m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00764)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
G6PD
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Fat mass and obesity-associated protein (FTO) [ERASER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | Targeting FTO significantly suppresses cancer cell growth and enhances chemotherapy sensitivity, which not only mediating the balance of intracellular ROS by regulating Glucose-6-phosphate dehydrogenase (G6PD) expression, but also maintaining genome instability by regulating PARP1 expression. These findings shed light on new molecular mechanisms of CRC development and treatments mediated by m6A modification. | |||
| Target Regulation | Up regulation | |||
| Responsed Disease | Colorectal cancer | ICD-11: 2B91 | ||
| Pathway Response | Glutathione metabolism | hsa00480 | ||
| In-vitro Model | LoVo | Colon adenocarcinoma | Homo sapiens | CVCL_0399 |
| HCT 116 | Colon carcinoma | Homo sapiens | CVCL_0291 | |
| HCT 8 | Colon adenocarcinoma | Homo sapiens | CVCL_2478 | |
| SW620 | Colon adenocarcinoma | Homo sapiens | CVCL_0547 | |
| In-vivo Model | For CDX model, nude mice (female, 4-6-week-old) were subcutaneously injected with 5 × 106 HCT116 cells on the both flank. For PDX model, the patient tumors were divided into small pieces and then inoculated on both flank of nude mice. For knockdown FTO mice model, FTO mice model, two weeks after inoculation, the shFTO#3 lenti-virus injected into the tumor for three consecutive days. For combined medication mice model, intraperitoneal injection of Rhein and Olaparib was started one week after inoculation. | |||
Colorectal cancer [ICD-11: 2B91]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | Targeting FTO significantly suppresses cancer cell growth and enhances chemotherapy sensitivity, which not only mediating the balance of intracellular ROS by regulating Glucose-6-phosphate dehydrogenase (G6PD) expression, but also maintaining genome instability by regulating PARP1 expression. These findings shed light on new molecular mechanisms of CRC development and treatments mediated by m6A modification. | |||
| Responsed Disease | Colorectal cancer [ICD-11: 2B91] | |||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | Glutathione metabolism | hsa00480 | ||
| In-vitro Model | LoVo | Colon adenocarcinoma | Homo sapiens | CVCL_0399 |
| HCT 116 | Colon carcinoma | Homo sapiens | CVCL_0291 | |
| HCT 8 | Colon adenocarcinoma | Homo sapiens | CVCL_2478 | |
| SW620 | Colon adenocarcinoma | Homo sapiens | CVCL_0547 | |
| In-vivo Model | For CDX model, nude mice (female, 4-6-week-old) were subcutaneously injected with 5 × 106 HCT116 cells on the both flank. For PDX model, the patient tumors were divided into small pieces and then inoculated on both flank of nude mice. For knockdown FTO mice model, FTO mice model, two weeks after inoculation, the shFTO#3 lenti-virus injected into the tumor for three consecutive days. For combined medication mice model, intraperitoneal injection of Rhein and Olaparib was started one week after inoculation. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Histone modification
m6A Regulator: Fat mass and obesity-associated protein (FTO)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT03444 | ||
| Epigenetic Regulator | Histone deacetylase 1 (HDAC1) | |
| Regulated Target | Histone H3 lysine 27 acetylation (H3K27ac) | |
| Crosstalk relationship | Histone modification → m6A | |
| Disease | Colorectal cancer | |
Non-coding RNA
m6A Regulator: Heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05220 | ||
| Epigenetic Regulator | Long intergenic non-protein coding RNA 1615 (LINC01615) | |
| Regulated Target | Heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1) | |
| Crosstalk relationship | ncRNA → m6A | |
| Disease | Colorectal cancer | |
| Drug | Oxaliplatin | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00764)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE003948 | Click to Show/Hide the Full List | ||
| mod site | chrX:154538157-154538158:- | [4] | |
| Sequence | TACAAAAAATACAAAAAATTAGCTGGGTGTGTTGGCATGTA | ||
| Transcript ID List | ENST00000369620.6; ENST00000439227.5; rmsk_3171781; ENST00000433845.1; ENST00000440967.5; ENST00000497281.5; ENST00000393564.6; ENST00000488434.1; ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: RNA-editing_site_143722 | ||
