General Information of the m6A Target Gene (ID: M6ATAR00980)
Target Name Long intergenic non-protein coding RNA 426 (LINC00426)
Gene Name LINC00426
Chromosomal Location 13q12.3
Gene ID 100188949
HGNC ID
HGNC:42761
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 6 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03513
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Drug Cisplatin
Crosstalk ID: M6ACROT03514
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Drug Bleomycin
Crosstalk ID: M6ACROT03515
Epigenetic Regulator Histone acetyltransferase p300 (P300)
Regulated Target Histone H3 lysine 27 acetylation (H3K27ac)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Drug Imatinib
Crosstalk ID: M6ACROT03526
Epigenetic Regulator WD repeat-containing protein 5 (WDR5)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Drug Cisplatin
Crosstalk ID: M6ACROT03527
Epigenetic Regulator WD repeat-containing protein 5 (WDR5)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Drug Bleomycin
Crosstalk ID: M6ACROT03528
Epigenetic Regulator WD repeat-containing protein 5 (WDR5)
Regulated Target Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship Histone modification → m6A
Disease Cervical cancer
Drug Imatinib
Non-coding RNA
m6A Regulator: Methyltransferase-like 3 (METTL3)
In total 3 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05713
Epigenetic Regulator Long intergenic non-protein coding RNA 426 (LINC00426)
Regulated Target hsa-miR-200a-3p
Crosstalk relationship m6A → ncRNA
Disease Cervical cancer
Drug Cisplatin
Crosstalk ID: M6ACROT05714
Epigenetic Regulator Long intergenic non-protein coding RNA 426 (LINC00426)
Regulated Target hsa-miR-200a-3p
Crosstalk relationship m6A → ncRNA
Disease Cervical cancer
Drug Bleomycin
Crosstalk ID: M6ACROT05715
Epigenetic Regulator Long intergenic non-protein coding RNA 426 (LINC00426)
Regulated Target hsa-miR-200a-3p
Crosstalk relationship m6A → ncRNA
Disease Cervical cancer
Drug imatinib
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00980)
Long intergenic non-protein coding RNA 426 (LINC00426)
Adenosine-to-Inosine editing (A-to-I)
In total 38 m6A sequence/site(s) in this target gene
mod ID: A2ISITE005986 Click to Show/Hide the Full List
mod site chr13:30343775-30343776:- [2]
Sequence AGCTGGGTGTGTTGCTGTGCACCTGTAGTCCTAACTACTCA
Transcript ID List ENST00000447147.5; ENST00000417079.5; ENST00000420210.5; rmsk_3977743
External Link RMBase: RNA-editing_site_34553
mod ID: A2ISITE005987 Click to Show/Hide the Full List
mod site chr13:30343795-30343796:- [2]
Sequence CTACAAAAAATACAAAAATTAGCTGGGTGTGTTGCTGTGCA
Transcript ID List ENST00000420210.5; ENST00000447147.5; rmsk_3977743; ENST00000417079.5
External Link RMBase: RNA-editing_site_34554
mod ID: A2ISITE005988 Click to Show/Hide the Full List
mod site chr13:30344219-30344220:- [2]
Sequence GACCTCTAACTCTTGACCTCAGGTGATCCACCTGCCTCGAT
Transcript ID List ENST00000447147.5; ENST00000420210.5; ENST00000417079.5
External Link RMBase: RNA-editing_site_34555
mod ID: A2ISITE005989 Click to Show/Hide the Full List
mod site chr13:30344244-30344245:- [2]
Sequence GGGGTTTCGCCATGTTGGCCAGGCTGACCTCTAACTCTTGA
