m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00094)
Target Name FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1)
Synonyms
FOXD2-AS1; FOXD2 antisense RNA 1 (non-protein coding); FOXD2 antisense RNA 1; FOXD2 antisense RNA 1 (head to head); MGC12982
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Gene Name FOXD2-AS1
Chromosomal Location 1p33
Gene ID 84793
HGNC ID
HGNC:44256
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
FOXD2-AS1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line ARPE-19 cell line Homo sapiens
Treatment: shMETTL3 ARPE-19 cells
Control: shControl ARPE-19 cells
 GSE202017
Regulation
logFC: 1.16E+00
p-value: 1.63E-05
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between FOXD2-AS1 and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 5.78E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3/FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1) accelerates cervical cancer progression via a m6A-dependent modality, which serves as a potential therapeutic target for cervical cancer.
Target Regulation Up regulation
Responsed Disease Cervical cancer ICD-11: 2C77
 Disease Info 
Cell Process Cell migration and proliferation
In-vitro Model C-33 A Cervical squamous cell carcinoma Homo sapiens CVCL_1094
Ca Ski Cervical squamous cell carcinoma Homo sapiens CVCL_1100
HaCaT Normal Homo sapiens CVCL_0038
HT-3 Cervical carcinoma Homo sapiens CVCL_1293
SiHa Cervical squamous cell carcinoma Homo sapiens CVCL_0032
In-vivo Model A total 5 × 106 stably transfected SiHa cells were subcutaneously injected into the flank of nude mice.
Wilms tumor 1-associating protein (WTAP) [WRITER]
 Regulator Info 
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [2]
Response Summary A remarkable m6A-modified site was found on the 3'-UTR of FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1), and m6A methyltransferase WTAP promoted the methylation modification, thus enhancing the stability of FOXD2-AS1 transcripts. m6A-modified FOXD2-AS1 accelerates the osteosarcoma progression through m6A manner, which provides new concepts for osteosarcoma tumorigenesis. FOXD2-AS1 interacted with downstream target FOXM1 mRNA through m6A sites, forming a FOXD2-AS1/m6A/FOXM1 complex to heighten FOXM1 mRNA stability.
Target Regulation Up regulation
Responsed Disease Osteosarcoma ICD-11: 2B51
 Disease Info 
In-vitro Model SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model In vivo animal assay, FOXD2-AS1 overexpression promoted the tumor growth in mice subcutaneous injection.
Osteosarcoma [ICD-11: 2B51]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [2]
Response Summary A remarkable m6A-modified site was found on the 3'-UTR of FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1), and m6A methyltransferase WTAP promoted the methylation modification, thus enhancing the stability of FOXD2-AS1 transcripts. m6A-modified FOXD2-AS1 accelerates the osteosarcoma progression through m6A manner, which provides new concepts for osteosarcoma tumorigenesis. FOXD2-AS1 interacted with downstream target FOXM1 mRNA through m6A sites, forming a FOXD2-AS1/m6A/FOXM1 complex to heighten FOXM1 mRNA stability.
Responsed Disease Osteosarcoma [ICD-11: 2B51]
Target Regulator Wilms tumor 1-associating protein (WTAP) WRITER
 Regulator Info 
Target Regulation Up regulation
In-vitro Model SaOS-2 Osteosarcoma Homo sapiens CVCL_0548
MG-63 Osteosarcoma Homo sapiens CVCL_0426
hFOB 1.19 Normal Homo sapiens CVCL_3708
In-vivo Model In vivo animal assay, FOXD2-AS1 overexpression promoted the tumor growth in mice subcutaneous injection.
Cervical cancer [ICD-11: 2C77]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3/FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1) accelerates cervical cancer progression via a m6A-dependent modality, which serves as a potential therapeutic target for cervical cancer.
