m6A-centered Crosstalk Information

Mechanism of Crosstalk between m6A Modification and Epigenetic Regulation

m6A Modification:
Crosstalk ID	M6ACROT00561				[1], [2], [3]
m⁶A modification DANCR DANCR IGF2BP2 : m⁶A sites Indirect Enhancement RNA modification SOX2 SOX2 FTO Demethylation : modification sites
m6A Regulator	Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2)			READER	Regulator Info
m6A Target	Differentiation antagonizing non-protein coding RNA (DANCR)				Targert Gene
Epigenetic Regulation that have Cross-talk with This m6A Modification:
Epigenetic Regulation Type	RNA modification (RNAMod) >> N6,2'-O-dimethyladenosine (m6Am)
Epigenetic Regulator	Fat mass and obesity-associated protein (FTO)			ERASER	View Details
Regulated Target	Transcription factor SOX-2 (SOX2)				View Details
Crosstalk Relationship	m6A → m6Am			Enhancement
Crosstalk Mechanism	m6A modification indirectly impacts RNA modification through downstream signaling pathways
Crosstalk Summary	IGF2BP2 interacts with Differentiation antagonizing non-protein coding RNA (DANCR), decreasing its m6A level and promoting its physical interaction with Transcription factor SOX-2 (SOX2), which was regulated by FTO-mediated m6Am modification.
In-vitro Model	MHCC97-H	Adult hepatocellular carcinoma	Homo sapiens		CVCL_4972
	BxPC-3	Pancreatic ductal adenocarcinoma	Homo sapiens		CVCL_0186
	SW1990	Pancreatic adenocarcinoma	Homo sapiens		CVCL_1723

References

Ref 1	AMD1 upregulates hepatocellular carcinoma cells stemness by FTO mediated mRNA demethylation. Clin Transl Med. 2021 Mar;11(3):e352. doi: 10.1002/ctm2.352.
Ref 2	IGF2BP2 regulates DANCR by serving as an N6-methyladenosine reader. Cell Death Differ. 2020 Jun;27(6):1782-1794. doi: 10.1038/s41418-019-0461-z. Epub 2019 Dec 5.
Ref 3	Long Noncoding RNA DANCR Regulates Cell Proliferation by Stabilizing SOX2 mRNA in Nasopharyngeal Carcinoma. Am J Pathol. 2020 Dec;190(12):2343-2354. doi: 10.1016/j.ajpath.2020.09.005. Epub 2020 Sep 22.