Transcript ID List ENST00000420210.5; ENST00000417079.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34556
mod ID: A2ISITE005990 Click to Show/Hide the Full List
mod site chr13:30344335-30344336:- [2]
Sequence TCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGAT
Transcript ID List ENST00000447147.5; ENST00000420210.5; ENST00000417079.5
External Link RMBase: RNA-editing_site_34557
mod ID: A2ISITE005991 Click to Show/Hide the Full List
mod site chr13:30344376-30344377:- [2]
Sequence ATGTGCTCTCAGCTCCGCTCAGCAACCTCTGCCTCCCAGAT
Transcript ID List ENST00000417079.5; ENST00000447147.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34558
mod ID: A2ISITE005992 Click to Show/Hide the Full List
mod site chr13:30347817-30347818:- [2]
Sequence GGCTGGAATGCAGTGGCACAATCATAGCCTACTGCAGCCTT
Transcript ID List ENST00000417079.5; ENST00000420210.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34559
mod ID: A2ISITE005993 Click to Show/Hide the Full List
mod site chr13:30347830-30347831:- [2]
Sequence GCTCTGTCACCCAGGCTGGAATGCAGTGGCACAATCATAGC
Transcript ID List ENST00000447147.5; ENST00000420210.5; ENST00000417079.5
External Link RMBase: RNA-editing_site_34560
mod ID: A2ISITE005994 Click to Show/Hide the Full List
mod site chr13:30348208-30348209:- [3]
Sequence AGAGGCTGCAGTGAGCTGAGATCGTGCCATTGCACTCCAGC
Transcript ID List ENST00000417079.5; rmsk_3977754; ENST00000447147.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34561
mod ID: A2ISITE005995 Click to Show/Hide the Full List
mod site chr13:30348210-30348211:- [3]
Sequence GCAGAGGCTGCAGTGAGCTGAGATCGTGCCATTGCACTCCA
Transcript ID List ENST00000420210.5; ENST00000447147.5; rmsk_3977754; ENST00000417079.5
External Link RMBase: RNA-editing_site_34562
mod ID: A2ISITE005996 Click to Show/Hide the Full List
mod site chr13:30349320-30349321:- [3]
Sequence ACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGTGTGG
Transcript ID List ENST00000420210.5; ENST00000447147.5; ENST00000417079.5; rmsk_3977757
External Link RMBase: RNA-editing_site_34563
mod ID: A2ISITE005997 Click to Show/Hide the Full List
mod site chr13:30349479-30349480:- [2]
Sequence AGACCTACCTAGTTACTTTTAATTGCAATTAAAGTGATTAA
Transcript ID List ENST00000420210.5; ENST00000417079.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34564
mod ID: A2ISITE005998 Click to Show/Hide the Full List
mod site chr13:30350176-30350177:- [2]
Sequence TCCCAAGTAGCTGGGAATAAAGGCGCCTGCCACCACACCGG
Transcript ID List ENST00000417079.5; ENST00000447147.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34565
mod ID: A2ISITE005999 Click to Show/Hide the Full List
mod site chr13:30350177-30350178:- [2]
Sequence CTCCCAAGTAGCTGGGAATAAAGGCGCCTGCCACCACACCG
Transcript ID List ENST00000447147.5; ENST00000417079.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34566
mod ID: A2ISITE006000 Click to Show/Hide the Full List
mod site chr13:30350213-30350214:- [2]
Sequence CCACCTTCTGGGTTCAAGCAATTGTCCTGTCTCAGCCTCCC
Transcript ID List ENST00000417079.5; ENST00000420210.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34567
mod ID: A2ISITE006001 Click to Show/Hide the Full List
mod site chr13:30350214-30350215:- [2]
