m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00656)
Target Name Translocating chain-associated membrane protein 2 (TRAM2)
Gene Name TRAM2
Chromosomal Location 6p12.2
Family TRAM family
Function
Necessary for collagen type I synthesis. May couple the activity of the ER Ca(2+) pump SERCA2B with the activity of the translocon. This coupling may increase the local Ca(2+) concentration at the site of collagen synthesis, and a high Ca(2+) concentration may be necessary for the function of molecular chaperones involved in collagen folding. Required for proper insertion of the first transmembrane helix N-terminus of TM4SF20 into the ER lumen, may act as a ceramide sensor for regulated alternative translocation (RAT).
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Gene ID 9697
Uniprot ID
TRAM2_HUMAN
HGNC ID
HGNC:16855
KEGG ID
hsa:9697
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
TRAM2 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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RNA-binding motif protein 15B (RBM15B) [WRITER]
 Regulator Info 
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary Overexpression of RBM15B promotes HCC cell proliferation and invasion and induces sorafenib resistance in HCC cells. RBM15B is transcriptionally activated by YY1 and regulates the stability of Translocating chain-associated membrane protein 2 (TRAM2) mRNA in an m6A-dependent manner.
Target Regulation Up regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
 Disease Info 
Responsed Drug Sorafenib Approved
 Drug Info 
In-vitro Model SK-HEP-1 Liver and intrahepatic bile duct epithelial neoplasm Homo sapiens CVCL_0525
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
L-02 Endocervical adenocarcinoma Homo sapiens CVCL_6926
Hep-G2.215 (Hep-G2.215 were purchased from the Shanghai Cell Bank of the Chinese Academy of Sciences)
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
7721 (Human hepatic malignant cell line)
In-vivo Model HCC-LM3 cells transfected with sh-NC and sh-RBM15B-3 were injected into the axilla or tail vein of mice.
Liver cancer [ICD-11: 2C12]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary Overexpression of RBM15B promotes HCC cell proliferation and invasion and induces sorafenib resistance in HCC cells. RBM15B is transcriptionally activated by YY1 and regulates the stability of Translocating chain-associated membrane protein 2 (TRAM2) mRNA in an m6A-dependent manner.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator RNA-binding motif protein 15B (RBM15B) WRITER
 Regulator Info 
Target Regulation Up regulation
Responsed Drug Sorafenib Approved
 Drug Info 
In-vitro Model SK-HEP-1 Liver and intrahepatic bile duct epithelial neoplasm Homo sapiens CVCL_0525
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
L-02 Endocervical adenocarcinoma Homo sapiens CVCL_6926
Hep-G2.215 (Hep-G2.215 were purchased from the Shanghai Cell Bank of the Chinese Academy of Sciences)
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
7721 (Human hepatic malignant cell line)
In-vivo Model HCC-LM3 cells transfected with sh-NC and sh-RBM15B-3 were injected into the axilla or tail vein of mice.
Sorafenib [Approved]
 Drug Info 
In total 1 item(s) under this drug
Experiment 1 Reporting the m6A-centered Drug Response [1]
Response Summary Overexpression of RBM15B promotes HCC cell proliferation and invasion and induces sorafenib resistance in HCC cells. RBM15B is transcriptionally activated by YY1 and regulates the stability of Translocating chain-associated membrane protein 2 (TRAM2) mRNA in an m6A-dependent manner.
Target Regulator RNA-binding motif protein 15B (RBM15B) WRITER
 Regulator Info 
Target Regulation Up regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
 Disease Info 
In-vitro Model SK-HEP-1 Liver and intrahepatic bile duct epithelial neoplasm Homo sapiens CVCL_0525
Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
L-02 Endocervical adenocarcinoma Homo sapiens CVCL_6926
Hep-G2.215 (Hep-G2.215 were purchased from the Shanghai Cell Bank of the Chinese Academy of Sciences)
Hep-G2 Hepatoblastoma Homo sapiens CVCL_0027
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
7721 (Human hepatic malignant cell line)
In-vivo Model HCC-LM3 cells transfected with sh-NC and sh-RBM15B-3 were injected into the axilla or tail vein of mice.
