m6A Target Genes of This Regulator
General Information of the m6A Regulator (ID: REG00005)
Regulator Name | RNA demethylase ALKBH5 (ALKBH5) | ||||
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Synonyms |
Alkylated DNA repair protein alkB homolog 5; Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5; ABH5; OFOXD1
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Gene Name | ALKBH5 | ||||
Regulator Type | ERASER READER WRITER | ||||
Regulator Link | Click to View Full Information of This Regulator |
Full List of Target Gene(s) of This m6A Regulator
(
Full Data Download
)
Protein coding
Gene with protein product
In total 10958 target gene(s) | ||||
1,4-alpha-glucan branching enzyme 1 (GBE1) | [1] | |||
HGNC ID | HGNC:4180 | |||
Ensembl ID | ENSG00000114480 | |||
Uniprot ID | GLGB_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 2.188302867; p-value: 0.010734622 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
1-acylglycerol-3-phosphate O-acyltransferase 1 (AGPAT1) | [1] | |||
HGNC ID | HGNC:324 | |||
Ensembl ID | ENSG00000204310 | |||
Uniprot ID | PLCA_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.610944164; p-value: 0.01955833 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3) | [1] | |||
HGNC ID | HGNC:326 | |||
Ensembl ID | ENSG00000160216 | |||
Uniprot ID | PLCC_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 2.358256798; p-value: 0.000715632 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
1-acylglycerol-3-phosphate O-acyltransferase 4 (AGPAT4) | [1] | |||
HGNC ID | HGNC:20885 | |||
Ensembl ID | ENSG00000026652 | |||
Uniprot ID | PLCD_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.259248681; p-value: 0.004553047 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
1-acylglycerol-3-phosphate O-acyltransferase 5 (AGPAT5) | [2] | |||
HGNC ID | HGNC:20886 | |||
Ensembl ID | ENSG00000155189 | |||
Uniprot ID | PLCE_HUMAN | |||
Method | RNA-seq | GSE128574 | ||
Condition | knock down | |||
Evidence | logFC: -0.93066375; p-value: 0.002469447 | |||
Cell Line | THP1 | Acute myeloid leukemia | Homo sapiens | CVCL_0006 |
15-hydroxyprostaglandin dehydrogenase (HPGD) | [3] | |||
HGNC ID | HGNC:5154 | |||
Ensembl ID | ENSG00000164120 | |||
Uniprot ID | PGDH_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 1.254938958; p-value: 0.00296501 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
2'-5'-oligoadenylate synthetase 1 (OAS1) | [1] | |||
HGNC ID | HGNC:8086 | |||
Ensembl ID | ENSG00000089127 | |||
Uniprot ID | OAS1_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.007778627; p-value: 0.004802165 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
2'-5'-oligoadenylate synthetase 2 (OAS2) | [4] | |||
HGNC ID | HGNC:8087 | |||
Ensembl ID | ENSG00000111335 | |||
Uniprot ID | OAS2_HUMAN | |||
Method | RNA-seq | GSE185886 | ||
Condition | knock down | |||
Evidence | logFC: -1.815892165; p-value: 0.000546547 | |||
Cell Line | Cal27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
2'-5'-oligoadenylate synthetase 3 (OAS3) | [1] | |||
HGNC ID | HGNC:8088 | |||
Ensembl ID | ENSG00000111331 | |||
Uniprot ID | OAS3_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.737329008; p-value: 0.015676757 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
2'-5'-oligoadenylate synthetase like (OASL) | [5] | |||
HGNC ID | HGNC:8090 | |||
Ensembl ID | ENSG00000135114 | |||
Uniprot ID | OASL_HUMAN | |||
Method | RNA-seq | GSE154528 | ||
Condition | knock down | |||
Evidence | logFC: 0.907581154; p-value: 0.001657578 | |||
Cell Line | 143B cell line | Osteosarcoma | Homo sapiens | CVCL_2270 |
Click to Download All Target Gene of This Genetic Class | ||||
Pseudogene
Immunoglobulin pseudogene
In total 3 target gene(s) | ||||
Immunoglobulin heavy joining 3P (pseudogene) (IGHJ3P) | [7] | |||
HGNC ID | HGNC:5537 | |||
Ensembl ID | ENSG00000237111 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.936790515; p-value: 0.024438776 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy variable 3/OR16-7 (pseudogene) (IGHV3OR16-7) | [7] | |||
HGNC ID | HGNC:5642 | |||
Ensembl ID | ENSG00000271620 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.575844497; p-value: 0.000962182 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin lambda variable (I)-70 (pseudogene) (IGLVI-70) | [7] | |||
HGNC ID | HGNC:5940 | |||
Ensembl ID | ENSG00000253239 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.065951296; p-value: 0.027162939 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Click to Download All Target Gene of This Genetic Class | ||||
Pseudogene
In total 742 target gene(s) | ||||
5-hydroxytryptamine receptor 7 pseudogene 1 (HTR7P1) | [1] | |||
HGNC ID | HGNC:30411 | |||
Ensembl ID | ENSG00000183935 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.096452702; p-value: 0.002149799 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