5-methylcytidine (m5C)
| In total 4 m6A sequence/site(s) in this target gene | |||
| mod ID: M5CSITE004640 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531768-154531769:- | [5] | |
| Sequence | ACCCTGCCTGAGCCCAGGAGCTGAGTCACCTCCTCCACTCA | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8 | ||
| External Link | RMBase: m5C_site_45726 | ||
| mod ID: M5CSITE004641 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531891-154531892:- | [5] | |
| Sequence | CTCAGCTGCACATTCCTGGCCCCGGGCTCTGGCCACCCTGG | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8 | ||
| External Link | RMBase: m5C_site_45727 | ||
| mod ID: M5CSITE004642 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546832-154546833:- | [5] | |
| Sequence | AGCCCCCGGAAACGGTCGTACACTTCGGGGCTGCGAGCGCG | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000621232.5; ENST00000647501.1; ENST00000440967.5; ENST00000369620.6; ENST00000439227.5; ENST00000393562.8 | ||
| External Link | RMBase: m5C_site_45728 | ||
| mod ID: M5CSITE004643 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546836-154546837:- | [5] | |
| Sequence | GCTCAGCCCCCGGAAACGGTCGTACACTTCGGGGCTGCGAG | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000439227.5; ENST00000621232.5; ENST00000647501.1; ENST00000440967.5; ENST00000393564.6; ENST00000393562.8 | ||
| External Link | RMBase: m5C_site_45729 | ||
N6-methyladenosine (m6A)
| In total 52 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE094044 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531395-154531396:- | [6] | |
| Sequence | CCCTGCCATTAAATCCGCAAACAGCCCCTCCTGTCCCCTTG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; hESC-HEK293T; U2OS; LCLs; MT4; A549; MM6; Huh7 | ||
| Seq Type List | m6A-seq; MAZTER-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878278 | ||
| mod ID: M6ASITE094045 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531434-154531435:- | [6] | |
| Sequence | AAGCAGACGCAGCAGCTGGGACCCCTCCCAACCTCAATGCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; U2OS; LCLs; MT4; A549; MM6; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878279 | ||
| mod ID: M6ASITE094046 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531547-154531548:- | [7] | |
| Sequence | GACATTCCTTGTCACCAGCAACATCTCGAGCCCCCTGGATG | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878280 | ||
| mod ID: M6ASITE094047 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531566-154531567:- | [7] | |
| Sequence | GCCAGCCTCAGTGCCACTTGACATTCCTTGTCACCAGCAAC | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878281 | ||
| mod ID: M6ASITE094048 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531644-154531645:- | [7] | |
| Sequence | GGCCAGGGTGGGAGGGAGGGACGAGGGGGAGGAAAGGGGCG | ||
| Motif Score | 3.616982143 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878282 | ||
| mod ID: M6ASITE094049 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531788-154531789:- | [6] | |
| Sequence | GACCATCCTGGCCCCTCCAGACCCTGCCTGAGCCCAGGAGC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; A549; MM6; peripheral-blood; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878283 | ||
| mod ID: M6ASITE094050 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531807-154531808:- | [6] | |
| Sequence | TCAGCTGCCAAGCACTCGAGACCATCCTGGCCCCTCCAGAC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; A549; MM6; peripheral-blood; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878284 | ||
| mod ID: M6ASITE094051 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531834-154531835:- | [7] | |
| Sequence | GCTACTACCCGAGCCCAGCTACATTCCTCAGCTGCCAAGCA | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878285 | ||
| mod ID: M6ASITE094052 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531902-154531903:- | [7] | |
| Sequence | GGACCATTGACCTCAGCTGCACATTCCTGGCCCCGGGCTCT | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878286 | ||
| mod ID: M6ASITE094053 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531920-154531921:- | [6] | |
| Sequence | CGAGTCGGGAGGACTCCGGGACCATTGACCTCAGCTGCACA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; MM6; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878287 | ||
| mod ID: M6ASITE094054 | Click to Show/Hide the Full List | ||
| mod site | chrX:154531928-154531929:- | [6] | |