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00656)
Translocating chain-associated membrane protein 2 (TRAM2)
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE001516 Click to Show/Hide the Full List
mod site chr6:52556484-52556485:- [2]
Sequence GTTTGAGACCAGGCTGGCCAACATGGTGAAACCCCATCTCT
Transcript ID List rmsk_1949754; ENST00000182527.4
External Link RMBase: RNA-editing_site_116781
5-methylcytidine (m5C)
In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004032 Click to Show/Hide the Full List
mod site chr6:52577018-52577019:- [3]
Sequence GGCGAGCGGCTGTGGGAGAGCGGGCGGCGGGCCGGCGGGCG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m5C_site_38201
N6-methyladenosine (m6A)
In total 66 m6A sequence/site(s) in this target gene
mod ID: M6ASITE075456 Click to Show/Hide the Full List
mod site chr6:52497454-52497455:- [4]
Sequence TTTTAAATGTACATTTTGGAACAAATGATCAAATATTTTCT
Motif Score 2.951386905
Cell/Tissue List HEK293T; Huh7; MSC
Seq Type List MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720432
mod ID: M6ASITE075457 Click to Show/Hide the Full List
mod site chr6:52497498-52497499:- [5]
Sequence TGTTTCTGTCTGGTTTTAAAACAAATTACAGTTTTGTATGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; Huh7; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720433
mod ID: M6ASITE075458 Click to Show/Hide the Full List
mod site chr6:52497544-52497545:- [5]
Sequence TGTCTTTTTGCTTTTGGTGAACTTTTTTTCAAAATCATTTT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720434
mod ID: M6ASITE075459 Click to Show/Hide the Full List
mod site chr6:52497628-52497629:- [5]
Sequence GGACCAAATTTCAACAAGGAACTCAAGGAAAATTTGTACCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720435
mod ID: M6ASITE075460 Click to Show/Hide the Full List
mod site chr6:52497635-52497636:- [6]
Sequence TTCATATGGACCAAATTTCAACAAGGAACTCAAGGAAAATT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T; A549
Seq Type List MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720436
mod ID: M6ASITE075461 Click to Show/Hide the Full List
mod site chr6:52497646-52497647:- [5]
Sequence ACTCTAGCCTGTTCATATGGACCAAATTTCAACAAGGAACT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720437
mod ID: M6ASITE075462 Click to Show/Hide the Full List
mod site chr6:52497684-52497685:- [5]
Sequence AACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720438
mod ID: M6ASITE075463 Click to Show/Hide the Full List
mod site chr6:52497728-52497729:- [5]
Sequence AAAAAACATCTGAAGGATGAACTAAGGCTGCTGGTGCCCTG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; hNPCs; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720439
mod ID: M6ASITE075464 Click to Show/Hide the Full List
mod site chr6:52497743-52497744:- [5]
Sequence CGGTTCCTCTGTTTAAAAAAACATCTGAAGGATGAACTAAG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; U2OS; hESCs; fibroblasts; A549; GM12878; MM6; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720440
mod ID: M6ASITE075465 Click to Show/Hide the Full List
mod site chr6:52497774-52497775:- [5]
Sequence TTCATGTGATGAGACTGTAAACCTCATTTTTCGGTTCCTCT
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720441
mod ID: M6ASITE075466 Click to Show/Hide the Full List
mod site chr6:52497781-52497782:- [5]
Sequence TTGAGTGTTCATGTGATGAGACTGTAAACCTCATTTTTCGG
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; hESCs; fibroblasts; A549; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720442
mod ID: M6ASITE075467 Click to Show/Hide the Full List
mod site chr6:52498356-52498357:- [5]
Sequence ACATGTCTGACTGTTGCAGAACTGTTCGAGCTCCTAATTCA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720443
mod ID: M6ASITE075468 Click to Show/Hide the Full List
mod site chr6:52498376-52498377:- [6]
Sequence GTGCTAACACATAAACACATACATGTCTGACTGTTGCAGAA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720444
mod ID: M6ASITE075469 Click to Show/Hide the Full List
mod site chr6:52498382-52498383:- [5]
Sequence CTCCAAGTGCTAACACATAAACACATACATGTCTGACTGTT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720445
mod ID: M6ASITE075470 Click to Show/Hide the Full List
mod site chr6:52498536-52498537:- [5]
Sequence CCTCTGGCCCCACATAGCAAACTCCTTCTCCGTTATTTTCC
