m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01646)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT03233 | ||
| Epigenetic Regulator | WD repeat-containing protein 5 (WDR5) | |
| Regulated Target | Histone H3 lysine 4 trimethylation (H3K4me3) | |
| Crosstalk relationship | m6A → Histone modification | |
| Disease | Melanoma of uvea | |
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT03234 | ||
| Epigenetic Regulator | WD repeat-containing protein 5 (WDR5) | |
| Regulated Target | Histone H3 lysine 4 trimethylation (H3K4me3) | |
| Crosstalk relationship | m6A → Histone modification | |
| Disease | Melanoma of uvea | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01646)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE003314 | Click to Show/Hide the Full List | ||
| mod site | chrX:15427623-15427624:- | [2] | |
| Sequence | CTACTGTCAATAACTGTATTACTATACATGGAGTTTTCCAT | ||
| Transcript ID List | ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: RNA-editing_site_139743 | ||
N6-methyladenosine (m6A)
| In total 27 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE090682 | Click to Show/Hide the Full List | ||
| mod site | chrX:15384821-15384822:- | [3] | |
| Sequence | TTCCTGGCACATGCAAATAAACCTAATCATTGTTTCTTTAA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000380421.3; ENST00000492432.5 | ||
| External Link | RMBase: m6A_site_852802 | ||
| mod ID: M6ASITE090683 | Click to Show/Hide the Full List | ||
| mod site | chrX:15384887-15384888:- | [4] | |
| Sequence | CGGTGCTTCTAAAGAATTCCACACTAACGTGATAACATGGT | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000380421.3; ENST00000492432.5 | ||
| External Link | RMBase: m6A_site_852803 | ||
| mod ID: M6ASITE090684 | Click to Show/Hide the Full List | ||
| mod site | chrX:15385100-15385101:- | [4] | |
| Sequence | CCTAGGTCCATTTGTGATGAACACCAATGAAGAGATTTCTC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000492432.5; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852804 | ||
| mod ID: M6ASITE090685 | Click to Show/Hide the Full List | ||
| mod site | chrX:15390188-15390189:- | [4] | |
| Sequence | TTAAGAGAACCAGTTATCCAACATGGTAAGACCAAAATGAC | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000484433.1; ENST00000492432.5; ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852805 | ||
| mod ID: M6ASITE090686 | Click to Show/Hide the Full List | ||
| mod site | chrX:15390200-15390201:- | [3] | |
| Sequence | GCTGGGGAGCCATTAAGAGAACCAGTTATCCAACATGGTAA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000380421.3; ENST00000492432.5; ENST00000484433.1 | ||
| External Link | RMBase: m6A_site_852806 | ||
| mod ID: M6ASITE090687 | Click to Show/Hide the Full List | ||
| mod site | chrX:15390234-15390235:- | [5] | |
| Sequence | TTAGGATCCCAAGAGAAGCCACTTTGTCTTAATTGCTGGGG | ||
| Motif Score | 2.475107143 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000484433.1; ENST00000380421.3; ENST00000380420.10; ENST00000492432.5 | ||
| External Link | RMBase: m6A_site_852807 | ||
| mod ID: M6ASITE090688 | Click to Show/Hide the Full List | ||
| mod site | chrX:15397452-15397453:- | [3] | |
| Sequence | TGACAGTGTCCAGGTGGAGAACAAGGTAAGTATGTTATTTT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; hESC-HEK293T | ||
| Seq Type List | m6A-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000484433.1; ENST00000380421.3; ENST00000492432.5 | ||
| External Link | RMBase: m6A_site_852808 | ||
| mod ID: M6ASITE090689 | Click to Show/Hide the Full List | ||
| mod site | chrX:15397502-15397503:- | [3] | |
| Sequence | GATGCACAACAAAAAATAGAACCTCATCACACAGCAGTGCT | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000492432.5; ENST00000380420.10; ENST00000484433.1; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852809 | ||
| mod ID: M6ASITE090690 | Click to Show/Hide the Full List | ||
| mod site | chrX:15397517-15397518:- | [4] | |
| Sequence | TTTGTAGGGCCCGATGATGCACAACAAAAAATAGAACCTCA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000492432.5; ENST00000380420.10; ENST00000484433.1; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852810 | ||
| mod ID: M6ASITE090691 | Click to Show/Hide the Full List | ||
| mod site | chrX:15407531-15407532:- | [4] | |
| Sequence | AGGGTGGACAAGCTTCATTTACACGATATCTGGAGATGTGT | ||
| Motif Score | 2.07285119 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000492432.5; ENST00000380421.3; ENST00000484433.1; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852811 | ||
| mod ID: M6ASITE090692 | Click to Show/Hide the Full List | ||
| mod site | chrX:15407544-15407545:- | [3] | |
| Sequence | GCTGGTCCTTTCCAGGGTGGACAAGCTTCATTTACACGATA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000492432.5; ENST00000380421.3; ENST00000484433.1 | ||