AARSD1 pseudogene 1 (AARSD1P1) | [7] | |||
HGNC ID | HGNC:54994 | |||
Ensembl ID | ENSG00000234969 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.435648184; p-value: 0.000435523 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Acidic nuclear phosphoprotein 32 family member A pseudogene 1 (ANP32AP1) | [1] | |||
HGNC ID | HGNC:42949 | |||
Ensembl ID | ENSG00000259516 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.593931008; p-value: 0.001291548 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
ACTB pseudogene 2 (ACTBP2) | [7] | |||
HGNC ID | HGNC:135 | |||
Ensembl ID | ENSG00000213763 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.849495967; p-value: 0.000137872 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Actin family pseudogene 1 (ACTP1) | [6] | |||
HGNC ID | HGNC:51621 | |||
Ensembl ID | ENSG00000229890 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 0.661903656; p-value: 0.02273574 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Actin gamma 1 pseudogene 16 (ACTG1P16) | [6] | |||
HGNC ID | HGNC:51496 | |||
Ensembl ID | ENSG00000260298 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 1.035673282; p-value: 0.002695532 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Actin gamma 1 pseudogene 20 (ACTG1P20) | [2] | |||
HGNC ID | HGNC:51500 | |||
Ensembl ID | ENSG00000241547 | |||
Method | RNA-seq | GSE128574 | ||
Condition | knock down | |||
Evidence | logFC: 1.676350759; p-value: 0.003187405 | |||
Cell Line | THP1 | Acute myeloid leukemia | Homo sapiens | CVCL_0006 |
Actin gamma 1 pseudogene 24 (ACTG1P24) | [6] | |||
HGNC ID | HGNC:49661 | |||
Ensembl ID | ENSG00000226359 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 0.967971671; p-value: 0.015747695 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Activator of HSP90 ATPase homolog 2, pseudogene (AHSA2P) | [6] | |||
HGNC ID | HGNC:20437 | |||
Ensembl ID | ENSG00000173209 | |||
Uniprot ID | AHSA2_HUMAN | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 0.890968637; p-value: 0.009241442 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Adenosylmethionine decarboxylase 1 pseudogene 4 (AMD1P4) | [7] | |||
HGNC ID | HGNC:51609 | |||
Ensembl ID | ENSG00000215124 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.712325417; p-value: 0.007002993 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Click to Download All Target Gene of This Genetic Class | ||||
T cell receptor pseudogene
In total 3 target gene(s) | ||||
T cell receptor alpha variable 33 (pseudogene) (TRAV33) | [3] | |||
HGNC ID | HGNC:12132 | |||
Ensembl ID | ENSG00000258812 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -1.143500364; p-value: 0.000170374 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
T cell receptor gamma variable 5P (pseudogene) (TRGV5P) | [7] | |||
HGNC ID | HGNC:12291 | |||
Ensembl ID | ENSG00000228668 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.822732263; p-value: 0.030813021 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
T cell receptor gamma variable 6 (pseudogene) (TRGV6) | [7] | |||
HGNC ID | HGNC:12292 | |||
Ensembl ID | ENSG00000226212 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.291192156; p-value: 0.005923864 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Click to Download All Target Gene of This Genetic Class | ||||
Long non-coding
Long non-coding RNA
In total 822 target gene(s) | ||||
A1BG antisense RNA 1 (A1BG-AS1) | [1] | |||
HGNC ID | HGNC:37133 | |||
Ensembl ID | ENSG00000268895 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.622718525; p-value: 0.046815723 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
ACTR3 antisense RNA 1 (ACTR3-AS1) | [7] | |||
HGNC ID | HGNC:53965 | |||
Ensembl ID | ENSG00000228857 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.589094369; p-value: 0.004736059 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
ACVR2B antisense RNA 1 (ACVR2B-AS1) | [1] | |||
HGNC ID | HGNC:44161 | |||
Ensembl ID | ENSG00000229589 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.959103823; p-value: 0.006653244 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
ADAMTSL4 antisense RNA 1 (ADAMTSL4-AS1) | [7] | |||
HGNC ID | HGNC:32041 | |||
Ensembl ID | ENSG00000203804 | |||
Uniprot ID | A4AS1_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 2.119782114; p-value: 0.000150969 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
ADAMTSL4 antisense RNA 2 (ADAMTSL4-AS2) | [7] | |||
HGNC ID | HGNC:40895 | |||
Ensembl ID | ENSG00000237781 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 2.119782114; p-value: 0.000150969 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
ADORA2A antisense RNA 1 (ADORA2A-AS1) | [7] | |||
HGNC ID | HGNC:37122 | |||