Responsed Disease Cervical cancer [ICD-11: 2C77]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
 Regulator Info 
Target Regulation Up regulation
Cell Process Cell migration and proliferation
In-vitro Model C-33 A Cervical squamous cell carcinoma Homo sapiens CVCL_1094
Ca Ski Cervical squamous cell carcinoma Homo sapiens CVCL_1100
HaCaT Normal Homo sapiens CVCL_0038
HT-3 Cervical carcinoma Homo sapiens CVCL_1293
SiHa Cervical squamous cell carcinoma Homo sapiens CVCL_0032
In-vivo Model A total 5 × 106 stably transfected SiHa cells were subcutaneously injected into the flank of nude mice.
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
 Regulator Info 
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03505
 Crosstalk Info 
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
 Disease Info 
Crosstalk ID: M6ACROT03518
 Crosstalk Info 
Epigenetic Regulator WD repeat-containing protein 5 (WDR5)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
 Disease Info 
Non-coding RNA
m6A Regulator: Methyltransferase-like 3 (METTL3)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05521
 Crosstalk Info 
Epigenetic Regulator FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1)
Regulated Target Cyclin-dependent kinase inhibitor 1 (CDKN1A)
Crosstalk relationship m6A → ncRNA
Disease Cervical cancer
 Disease Info 
m6A Regulator: Wilms tumor 1-associating protein (WTAP)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05589
 Crosstalk Info 
Epigenetic Regulator FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1)
Regulated Target Forkhead box protein M1 (FOXM1)
Crosstalk relationship m6A → ncRNA
Disease Osteosarcoma
 Disease Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00094)
FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1)
N6-methyladenosine (m6A)
In total 37 m6A sequence/site(s) in this target gene
mod ID: M6ASITE024605 Click to Show/Hide the Full List
mod site chr1:47432153-47432154:- [3]
Sequence CCACCCCCCAGTGAATAAAGACTGAAGTTATTCATTCCAAA
Motif Score 3.319380952
Cell/Tissue List HeLa; GM12878; MT4; Huh7; HEK293A-TOA; MSC; TIME; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29502
mod ID: M6ASITE024616 Click to Show/Hide the Full List
mod site chr1:47432241-47432242:- [4]
Sequence GCCTGCTCTTCTCCAAAAAGACTGTGAATCCACTCCACCCA
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; GM12878; MT4; MM6; Huh7; Jurkat; HEK293A-TOA; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29503
mod ID: M6ASITE024627 Click to Show/Hide the Full List
mod site chr1:47432434-47432435:- [4]
Sequence CAGAGACTTTTAACCTCCGGACTCCACTCTTCGCTTATGTT
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; LCLs; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29504
mod ID: M6ASITE024638 Click to Show/Hide the Full List
mod site chr1:47432449-47432450:- [4]
Sequence CTTGGAAAAGTTATCCAGAGACTTTTAACCTCCGGACTCCA
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; LCLs; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29505
mod ID: M6ASITE024649 Click to Show/Hide the Full List
mod site chr1:47432508-47432509:- [4]
Sequence ACTAAAGGACTGGTTCTGAGACAAAGCACCCTTTCCTCACC
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29506
mod ID: M6ASITE024660 Click to Show/Hide the Full List
mod site chr1:47432520-47432521:- [4]
Sequence ACAGAGTCAGGAACTAAAGGACTGGTTCTGAGACAAAGCAC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29507
mod ID: M6ASITE024671 Click to Show/Hide the Full List
mod site chr1:47432528-47432529:- [4]
Sequence TCATCCACACAGAGTCAGGAACTAAAGGACTGGTTCTGAGA
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29508
mod ID: M6ASITE024682 Click to Show/Hide the Full List
mod site chr1:47432571-47432572:- [4]
Sequence TAGTAATGGATTCCTGGGGAACAGCGACCTCTGGAGGAGCC
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29509
mod ID: M6ASITE024693 Click to Show/Hide the Full List
mod site chr1:47432624-47432625:- [4]
