General Information of the m6A Target Gene (ID: M6ATAR00695)
Target Name PHD finger protein 10 (PHF10)
Synonyms
BRG1-associated factor 45a; BAF45a; XAP135
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Gene Name PHF10
Chromosomal Location 6q27
Family SAYP family
Function
Involved in transcription activity regulation by chromatin remodeling. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and is required for the proliferation of neural progenitors. During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity).
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Gene ID 55274
Uniprot ID
PHF10_HUMAN
HGNC ID
HGNC:18250
KEGG ID
hsa:55274
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
PHF10 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Zinc finger CCCH domain-containing protein 13 (ZC3H13) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by ZC3H13
Cell Line mouse embryonic stem cells Mus musculus
Treatment: ZC3H13-/- ESCs
Control: Wild type ESCs
GSE145309
Regulation
logFC: -1.07E+00
p-value: 1.29E-67
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary DNA damage repair is a major barrier for chemotherapy efficacy of pancreatic cancer, it's the first time that PHD finger protein 10 (PHF10) was found and involved in the DNA damage response. ZC3H13 knockdown downregulated the m6A methylation of PHF10 and decreased PHF10 translation in a YTHDF1-dependent manner.
Target Regulation Down regulation
Responsed Disease Pancreatic cancer ICD-11: 2C10
Pathway Response Homologous recombination hsa03440
Cell Process Homologous recombination
DNA double strand breaks
In-vitro Model PANC-1 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0480
MIA PaCa-2 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0428
hTERT-HPNE Normal Homo sapiens CVCL_C466
DR-GFP-U2OS (DR-GFP-U2OS cells used for HR assay were generously provided by Huang Lab (Zhejiang University))
BxPC-3 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0186
Pancreatic cancer [ICD-11: 2C10]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary DNA damage repair is a major barrier for chemotherapy efficacy of pancreatic cancer, it's the first time that PHD finger protein 10 (PHF10) was found and involved in the DNA damage response. ZC3H13 knockdown downregulated the m6A methylation of PHF10 and decreased PHF10 translation in a YTHDF1-dependent manner.
Responsed Disease Pancreatic cancer [ICD-11: 2C10]
Target Regulator Zinc finger CCCH domain-containing protein 13 (ZC3H13) WRITER
Target Regulation Down regulation
Pathway Response Homologous recombination hsa03440
Cell Process Homologous recombination
DNA double strand breaks
In-vitro Model PANC-1 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0480
MIA PaCa-2 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0428
hTERT-HPNE Normal Homo sapiens CVCL_C466
DR-GFP-U2OS (DR-GFP-U2OS cells used for HR assay were generously provided by Huang Lab (Zhejiang University))
BxPC-3 Pancreatic ductal adenocarcinoma Homo sapiens CVCL_0186
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00695)
PHD finger protein 10 (PHF10)
N6-methyladenosine (m6A)
In total 74 m6A sequence/site(s) in this target gene
mod ID: M6ASITE078213 Click to Show/Hide the Full List
mod site chr6:169703944-169703945:- [2]
Sequence TGGAATATTTGGTGCCATTTACAACATTATTTTCATGCCAA
Motif Score 2.07285119
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000366780.8
External Link RMBase: m6A_site_743493
mod ID: M6ASITE078214 Click to Show/Hide the Full List
mod site chr6:169704018-169704019:- [3]
Sequence AGTGGGCAGAAGGGGGAAAAACAGCAAAGAGGGATAAAATA
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293
Seq Type List m6A-seq; m6A-REF-seq
Transcript ID List ENST00000621772.4; ENST00000339209.9; ENST00000366780.8
External Link RMBase: m6A_site_743496
mod ID: M6ASITE078215 Click to Show/Hide the Full List
