m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01018)
Target Name long intergenic non-protein coding RNA 941 (LINC00941)
Synonyms
lncRNA-MUF; lncIAPF; MSC upregulated factor
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Gene Name LINC00941
Chromosomal Location 12p11.21
Gene ID 100287314
HGNC ID
HGNC:48635
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03480
 Crosstalk Info 
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 18 lactylation (H3K18la)
Crosstalk relationship Histone modification → m6A
Disease Pancreatic cancer
 Disease Info 
Non-coding RNA
m6A Regulator: Methyltransferase-like 14 (METTL14)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05735
 Crosstalk Info 
Epigenetic Regulator Long intergenic non-protein coding RNA 941 (LINC00941)
Regulated Target Insulin like growth factor 2 mRNA binding protein 2 (IGF2BP2)
Crosstalk relationship m6A → ncRNA
Disease Pancreatic cancer
 Disease Info 
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2)
 Regulator Info 
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05736
 Crosstalk Info 
Epigenetic Regulator Long intergenic non-protein coding RNA 941 (LINC00941)
Regulated Target Insulin like growth factor 2 mRNA binding protein 2 (IGF2BP2)
Crosstalk relationship m6A → ncRNA
Disease Pancreatic cancer
 Disease Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01018)
long intergenic non-protein coding RNA 941 (LINC00941)
N6-methyladenosine (m6A)
In total 15 m6A sequence/site(s) in this target gene
mod ID: M6ASITE011373 Click to Show/Hide the Full List
mod site chr12:30795879-30795880:+ [2]
Sequence CGACTTGGAGCCAGGTCCAGACCCATCCTGGCTCCTCTCAG
Motif Score 2.876744048
Cell/Tissue List GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000650193.1; ENST00000648050.1; ENST00000650286.1; ENST00000649324.1; ENST00000648367.1; ENST00000649555.1
External Link RMBase: m6A_site_181440
mod ID: M6ASITE011374 Click to Show/Hide the Full List
mod site chr12:30799999-30800000:+ [3]
Sequence GATTATGAAAGAAGCAGTAGACTGGTATCAAGAATCAGTCA
Motif Score 3.319380952
Cell/Tissue List MSC
Seq Type List MeRIP-seq
Transcript ID List ENST00000649324.1; ENST00000650198.1; ENST00000650286.1; ENST00000648367.1; ENST00000547804.2; ENST00000650193.1; ENST00000649555.1; ENST00000649390.1; ENST00000648050.1; ENST00000649043.1; ENST00000649354.1; ENST00000550292.2; ENST00000648700.1
External Link RMBase: m6A_site_181441
mod ID: M6ASITE011375 Click to Show/Hide the Full List
mod site chr12:30801832-30801833:+ [3]
Sequence AGCAACCGTCCAACTACCAGACATTGACCATTCAGCCTTGA
Motif Score 2.897386905
Cell/Tissue List MSC
Seq Type List MeRIP-seq
Transcript ID List ENST00000649324.1; ENST00000648700.1; ENST00000649390.1; ENST00000649043.1; rmsk_3701117; ENST00000547804.2; ENST00000649555.1; ENST00000648050.1; ENST00000551972.1; ENST00000650198.1; ENST00000650286.1; ENST00000648367.1; ENST00000650193.1; ENST00000649354.1
External Link RMBase: m6A_site_181442
mod ID: M6ASITE011376 Click to Show/Hide the Full List
mod site chr12:30801853-30801854:+ [4]
Sequence CATTGACCATTCAGCCTTGAACATTCAGCACAAAGACAAAA
Motif Score 2.951386905
Cell/Tissue List HEK293A-TOA; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000551972.1; ENST00000648367.1; ENST00000650286.1; ENST00000649354.1; rmsk_3701117; ENST00000649555.1; ENST00000547804.2; ENST00000649043.1; ENST00000648700.1; ENST00000650198.1; ENST00000649390.1; ENST00000649324.1; ENST00000648050.1; ENST00000650193.1
External Link RMBase: m6A_site_181443
mod ID: M6ASITE011377 Click to Show/Hide the Full List
mod site chr12:30801868-30801869:+ [5]
Sequence CTTGAACATTCAGCACAAAGACAAAACAGACCAGACCAGAA
Motif Score 2.897386905
Cell/Tissue List fibroblasts; HEK293A-TOA; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000649555.1; ENST00000551972.1; ENST00000650193.1; ENST00000648050.1; ENST00000649324.1; ENST00000547804.2; ENST00000649043.1; ENST00000650198.1; ENST00000648367.1; ENST00000650286.1; ENST00000648700.1; ENST00000649390.1; ENST00000649354.1; rmsk_3701117
External Link RMBase: m6A_site_181444
mod ID: M6ASITE011378 Click to Show/Hide the Full List
mod site chr12:30801873-30801874:+ [5]
Sequence ACATTCAGCACAAAGACAAAACAGACCAGACCAGAAGAGTC
Motif Score 2.20572619
Cell/Tissue List fibroblasts; HEK293A-TOA; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000650286.1; ENST00000650193.1; ENST00000649324.1; ENST00000649354.1; ENST00000650198.1; ENST00000649043.1; ENST00000547804.2; ENST00000648367.1; rmsk_3701117; ENST00000648050.1; ENST00000551972.1; ENST00000649555.1; ENST00000649390.1; ENST00000648700.1
External Link RMBase: m6A_site_181445
mod ID: M6ASITE011379 Click to Show/Hide the Full List
