBase: m6A_site_286228
mod ID: M6ASITE024113 Click to Show/Hide the Full List
mod site chr15:72219069-72219070:- [9]
Sequence AGCCCCATAGTGAAGCCGGGACTGCCTTCATTCAGACCCAG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; MT4; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000568883.5; ENST00000389093.7; ENST00000565184.5; ENST00000569050.1; ENST00000567118.5; ENST00000569857.5; ENST00000564276.1; ENST00000449901.6; ENST00000335181.10; ENST00000562997.5; ENST00000568459.5; ENST00000565154.5; ENST00000566809.1; ENST00000564178.5; ENST00000319622.10; ENST00000561609.5; ENST00000567087.5
External Link RMBase: m6A_site_286229
mod ID: M6ASITE024114 Click to Show/Hide the Full List
mod site chr15:72221173-72221174:- [9]
Sequence CGGAAGCCCAACCCCAGAGAACCAAAGGTATGACCTGATAT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; MT4; A549; MM6; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000564276.1; ENST00000568883.5; ENST00000567118.5; ENST00000568459.5; ENST00000389093.7; ENST00000335181.10; ENST00000562997.5; ENST00000569050.1; ENST00000566809.1; ENST00000565184.5; ENST00000565154.5; ENST00000449901.6; ENST00000319622.10; ENST00000561609.5; ENST00000569857.5; ENST00000567087.5
External Link RMBase: m6A_site_286230
mod ID: M6ASITE024115 Click to Show/Hide the Full List
mod site chr15:72231551-72231552:- [9]
Sequence GGGCCGAGAGCCAAGAAAAGACACCCCATCTGGCAGCCCAA
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; H1A; H1B; GM12878; HEK293A-TOA; iSLK; MSC; TREX; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000566809.1; ENST00000569050.1; ENST00000568883.5; ENST00000567087.5
External Link RMBase: m6A_site_286231
mod ID: M6ASITE024116 Click to Show/Hide the Full List
mod site chr15:72231587-72231588:- [9]
Sequence CCCTGCCCAGGTAGGCCGGGACAGCTGGGGTGGCCTGGGCC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; H1A; H1B; GM12878; HEK293A-TOA; iSLK; MSC; TREX; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000568883.5; ENST00000569050.1; ENST00000567087.5; ENST00000566809.1
External Link RMBase: m6A_site_286232
mod ID: M6ASITE024117 Click to Show/Hide the Full List
mod site chr15:72231622-72231623:- [9]
Sequence CGGGAGAATGCTGCCCCGGAACCCATAAATCTGGGCCCTGC
Motif Score 2.930744048
Cell/Tissue List HeLa; HEK293T; H1A; H1B; GM12878; HEK293A-TOA; iSLK; MSC; TREX; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000566809.1; ENST00000569050.1; ENST00000567087.5; ENST00000568883.5
External Link RMBase: m6A_site_286233
mod ID: M6ASITE024118 Click to Show/Hide the Full List
mod site chr15:72231676-72231677:- [9]
Sequence CCGAGGGTGCGCCAGAGCAGACACCCGGAGGAGTGGGGAGT
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; H1A; H1B; GM12878; MM6; CD4T; HEK293A-TOA; MSC; TIME; TREX; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000569050.1; ENST00000567087.5; ENST00000568883.5
External Link RMBase: m6A_site_286234
mod ID: M6ASITE024119 Click to Show/Hide the Full List
mod site chr15:72231752-72231753:- [9]
Sequence CCCCTCCGAAGGCGGCCAGGACCTCCAACCACGCACAAGTC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; HepG2; H1A; H1B; hNPCs; GM12878; MM6; CD4T; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000568883.5; ENST00000569050.1
External Link RMBase: m6A_site_286235
2'-O-Methylation (2'-O-Me)
In total 3 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000124 Click to Show/Hide the Full List
mod site chr15:72199333-72199334:- [17]
Sequence CTGTGTGTACTCTGTCCAGTTCCTTTAGAAAAAATGGATGC
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000389093.7; ENST00000319622.10; ENST00000568883.5; ENST00000565184.5; ENST00000449901.6; ENST00000564440.5; ENST00000567118.5; ENST00000335181.10; ENST00000565143.1
External Link RMBase: Nm_site_1966
mod ID: 2OMSITE000125 Click to Show/Hide the Full List
mod site chr15:72207129-72207130:- [17]
Sequence AAGCCTGTCATCTGTGCTACTCAGGCATGTGCCCACCCTTC
Cell/Tissue List HEK293
Seq Type List Nm-seq
Transcript ID List ENST00000567118.5; ENST00000563275.1; ENST00000389093.7; ENST00000564993.1; ENST00000335181.10; ENST00000569857.5; ENST00000561609.5; ENST00000568459.5; ENST00000449901.6; ENST00000565184.5; ENST00000319622.10; ENST00000565154.5; ENST00000568883.5
External Link RMBase: Nm_site_1967
mod ID: 2OMSITE000126 Click to Show/Hide the Full List
mod site chr15:72210477-72210478:- [17]
Sequence TCTTCCTTCTTTTCCCCCAGTACCATGCGGAGACCATCAAG
Cell/Tissue List HEK293; HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000389093.7; ENST00000568459.5; ENST00000567087.5; ENST00000564276.1; ENST00000565184.5; ENST00000564178.5; ENST00000568883.5; ENST00000567118.5; ENST00000561609.5; ENST00000562784.1; ENST00000449901.6; ENST00000335181.10; ENST00000565154.5; ENST00000319622.10; ENST00000569857.5; ENST00000562997.5
External Link RMBase: Nm_site_1968
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000064 Click to Show/Hide the Full List
mod site chr15:72200295-72200296:- [18]
Sequence GTTCATTCTGAATCTCTCATTCTCCGAAGTCCTAAGCTGAG
Transcript ID List ENST00000565184.5; ENST00000568883.5; ENST00000565154.5; ENST00000449901.6; ENST00000335181.10; ENST00000319622.10; ENST00000568459.5; ENST00000565143.1; ENST00000389093.7; ENST00000564440.5; ENST00000567118.5
External Link RMBase: Pseudo_site_1665