mod site chr6:169704049-169704050:- [4]
Sequence GTTGTCAGCGGGCCCCCCCAACACCCAGGAAAGTGGGCAGA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000621772.4; ENST00000339209.9; ENST00000366780.8
External Link RMBase: m6A_site_743497
mod ID: M6ASITE078216 Click to Show/Hide the Full List
mod site chr6:169704072-169704073:- [2]
Sequence CCTAGGTCGCTGGATTTGTGACTGTTGTCAGCGGGCCCCCC
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000339209.9; ENST00000366780.8; ENST00000621772.4
External Link RMBase: m6A_site_743499
mod ID: M6ASITE078217 Click to Show/Hide the Full List
mod site chr6:169705179-169705180:- [2]
Sequence GATGTTCTGTGATATGTGTGACAGAGGTTATCATACTTTTT
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743522
mod ID: M6ASITE078218 Click to Show/Hide the Full List
mod site chr6:169705223-169705224:- [3]
Sequence AAAACATGCATTATATGTGGACAACCCCACCATGAAGAAGA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T
Seq Type List m6A-seq; DART-seq; MAZTER-seq
Transcript ID List ENST00000366780.8; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743523
mod ID: M6ASITE078219 Click to Show/Hide the Full List
mod site chr6:169705240-169705241:- [3]
Sequence GGCAGTGTATGGAATGTAAAACATGCATTATATGTGGACAA
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000621772.4; ENST00000366780.8; ENST00000339209.9
External Link RMBase: m6A_site_743524
mod ID: M6ASITE078220 Click to Show/Hide the Full List
mod site chr6:169705270-169705271:- [3]
Sequence AGCTTGTTTCTATGATTAAGACCTACCCATGGCAGTGTATG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000621772.4; ENST00000366780.8; ENST00000339209.9
External Link RMBase: m6A_site_743525
mod ID: M6ASITE078221 Click to Show/Hide the Full List
mod site chr6:169705297-169705298:- [2]
Sequence ATCCTTCTTGCCTGGATATGACAATGGAGCTTGTTTCTATG
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000621772.4; ENST00000339209.9; ENST00000366780.8
External Link RMBase: m6A_site_743527
mod ID: M6ASITE078222 Click to Show/Hide the Full List
mod site chr6:169705640-169705641:- [4]
Sequence GGAAAGGCTGAATCACTTATACACTGCTCCCAATGTGAGAA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000366780.8
External Link RMBase: m6A_site_743531
mod ID: M6ASITE078223 Click to Show/Hide the Full List
mod site chr6:169705668-169705669:- [5]
Sequence TCTGAAGGGTAAGGAGTCCAACAAGAAAGGAAAGGCTGAAT
Motif Score 2.173910714
Cell/Tissue List brain; kidney; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000366780.8
External Link RMBase: m6A_site_743532
mod ID: M6ASITE078224 Click to Show/Hide the Full List
mod site chr6:169707064-169707065:- [2]
Sequence TCTATTTATGTATAAGGTTGACTTTTTTTAAATAAATAAGC
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000612128.1; ENST00000339209.9; ENST00000480008.1; ENST00000621772.4
External Link RMBase: m6A_site_743537
mod ID: M6ASITE078225 Click to Show/Hide the Full List
mod site chr6:169707117-169707118:- [2]
Sequence ATATTTATTATTTTGTAGAGACATTTGTGATTGTTTAGAGT
Motif Score 2.897386905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000339209.9; ENST00000612128.1; ENST00000621772.4; ENST00000366780.8; ENST00000480008.1
External Link RMBase: m6A_site_743538
mod ID: M6ASITE078226 Click to Show/Hide the Full List
mod site chr6:169707146-169707147:- [2]
Sequence AAGTTTTATATGTATGTTTAACTTCCATGATATTTATTATT
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000621772.4; ENST00000480008.1; ENST00000339209.9; ENST00000366780.8; ENST00000612128.1
External Link RMBase: m6A_site_743539
mod ID: M6ASITE078227 Click to Show/Hide the Full List
mod site chr6:169707232-169707233:- [2]
Sequence TTAAATGGTTTGAGCATGTGACACTATCCTTTTGTTGGGGG
Motif Score 2.859755952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000621772.4; ENST00000480008.1; ENST00000339209.9; ENST00000612128.1
External Link RMBase: m6A_site_743540
mod ID: M6ASITE078228 Click to Show/Hide the Full List