Motif Score 2.627720238
Cell/Tissue List HeLa; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720446
mod ID: M6ASITE075471 Click to Show/Hide the Full List
mod site chr6:52498561-52498562:- [5]
Sequence TTCCAGCCCCCACTTCGAAAACTCTCCTCTGGCCCCACATA
Motif Score 2.627720238
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720447
mod ID: M6ASITE075472 Click to Show/Hide the Full List
mod site chr6:52500038-52500039:- [7]
Sequence GAGGGAGGTGGCGCTGGTGGACCAAGGATCTGTGCTACCCG
Motif Score 3.622404762
Cell/Tissue List fibroblasts
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720448
mod ID: M6ASITE075473 Click to Show/Hide the Full List
mod site chr6:52500072-52500073:- [7]
Sequence ATTTGTGGGGAAGCCAACAGACACAGCAGGAGGAGAGGGAG
Motif Score 2.897386905
Cell/Tissue List fibroblasts
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720449
mod ID: M6ASITE075474 Click to Show/Hide the Full List
mod site chr6:52500199-52500200:- [6]
Sequence ATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTTGAGAGCT
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720450
mod ID: M6ASITE075475 Click to Show/Hide the Full List
mod site chr6:52500349-52500350:- [5]
Sequence TCTGTGGCAGGTTGACACAGACTGTGTTGCCAGAGCTGAAA
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720451
mod ID: M6ASITE075476 Click to Show/Hide the Full List
mod site chr6:52500872-52500873:- [5]
Sequence CTCAGGTGAGTCCAGGTTAAACTGTTGAGTTGTGGCTTCAA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720452
mod ID: M6ASITE075477 Click to Show/Hide the Full List
mod site chr6:52500955-52500956:- [5]
Sequence CCTTCCTCCCCCATTAGAGAACACCCATCCTAGGTGCTCTC
Motif Score 2.951386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720453
mod ID: M6ASITE075478 Click to Show/Hide the Full List
mod site chr6:52501530-52501531:- [5]
Sequence TCCCAATTAAGAACCTCCGAACTCTGTTTTGAGGCAAAGGG
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720454
mod ID: M6ASITE075479 Click to Show/Hide the Full List
mod site chr6:52501538-52501539:- [5]
Sequence AACAAAAGTCCCAATTAAGAACCTCCGAACTCTGTTTTGAG
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720455
mod ID: M6ASITE075480 Click to Show/Hide the Full List
mod site chr6:52501557-52501558:- [5]
Sequence GCGAAATTCTGTCTAAAAAAACAAAAGTCCCAATTAAGAAC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List rmsk_1949657; ENST00000182527.4
External Link RMBase: m6A_site_720456
mod ID: M6ASITE075481 Click to Show/Hide the Full List
mod site chr6:52501586-52501587:- [5]
Sequence ACCATGGCACTCCAGCCTGGACAACAAGAGCGAAATTCTGT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List rmsk_1949657; ENST00000182527.4
External Link RMBase: m6A_site_720457
mod ID: M6ASITE075482 Click to Show/Hide the Full List
mod site chr6:52501642-52501643:- [5]
Sequence GAGGCAGGAGAATCGCTTGAACCTAGAAGGCGGAGGTTGCA
Motif Score 2.930744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4; rmsk_1949657
External Link RMBase: m6A_site_720458
mod ID: M6ASITE075483 Click to Show/Hide the Full List
mod site chr6:52501887-52501888:- [5]
Sequence CCTTTTGGTGCCTTGTGAGGACTTTTAGAAGGGGCGTTCAG
Motif Score 4.065041667
Cell/Tissue List HeLa; Huh7; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720459
mod ID: M6ASITE075484 Click to Show/Hide the Full List
mod site chr6:52502016-52502017:- [5]
Sequence AGCATTTTAGACTGCATGAAACCATGACTGACTGAGAGTCA
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720460
mod ID: M6ASITE075485 Click to Show/Hide the Full List
mod site chr6:52502026-52502027:- [5]
Sequence GCACAACTACAGCATTTTAGACTGCATGAAACCATGACTGA
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; GM12878; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720461
mod ID: M6ASITE075486 Click to Show/Hide the Full List
mod site chr6:52502041-52502042:- [8]
Sequence ATTGTCGTTTTTTGAGCACAACTACAGCATTTTAGACTGCA
Motif Score 2.595904762
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720462
mod ID: M6ASITE075487 Click to Show/Hide the Full List
mod site chr6:52502102-52502103:- [5]
Sequence GTTCAGGGAGGGTCACTTGGACCGCTGTTCATCTGGCCGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720463
mod ID: M6ASITE075488 Click to Show/Hide the Full List