| Sequence | CCCGACCCCGAGTCGGGAGGACTCCGGGACCATTGACCTCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; A549; MM6; Huh7; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878288 | ||
| mod ID: M6ASITE094055 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532009-154532010:- | [7] | |
| Sequence | CTACAAGTGGGTGAACCCCCACAAGCTCTGAGCCCTGGGCA | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000621232.5; ENST00000393562.8; ENST00000369620.6 | ||
| External Link | RMBase: m6A_site_878289 | ||
| mod ID: M6ASITE094056 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532015-154532016:- | [8] | |
| Sequence | GGGCACCTACAAGTGGGTGAACCCCCACAAGCTCTGAGCCC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; MT4; A549 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000393562.8; ENST00000369620.6; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878290 | ||
| mod ID: M6ASITE094057 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532027-154532028:- | [7] | |
| Sequence | TTTCCAGTATGAGGGCACCTACAAGTGGGTGAACCCCCACA | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000369620.6; ENST00000393562.8; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878291 | ||
| mod ID: M6ASITE094058 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532570-154532571:- | [7] | |
| Sequence | CCTGACCTACGGCAACAGATACAAGGTGCCCTACAGAGAAG | ||
| Motif Score | 2.110482143 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000369620.6; ENST00000393562.8; ENST00000621232.5; ENST00000490651.1 | ||
| External Link | RMBase: m6A_site_878292 | ||
| mod ID: M6ASITE094059 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532582-154532583:- | [9] | |
| Sequence | GTCGGAGCTGGACCTGACCTACGGCAACAGATACAAGGTGC | ||
| Motif Score | 2.05260119 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000490651.1; ENST00000369620.6; ENST00000621232.5; ENST00000393562.8; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878293 | ||
| mod ID: M6ASITE094060 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532591-154532592:- | [6] | |
| Sequence | CCCCGAGGAGTCGGAGCTGGACCTGACCTACGGCAACAGAT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; A549; MM6; Huh7; peripheral-blood; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000490651.1; ENST00000393564.6; ENST00000369620.6; ENST00000393562.8; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878294 | ||
| mod ID: M6ASITE094061 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532651-154532652:- | [7] | |
| Sequence | GCAGCCCAACGAGGCCGTGTACACCAAGATGATGACCAAGA | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000621232.5; ENST00000490651.1; ENST00000393564.6; ENST00000369620.6 | ||
| External Link | RMBase: m6A_site_878295 | ||
| mod ID: M6ASITE094062 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532717-154532718:- | [10] | |
| Sequence | GTTCCATGATGTGGCCGGCGACATCTTCCACCAGCAGTGCA | ||
| Motif Score | 2.865571429 | ||
| Cell/Tissue List | brain; HEK293; hESC-HEK293T | ||
| Seq Type List | m6A-REF-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393564.6; ENST00000393562.8; ENST00000369620.6; ENST00000490651.1 | ||
| External Link | RMBase: m6A_site_878296 | ||
| mod ID: M6ASITE094063 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532865-154532866:- | [6] | |
| Sequence | GCACTGGAGCTCCCACTGAGACACTCACGCACTGGTCCACA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; peripheral-blood; endometrial; NB4 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000393564.6; ENST00000621232.5; ENST00000490651.1; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878297 | ||
| mod ID: M6ASITE094064 | Click to Show/Hide the Full List | ||
| mod site | chrX:154532907-154532908:- | [6] | |
| Sequence | TCGAGGCCCAGCAAGGCAGAACTGGGCATGCCCTGTGTGCG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000490651.1; ENST00000393562.8; ENST00000621232.5; ENST00000369620.6 | ||
| External Link | RMBase: m6A_site_878298 | ||
| mod ID: M6ASITE094065 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533060-154533061:- | [6] | |
| Sequence | CCTGGGCCAGTACGTGGGGAACCCCGATGGAGAGGGCGAGG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000440967.5; ENST00000439227.5; ENST00000621232.5; ENST00000393562.8; ENST00000490651.1; ENST00000369620.6; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878299 | ||