mod site chr6:169707254-169707255:- [3]
Sequence GAGGGTAACTACACTGCAAGACTTAAATGGTTTGAGCATGT
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; MT4
Seq Type List m6A-seq; DART-seq; MeRIP-seq
Transcript ID List ENST00000480008.1; ENST00000621772.4; ENST00000612128.1; ENST00000339209.9; ENST00000366780.8
External Link RMBase: m6A_site_743541
mod ID: M6ASITE078229 Click to Show/Hide the Full List
mod site chr6:169707305-169707306:- [3]
Sequence TATAGGAACACACAATGAGAACCTTATGTTTAGAATGTAGC
Motif Score 2.930744048
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000366780.8; ENST00000612128.1; ENST00000339209.9; ENST00000621772.4; ENST00000480008.1
External Link RMBase: m6A_site_743542
mod ID: M6ASITE078230 Click to Show/Hide the Full List
mod site chr6:169707318-169707319:- [3]
Sequence TTTTTTATTTAGGTATAGGAACACACAATGAGAACCTTATG
Motif Score 2.951386905
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000339209.9; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743543
mod ID: M6ASITE078231 Click to Show/Hide the Full List
mod site chr6:169707350-169707351:- [2]
Sequence AATTTGGATTATAGAAGTGCACTTCCTAGCTGTTTTTTATT
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000339209.9; ENST00000612128.1; ENST00000480008.1; ENST00000621772.4
External Link RMBase: m6A_site_743544
mod ID: M6ASITE078232 Click to Show/Hide the Full List
mod site chr6:169707375-169707376:- [3]
Sequence ACAGATATGATCATAACTGAACCAGAATTTGGATTATAGAA
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000366780.8; ENST00000612128.1; ENST00000480008.1
External Link RMBase: m6A_site_743545
mod ID: M6ASITE078233 Click to Show/Hide the Full List
mod site chr6:169707380-169707381:- [2]
Sequence CAGGTACAGATATGATCATAACTGAACCAGAATTTGGATTA
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000621772.4; ENST00000366780.8; ENST00000612128.1; ENST00000339209.9; ENST00000480008.1
External Link RMBase: m6A_site_743546
mod ID: M6ASITE078234 Click to Show/Hide the Full List
mod site chr6:169707479-169707480:- [2]
Sequence ATTAAATAAGTATATCTTTTACATTTAGTACAGGTACCATA
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000612128.1
External Link RMBase: m6A_site_743547
mod ID: M6ASITE078235 Click to Show/Hide the Full List
mod site chr6:169707514-169707515:- [2]
Sequence ATTTACTATGCCAGTATCTAACTTAAACTATTAGTATTAAA
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000339209.9; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743548
mod ID: M6ASITE078236 Click to Show/Hide the Full List
mod site chr6:169707557-169707558:- [2]
Sequence ATTGTTTGGTTACTTCCCTGACTTTAGTGAAAGATATTAGA
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000621772.4; ENST00000612128.1; ENST00000480008.1; ENST00000366780.8; ENST00000339209.9
External Link RMBase: m6A_site_743549
mod ID: M6ASITE078237 Click to Show/Hide the Full List
mod site chr6:169707566-169707567:- [2]
Sequence GAATTTAATATTGTTTGGTTACTTCCCTGACTTTAGTGAAA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000621772.4; ENST00000339209.9; ENST00000366780.8; ENST00000480008.1; ENST00000612128.1
External Link RMBase: m6A_site_743550
mod ID: M6ASITE078238 Click to Show/Hide the Full List
mod site chr6:169707656-169707657:- [2]
Sequence ATTGCTCTAGAATGTGAATGACTACCCTTGTGTTTTACTCC
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000339209.9; ENST00000480008.1; ENST00000621772.4; ENST00000366780.8; ENST00000612128.1
External Link RMBase: m6A_site_743551
mod ID: M6ASITE078239 Click to Show/Hide the Full List
mod site chr6:169707745-169707746:- [2]
Sequence TGATTTAAACTTAGAAATAAACCTAGAATTTTTTGGTGTCC
Motif Score 2.185083333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000612128.1; ENST00000480008.1; ENST00000621772.4; ENST00000366780.8; ENST00000339209.9
External Link RMBase: m6A_site_743552
mod ID: M6ASITE078240 Click to Show/Hide the Full List
mod site chr6:169707757-169707758:- [2]