Ensembl ID | ENSG00000178803 | |||
Uniprot ID | AAS1_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.667477843; p-value: 0.009722935 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
AKAP1 divergent transcript (AKAP1-DT) | [3] | |||
HGNC ID | HGNC:55339 | |||
Ensembl ID | ENSG00000263004 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 0.731895693; p-value: 3.56E-06 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
ALG13 antisense RNA 1 (ALG13-AS1) | [7] | |||
HGNC ID | HGNC:41277 | |||
Ensembl ID | ENSG00000229487 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.73163394; p-value: 9.47E-05 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
ALMS1 intronic transcript 1 (ALMS1-IT1) | [7] | |||
HGNC ID | HGNC:41305 | |||
Ensembl ID | ENSG00000230002 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 4.68550858; p-value: 0.007754552 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
ALOX12 antisense RNA 1 (ALOX12-AS1) | [1] | |||
HGNC ID | HGNC:51342 | |||
Ensembl ID | ENSG00000215067 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.483611146; p-value: 7.13E-19 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Click to Download All Target Gene of This Genetic Class | ||||
Short non-coding
Micro RNA
In total 116 target gene(s) | ||||
MicroRNA 122 (MIR122) | [3] | |||
HGNC ID | HGNC:31501 | |||
Ensembl ID | ENSG00000284440 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -0.631887998; p-value: 0.024431084 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
MicroRNA 1229 (MIR1229) | [3] | |||
HGNC ID | HGNC:33924 | |||
Ensembl ID | ENSG00000221394 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 0.612336502; p-value: 1.71E-06 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
MicroRNA 124-1 (MIR124-1) | [1] | |||
HGNC ID | HGNC:31502 | |||
Ensembl ID | ENSG00000284321 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.708704697; p-value: 0.007631128 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
MicroRNA 1244-3 (MIR1244-3) | [3] | |||
HGNC ID | HGNC:38390 | |||
Ensembl ID | ENSG00000283429 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -0.779410201; p-value: 0.004107803 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
MicroRNA 1282 (MIR1282) | [1] | |||
HGNC ID | HGNC:35360 | |||
Ensembl ID | ENSG00000221792 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.710121666; p-value: 0.033667654 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
MicroRNA 1290 (MIR1290) | [6] | |||
HGNC ID | HGNC:35283 | |||
Ensembl ID | ENSG00000221662 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: -2.93279709; p-value: 0.004111848 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
MicroRNA 1304 (MIR1304) | [3] | |||
HGNC ID | HGNC:35302 | |||
Ensembl ID | ENSG00000284458 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -1.964091534; p-value: 3.50E-05 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
MicroRNA 142 (MIR142) | [1] | |||
HGNC ID | HGNC:31529 | |||
Ensembl ID | ENSG00000284353 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.087620885; p-value: 0.001976567 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
MicroRNA 147b (MIR147B) | [3] | |||
HGNC ID | HGNC:33655 | |||
Ensembl ID | ENSG00000284386 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 0.591470128; p-value: 0.013090125 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
MicroRNA 1827 (MIR1827) | [7] | |||
HGNC ID | HGNC:35391 | |||
Ensembl ID | ENSG00000221476 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.712479989; p-value: 0.012283532 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
Click to Download All Target Gene of This Genetic Class | ||||
Misc RNA
In total 2 target gene(s) | ||||
Ribonuclease P RNA component H1 (RPPH1) | [1] | |||
HGNC ID | HGNC:19273 | |||
Ensembl ID | ENSG00000277209 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.684306804; p-value: 0.01797232 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
RNA component of mitochondrial RNA processing endoribonuclease (RMRP) | [1] | |||
HGNC ID | HGNC:10031 | |||
Ensembl ID | ENSG00000277027 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.746266849; p-value: 7.64E-06 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Click to Download All Target Gene of This Genetic Class | ||||
Ribosomal RNA
In total 4 target gene(s) | ||||
RNA, 5.8S ribosomal N1 (RNA5-8SN1) | [3] | |||
HGNC ID | HGNC:53517 | |||
Ensembl ID | ENSG00000278189 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 1.147505165; p-value: 5.92E-05 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
RNA, 5.8S ribosomal N2 (RNA5-8SN2) | [3] | |||
HGNC ID | HGNC:53521 | |||
Ensembl ID | ENSG00000278233 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -0.680559181; p-value: 4.31E-05 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