Sequence ATAGAAGCAAAGCCAGGGGAACAGTGGGAGCTCTGGCCTCG
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; A549; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; MSC; TREX; iSLK; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29510
mod ID: M6ASITE024704 Click to Show/Hide the Full List
mod site chr1:47432740-47432741:- [4]
Sequence GTAACCCTTCTGAGTCCCAGACAGGGTAACTGGCGAGGCCG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; Jurkat; peripheral-blood; TIME; TREX; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29511
mod ID: M6ASITE024707 Click to Show/Hide the Full List
mod site chr1:47432786-47432787:- [4]
Sequence GCGACCTGTGTGTACCATAGACATGCACATGCGCTCACCTT
Motif Score 2.897386905
Cell/Tissue List HeLa; Jurkat; peripheral-blood; TIME; TREX; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29512
mod ID: M6ASITE024708 Click to Show/Hide the Full List
mod site chr1:47432866-47432867:- [4]
Sequence GGCACAGTGGCACCTCGGGAACAGGACGCCCTTCCGGGCCC
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; GM12878; MT4; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29513
mod ID: M6ASITE024709 Click to Show/Hide the Full List
mod site chr1:47432942-47432943:- [4]
Sequence TGCAGGGATCGCACTGAGGGACAGCCAAGAATACTCCAGCG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; GM12878; MT4; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29514
mod ID: M6ASITE024710 Click to Show/Hide the Full List
mod site chr1:47433039-47433040:- [4]
Sequence TGCTCGGGGTCAACAGCGAGACCCTAGTGGGGAATGAGGAT
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; U2OS; GM12878; MT4; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; MSC; TIME; TREX; iSLK; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29515
mod ID: M6ASITE024711 Click to Show/Hide the Full List
mod site chr1:47433062-47433063:- [4]
Sequence GACCTGGTCGGGGACGACAAACCTGCTCGGGGTCAACAGCG
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; MM6; Jurkat; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX; iSLK; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29516
mod ID: M6ASITE024712 Click to Show/Hide the Full List
mod site chr1:47433141-47433142:- [4]
Sequence GTCCACAGAGTGGACCCAGGACTGCCTGGAAGGCTTATCAT
Motif Score 4.065041667
Cell/Tissue List HeLa; Jurkat; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29517
mod ID: M6ASITE024713 Click to Show/Hide the Full List
mod site chr1:47433148-47433149:- [3]
Sequence GCTTGGTGTCCACAGAGTGGACCCAGGACTGCCTGGAAGGC
Motif Score 3.622404762
Cell/Tissue List HeLa; Jurkat; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29518
mod ID: M6ASITE024714 Click to Show/Hide the Full List
mod site chr1:47433175-47433176:- [3]
Sequence TCCTGTGTCCTCCCCTCCAGACCTCATGCTTGGTGTCCACA
Motif Score 2.876744048
Cell/Tissue List HeLa; Jurkat; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29519
mod ID: M6ASITE024715 Click to Show/Hide the Full List
mod site chr1:47433259-47433260:- [5]
Sequence CTCATGTGTCTGTCCTCTGGACAACAGTGGCTCTGTATGGC
Motif Score 3.643047619
Cell/Tissue List HEK293T; peripheral-blood; TIME; TREX; MSC; HEC-1-A
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29520
mod ID: M6ASITE024716 Click to Show/Hide the Full List
mod site chr1:47433345-47433346:- [4]
Sequence CCAGGTATGTGGGAAGGAGAACTTCATGTCTAAGTGCGCTC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; MM6; Jurkat; peripheral-blood; GSC-11; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29521
mod ID: M6ASITE024717 Click to Show/Hide the Full List
mod site chr1:47433460-47433461:- [4]
Sequence CGAAAACAGCGCCACTTGAAACCCGCCGGTCCTGAAGATCA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; GM12878; LCLs; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29522
mod ID: M6ASITE024718 Click to Show/Hide the Full List
mod site chr1:47433475-47433476:- [4]
Sequence GACCTCAGGAGAGACCGAAAACAGCGCCACTTGAAACCCGC