mod site chr6:52502165-52502166:- [5]
Sequence CTTCATCTCTAGCTGCAGAAACACTAAGTCTCAAGGGCTTC
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720464
mod ID: M6ASITE075489 Click to Show/Hide the Full List
mod site chr6:52502199-52502200:- [5]
Sequence CCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATC
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T; HepG2; U2OS; fibroblasts; A549; Huh7; HEK293A-TOA; iSLK; MSC; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720465
mod ID: M6ASITE075490 Click to Show/Hide the Full List
mod site chr6:52502272-52502273:- [5]
Sequence AGCATTCAAAACCAAACCAAACAGCAGTTCATATACCTGCC
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; GM12878; H1299; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720466
mod ID: M6ASITE075491 Click to Show/Hide the Full List
mod site chr6:52502277-52502278:- [5]
Sequence TCACAAGCATTCAAAACCAAACCAAACAGCAGTTCATATAC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; GM12878; H1299; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720467
mod ID: M6ASITE075492 Click to Show/Hide the Full List
mod site chr6:52502282-52502283:- [5]
Sequence GCCATTCACAAGCATTCAAAACCAAACCAAACAGCAGTTCA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; GM12878; H1299; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720468
mod ID: M6ASITE075493 Click to Show/Hide the Full List
mod site chr6:52502362-52502363:- [5]
Sequence AGAAAGGTAATGGTGGCAGAACCCACAGTGGAGTCGACCTA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; GM12878; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720469
mod ID: M6ASITE075494 Click to Show/Hide the Full List
mod site chr6:52502402-52502403:- [5]
Sequence TTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; fibroblasts; GM12878; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720470
mod ID: M6ASITE075495 Click to Show/Hide the Full List
mod site chr6:52502439-52502440:- [5]
Sequence CTGTCGCTCTGTGGGGGGGGACACGTCTTCCCACTGCTTAG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; fibroblasts; GM12878; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720471
mod ID: M6ASITE075496 Click to Show/Hide the Full List
mod site chr6:52502505-52502506:- [9]
Sequence GAACTCGGTTGGGTCCCGTGACTCGAGCTCCTACCAGTGGC
Motif Score 3.28175
Cell/Tissue List AML
Seq Type List miCLIP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720472
mod ID: M6ASITE075497 Click to Show/Hide the Full List
mod site chr6:52502523-52502524:- [5]
Sequence AATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720473
mod ID: M6ASITE075498 Click to Show/Hide the Full List
mod site chr6:52502550-52502551:- [6]
Sequence GCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T; CD8T; A549
Seq Type List MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720474
mod ID: M6ASITE075499 Click to Show/Hide the Full List
mod site chr6:52502555-52502556:- [8]
Sequence CCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAA
Motif Score 3.616982143
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720475
mod ID: M6ASITE075500 Click to Show/Hide the Full List
mod site chr6:52503008-52503009:- [5]
Sequence TTCCTCTTATTCTTCCACAAACCATTCTCAATAAAGCCAAA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720476
mod ID: M6ASITE075501 Click to Show/Hide the Full List
mod site chr6:52503078-52503079:- [5]
Sequence CTCCGTCTCAAACAGCCGAAACCTGTCTTGCAATGGGGGGA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; H1A; fibroblasts; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720477
mod ID: M6ASITE075502 Click to Show/Hide the Full List
mod site chr6:52503087-52503088:- [5]
Sequence CCTGTGATGCTCCGTCTCAAACAGCCGAAACCTGTCTTGCA
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; H1A; fibroblasts; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; MSC; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720478
mod ID: M6ASITE075503 Click to Show/Hide the Full List
mod site chr6:52503179-52503180:- [5]
Sequence CTAAGGCCAAAGTGCTAAGAACAGGAATCCTCTTGGTGGGG
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; hESCs; fibroblasts; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; MSC; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720479
