General Information of the m6A Target Gene (ID: M6ATAR01450)
Target Name Procathepsin L (CTSL)
Synonyms
EC 3.4.22.15; Cathepsin L1; Major excreted protein; MEP
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Gene Name CTSL
Chromosomal Location 9q21.33
Family Peptidase C1 family
Function
Thiol protease important for the overall degradation of proteins in lysosomes (Probable). Plays a critical for normal cellular functions such as general protein turnover, antigen processing and bone remodeling. Involved in the solubilization of cross-linked TG/thyroglobulin and in the subsequent release of thyroid hormone thyroxine (T4) by limited proteolysis of TG/thyroglobulin in the thyroid follicle lumen (By similarity). In neuroendocrine chromaffin cells secretory vesicles, catalyzes the prohormone proenkephalin processing to the active enkephalin peptide neurotransmitter (By similarity). In thymus, regulates CD4(+) T cell positive selection by generating the major histocompatibility complex class II (MHCII) bound peptide ligands presented by cortical thymic epithelial cells. Also mediates invariant chain processing in cortical thymic epithelial cells (By similarity). Major elastin-degrading enzyme at neutral pH. Accumulates as a mature and active enzyme in the extracellular space of antigen presenting cells (APCs) to regulate degradation of the extracellular matrix in the course of inflammation (By similarity). Secreted form generates endostatin from COL18A1 (PubMed:10716919). Critical for cardiac morphology and function. Plays an important role in hair follicle morphogenesis and cycling, as well as epidermal differentiation (By similarity). Required for maximal stimulation of steroidogenesis by TIMP1 (By similarity).
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Gene ID 1514
Uniprot ID
CATL1_HUMAN
HGNC ID
HGNC:2537
KEGG ID
hsa:1514
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 2 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03511
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Crosstalk ID: M6ACROT03524
Epigenetic Regulator WD repeat-containing protein 5 (WDR5)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01450)
Procathepsin L (CTSL)
5-methylcytidine (m5C)
In total 4 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004406 Click to Show/Hide the Full List
mod site chr9:87726125-87726126:+ [2]
Sequence GCGAAGCTGGGCCAGAACCGCGACCTCCGCAACCTTGAGCG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000375894.9; ENST00000340342.10; ENST00000343150.10
External Link RMBase: m5C_site_43096
mod ID: M5CSITE004407 Click to Show/Hide the Full List
mod site chr9:87728020-87728021:+ [2]
Sequence AGCATCAGTTACATGTTTGCCTCTAGAATGAAGAAGGATGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000340342.10; ENST00000495822.1; ENST00000375894.9; ENST00000343150.10; ENST00000342020.5; ENST00000482054.1
External Link RMBase: m5C_site_43097
mod ID: M5CSITE004408 Click to Show/Hide the Full List
mod site chr9:87728242-87728243:+ [2]
Sequence CAACATTTTATTTCCTTTTCCTTGAAGACCAGTGAAGAATT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000495822.1; ENST00000375894.9; ENST00000482054.1; ENST00000340342.10; ENST00000343150.10; ENST00000342020.5
External Link RMBase: m5C_site_43098
mod ID: M5CSITE004409 Click to Show/Hide the Full List
mod site chr9:87731004-87731005:+ [2]
Sequence TGGAAAACCTGCTCTTTTTTCAGCTGGGGTGAAGAATGGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000375894.9; ENST00000343150.10; ENST00000340342.10; ENST00000495822.1
External Link RMBase: m5C_site_43099
N6-methyladenosine (m6A)
In total 32 m6A sequence/site(s) in this target gene
mod ID: M6ASITE088486 Click to Show/Hide the Full List
mod site chr9:87726121-87726122:+ [3]
Sequence TCAGGCGAAGCTGGGCCAGAACCGCGACCTCCGCAACCTTG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1B; hESCs; fibroblasts; H1299; MM6; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000375894.9; ENST00000343150.10; ENST00000340342.10