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; GM12878; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29523
mod ID: M6ASITE024719 Click to Show/Hide the Full List
mod site chr1:47433482-47433483:- [4]
Sequence GGGTTGCGACCTCAGGAGAGACCGAAAACAGCGCCACTTGA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; GM12878; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29524
mod ID: M6ASITE024720 Click to Show/Hide the Full List
mod site chr1:47433547-47433548:- [4]
Sequence AGTACTGCGCGGTTGTTGAGACCAAGGCGAGCTGCGGAGCC
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; GM12878; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29525
mod ID: M6ASITE024721 Click to Show/Hide the Full List
mod site chr1:47433584-47433585:- [4]
Sequence CCTGGACTATGTGGTAGGGGACTCGCTTAAGCACCCAAGTA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1B; GM12878; MT4; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29526
mod ID: M6ASITE024722 Click to Show/Hide the Full List
mod site chr1:47433599-47433600:- [4]
Sequence TCCCCCGCCCCCAACCCTGGACTATGTGGTAGGGGACTCGC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; GM12878; MT4; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29527
mod ID: M6ASITE024723 Click to Show/Hide the Full List
mod site chr1:47433804-47433805:- [4]
Sequence CCCGCGGAGGCAGACCTCAGACATGTTCCCCATGCACAGAA
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; GM12878; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29528
mod ID: M6ASITE024724 Click to Show/Hide the Full List
mod site chr1:47433811-47433812:- [4]
Sequence CCTGTGACCCGCGGAGGCAGACCTCAGACATGTTCCCCATG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; GM12878; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29529
mod ID: M6ASITE024725 Click to Show/Hide the Full List
mod site chr1:47433840-47433841:- [4]
Sequence GCCCAGGTGGGAGGCGGGAGACTCCAGATCCTGTGACCCGC
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29530
mod ID: M6ASITE024726 Click to Show/Hide the Full List
mod site chr1:47433969-47433970:- [4]
Sequence GAGCCTCCTTCCCACTCTGGACCTAGCTGCAGCTCCAAAGC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29531
mod ID: M6ASITE024727 Click to Show/Hide the Full List
mod site chr1:47434020-47434021:- [4]
Sequence AATTTTATTCACAAAACTGGACACCCTCAGGGAAAGCGGCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; hESC-HEK293T; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29532
mod ID: M6ASITE024728 Click to Show/Hide the Full List
mod site chr1:47434025-47434026:- [4]
Sequence TCTCTAATTTTATTCACAAAACTGGACACCCTCAGGGAAAG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; A549; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29533
mod ID: M6ASITE024729 Click to Show/Hide the Full List
mod site chr1:47434061-47434062:- [4]
Sequence GCCTGAGCTGGGCTTGGGGAACTACGCCCGCAGATTTCTCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hNPCs; GM12878; MM6; Jurkat; HEK293A-TOA; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29534
mod ID: M6ASITE024730 Click to Show/Hide the Full List
mod site chr1:47434196-47434197:- [4]
Sequence CTAATTAAGTCAATCAGGAAACTGCCGGAGAGCGGCACTGG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29535
mod ID: M6ASITE024731 Click to Show/Hide the Full List
mod site chr1:47434409-47434410:- [4]
Sequence TCTCCCTCGTGCAGCCCAGAACAATTGGGAGGAAGCGTTGG
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; U2OS; MM6; Jurkat; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX; iSLK
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29536
mod ID: M6ASITE024732 Click to Show/Hide the Full List
mod site chr1:47434571-47434572:- [4]
Sequence CTCCCTCCGCGAAAACCTGGACTCTTTCCCAGAAGCCTTGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29537
mod ID: M6ASITE024733 Click to Show/Hide the Full List
mod site chr1:47434577-47434578:- [4]
Sequence CCGTCGCTCCCTCCGCGAAAACCTGGACTCTTTCCCAGAAG
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000445551.1
External Link RMBase: m6A_site_29538