RNA, 5.8S ribosomal N3 (RNA5-8SN3) | [7] | |||
HGNC ID | HGNC:53525 | |||
Ensembl ID | ENSG00000275215 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.596112912; p-value: 0.00410604 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
RNA, 5S ribosomal 9 (RNA5S9) | [6] | |||
HGNC ID | HGNC:34370 | |||
Ensembl ID | ENSG00000201321 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: -0.698009423; p-value: 0.034635838 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Click to Download All Target Gene of This Genetic Class | ||||
Small nuclear RNA
In total 19 target gene(s) | ||||
RNA, U1 small nuclear 1 (RNU1-1) | [6] | |||
HGNC ID | HGNC:10120 | |||
Ensembl ID | ENSG00000206652 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 0.837627582; p-value: 0.00130922 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
RNA, U1 small nuclear 2 (RNU1-2) | [6] | |||
HGNC ID | HGNC:10123 | |||
Ensembl ID | ENSG00000207005 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: -2.254738021; p-value: 3.03E-05 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
RNA, U11 small nuclear (RNU11) | [1] | |||
HGNC ID | HGNC:10108 | |||
Ensembl ID | ENSG00000274978 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.433561391; p-value: 0.001696046 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
RNA, U12 small nuclear (RNU12) | [1] | |||
HGNC ID | HGNC:19380 | |||
Ensembl ID | ENSG00000276027 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.140039707; p-value: 0.002358256 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
RNA, U4 small nuclear 1 (RNU4-1) | [1] | |||
HGNC ID | HGNC:10192 | |||
Ensembl ID | ENSG00000200795 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.826840158; p-value: 0.002506378 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
RNA, U4 small nuclear 2 (RNU4-2) | [1] | |||
HGNC ID | HGNC:10193 | |||
Ensembl ID | ENSG00000202538 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.183975163; p-value: 0.048973099 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
RNA, U4atac small nuclear (RNU4ATAC) | [1] | |||
HGNC ID | HGNC:34016 | |||
Ensembl ID | ENSG00000264229 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.060492033; p-value: 0.001168493 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
RNA, U5A small nuclear 1 (RNU5A-1) | [7] | |||
HGNC ID | HGNC:10211 | |||
Ensembl ID | ENSG00000199568 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.8234359; p-value: 0.036299515 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
RNA, U5B small nuclear 1 (RNU5B-1) | [7] | |||
HGNC ID | HGNC:10212 | |||
Ensembl ID | ENSG00000200156 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.744826111; p-value: 1.71E-05 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
RNA, U5F small nuclear 1 (RNU5F-1) | [1] | |||
HGNC ID | HGNC:10216 | |||
Ensembl ID | ENSG00000199377 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.713986961; p-value: 0.00033613 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Click to Download All Target Gene of This Genetic Class | ||||
Small nucleolar RNA
In total 88 target gene(s) | ||||
Small Cajal body-specific RNA 1 (SCARNA1) | [6] | |||
HGNC ID | HGNC:32555 | |||
Ensembl ID | ENSG00000252947 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 0.696800249; p-value: 0.003325405 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Small Cajal body-specific RNA 10 (SCARNA10) | [1] | |||
HGNC ID | HGNC:32567 | |||
Ensembl ID | ENSG00000239002 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.769984789; p-value: 2.90E-06 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Small Cajal body-specific RNA 11 (SCARNA11) | [7] | |||
HGNC ID | HGNC:32568 | |||
Ensembl ID | ENSG00000251898 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.114047948; p-value: 0.003997395 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Small Cajal body-specific RNA 12 (SCARNA12) | [8] | |||
HGNC ID | HGNC:32569 | |||
Ensembl ID | ENSG00000238795 | |||
Method | RNA-seq | GSE78040 | ||
Condition | knock down | |||
Evidence | logFC: 0.940186688; p-value: 0.013218306 | |||
Cell Line | HEK293T | Healthy | Homo sapiens | CVCL_0045 |
Small Cajal body-specific RNA 14 (SCARNA14) | [5] | |||
HGNC ID | HGNC:32571 | |||
Ensembl ID | ENSG00000252712 | |||
Method | RNA-seq | GSE154528 | ||
Condition | knock down | |||
Evidence | logFC: 0.919723194; p-value: 0.002746386 | |||
Cell Line | 143B cell line | Osteosarcoma | Homo sapiens | CVCL_2270 |
Small Cajal body-specific RNA 16 (SCARNA16) | [1] | |||
HGNC ID | HGNC:32573 | |||
Ensembl ID | ENSG00000275143 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.72418188; p-value: 0.001851041 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Small Cajal body-specific RNA 17 (SCARNA17) | [1] | |||