External Link RMBase: m6A_site_826448
mod ID: M6ASITE088487 Click to Show/Hide the Full List
mod site chr9:87726220-87726221:+ [3]
Sequence CCAGGCCCAGCTGTGGCCGGACAGGGACTGGAAGAGAGGAC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; kidney; A549; HEK293T; H1A; H1B; hESCs; fibroblasts; H1299; MM6; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000495822.1; ENST00000343150.10; ENST00000375894.9; ENST00000482054.1; ENST00000340342.10; ENST00000342020.5
External Link RMBase: m6A_site_826449
mod ID: M6ASITE088488 Click to Show/Hide the Full List
mod site chr9:87726226-87726227:+ [3]
Sequence CCAGCTGTGGCCGGACAGGGACTGGAAGAGAGGACGCGGTC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; HEK293T; H1A; H1B; hESCs; fibroblasts; H1299; MM6; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000343150.10; ENST00000375894.9; ENST00000495822.1; ENST00000342020.5; ENST00000340342.10; ENST00000482054.1
External Link RMBase: m6A_site_826450
mod ID: M6ASITE088489 Click to Show/Hide the Full List
mod site chr9:87726291-87726292:+ [3]
Sequence AACGAGAGCGTCTACCCCGAACTCTGCTGGCCTTGAGGTGG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; A549; HEK293T; H1A; H1B; fibroblasts; H1299; MM6; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482054.1; ENST00000343150.10; ENST00000340342.10; ENST00000495822.1; ENST00000375894.9; ENST00000342020.5
External Link RMBase: m6A_site_826451
mod ID: M6ASITE088490 Click to Show/Hide the Full List
mod site chr9:87726336-87726337:+ [3]
Sequence GCCGGGGAGGGCAGTTGAGGACCCCGCGGAGGCGCGTGACT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; HEK293T; H1A; H1B; MM6; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482054.1; ENST00000342020.5; ENST00000495822.1; ENST00000340342.10; ENST00000375894.9; ENST00000343150.10
External Link RMBase: m6A_site_826452
mod ID: M6ASITE088491 Click to Show/Hide the Full List
mod site chr9:87726392-87726393:+ [3]
Sequence CCAGCCTCCGAGCCGGGTGGACACAGGTACCGCAGCCAGGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; A549; hESC-HEK293T; MM6; Huh7; CD4T; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000343150.10; ENST00000342020.5; ENST00000495822.1; ENST00000340342.10; ENST00000375894.9; ENST00000482054.1
External Link RMBase: m6A_site_826453
mod ID: M6ASITE088492 Click to Show/Hide the Full List
mod site chr9:87727601-87727602:+ [4]
Sequence TTCCCTTCCTAGGTTTTAAAACATGAATCCTACACTCATCC
Motif Score 2.20572619
Cell/Tissue List HepG2; HeLa; A549; MM6; Huh7; CD4T; GSC-11; HEK293T; MSC; iSLK; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000375894.9; ENST00000342020.5; ENST00000495822.1; ENST00000482054.1; ENST00000343150.10; ENST00000340342.10
External Link RMBase: m6A_site_826454
mod ID: M6ASITE088493 Click to Show/Hide the Full List
mod site chr9:87727612-87727613:+ [5]
Sequence GGTTTTAAAACATGAATCCTACACTCATCCTTGCTGCCTTT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000495822.1; ENST00000342020.5; ENST00000343150.10; ENST00000340342.10; ENST00000482054.1; ENST00000375894.9
External Link RMBase: m6A_site_826455
mod ID: M6ASITE088494 Click to Show/Hide the Full List
mod site chr9:87727660-87727661:+ [5]
Sequence GAATTGCCTCAGCTACTCTAACATTTGATCACAGTTTAGAG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000342020.5; ENST00000340342.10; ENST00000482054.1; ENST00000343150.10; ENST00000495822.1; ENST00000375894.9
External Link RMBase: m6A_site_826456
mod ID: M6ASITE088495 Click to Show/Hide the Full List
mod site chr9:87727690-87727691:+ [4]
Sequence ACAGTTTAGAGGCACAGTGGACCAAGTGGAAGGCGATGCAC
Motif Score 3.622404762
Cell/Tissue List HepG2; A549; fibroblasts; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000343150.10; ENST00000340342.10; ENST00000482054.1; ENST00000342020.5; ENST00000495822.1; ENST00000375894.9
External Link RMBase: m6A_site_826457