| mod ID: M6ASITE094066 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533090-154533091:- | [7] | |
| Sequence | CATCTCAGAGGTGCAGGCCAACAATGTGGTCCTGGGCCAGT | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000621232.5; ENST00000393562.8; ENST00000439227.5; ENST00000440967.5; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878300 | ||
| mod ID: M6ASITE094067 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533654-154533655:- | [6] | |
| Sequence | CCCCAGGGACGTGATGCAGAACCACCTACTGCAGATGCTGT | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000439227.5; ENST00000621232.5; ENST00000489497.1; ENST00000440967.5; ENST00000393562.8; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878301 | ||
| mod ID: M6ASITE094068 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533713-154533714:- | [6] | |
| Sequence | CATGCCCTTGAACCAGGTGAACAGGGCGGGGAGCTAAGGCG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000439227.5; ENST00000369620.6; ENST00000393562.8; ENST00000621232.5; ENST00000489497.1; ENST00000440967.5 | ||
| External Link | RMBase: m6A_site_878302 | ||
| mod ID: M6ASITE094069 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533722-154533723:- | [6] | |
| Sequence | TGGGGTCCCCATGCCCTTGAACCAGGTGAACAGGGCGGGGA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000439227.5; ENST00000489497.1; ENST00000621232.5; ENST00000393562.8; ENST00000369620.6; ENST00000440967.5; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878303 | ||
| mod ID: M6ASITE094070 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533794-154533795:- | [6] | |
| Sequence | GATTTAAGGGGACCTGGAAGACAAGGGGGATCAGGAAGTGA | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000439227.5; ENST00000440967.5; ENST00000393562.8; ENST00000393564.6; ENST00000369620.6; ENST00000489497.1; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878304 | ||
| mod ID: M6ASITE094071 | Click to Show/Hide the Full List | ||
| mod site | chrX:154533803-154533804:- | [6] | |
| Sequence | TCCTTCCTTGATTTAAGGGGACCTGGAAGACAAGGGGGATC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000393562.8; ENST00000621232.5; ENST00000439227.5; ENST00000489497.1; ENST00000393564.6; ENST00000440967.5 | ||
| External Link | RMBase: m6A_site_878305 | ||
| mod ID: M6ASITE094072 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534121-154534122:- | [6] | |
| Sequence | CGGCCCCATCTGGAACCGGGACAACATCGCCTGCGTTATCC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8; ENST00000440967.5; ENST00000393564.6; ENST00000369620.6; ENST00000433845.1; ENST00000489497.1; ENST00000439227.5 | ||
| External Link | RMBase: m6A_site_878306 | ||
| mod ID: M6ASITE094073 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534127-154534128:- | [6] | |
| Sequence | GATCTTCGGCCCCATCTGGAACCGGGACAACATCGCCTGCG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000489497.1; ENST00000369620.6; ENST00000439227.5; ENST00000433845.1; ENST00000393564.6; ENST00000393562.8; ENST00000440967.5; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878307 | ||
| mod ID: M6ASITE094074 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534352-154534353:- | [6] | |
| Sequence | GGGCAAGGAGATGGTGCAGAACCTCATGGTGCTGAGGTGGG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393564.6; ENST00000369620.6; ENST00000621232.5; ENST00000439227.5; ENST00000433845.1; ENST00000393562.8; ENST00000440967.5 | ||
| External Link | RMBase: m6A_site_878308 | ||
| mod ID: M6ASITE094075 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534400-154534401:- | [6] | |
| Sequence | CTCCTCCCTGTTCCGTGAGGACCAGATCTACCGCATCGACC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000393564.6; ENST00000439227.5; ENST00000433845.1; ENST00000440967.5; ENST00000369620.6; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878309 | ||
| mod ID: M6ASITE094076 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534424-154534425:- | [7] | |
| Sequence | CTCTGACCGGCTGTCCAACCACATCTCCTCCCTGTTCCGTG | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000369620.6; ENST00000621232.5; ENST00000433845.1; ENST00000440967.5; ENST00000439227.5; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878310 | ||
| mod ID: M6ASITE094077 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534454-154534455:- | [6] | |