HGNC ID | HGNC:32574 | |||
Ensembl ID | ENSG00000251992 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.825083374; p-value: 0.025722896 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Small Cajal body-specific RNA 18 (SCARNA18) | [1] | |||
HGNC ID | HGNC:32559 | |||
Ensembl ID | ENSG00000238835 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.844858312; p-value: 0.002101486 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Small Cajal body-specific RNA 2 (SCARNA2) | [1] | |||
HGNC ID | HGNC:32558 | |||
Ensembl ID | ENSG00000278249 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.693892393; p-value: 0.007510348 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Small Cajal body-specific RNA 3 (SCARNA3) | [1] | |||
HGNC ID | HGNC:32577 | |||
Ensembl ID | ENSG00000252906 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.130109972; p-value: 0.046582885 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Click to Download All Target Gene of This Genetic Class | ||||
Transfer RNA
In total 8 target gene(s) | ||||
Mitochondrially encoded tRNA-Arg (CGN) (MT-TR) | [6] | |||
HGNC ID | HGNC:7496 | |||
Ensembl ID | ENSG00000210174 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: 0.764938781; p-value: 0.019594456 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Mitochondrially encoded tRNA-Cys (UGU/C) (MT-TC) | [6] | |||
HGNC ID | HGNC:7477 | |||
Ensembl ID | ENSG00000210140 | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: -0.729144658; p-value: 0.04473143 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
Mitochondrially encoded tRNA-Gln (CAA/G) (MT-TQ) | [7] | |||
HGNC ID | HGNC:7495 | |||
Ensembl ID | ENSG00000210107 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.653719919; p-value: 0.033290655 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Mitochondrially encoded tRNA-Glu (GAA/G) (MT-TE) | [7] | |||
HGNC ID | HGNC:7479 | |||
Ensembl ID | ENSG00000210194 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.795006999; p-value: 0.008373128 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Mitochondrially encoded tRNA-Leu (UUA/G) 1 (MT-TL1) | [7] | |||
HGNC ID | HGNC:7490 | |||
Ensembl ID | ENSG00000209082 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.762517069; p-value: 0.018495065 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
Mitochondrially encoded tRNA-Met (AUA/G) (MT-TM) | [7] | |||
HGNC ID | HGNC:7492 | |||
Ensembl ID | ENSG00000210112 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.806738568; p-value: 0.038191178 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
Mitochondrially encoded tRNA-Trp (UGA/G) (MT-TW) | [7] | |||
HGNC ID | HGNC:7501 | |||
Ensembl ID | ENSG00000210117 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.588692755; p-value: 0.044613849 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Mitochondrially encoded tRNA-Val (GUN) (MT-TV) | [7] | |||
HGNC ID | HGNC:7500 | |||
Ensembl ID | ENSG00000210077 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.208344967; p-value: 0.03466601 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Click to Download All Target Gene of This Genetic Class | ||||
Vault RNA
In total 1 target gene(s) | ||||
Vault RNA 1-1 (VTRNA1-1) | [1] | |||
HGNC ID | HGNC:12654 | |||
Ensembl ID | ENSG00000199990 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.126044848; p-value: 0.001555921 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Click to Download All Target Gene of This Genetic Class | ||||
Other
Complex locus constituent
In total 9 target gene(s) | ||||
Protocadherin alpha 11 (PCDHA11) | [6] | |||
HGNC ID | HGNC:8665 | |||
Ensembl ID | ENSG00000249158 | |||
Uniprot ID | PCDAB_HUMAN | |||
Method | RNA-seq | GSE182382 | ||
Condition | knock down | |||
Evidence | logFC: -0.711925269; p-value: 0.020852639 | |||
Cell Line | DKO-1 | Colorectal cancer | Homo sapiens | CVCL_9798 |
UDP glucuronosyltransferase family 1 member A1 (UGT1A1) | [3] | |||
HGNC ID | HGNC:12530 | |||
Ensembl ID | ENSG00000241635 | |||
Uniprot ID | UD11_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 1.284849545; p-value: 0.000149879 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A10 (UGT1A10) | [3] | |||
HGNC ID | HGNC:12531 | |||
Ensembl ID | ENSG00000242515 | |||
Uniprot ID | UD110_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -0.976523039; p-value: 0.000200679 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A2, pseudogene (UGT1A2P) | [3] | |||
HGNC ID | HGNC:12534 | |||
Ensembl ID | ENSG00000228445 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -0.763788838; p-value: 0.036921399 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A4 (UGT1A4) | [3] | |||
HGNC ID | HGNC:12536 | |||
Ensembl ID | ENSG00000244474 | |||