mod ID: M6ASITE088496 Click to Show/Hide the Full List
mod site chr9:87728063-87728064:+ [3]
Sequence GAGAGCAGTGTGGGAGAAGAACATGAAGATGATTGAACTGC
Motif Score 2.951386905
Cell/Tissue List HeLa; A549; hESC-HEK293T; fibroblasts; Huh7
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000495822.1; ENST00000375894.9; ENST00000340342.10; ENST00000482054.1; ENST00000343150.10; ENST00000342020.5
External Link RMBase: m6A_site_826458
mod ID: M6ASITE088497 Click to Show/Hide the Full List
mod site chr9:87728079-87728080:+ [3]
Sequence AAGAACATGAAGATGATTGAACTGCACAATCAGGAATACAG
Motif Score 3.373380952
Cell/Tissue List HeLa; fibroblasts; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000340342.10; ENST00000342020.5; ENST00000375894.9; ENST00000495822.1; ENST00000343150.10; ENST00000482054.1
External Link RMBase: m6A_site_826459
mod ID: M6ASITE088498 Click to Show/Hide the Full List
mod site chr9:87728109-87728110:+ [3]
Sequence CAGGAATACAGGGAAGGGAAACACAGCTTCACAATGGCCAT
Motif Score 2.20572619
Cell/Tissue List HeLa; fibroblasts; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000482054.1; ENST00000340342.10; ENST00000343150.10; ENST00000342020.5; ENST00000495822.1; ENST00000375894.9
External Link RMBase: m6A_site_826460
mod ID: M6ASITE088499 Click to Show/Hide the Full List
mod site chr9:87728144-87728145:+ [3]
Sequence GGCCATGAACGCCTTTGGAGACATGGTAAGTGTGCTGTGGA
Motif Score 2.897386905
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000340342.10; ENST00000342020.5; ENST00000495822.1; ENST00000482054.1; ENST00000375894.9; ENST00000343150.10
External Link RMBase: m6A_site_826461
mod ID: M6ASITE088500 Click to Show/Hide the Full List
mod site chr9:87728634-87728635:+ [6]
Sequence GCTACTGGTGCTCTTGAAGGACAGATGTTCCGGAAAACTGG
Motif Score 3.643047619
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000482054.1; ENST00000375894.9; ENST00000340342.10; ENST00000342020.5; ENST00000495822.1; ENST00000343150.10
External Link RMBase: m6A_site_826462
mod ID: M6ASITE088501 Click to Show/Hide the Full List
mod site chr9:87728857-87728858:+ [3]
Sequence GCTCAGCTTTTGGAAGGTGGACACTTTAAGAGATAACAGAT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000342020.5; ENST00000340342.10; ENST00000343150.10; ENST00000375894.9; ENST00000495822.1; ENST00000482054.1
External Link RMBase: m6A_site_826463
mod ID: M6ASITE088502 Click to Show/Hide the Full List
mod site chr9:87729588-87729589:+ [7]
Sequence AAAGGAAGAATCCTGTAAGTACAATCCCAAGTATTCTGTTG
Motif Score 2.856142857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000340342.10; ENST00000495822.1; ENST00000375894.9; ENST00000482054.1; ENST00000343150.10
External Link RMBase: m6A_site_826464
mod ID: M6ASITE088503 Click to Show/Hide the Full List
mod site chr9:87729630-87729631:+ [5]
Sequence TAATGACACCGGCTTTGTGGACATCCCTAAGCAGGAGAAGG
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000495822.1; ENST00000340342.10; ENST00000375894.9; ENST00000343150.10; ENST00000482054.1
External Link RMBase: m6A_site_826465
mod ID: M6ASITE088504 Click to Show/Hide the Full List
mod site chr9:87730398-87730399:+ [3]
Sequence AGGCATTTATTTTGAGCCAGACTGTAGCAGTGAAGACATGG
Motif Score 3.319380952
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000340342.10; ENST00000343150.10; ENST00000375894.9; ENST00000495822.1
External Link RMBase: m6A_site_826466
mod ID: M6ASITE088505 Click to Show/Hide the Full List
mod site chr9:87730413-87730414:+ [3]
Sequence GCCAGACTGTAGCAGTGAAGACATGGATCATGGTGTGCTGG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; Huh7
Seq Type List m6A-seq; DART-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000375894.9; ENST00000343150.10; ENST00000495822.1; ENST00000340342.10
External Link RMBase: m6A_site_826467
mod ID: M6ASITE088506 Click to Show/Hide the Full List
mod site chr9:87730494-87730495:+ [3]
Sequence TAAATATTGGCTGGTGAAGAACAGGTATAAATTGCCAGAAA