| Sequence | GGAGAAGCCCTTCGGGAGGGACCTGCAGAGCTCTGACCGGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000433845.1; ENST00000439227.5; ENST00000621232.5; ENST00000393564.6; ENST00000440967.5; ENST00000369620.6 | ||
| External Link | RMBase: m6A_site_878311 | ||
| mod ID: M6ASITE094078 | Click to Show/Hide the Full List | ||
| mod site | chrX:154534487-154534488:- | [6] | |
| Sequence | GGCTCCCAGCAGAGGCTGGAACCGCATCATCGTGGAGAAGC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000439227.5; ENST00000369620.6; ENST00000393562.8; ENST00000393564.6; ENST00000433845.1; ENST00000440967.5 | ||
| External Link | RMBase: m6A_site_878312 | ||
| mod ID: M6ASITE094079 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535194-154535195:- | [6] | |
| Sequence | CTACGAGGCCGTCACCAAGAACATTCACGAGTCCTGCATGA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; hESC-HEK293T; peripheral-blood | ||
| Seq Type List | m6A-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000393562.8; ENST00000439227.5; ENST00000497281.5; ENST00000369620.6; ENST00000393564.6; ENST00000440967.5; ENST00000433845.1 | ||
| External Link | RMBase: m6A_site_878313 | ||
| mod ID: M6ASITE094080 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535353-154535354:- | [6] | |
| Sequence | GGAGAAGCTCAAGCTGGAGGACTTCTTTGCCCGCAACTCCT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; peripheral-blood | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000440967.5; ENST00000393564.6; ENST00000369620.6; ENST00000439227.5; ENST00000621232.5; ENST00000497281.5; ENST00000433845.1; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878314 | ||
| mod ID: M6ASITE094081 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535760-154535761:- | [6] | |
| Sequence | TACCAGCCCCCGTGACCAGGACCCACAGGTCCCCTCCTGCT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000497281.5; ENST00000393562.8; ENST00000440967.5; ENST00000621232.5; ENST00000393564.6; ENST00000439227.5; ENST00000369620.6; ENST00000488434.1; ENST00000433845.1 | ||
| External Link | RMBase: m6A_site_878315 | ||
| mod ID: M6ASITE094082 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535788-154535789:- | [6] | |
| Sequence | TGCTCTCGTACTTCCTTGAGACCCCCATTACCAGCCCCCGT | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000433845.1; ENST00000393562.8; ENST00000497281.5; ENST00000440967.5; ENST00000439227.5; ENST00000369620.6; ENST00000393564.6; ENST00000488434.1 | ||
| External Link | RMBase: m6A_site_878316 | ||
| mod ID: M6ASITE094083 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535862-154535863:- | [6] | |
| Sequence | CAGCATGGCCAGCTTCGGGGACCTCCCCCCATCCCATCCCG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000433845.1; ENST00000440967.5; ENST00000439227.5; ENST00000393562.8; ENST00000497281.5; ENST00000393564.6; ENST00000621232.5; ENST00000488434.1 | ||
| External Link | RMBase: m6A_site_878317 | ||
| mod ID: M6ASITE094084 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535957-154535958:- | [6] | |
| Sequence | ACAGTGGCTGACATCCGCAAACAGAGTGAGCCCTTCTTCAA | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; A549 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000488434.1; ENST00000439227.5; ENST00000433845.1; ENST00000393562.8; ENST00000369620.6; ENST00000393564.6; ENST00000497281.5; ENST00000440967.5; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878318 | ||
| mod ID: M6ASITE094085 | Click to Show/Hide the Full List | ||
| mod site | chrX:154535977-154535978:- | [10] | |
| Sequence | GCTATGCCCGTTCCCGCCTCACAGTGGCTGACATCCGCAAA | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | HEK293 | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000497281.5; ENST00000488434.1; ENST00000621232.5; ENST00000393564.6; ENST00000439227.5; ENST00000393562.8; ENST00000369620.6; ENST00000433845.1; ENST00000440967.5 | ||
| External Link | RMBase: m6A_site_878319 | ||
| mod ID: M6ASITE094086 | Click to Show/Hide the Full List | ||
| mod site | chrX:154536012-154536013:- | [6] | |
| Sequence | GGATGGCCTTCTGCCCGAAAACACCTTCATCGTGGGCTATG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HeLa; A549; hESC-HEK293T; peripheral-blood | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq | ||
| Transcript ID List | ENST00000488434.1; ENST00000393564.6; ENST00000440967.5; ENST00000439227.5; ENST00000393562.8; ENST00000433845.1; ENST00000369620.6; ENST00000621232.5; ENST00000497281.5 | ||
| External Link | RMBase: m6A_site_878320 | ||