Uniprot ID | UD14_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -1.952532812; p-value: 0.000266016 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A6 (UGT1A6) | [3] | |||
HGNC ID | HGNC:12538 | |||
Ensembl ID | ENSG00000167165 | |||
Uniprot ID | UD16_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -2.081543804; p-value: 0.003509435 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A7 (UGT1A7) | [3] | |||
HGNC ID | HGNC:12539 | |||
Ensembl ID | ENSG00000244122 | |||
Uniprot ID | UD17_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 0.761348338; p-value: 0.008924087 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A8 (UGT1A8) | [3] | |||
HGNC ID | HGNC:12540 | |||
Ensembl ID | ENSG00000242366 | |||
Uniprot ID | UD18_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 2.893732707; p-value: 0.000130276 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
UDP glucuronosyltransferase family 1 member A9 (UGT1A9) | [3] | |||
HGNC ID | HGNC:12541 | |||
Ensembl ID | ENSG00000241119 | |||
Uniprot ID | UD19_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -3.174999091; p-value: 1.65E-06 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
Click to Download All Target Gene of This Genetic Class | ||||
Endogenous retrovirus
In total 1 target gene(s) | ||||
Endogenous retrovirus group K13 member 1 (ERVK13-1) | [1] | |||
HGNC ID | HGNC:27548 | |||
Ensembl ID | ENSG00000260565 | |||
Uniprot ID | ENK13_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.146871775; p-value: 1.98E-05 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Click to Download All Target Gene of This Genetic Class | ||||
Immunoglobulin gene
In total 19 target gene(s) | ||||
Immunoglobulin heavy constant alpha 1 (IGHA1) | [7] | |||
HGNC ID | HGNC:5478 | |||
Ensembl ID | ENSG00000211895 | |||
Uniprot ID | IGHA1_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.720656294; p-value: 0.040280795 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy constant alpha 2 (A2m marker) (IGHA2) | [7] | |||
HGNC ID | HGNC:5479 | |||
Ensembl ID | ENSG00000211890 | |||
Uniprot ID | IGHA2_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.137306052; p-value: 0.045036289 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
Immunoglobulin heavy constant epsilon (IGHE) | [7] | |||
HGNC ID | HGNC:5522 | |||
Ensembl ID | ENSG00000211891 | |||
Uniprot ID | IGHE_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.893106424; p-value: 0.011261064 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy constant gamma 1 (G1m marker) (IGHG1) | [7] | |||
HGNC ID | HGNC:5525 | |||
Ensembl ID | ENSG00000211896 | |||
Uniprot ID | IGHG1_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -5.180816477; p-value: 0.048900564 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy constant gamma 2 (G2m marker) (IGHG2) | [7] | |||
HGNC ID | HGNC:5526 | |||
Ensembl ID | ENSG00000211893 | |||
Uniprot ID | IGHG2_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.091469394; p-value: 0.046842388 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy constant gamma 3 (G3m marker) (IGHG3) | [7] | |||
HGNC ID | HGNC:5527 | |||
Ensembl ID | ENSG00000211897 | |||
Uniprot ID | IGHG3_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.378763874; p-value: 0.001589115 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy constant gamma 4 (G4m marker) (IGHG4) | [7] | |||
HGNC ID | HGNC:5528 | |||
Ensembl ID | ENSG00000211892 | |||
Uniprot ID | IGHG4_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -2.73039105; p-value: 0.015302918 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin heavy joining 6 (IGHJ6) | [7] | |||
HGNC ID | HGNC:5540 | |||
Ensembl ID | ENSG00000211900 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.818794097; p-value: 0.007706945 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin kappa constant (IGKC) | [7] | |||
HGNC ID | HGNC:5716 | |||
Ensembl ID | ENSG00000211592 | |||
Uniprot ID | IGKC_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.397753599; p-value: 0.013713079 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Immunoglobulin kappa variable 1/OR2-108 (non-functional) (IGKV1OR2-108) | [2] | |||
HGNC ID | HGNC:5767 | |||
Ensembl ID | ENSG00000231292 | |||
Method | RNA-seq | GSE128574 | ||
Condition | knock down | |||
Evidence | logFC: -1.034472579; p-value: 0.035506578 | |||
Cell Line | THP1 | Acute myeloid leukemia | Homo sapiens | CVCL_0006 |
Click to Download All Target Gene of This Genetic Class | ||||
Protocadherin
In total 5 target gene(s) | ||||
Protocadherin beta 5 (PCDHB5) | [2] | |||
HGNC ID | HGNC:8690 | |||
Ensembl ID | ENSG00000113209 | |||
Uniprot ID | PCDB5_HUMAN | |||
Method | RNA-seq | GSE128574 | ||
Condition | knock down | |||
Evidence | logFC: -1.322258409; p-value: 0.000850231 | |||