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T; liver; fibroblasts; A549; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq
Transcript ID List ENST00000340342.10; ENST00000375894.9; ENST00000495822.1; ENST00000343150.10
External Link RMBase: m6A_site_826468
mod ID: M6ASITE088507 Click to Show/Hide the Full List
mod site chr9:87731054-87731055:+ [3]
Sequence CTACGTAAAGATGGCCAAAGACCGGAGAAACCATTGTGGAA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; fibroblasts; A549; H1299; MM6; Huh7; CD4T; GSC-11; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000375894.9; ENST00000343150.10; ENST00000340342.10; ENST00000495822.1
External Link RMBase: m6A_site_826469
mod ID: M6ASITE088508 Click to Show/Hide the Full List
mod site chr9:87731063-87731064:+ [3]
Sequence GATGGCCAAAGACCGGAGAAACCATTGTGGAATTGCCTCAG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; fibroblasts; A549; H1299; MM6; Huh7; CD4T; GSC-11; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000375894.9; ENST00000495822.1; ENST00000340342.10; ENST00000343150.10
External Link RMBase: m6A_site_826470
mod ID: M6ASITE088509 Click to Show/Hide the Full List
mod site chr9:87731131-87731132:+ [3]
Sequence GTGGACGGTGATGAGGAAGGACTTGACTGGGGATGGCGCAT
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; fibroblasts; A549; H1299; MM6; Huh7; CD4T; GSC-11; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000495822.1; ENST00000343150.10; ENST00000340342.10
External Link RMBase: m6A_site_826471
mod ID: M6ASITE088510 Click to Show/Hide the Full List
mod site chr9:87731136-87731137:+ [7]
Sequence CGGTGATGAGGAAGGACTTGACTGGGGATGGCGCATGCATG
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000495822.1; ENST00000343150.10; ENST00000340342.10
External Link RMBase: m6A_site_826472
mod ID: M6ASITE088511 Click to Show/Hide the Full List
mod site chr9:87731200-87731201:+ [5]
Sequence CAGCCCCCGCTGTGTCGGATACACACTCGAATCATTGAAGA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000340342.10; ENST00000343150.10; ENST00000495822.1
External Link RMBase: m6A_site_826473
mod ID: M6ASITE088512 Click to Show/Hide the Full List
mod site chr9:87731253-87731254:+ [7]
Sequence TTGAATTCTGTGATATTTTCACACTGGTAAATGTTACCTCT
Motif Score 2.047297619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000343150.10; ENST00000340342.10; ENST00000495822.1
External Link RMBase: m6A_site_826474
mod ID: M6ASITE088513 Click to Show/Hide the Full List
mod site chr9:87731268-87731269:+ [7]
Sequence TTTTCACACTGGTAAATGTTACCTCTATTTTAATTACTGCT
Motif Score 2.052208333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000340342.10; ENST00000495822.1; ENST00000343150.10
External Link RMBase: m6A_site_826475
mod ID: M6ASITE088514 Click to Show/Hide the Full List
mod site chr9:87731283-87731284:+ [7]
Sequence ATGTTACCTCTATTTTAATTACTGCTATAAATAGGTTTATA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000340342.10; ENST00000343150.10; ENST00000495822.1
External Link RMBase: m6A_site_826476
mod ID: M6ASITE088515 Click to Show/Hide the Full List
mod site chr9:87731314-87731315:+ [7]
Sequence TAGGTTTATATTATTGATTCACTTACTGACTTTGCATTTTC
Motif Score 2.469291667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000340342.10; ENST00000343150.10; ENST00000495822.1
External Link RMBase: m6A_site_826477
mod ID: M6ASITE088516 Click to Show/Hide the Full List
mod site chr9:87731322-87731323:+ [7]
Sequence TATTATTGATTCACTTACTGACTTTGCATTTTCGTTTTTAA
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000340342.10; ENST00000495822.1; ENST00000343150.10
External Link RMBase: m6A_site_826478
mod ID: M6ASITE088517 Click to Show/Hide the Full List
mod site chr9:87731361-87731362:+ [7]
Sequence AAAAGGATGTATAAATTTTTACCTGTTTAAATAAAATTTAA
Motif Score 2.052208333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000343150.10; ENST00000495822.1; ENST00000340342.10
External Link RMBase: m6A_site_826479