| mod ID: M6ASITE094087 | Click to Show/Hide the Full List | ||
| mod site | chrX:154545857-154545858:- | [6] | |
| Sequence | TGTGCATATGCACTTGCAAGACTTTTTTTTTTTTTTTTTTT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; A549 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000439227.5; ENST00000647501.1; ENST00000488434.1; ENST00000393562.8; ENST00000369620.6; ENST00000621232.5; ENST00000440967.5; ENST00000497281.5; ENST00000433845.1; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878325 | ||
| mod ID: M6ASITE094088 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546060-154546061:- | [7] | |
| Sequence | CTTCCATCAGTCGGATACACACATATTCATCATCATGGGTG | ||
| Motif Score | 2.084928571 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000497281.5; ENST00000488434.1; ENST00000439227.5; ENST00000621232.5; ENST00000433845.1; ENST00000647501.1; ENST00000369620.6; ENST00000440967.5; ENST00000393564.6; ENST00000393562.8 | ||
| External Link | RMBase: m6A_site_878326 | ||
| mod ID: M6ASITE094089 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546064-154546065:- | [7] | |
| Sequence | ATGCCTTCCATCAGTCGGATACACACATATTCATCATCATG | ||
| Motif Score | 2.110482143 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000488434.1; ENST00000433845.1; ENST00000647501.1; ENST00000497281.5; ENST00000393562.8; ENST00000440967.5; ENST00000393564.6; ENST00000369620.6; ENST00000439227.5; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878327 | ||
| mod ID: M6ASITE094090 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546127-154546128:- | [6] | |
| Sequence | AGCAGGTGGCCCTGAGCCGGACCCAGGTGTGCGGGATCCTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000393562.8; ENST00000439227.5; ENST00000621232.5; ENST00000393564.6; ENST00000647501.1; ENST00000433845.1; ENST00000369620.6; ENST00000440967.5 | ||
| External Link | RMBase: m6A_site_878328 | ||
| mod ID: M6ASITE094091 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546833-154546834:- | [7] | |
| Sequence | CAGCCCCCGGAAACGGTCGTACACTTCGGGGCTGCGAGCGC | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000439227.5; ENST00000621232.5; ENST00000440967.5; ENST00000369620.6; ENST00000393562.8; ENST00000393564.6; ENST00000647501.1 | ||
| External Link | RMBase: m6A_site_878329 | ||
| mod ID: M6ASITE094092 | Click to Show/Hide the Full List | ||
| mod site | chrX:154547161-154547162:- | [6] | |
| Sequence | GGGGCAGGCGGGGAAACCGGACAGTAGGGGCGGGGCCGGGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; Jurkat; GSC-11; HEK293T; HEK293A-TOA | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000440967.5; ENST00000369620.6; ENST00000393564.6; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878330 | ||
| mod ID: M6ASITE094093 | Click to Show/Hide the Full List | ||
| mod site | chrX:154547166-154547167:- | [6] | |
| Sequence | CCGCCGGGGCAGGCGGGGAAACCGGACAGTAGGGGCGGGGC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; Jurkat; GSC-11; HEK293T; HEK293A-TOA | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000440967.5; ENST00000393564.6; ENST00000621232.5 | ||
| External Link | RMBase: m6A_site_878331 | ||
| mod ID: M6ASITE094094 | Click to Show/Hide the Full List | ||
| mod site | chrX:154547249-154547250:- | [6] | |
| Sequence | CCCCGCCCAGGAGCCGAGGGACAGCCCAGAGGAGGCGTGGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; GSC-11; HEK293T; HEK293A-TOA | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000621232.5; ENST00000440967.5; ENST00000369620.6; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878332 | ||
| mod ID: M6ASITE094095 | Click to Show/Hide the Full List | ||
| mod site | chrX:154547566-154547567:- | [6] | |
| Sequence | CACAAGCCCCGCCCCCGAGAACTCGGGAAGCCGGCGAGAAG | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000369620.6; ENST00000393564.6 | ||
| External Link | RMBase: m6A_site_878335 | ||
Pseudouridine (Pseudo)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: PSESITE000286 | Click to Show/Hide the Full List | ||
| mod site | chrX:154546078-154546079:- | [11] | |
| Sequence | GCTTTTCCAGGGCGATGCCTTCCATCAGTCGGATACACACA | ||
| Transcript ID List | ENST00000647501.1; ENST00000488434.1; ENST00000369620.6; ENST00000393564.6; ENST00000393562.8; ENST00000440967.5; ENST00000433845.1; ENST00000497281.5; ENST00000439227.5; ENST00000621232.5 | ||
| External Link | RMBase: Pseudo_site_5019 | ||
References