Sequence TCCACCTTCTGGGTTCAAGCAATTGTCCTGTCTCAGCCTCC
Transcript ID List ENST00000447147.5; ENST00000420210.5; ENST00000417079.5
External Link RMBase: RNA-editing_site_34568
mod ID: A2ISITE006002 Click to Show/Hide the Full List
mod site chr13:30350289-30350290:- [2]
Sequence TTTTTTGGGATTTTTGTTTGAGATGGAGTTTCACTCTGTCG
Transcript ID List ENST00000447147.5; ENST00000417079.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34569
mod ID: A2ISITE006003 Click to Show/Hide the Full List
mod site chr13:30350367-30350368:- [2]
Sequence TTGCTAGCAATACAGTTGCTAGGACAAGGTGGTAACAGTAC
Transcript ID List ENST00000420210.5; ENST00000417079.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34570
mod ID: A2ISITE006004 Click to Show/Hide the Full List
mod site chr13:30350418-30350419:- [2]
Sequence GATTGGGCAGAAGGAGACTGATACAGTTACTGCCTTGTCCC
Transcript ID List ENST00000417079.5; ENST00000447147.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34571
mod ID: A2ISITE006005 Click to Show/Hide the Full List
mod site chr13:30352773-30352774:- [2]
Sequence TGCTTGAGACCAGGAGTTCAAGACCAGCCTGGGCAACATAG
Transcript ID List rmsk_3977768; ENST00000417079.5; ENST00000447147.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34572
mod ID: A2ISITE006006 Click to Show/Hide the Full List
mod site chr13:30356687-30356688:- [2]
Sequence TCAAGCCATCCTCCCACCTCAGCCTCTCAAGTAGCTGGGAC
Transcript ID List ENST00000447147.5; ENST00000417079.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34573
mod ID: A2ISITE006007 Click to Show/Hide the Full List
mod site chr13:30356700-30356701:- [4]
Sequence TGAACTACTGGGCTCAAGCCATCCTCCCACCTCAGCCTCTC
Transcript ID List ENST00000447147.5; ENST00000417079.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34574
mod ID: A2ISITE006008 Click to Show/Hide the Full List
mod site chr13:30356705-30356706:- [4]
Sequence AGCCTTGAACTACTGGGCTCAAGCCATCCTCCCACCTCAGC
Transcript ID List ENST00000417079.5; ENST00000420210.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34575
mod ID: A2ISITE006009 Click to Show/Hide the Full List
mod site chr13:30356775-30356776:- [4]
Sequence TTGGCCATTTTTAATTTAAGAGACAGAGTCTCGCTTTGTTA
Transcript ID List ENST00000420210.5; ENST00000447147.5; ENST00000417079.5
External Link RMBase: RNA-editing_site_34576
mod ID: A2ISITE006010 Click to Show/Hide the Full List
mod site chr13:30356778-30356779:- [3]
Sequence CTCTTGGCCATTTTTAATTTAAGAGACAGAGTCTCGCTTTG
Transcript ID List ENST00000420210.5; ENST00000417079.5; ENST00000447147.5
External Link RMBase: RNA-editing_site_34577
mod ID: A2ISITE006011 Click to Show/Hide the Full List
mod site chr13:30357311-30357312:- [2]
Sequence TCCTAGCACTTTGGGAGGCCAAGGCAGGAGGATCACTTGAG
Transcript ID List ENST00000417079.5; ENST00000447147.5; rmsk_3977778; ENST00000420210.5; ENST00000429808.5
External Link RMBase: RNA-editing_site_34578
mod ID: A2ISITE006012 Click to Show/Hide the Full List
mod site chr13:30357349-30357350:- [3]
Sequence AAGGATTTGGGGCTGGGCACAGTGGCTCGTGCCTGTAATCC
Transcript ID List ENST00000429808.5; ENST00000447147.5; rmsk_3977778; ENST00000417079.5; ENST00000420210.5
External Link RMBase: RNA-editing_site_34579
mod ID: A2ISITE006013 Click to Show/Hide the Full List