Cell Line | THP1 | Acute myeloid leukemia | Homo sapiens | CVCL_0006 |
Protocadherin beta 6 (PCDHB6) | [7] | |||
HGNC ID | HGNC:8691 | |||
Ensembl ID | ENSG00000113211 | |||
Uniprot ID | PCDB6_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.011196203; p-value: 0.000247277 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Protocadherin gamma subfamily A, 11 (PCDHGA11) | [1] | |||
HGNC ID | HGNC:8698 | |||
Ensembl ID | ENSG00000253873 | |||
Uniprot ID | PCDGB_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.005182847; p-value: 0.001583188 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Protocadherin gamma subfamily C, 3 (PCDHGC3) | [1] | |||
HGNC ID | HGNC:8716 | |||
Ensembl ID | ENSG00000240184 | |||
Uniprot ID | PCDGK_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.798551613; p-value: 0.009040726 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Protocadherin gamma subfamily C, 5 (PCDHGC5) | [1] | |||
HGNC ID | HGNC:8718 | |||
Ensembl ID | ENSG00000240764 | |||
Uniprot ID | PCDGM_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -1.079986209; p-value: 0.002368009 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Click to Download All Target Gene of This Genetic Class | ||||
Readthrough
In total 44 target gene(s) | ||||
ARMCX5-GPRASP2 readthrough (ARMCX5-GPRASP2) | [1] | |||
HGNC ID | HGNC:42000 | |||
Ensembl ID | ENSG00000271147 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.7047356; p-value: 0.006107494 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
ARPC4-TTLL3 readthrough (ARPC4-TTLL3) | [1] | |||
HGNC ID | HGNC:38830 | |||
Ensembl ID | ENSG00000250151 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 1.672389721; p-value: 0.006539046 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
ATF7-NPFF readthrough (ATF7-NPFF) | [4] | |||
HGNC ID | HGNC:55073 | |||
Ensembl ID | ENSG00000267281 | |||
Method | RNA-seq | GSE185886 | ||
Condition | knock down | |||
Evidence | logFC: -0.942053341; p-value: 0.027408493 | |||
Cell Line | Cal27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
BIVM-ERCC5 readthrough (BIVM-ERCC5) | [1] | |||
HGNC ID | HGNC:43690 | |||
Ensembl ID | ENSG00000270181 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.854030924; p-value: 2.91E-12 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
BLOC1S5-TXNDC5 readthrough (NMD candidate) (BLOC1S5-TXNDC5) | [1] | |||
HGNC ID | HGNC:42001 | |||
Ensembl ID | ENSG00000259040 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.984195713; p-value: 2.34E-26 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
BOLA2-SMG1P6 readthrough (BOLA2-SMG1P6) | [1] | |||
HGNC ID | HGNC:53563 | |||
Ensembl ID | ENSG00000261740 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.592425943; p-value: 0.044933024 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
BORCS7-ASMT readthrough (NMD candidate) (BORCS7-ASMT) | [8] | |||
HGNC ID | HGNC:49183 | |||
Ensembl ID | ENSG00000270316 | |||
Method | RNA-seq | GSE78040 | ||
Condition | knock down | |||
Evidence | logFC: -0.663259289; p-value: 0.023832953 | |||
Cell Line | HEK293T | Healthy | Homo sapiens | CVCL_0045 |
C1QTNF3-AMACR readthrough (NMD candidate) (C1QTNF3-AMACR) | [1] | |||
HGNC ID | HGNC:49198 | |||
Ensembl ID | ENSG00000273294 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.62255753; p-value: 0.001031128 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
C8orf44-SGK3 readthrough (C8orf44-SGK3) | [1] | |||
HGNC ID | HGNC:48354 | |||
Ensembl ID | ENSG00000288602 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.835578911; p-value: 3.01E-07 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
CCL15-CCL14 readthrough (NMD candidate) (CCL15-CCL14) | [3] | |||
HGNC ID | HGNC:44436 | |||
Ensembl ID | ENSG00000275688 | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: 3.046391414; p-value: 0.004191652 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
Click to Download All Target Gene of This Genetic Class | ||||
T cell receptor gene
In total 8 target gene(s) | ||||
T cell receptor alpha variable 18 (TRAV18) | [7] | |||
HGNC ID | HGNC:12114 | |||
Ensembl ID | ENSG00000211798 | |||
Uniprot ID | TVA18_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.720359789; p-value: 0.043443527 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
T cell receptor beta constant 1 (TRBC1) | [7] | |||
HGNC ID | HGNC:12156 | |||
Ensembl ID | ENSG00000211751 | |||
Uniprot ID | TRBC1_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.339916454; p-value: 0.004099616 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
T cell receptor beta constant 2 (TRBC2) | [7] | |||
HGNC ID | HGNC:12157 | |||
Ensembl ID | ENSG00000211772 | |||
Uniprot ID | TRBC2_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.626095879; p-value: 0.04229514 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