mod ID: M6ASITE075504 Click to Show/Hide the Full List
mod site chr6:52503211-52503212:- [5]
Sequence ACCTCCCCACGGACTAAGAAACTCAAGTCTCCCTAAGGCCA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; hNPCs; hESCs; fibroblasts; A549; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720480
mod ID: M6ASITE075505 Click to Show/Hide the Full List
mod site chr6:52503219-52503220:- [5]
Sequence AGAACGGAACCTCCCCACGGACTAAGAAACTCAAGTCTCCC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; hNPCs; hESCs; fibroblasts; A549; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720481
mod ID: M6ASITE075506 Click to Show/Hide the Full List
mod site chr6:52503231-52503232:- [5]
Sequence TGGTGAAGGCAGAGAACGGAACCTCCCCACGGACTAAGAAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; H1B; hNPCs; hESCs; fibroblasts; A549; Huh7; Jurkat; peripheral-blood; HEK293A-TOA
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720482
mod ID: M6ASITE075507 Click to Show/Hide the Full List
mod site chr6:52504621-52504622:- [5]
Sequence AGAGTCCCAGCCACACCCAGACTACCAGCCAGGCTCATCAA
Motif Score 3.319380952
Cell/Tissue List HeLa; fibroblasts; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720483
mod ID: M6ASITE075508 Click to Show/Hide the Full List
mod site chr6:52505613-52505614:- [6]
Sequence TCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAGGTGAG
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720484
mod ID: M6ASITE075509 Click to Show/Hide the Full List
mod site chr6:52505619-52505620:- [5]
Sequence ATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720485
mod ID: M6ASITE075510 Click to Show/Hide the Full List
mod site chr6:52505646-52505647:- [5]
Sequence TGGACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGAGA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720486
mod ID: M6ASITE075511 Click to Show/Hide the Full List
mod site chr6:52505663-52505664:- [5]
Sequence GTGCTGGCCATTGGCTTTGGACTGGCTCGCATGGAAAACCA
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720487
mod ID: M6ASITE075512 Click to Show/Hide the Full List
mod site chr6:52506033-52506034:- [5]
Sequence GCAGATGAAAACAACGAGAAACTGTAAGTGGGTCTGCTGCA
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720488
mod ID: M6ASITE075513 Click to Show/Hide the Full List
mod site chr6:52506043-52506044:- [5]
Sequence CTTCTACTTTGCAGATGAAAACAACGAGAAACTGTAAGTGG
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720489
mod ID: M6ASITE075514 Click to Show/Hide the Full List
mod site chr6:52506066-52506067:- [5]
Sequence TTCCTCTTCCACACGGCTAGACTCTTCTACTTTGCAGATGA
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720490
mod ID: M6ASITE075515 Click to Show/Hide the Full List
mod site chr6:52509548-52509549:- [5]
Sequence CCCAAGAAGCCTCTGGGAAGACTACCCGCATGTGCACCTCC
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720491
mod ID: M6ASITE075516 Click to Show/Hide the Full List
mod site chr6:52509569-52509570:- [5]
Sequence GCAGGAAGGATACTTAACAAACCCAAGAAGCCTCTGGGAAG
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720492
mod ID: M6ASITE075517 Click to Show/Hide the Full List
mod site chr6:52516062-52516063:- [5]
Sequence AGCAAGTTCAATGAATCTGGACAGCTGGTCGTCTTTCATTT
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720493
mod ID: M6ASITE075518 Click to Show/Hide the Full List
mod site chr6:52516086-52516087:- [5]
Sequence CTTCATCTCTCCAAAGTCAAACACAGCAAGTTCAATGAATC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720494
mod ID: M6ASITE075520 Click to Show/Hide the Full List
mod site chr6:52535802-52535803:- [6]
Sequence ATTTATTTTACCTCAGTATAACATTAGCGTGCCTACAGCAG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720500
mod ID: M6ASITE075521 Click to Show/Hide the Full List
mod site chr6:52576844-52576845:- [6]
Sequence CGTCATCCACAACCATGCGGACATCGGCTTCTGCCTGGTGC
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720501
mod ID: M6ASITE075522 Click to Show/Hide the Full List
mod site chr6:52576996-52576997:- [5]
Sequence GGCGGCGGGCCGGCGGGCGGACCGGGCCGGTGCTGGAGAAG
Motif Score 3.622404762
Cell/Tissue List HeLa; GSC-11
Seq Type List m6A-seq
Transcript ID List ENST00000182527.4
External Link RMBase: m6A_site_720502