mod site chr13:30358181-30358182:- [2]
Sequence TTTGCCATGTGGCCCAGGCTAGTCTCAAACTCCTGGGCTCA
Transcript ID List ENST00000450327.5; ENST00000420219.5; ENST00000417079.5; ENST00000420210.5; ENST00000447147.5; ENST00000429808.5
External Link RMBase: RNA-editing_site_34580
mod ID: A2ISITE006014 Click to Show/Hide the Full List
mod site chr13:30361564-30361565:- [3]
Sequence CTGCCTCAGCCACTCAAGTAACTGGGACTACAGGTGTGCGC
Transcript ID List ENST00000417079.5; ENST00000420219.5; ENST00000447147.5; ENST00000429808.5; ENST00000420210.5; ENST00000450327.5
External Link RMBase: RNA-editing_site_34581
mod ID: A2ISITE006015 Click to Show/Hide the Full List
mod site chr13:30366742-30366743:- [2]
Sequence GAGGCCGAAGTGGGTGGGTCACTTGAGGTCAGGAGTTTGAG
Transcript ID List ENST00000447147.5; ENST00000420210.5; ENST00000450327.5; rmsk_3977800; ENST00000452659.5; ENST00000420219.5
External Link RMBase: RNA-editing_site_34582
mod ID: A2ISITE006016 Click to Show/Hide the Full List
mod site chr13:30366800-30366801:- [2]
Sequence ATCAAGAAGCATTCTTGGCCAGGTGCAGTGCCTCACACCTG
Transcript ID List ENST00000447147.5; rmsk_3977800; ENST00000420210.5; ENST00000450327.5; ENST00000420219.5; ENST00000452659.5
External Link RMBase: RNA-editing_site_34583
mod ID: A2ISITE006017 Click to Show/Hide the Full List
mod site chr13:30367509-30367510:- [2]
Sequence GGTTTCAAACTCCTGACCTCAGGCGATCCGCCCTCCTTGGC
Transcript ID List ENST00000450327.5; ENST00000420210.5; ENST00000420219.5; ENST00000447147.5; ENST00000452659.5
External Link RMBase: RNA-editing_site_34584
mod ID: A2ISITE006018 Click to Show/Hide the Full List
mod site chr13:30367534-30367535:- [2]
Sequence GGGGTTTCACCATACTGGCCAGGCCGGTTTCAAACTCCTGA
Transcript ID List ENST00000420219.5; ENST00000447147.5; ENST00000420210.5; ENST00000450327.5; ENST00000452659.5
External Link RMBase: RNA-editing_site_34585
mod ID: A2ISITE006019 Click to Show/Hide the Full List
mod site chr13:30367541-30367542:- [2]
Sequence TGGAGATGGGGTTTCACCATACTGGCCAGGCCGGTTTCAAA
Transcript ID List ENST00000420210.5; ENST00000447147.5; ENST00000420219.5; ENST00000452659.5; ENST00000450327.5
External Link RMBase: RNA-editing_site_34586
mod ID: A2ISITE006020 Click to Show/Hide the Full List
mod site chr13:30367576-30367577:- [2]
Sequence AGCACCATCATGCCTGGCTAATTTTGTATTTTTAGTGGAGA
Transcript ID List ENST00000450327.5; ENST00000452659.5; ENST00000420210.5; ENST00000447147.5; ENST00000420219.5
External Link RMBase: RNA-editing_site_34587
mod ID: A2ISITE006021 Click to Show/Hide the Full List
mod site chr13:30367617-30367618:- [2]
Sequence TTCTTCTGCTTCAGCGTCCCAAGTAGCTGGGATTACAGGTG
Transcript ID List ENST00000452659.5; ENST00000420210.5; ENST00000450327.5; ENST00000447147.5; ENST00000420219.5
External Link RMBase: RNA-editing_site_34588
mod ID: A2ISITE006022 Click to Show/Hide the Full List
mod site chr13:30367638-30367639:- [2]
Sequence CCGCCTCCCGGGTTCAAGCAATTCTTCTGCTTCAGCGTCCC
Transcript ID List ENST00000450327.5; ENST00000447147.5; ENST00000452659.5; ENST00000420210.5; ENST00000420219.5
External Link RMBase: RNA-editing_site_34589
mod ID: A2ISITE006023 Click to Show/Hide the Full List
mod site chr13:30367686-30367687:- [2]
Sequence GTCGCCCAGCCTAGAGTGCAATGGCGCTATTTCGGCTCATT