Sequence AACAAATCATTATGATTTAAACTTAGAAATAAACCTAGAAT
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000612128.1; ENST00000339209.9; ENST00000621772.4; ENST00000366780.8; ENST00000480008.1
External Link RMBase: m6A_site_743553
mod ID: M6ASITE078241 Click to Show/Hide the Full List
mod site chr6:169707789-169707790:- [2]
Sequence AAGGCTGTTGGGTAAGAAAAACTAAGTGATTTAACAAATCA
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000366780.8; ENST00000612128.1
External Link RMBase: m6A_site_743554
mod ID: M6ASITE078242 Click to Show/Hide the Full List
mod site chr6:169708186-169708187:- [2]
Sequence TCAAGTAGAAAAGTAAGTGTACTGTGAGCCTTTTATTTGAG
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000612128.1; ENST00000366780.8; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743555
mod ID: M6ASITE078243 Click to Show/Hide the Full List
mod site chr6:169708317-169708318:- [2]
Sequence AGAACAGTATTGTTTAGGTTACATTAACCTGAAATTTAAAG
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000621772.4; ENST00000366780.8; ENST00000612128.1; ENST00000480008.1; ENST00000339209.9
External Link RMBase: m6A_site_743556
mod ID: M6ASITE078244 Click to Show/Hide the Full List
mod site chr6:169708471-169708472:- [3]
Sequence TTTATAAAAAGTATTAATAAACCAAGATGTGCCTAAATATT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000366780.8; ENST00000612128.1; ENST00000480008.1
External Link RMBase: m6A_site_743557
mod ID: M6ASITE078245 Click to Show/Hide the Full List
mod site chr6:169708515-169708516:- [3]
Sequence GTCATCATACATTAATGTGAACATGCTTATTAAAAGTTAAC
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000366780.8; ENST00000339209.9; ENST00000480008.1; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743558
mod ID: M6ASITE078246 Click to Show/Hide the Full List
mod site chr6:169708549-169708550:- [3]
Sequence CAGGTATTTCAAAGATGGGAACAACCAGTATCTAGTCATCA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000612128.1; ENST00000366780.8
External Link RMBase: m6A_site_743559
mod ID: M6ASITE078247 Click to Show/Hide the Full List
mod site chr6:169708594-169708595:- [3]
Sequence ATATTTTACATAATCTGTGAACATTTTTAGTACCTAAAAAT
Motif Score 2.951386905
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000480008.1; ENST00000366780.8; ENST00000612128.1
External Link RMBase: m6A_site_743560
mod ID: M6ASITE078248 Click to Show/Hide the Full List
mod site chr6:169708648-169708649:- [3]
Sequence AAATCATATGGATTAACTGAACTTAATAGTACTCAAGTAGG
Motif Score 3.373380952
Cell/Tissue List HeLa; AML
Seq Type List m6A-seq; miCLIP
Transcript ID List ENST00000366780.8; ENST00000612128.1; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743561
mod ID: M6ASITE078249 Click to Show/Hide the Full List
mod site chr6:169708925-169708926:- [2]
Sequence ATATAAATTAATGCTTAATAACTGAAAGCAAGTGAGCTCCA
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000612128.1; ENST00000621772.4; ENST00000339209.9
External Link RMBase: m6A_site_743562
mod ID: M6ASITE078250 Click to Show/Hide the Full List
mod site chr6:169709095-169709096:- [2]
Sequence GAAATGCTTTTATGTAATTAACTTAAAAATTCTTTTTTTTT
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000339209.9; ENST00000366780.8; ENST00000480008.1; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743563
mod ID: M6ASITE078251 Click to Show/Hide the Full List
mod site chr6:169709193-169709194:- [3]
Sequence TTTCCCTCAAACTAACTAGAACACGTTCTAACATGTTCATT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000612128.1; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000366780.8
External Link RMBase: m6A_site_743564
mod ID: M6ASITE078252 Click to Show/Hide the Full List
mod site chr6:169709203-169709204:- [3]
Sequence GTAAGTCACCTTTCCCTCAAACTAACTAGAACACGTTCTAA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000621772.4; ENST00000612128.1; ENST00000366780.8; ENST00000339209.9; ENST00000480008.1