T cell receptor beta joining 2-4 (TRBJ2-4) | [7] | |||
HGNC ID | HGNC:12172 | |||
Ensembl ID | ENSG00000211768 | |||
Uniprot ID | TJB24_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -1.076573173; p-value: 0.008492948 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
T cell receptor beta variable 10-3 (TRBV10-3) | [7] | |||
HGNC ID | HGNC:12179 | |||
Ensembl ID | ENSG00000275791 | |||
Uniprot ID | TVBJ3_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.648901737; p-value: 0.017395347 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
T cell receptor beta variable 2 (TRBV2) | [7] | |||
HGNC ID | HGNC:12195 | |||
Ensembl ID | ENSG00000226660 | |||
Uniprot ID | TVB2_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: -0.688770772; p-value: 0.027651785 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
T cell receptor beta variable 6-6 (TRBV6-6) | [7] | |||
HGNC ID | HGNC:12231 | |||
Ensembl ID | ENSG00000211724 | |||
Uniprot ID | TVB66_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.705779185; p-value: 0.0030281 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
T cell receptor delta diversity 3 (TRDD3) | [7] | |||
HGNC ID | HGNC:12256 | |||
Ensembl ID | ENSG00000228985 | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 1.004869565; p-value: 0.038588892 | |||
Cell Line | CAG cell line | Multiple myeloma | Homo sapiens | CVCL_D569 |
Click to Download All Target Gene of This Genetic Class | ||||
Unknown
In total 10 target gene(s) | ||||
Adhesion G protein-coupled receptor F2 (ADGRF2) | [4] | |||
HGNC ID | HGNC:18991 | |||
Ensembl ID | ENSG00000164393 | |||
Uniprot ID | AGRF2_HUMAN | |||
Method | RNA-seq | GSE185886 | ||
Condition | knock down | |||
Evidence | logFC: -0.635976813; p-value: 0.001039008 | |||
Cell Line | Cal27 | Tongue squamous cell carcinoma | Homo sapiens | CVCL_1107 |
Chromosome 1 putative open reading frame 220 (C1orf220) | [8] | |||
HGNC ID | HGNC:33805 | |||
Ensembl ID | ENSG00000213057 | |||
Uniprot ID | CA220_HUMAN | |||
Method | RNA-seq | GSE78040 | ||
Condition | knock down | |||
Evidence | logFC: -1.751952229; p-value: 0.017346907 | |||
Cell Line | HEK293T | Healthy | Homo sapiens | CVCL_0045 |
Chromosome 19 putative open reading frame 48 (C19orf48) | [1] | |||
HGNC ID | HGNC:29667 | |||
Ensembl ID | ENSG00000167747 | |||
Uniprot ID | CS048_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.97743731; p-value: 0.006955313 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Chromosome 22 putative open reading frame 46 (C22orf46) | [5] | |||
HGNC ID | HGNC:26294 | |||
Ensembl ID | ENSG00000184208 | |||
Uniprot ID | CV046_HUMAN | |||
Method | RNA-seq | GSE154528 | ||
Condition | knock down | |||
Evidence | logFC: 0.760241302; p-value: 0.01401234 | |||
Cell Line | 143B cell line | Osteosarcoma | Homo sapiens | CVCL_2270 |
Chromosome 5 putative open reading frame 67 (C5orf67) | [3] | |||
HGNC ID | HGNC:51252 | |||
Ensembl ID | ENSG00000225940 | |||
Uniprot ID | CE067_HUMAN | |||
Method | RNA-seq | GSE163945 | ||
Condition | knock out | |||
Evidence | logFC: -1.640541048; p-value: 0.026114307 | |||
Cell Line | Human islet-like organoids | Healthy | Homo sapiens | . |
Chromosome 8 putative open reading frame 44 (C8orf44) | [1] | |||
HGNC ID | HGNC:25646 | |||
Ensembl ID | ENSG00000288596 | |||
Uniprot ID | CH044_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.670039322; p-value: 0.034822851 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Long intergenic non-protein coding RNA 672 (LINC00672) | [1] | |||
HGNC ID | HGNC:44353 | |||
Ensembl ID | ENSG00000263874 | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.713346599; p-value: 0.000272221 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Nuclear factor, erythroid 4 (NFE4) | [1] | |||
HGNC ID | HGNC:29902 | |||
Ensembl ID | ENSG00000230257 | |||
Uniprot ID | NFE4_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: 0.627539229; p-value: 0.00505338 | |||
Cell Line | NOMO1 | Acute myeloid leukemia | Homo sapiens | CVCL_1609 |
Orofacial cleft 1 candidate 1 (OFCC1) | [7] | |||
HGNC ID | HGNC:21017 | |||
Ensembl ID | ENSG00000181355 | |||
Uniprot ID | OFCC1_HUMAN | |||
Method | RNA-seq | GSE180214 | ||
Condition | knock down | |||
Evidence | logFC: 0.846898509; p-value: 0.009761111 | |||
Cell Line | RPMI-8226 cell line | Multiple myeloma | Homo sapiens | CVCL_0014 |
Proapoptotic nucleolar protein 1 (PANO1) | [1] | |||
HGNC ID | HGNC:51237 | |||
Ensembl ID | ENSG00000288675 | |||
Uniprot ID | PANO1_HUMAN | |||
Method | RNA-seq | GSE144968 | ||
Condition | knock down | |||
Evidence | logFC: -0.81937722; p-value: 0.019280391 | |||
Cell Line | MOLM13 | Acute myeloid leukemia | Homo sapiens | CVCL_2119 |
Click to Download All Target Gene of This Genetic Class | ||||
References