| External Link | RMBase: m6A_site_852812 | ||
| mod ID: M6ASITE090693 | Click to Show/Hide the Full List | ||
| mod site | chrX:15407583-15407584:- | [3] | |
| Sequence | TGTTCCTTTTGGCATTATGGACACTAACATGTTAATGTTGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000492432.5; ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852813 | ||
| mod ID: M6ASITE090694 | Click to Show/Hide the Full List | ||
| mod site | chrX:15425927-15425928:- | [4] | |
| Sequence | AAATTGGACCCAGGAGCCAAACATTCCCAACCTATCCCTAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852814 | ||
| mod ID: M6ASITE090695 | Click to Show/Hide the Full List | ||
| mod site | chrX:15425940-15425941:- | [6] | |
| Sequence | ATATTTGGACTTCAAATTGGACCCAGGAGCCAAACATTCCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852815 | ||
| mod ID: M6ASITE090696 | Click to Show/Hide the Full List | ||
| mod site | chrX:15425952-15425953:- | [6] | |
| Sequence | CACACCAACCTTATATTTGGACTTCAAATTGGACCCAGGAG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852816 | ||
| mod ID: M6ASITE090697 | Click to Show/Hide the Full List | ||
| mod site | chrX:15425971-15425972:- | [4] | |
| Sequence | AGTCCAAGGTTTACACTCGCACACCAACCTTATATTTGGAC | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852817 | ||
| mod ID: M6ASITE090698 | Click to Show/Hide the Full List | ||
| mod site | chrX:15429406-15429407:- | [6] | |
| Sequence | GGTTAAAGATGTTGTGAAAAACATCTGCAAAATGAATTAAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000380421.3; ENST00000476381.5; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852818 | ||
| mod ID: M6ASITE090699 | Click to Show/Hide the Full List | ||
| mod site | chrX:15455904-15455905:- | [3] | |
| Sequence | AAAAGTGAAGAAATCCCTAAACCCAGTAAGGATGGTGTGAC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380421.3; ENST00000476381.5; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852819 | ||
| mod ID: M6ASITE090700 | Click to Show/Hide the Full List | ||
| mod site | chrX:15455928-15455929:- | [3] | |
| Sequence | GTGGAGCCTCAGTACCAGGAACTGAAAAGTGAAGAAATCCC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380420.10; ENST00000476381.5; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852820 | ||
| mod ID: M6ASITE090701 | Click to Show/Hide the Full List | ||
| mod site | chrX:15455985-15455986:- | [4] | |
| Sequence | GAGGAGCCAGCCCATGGCCTACAACTGTGGGTTAATTTGAG | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000476381.5; ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852821 | ||
| mod ID: M6ASITE090702 | Click to Show/Hide the Full List | ||
| mod site | chrX:15459689-15459690:- | [4] | |
| Sequence | GCCCATGAAGACTTCTGTGGACACACTGGTAAAATGAACCC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000476381.5; ENST00000380420.10; ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852822 | ||
| mod ID: M6ASITE090703 | Click to Show/Hide the Full List | ||
| mod site | chrX:15479746-15479747:- | [4] | |
| Sequence | GGAGGATTTCCTGATCATCCACATCGAGGTTTTGAAACAGT | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000471725.1; ENST00000380420.10; ENST00000380421.3; ENST00000476381.5 | ||
| External Link | RMBase: m6A_site_852823 | ||
| mod ID: M6ASITE090704 | Click to Show/Hide the Full List | ||
| mod site | chrX:15491279-15491280:- | [7] | |
| Sequence | CTCTACAGCTCAGCATCAGAACACTCTCTTTTTAGACTCCG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | TIME | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000380421.3; ENST00000471725.1; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852824 | ||
| mod ID: M6ASITE090705 | Click to Show/Hide the Full List | ||
| mod site | chrX:15493278-15493279:- | [4] | |
| Sequence | ACGGTGAGGCTACTGGACCCACACTCTCTTAACCTGCCCTC | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000471725.1; ENST00000380421.3; ENST00000380420.10 | ||
| External Link | RMBase: m6A_site_852825 | ||
| mod ID: M6ASITE090706 | Click to Show/Hide the Full List | ||
| mod site | chrX:15493282-15493283:- | [3] | |
| Sequence | AGTCACGGTGAGGCTACTGGACCCACACTCTCTTAACCTGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; A549 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380421.3; ENST00000380420.10; ENST00000471725.1 | ||
| External Link | RMBase: m6A_site_852826 | ||
| mod ID: M6ASITE090707 | Click to Show/Hide the Full List | ||
| mod site | chrX:15493347-15493348:- | [3] | |
| Sequence | AGGGCCTCCGAGACCCGTAGACTCCCGCCTCCCGCCTCCTC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852827 | ||
| mod ID: M6ASITE090708 | Click to Show/Hide the Full List | ||
| mod site | chrX:15493355-15493356:- | [3] | |
| Sequence | GGAGCCCCAGGGCCTCCGAGACCCGTAGACTCCCGCCTCCC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000380421.3 | ||
| External Link | RMBase: m6A_site_852828 | ||
References