External Link RMBase: m6A_site_743565
mod ID: M6ASITE078253 Click to Show/Hide the Full List
mod site chr6:169709233-169709234:- [3]
Sequence GTGGTAAATAATTCACAAGAACAGGCTGAAGTAAGTCACCT
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000612128.1; ENST00000480008.1; ENST00000621772.4; ENST00000339209.9; ENST00000366780.8
External Link RMBase: m6A_site_743566
mod ID: M6ASITE078254 Click to Show/Hide the Full List
mod site chr6:169709262-169709263:- [3]
Sequence TAAACACCTTGTATGTCAGAACTGTGATTGTGGTAAATAAT
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000480008.1; ENST00000612128.1; ENST00000621772.4; ENST00000366780.8
External Link RMBase: m6A_site_743567
mod ID: M6ASITE078255 Click to Show/Hide the Full List
mod site chr6:169709279-169709280:- [3]
Sequence TTGCCAAGTGAAATTGTTAAACACCTTGTATGTCAGAACTG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000366780.8; ENST00000621772.4; ENST00000612128.1; ENST00000480008.1
External Link RMBase: m6A_site_743568
mod ID: M6ASITE078256 Click to Show/Hide the Full List
mod site chr6:169709438-169709439:- [2]
Sequence TAAAAGGAAGAATTAGCTGTACAGTTTCATATTTGGGATGG
Motif Score 2.856142857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000621772.4; ENST00000612128.1; ENST00000366780.8; ENST00000339209.9; ENST00000480008.1
External Link RMBase: m6A_site_743569
mod ID: M6ASITE078257 Click to Show/Hide the Full List
mod site chr6:169709556-169709557:- [2]
Sequence CAACTATTATTATATTTTGAACTTTTCCTCCCTCTGTCTGC
Motif Score 3.373380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000366780.8; ENST00000612128.1
External Link RMBase: m6A_site_743570
mod ID: M6ASITE078258 Click to Show/Hide the Full List
mod site chr6:169709633-169709634:- [3]
Sequence ATTCTATGGCAAGAATTAAAACATACTTGTTAACTTGTTGA
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000480008.1; ENST00000366780.8; ENST00000621772.4; ENST00000339209.9; ENST00000612128.1
External Link RMBase: m6A_site_743571
mod ID: M6ASITE078259 Click to Show/Hide the Full List
mod site chr6:169709709-169709710:- [3]
Sequence CTGGGATAGAAAATAATAAAACCTGTTACTTACATTGTAGT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000366780.8; ENST00000480008.1; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743572
mod ID: M6ASITE078260 Click to Show/Hide the Full List
mod site chr6:169709820-169709821:- [3]
Sequence ATGAGTGGATATACTGTTAGACTAAGTTGCATTTTTTTTAG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000621772.4; ENST00000480008.1; ENST00000366780.8; ENST00000612128.1; ENST00000339209.9
External Link RMBase: m6A_site_743573
mod ID: M6ASITE078261 Click to Show/Hide the Full List
mod site chr6:169709955-169709956:- [3]
Sequence GGCAAGTATGGGTTTTTAAAACATTATTTCATAGGCAGAAG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000480008.1; ENST00000366780.8; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743574
mod ID: M6ASITE078262 Click to Show/Hide the Full List
mod site chr6:169710015-169710016:- [2]
Sequence CTTCTGTTTTCTGTATATGTACAATTTATAAGTCTTTTTTT
Motif Score 2.856142857
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000612128.1; ENST00000621772.4; ENST00000480008.1; ENST00000366780.8; ENST00000339209.9
External Link RMBase: m6A_site_743575
mod ID: M6ASITE078263 Click to Show/Hide the Full List
mod site chr6:169710214-169710215:- [6]
Sequence GTAGAAGAAAAAAGCCCCTGACTCAGCTTCTTTACTGACCA
Motif Score 3.28175
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000480008.1; ENST00000366780.8; ENST00000621772.4; ENST00000612128.1; ENST00000339209.9
External Link RMBase: m6A_site_743576
mod ID: M6ASITE078264 Click to Show/Hide the Full List
mod site chr6:169710239-169710240:- [4]
Sequence GTCCAAGTCAGTTCCTGGGTACAAGGTAGAAGAAAAAAGCC
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000621772.4; ENST00000339209.9; ENST00000480008.1; ENST00000612128.1; ENST00000366780.8
External Link RMBase: m6A_site_743577