Transcript ID List ENST00000447147.5; ENST00000450327.5; ENST00000420219.5; ENST00000452659.5
External Link RMBase: RNA-editing_site_34590
N6-methyladenosine (m6A)
In total 9 m6A sequence/site(s) in this target gene
mod ID: M6ASITE016611 Click to Show/Hide the Full List
mod site chr13:30341444-30341445:- [5]
Sequence TCTCGGCCAAGAAGACAGGGACAAGCTCCCAACTCTGACTA
Motif Score 3.643047619
Cell/Tissue List GM12878
Seq Type List m6A-seq
Transcript ID List ENST00000420210.5; ENST00000447147.5
External Link RMBase: m6A_site_223671
mod ID: M6ASITE016612 Click to Show/Hide the Full List
mod site chr13:30341450-30341451:- [5]
Sequence TAGGAATCTCGGCCAAGAAGACAGGGACAAGCTCCCAACTC
Motif Score 2.897386905
Cell/Tissue List GM12878
Seq Type List m6A-seq
Transcript ID List ENST00000447147.5; ENST00000420210.5
External Link RMBase: m6A_site_223672
mod ID: M6ASITE016613 Click to Show/Hide the Full List
mod site chr13:30341505-30341506:- [5]
Sequence GGACCACCTGATGCAGAGAAACCTGTGACCTGAAAAAGTCT
Motif Score 2.185083333
Cell/Tissue List GM12878
Seq Type List m6A-seq
Transcript ID List ENST00000420210.5; ENST00000447147.5
External Link RMBase: m6A_site_223673
mod ID: M6ASITE016614 Click to Show/Hide the Full List
mod site chr13:30341523-30341524:- [5]
Sequence GAAACTGAGCGAGACTCCGGACCACCTGATGCAGAGAAACC
Motif Score 3.622404762
Cell/Tissue List GM12878
Seq Type List m6A-seq
Transcript ID List ENST00000447147.5; ENST00000420210.5
External Link RMBase: m6A_site_223674
mod ID: M6ASITE016615 Click to Show/Hide the Full List
mod site chr13:30341530-30341531:- [5]
Sequence ATTTATAGAAACTGAGCGAGACTCCGGACCACCTGATGCAG
Motif Score 3.319380952
Cell/Tissue List GM12878
Seq Type List m6A-seq
Transcript ID List ENST00000420210.5; ENST00000447147.5
External Link RMBase: m6A_site_223675
mod ID: M6ASITE016616 Click to Show/Hide the Full List
mod site chr13:30341540-30341541:- [5]
Sequence AAACGGCCTGATTTATAGAAACTGAGCGAGACTCCGGACCA
Motif Score 2.627720238
Cell/Tissue List GM12878
Seq Type List m6A-seq
Transcript ID List ENST00000447147.5; ENST00000420210.5
External Link RMBase: m6A_site_223676
mod ID: M6ASITE016617 Click to Show/Hide the Full List
mod site chr13:30365678-30365679:- [6]
Sequence AAGAGCAAGGATGTGTTGGGACAGGAAATGAAGACGAGATT
Motif Score 3.643047619
Cell/Tissue List LCLs
Seq Type List m6A-seq
Transcript ID List ENST00000450327.5; ENST00000420219.5; ENST00000420210.5; ENST00000417079.5; ENST00000452659.5; ENST00000447147.5
External Link RMBase: m6A_site_223677
mod ID: M6ASITE016618 Click to Show/Hide the Full List
mod site chr13:30373013-30373014:- [7]
Sequence CAGCCTCCTGAGTAGCTGGGACAACAGGCACCTGCCACCAC
Motif Score 3.643047619
Cell/Tissue List peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000447147.5; ENST00000444319.1; ENST00000452659.5; ENST00000420219.5
External Link RMBase: m6A_site_223678
mod ID: M6ASITE016619 Click to Show/Hide the Full List
mod site chr13:30373787-30373788:- [7]
Sequence GGAGGAAGCTGGAGGTCAGGACACAGGTAGGGCCTGGGTTT
Motif Score 3.643047619
Cell/Tissue List peripheral-blood
Seq Type List m6A-seq
Transcript ID List ENST00000447147.5; ENST00000420219.5; ENST00000444319.1
External Link RMBase: m6A_site_223679