mod site chr12:30801882-30801883:+ [5]
Sequence ACAAAGACAAAACAGACCAGACCAGAAGAGTCCCACAGAAT
Motif Score 2.876744048
Cell/Tissue List fibroblasts; HEK293A-TOA; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000650193.1; ENST00000649043.1; ENST00000649354.1; ENST00000648700.1; ENST00000648367.1; ENST00000650286.1; ENST00000547804.2; rmsk_3701117; ENST00000649555.1; ENST00000551972.1; ENST00000649324.1; ENST00000650198.1; ENST00000649390.1; ENST00000648050.1
External Link RMBase: m6A_site_181446
mod ID: M6ASITE011380 Click to Show/Hide the Full List
mod site chr12:30801910-30801911:+ [6]
Sequence AGTCCCACAGAATAGGGGAAACTATTCAGAGAAAACTTAAG
Motif Score 2.627720238
Cell/Tissue List A549; fibroblasts; GSC-11; HEK293A-TOA; MSC; TIME
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000649354.1; ENST00000649043.1; ENST00000650286.1; rmsk_3701117; ENST00000649555.1; ENST00000649324.1; ENST00000648367.1; ENST00000648050.1; ENST00000648700.1; ENST00000650198.1; ENST00000649390.1; ENST00000551972.1; ENST00000547804.2; ENST00000650193.1
External Link RMBase: m6A_site_181447
mod ID: M6ASITE011381 Click to Show/Hide the Full List
mod site chr12:30801924-30801925:+ [6]
Sequence GGGGAAACTATTCAGAGAAAACTTAAGCCACTAAGTTTTAT
Motif Score 2.627720238
Cell/Tissue List A549; fibroblasts; GSC-11; HEK293A-TOA; MSC; TIME
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000648050.1; ENST00000649555.1; ENST00000648367.1; ENST00000648700.1; ENST00000650286.1; ENST00000649043.1; ENST00000650198.1; ENST00000649354.1; ENST00000547804.2; ENST00000551972.1; ENST00000649324.1; rmsk_3701117; ENST00000650193.1; ENST00000649390.1
External Link RMBase: m6A_site_181448
mod ID: M6ASITE011382 Click to Show/Hide the Full List
mod site chr12:30801990-30801991:+ [6]
Sequence TAGGCATACTGACAATACAAACCGAAATCCTTCTAACGTAG
Motif Score 2.185083333
Cell/Tissue List A549; hESCs; fibroblasts; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000648367.1; ENST00000649390.1; ENST00000649324.1; ENST00000648700.1; ENST00000649354.1; ENST00000648050.1; ENST00000650286.1; ENST00000649043.1; ENST00000650198.1; ENST00000650193.1; ENST00000649555.1; ENST00000551972.1; ENST00000547804.2
External Link RMBase: m6A_site_181449
mod ID: M6ASITE011383 Click to Show/Hide the Full List
mod site chr12:30802014-30802015:+ [5]
Sequence AAATCCTTCTAACGTAGTGGACCTTTTCAGGCCAGCATTTT
Motif Score 3.622404762
Cell/Tissue List hESCs; fibroblasts; HEK293A-TOA; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000649043.1; ENST00000547804.2; ENST00000648050.1; ENST00000649354.1; ENST00000649555.1; ENST00000649324.1; ENST00000648367.1; ENST00000648700.1; ENST00000650286.1; ENST00000650193.1; ENST00000649390.1; ENST00000650198.1
External Link RMBase: m6A_site_181450
mod ID: M6ASITE011384 Click to Show/Hide the Full List
mod site chr12:30802045-30802046:+ [5]
Sequence CCAGCATTTTTTCCTTGAAAACCTGGAGCATGTATCCATCT
Motif Score 2.185083333
Cell/Tissue List hESCs; fibroblasts; HEK293A-TOA; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000650286.1; ENST00000648050.1; ENST00000649354.1; ENST00000650198.1; ENST00000649324.1; ENST00000648367.1; ENST00000649043.1; ENST00000649555.1; ENST00000547804.2; ENST00000648700.1; ENST00000649390.1; ENST00000650193.1
External Link RMBase: m6A_site_181451
mod ID: M6ASITE011385 Click to Show/Hide the Full List
mod site chr12:30802085-30802086:+ [7]
Sequence TTATAGCAGAGATCACTTTCACAATGTTTGGGCTCTTGATT
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000649555.1; ENST00000649324.1; ENST00000650286.1; ENST00000649043.1; ENST00000648050.1; ENST00000547804.2; ENST00000650193.1; ENST00000650198.1; ENST00000648367.1; ENST00000649390.1; ENST00000648700.1; ENST00000649354.1
External Link RMBase: m6A_site_181452
mod ID: M6ASITE011386 Click to Show/Hide the Full List
mod site chr12:30802174-30802175:+ [7]
Sequence CTGCGAATTGACTGGATTCCACACCCTTCTAATATTTTACT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000649043.1; ENST00000649324.1; ENST00000649390.1; ENST00000648367.1; ENST00000650286.1; ENST00000649555.1; ENST00000648050.1; ENST00000547804.2; ENST00000649354.1; ENST00000650193.1; ENST00000648700.1; ENST00000650198.1
External Link RMBase: m6A_site_181453
mod ID: M6ASITE011387 Click to Show/Hide the Full List
mod site chr12:30802239-30802240:+ [5]
Sequence CTTGCTGCCATGATCAATGGACCAACTATGCTTATAACCAC
Motif Score 3.622404762
Cell/Tissue List A549; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000649354.1; ENST00000650286.1; ENST00000650198.1; ENST00000649324.1; ENST00000648367.1; ENST00000547804.2; ENST00000649043.1; ENST00000649555.1; ENST00000650193.1; ENST00000648700.1; ENST00000649390.1; ENST00000648050.1
External Link RMBase: m6A_site_181454