mod ID: M6ASITE078265 Click to Show/Hide the Full List
mod site chr6:169710305-169710306:- [3]
Sequence GGGAAGACAGAAATCAAAAGACAAAGCTGCCACTCCAAGAA
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; H1A; H1B; hNPCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000339209.9; ENST00000612128.1; ENST00000480008.1; ENST00000366780.8; ENST00000621772.4
External Link RMBase: m6A_site_743578
mod ID: M6ASITE078266 Click to Show/Hide the Full List
mod site chr6:169710319-169710320:- [3]
Sequence GAGGACTCTTTCCAGGGAAGACAGAAATCAAAAGACAAAGC
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; hNPCs; fibroblasts; A549; LCLs; MM6; Huh7; Jurkat; CD4T; GSC-11; HEK293A-TOA; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000366780.8; ENST00000612128.1; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743579
mod ID: M6ASITE078267 Click to Show/Hide the Full List
mod site chr6:169710335-169710336:- [3]
Sequence CCCTCCTGACAGCCAGGAGGACTCTTTCCAGGGAAGACAGA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; hNPCs; fibroblasts; A549; LCLs; MM6; Huh7; Jurkat; CD4T; GSC-11; HEK293A-TOA; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000612128.1; ENST00000621772.4; ENST00000366780.8; ENST00000480008.1; ENST00000339209.9
External Link RMBase: m6A_site_743580
mod ID: M6ASITE078268 Click to Show/Hide the Full List
mod site chr6:169712455-169712456:- [5]
Sequence TCCTGAGCTCCCTGCTCTAGACAGTGATGGTGATTCAGATG
Motif Score 2.897386905
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000366780.8; ENST00000339209.9; ENST00000621772.4; ENST00000612128.1; ENST00000480008.1
External Link RMBase: m6A_site_743581
mod ID: M6ASITE078269 Click to Show/Hide the Full List
mod site chr6:169712503-169712504:- [4]
Sequence GCTGCGGTATCTGCCATTAAACACAGCCCTGTATGAGCCCC
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000366780.8; ENST00000339209.9; ENST00000480008.1; ENST00000612128.1; ENST00000621772.4
External Link RMBase: m6A_site_743582
mod ID: M6ASITE078270 Click to Show/Hide the Full List
mod site chr6:169714793-169714794:- [3]
Sequence AAGTTTTGCCAACAGAGCGAACAAAGGTCAGTTCTTACCCA
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000612128.1; ENST00000366780.8; ENST00000621772.4; ENST00000339209.9; ENST00000480008.1
External Link RMBase: m6A_site_743583
mod ID: M6ASITE078271 Click to Show/Hide the Full List
mod site chr6:169715712-169715713:- [3]
Sequence GAGCTTATTTTGACTTGCAGACACATGTAGGATAACTTAAA
Motif Score 2.897386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000612128.1
External Link RMBase: m6A_site_743584
mod ID: M6ASITE078272 Click to Show/Hide the Full List
mod site chr6:169715749-169715750:- [2]
Sequence AATAGCAACTTAAACCGGGAACGCATGGAAGAAAGAAGAGC
Motif Score 2.925321429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000480008.1; ENST00000621772.4; ENST00000612128.1; ENST00000366780.8; ENST00000339209.9
External Link RMBase: m6A_site_743585
mod ID: M6ASITE078273 Click to Show/Hide the Full List
mod site chr6:169715756-169715757:- [3]
Sequence AGAATTTAATAGCAACTTAAACCGGGAACGCATGGAAGAAA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000339209.9; ENST00000621772.4; ENST00000612128.1; ENST00000366780.8; ENST00000480008.1
External Link RMBase: m6A_site_743586
mod ID: M6ASITE078274 Click to Show/Hide the Full List
mod site chr6:169715762-169715763:- [2]
Sequence AGCAGCAGAATTTAATAGCAACTTAAACCGGGAACGCATGG
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4; ENST00000612128.1
External Link RMBase: m6A_site_743587
mod ID: M6ASITE078275 Click to Show/Hide the Full List
mod site chr6:169715973-169715974:- [3]
Sequence AGAACGTCAACGAATTACAGACCATTATAAAGAGTATTCCG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34
Seq Type List m6A-seq
Transcript ID List ENST00000366780.8; ENST00000621772.4; ENST00000612128.1; ENST00000480008.1; ENST00000339209.9
External Link RMBase: m6A_site_743588
mod ID: M6ASITE078276 Click to Show/Hide the Full List
mod site chr6:169715977-169715978:- [5]
Sequence AAAAAGAACGTCAACGAATTACAGACCATTATAAAGAGTAT
Motif Score 2.07285119
Cell/Tissue List kidney
Seq Type List m6A-REF-seq
Transcript ID List ENST00000339209.9; ENST00000612128.1; ENST00000366780.8; ENST00000621772.4; ENST00000480008.1
External Link RMBase: m6A_site_743589
mod ID: M6ASITE078277 Click to Show/Hide the Full List
mod site chr6:169716026-169716027:- [3]
Sequence ATAAAAGAATATCCAGCCAAACATGCTGAGTATTCTGTTAT
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000480008.1; ENST00000366780.8; ENST00000612128.1; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743590
mod ID: M6ASITE078278 Click to Show/Hide the Full List
mod site chr6:169717837-169717838:- [3]
Sequence AGCTAAATGTCATTACTGAAACTCAGTGCACTCTAGGTAAG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000366780.8; ENST00000612128.1; ENST00000464779.1; ENST00000480008.1; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743591
mod ID: M6ASITE078279 Click to Show/Hide the Full List
mod site chr6:169717871-169717872:- [3]
Sequence GATTTGTCTCACAAGGAGAAACTCTACCTGAGAGAGCTAAA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000621772.4; ENST00000612128.1; ENST00000339209.9; ENST00000366780.8; ENST00000480008.1; ENST00000464779.1
External Link RMBase: m6A_site_743592
mod ID: M6ASITE078280 Click to Show/Hide the Full List
mod site chr6:169717881-169717882:- [4]
Sequence AGAGCGACGAGATTTGTCTCACAAGGAGAAACTCTACCTGA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000480008.1; ENST00000464779.1; ENST00000366780.8; ENST00000612128.1; ENST00000621772.4; ENST00000339209.9
External Link RMBase: m6A_site_743593
mod ID: M6ASITE078281 Click to Show/Hide the Full List
mod site chr6:169718836-169718837:- [3]
Sequence GAATACTATATGCTTCAAGAACAAGTCAGTGAATATTTGGG
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000366780.8; ENST00000480008.1; ENST00000464779.1; ENST00000612128.1; ENST00000339209.9; ENST00000621772.4
External Link RMBase: m6A_site_743594
mod ID: M6ASITE078282 Click to Show/Hide the Full List
mod site chr6:169718862-169718863:- [3]
Sequence ACAAATGGCCACCTGATGAAACAGGAGAATACTATATGCTT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000480008.1; ENST00000612128.1; ENST00000366780.8; ENST00000339209.9; ENST00000621772.4; ENST00000464779.1
External Link RMBase: m6A_site_743595
mod ID: M6ASITE078283 Click to Show/Hide the Full List
mod site chr6:169718882-169718883:- [4]
Sequence AGCAGAAAACTTGATAGAGTACAAATGGCCACCTGATGAAA
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000621772.4; ENST00000480008.1; ENST00000464779.1; ENST00000339209.9; ENST00000366780.8; ENST00000612128.1
External Link RMBase: m6A_site_743596
mod ID: M6ASITE078284 Click to Show/Hide the Full List
mod site chr6:169721023-169721024:- [3]
Sequence ATAGTTCTAGGAGTTGTGAAACTTCAAGTCAAGATCTTGGG
Motif Score 2.627720238
Cell/Tissue List HeLa; U2OS
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000621772.4; ENST00000366780.8; ENST00000480008.1; ENST00000612128.1; ENST00000339209.9
External Link RMBase: m6A_site_743597
mod ID: M6ASITE078285 Click to Show/Hide the Full List
mod site chr6:169721080-169721081:- [3]
Sequence AAGATAATTCAAATGATGGGACCCAGCCATCCAAAAGGAGG
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; U2OS
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000366780.8; ENST00000621772.4; ENST00000480008.1; ENST00000339209.9; ENST00000612128.1
External Link RMBase: m6A_site_743598
mod ID: M6ASITE078286 Click to Show/Hide the Full List
mod site chr6:169723978-169723979:- [7]
Sequence CAGCGGCGGCGGCGGCCGGGACAAGGCGGAGGCGACGGCGG
Motif Score 3.643047619
Cell/Tissue List CD34; hESC-HEK293T; U2OS
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000621772.4; ENST00000339209.9; ENST00000480008.1; ENST00000612128.1
External Link RMBase: m6A_site_743599