m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00608)
Target Name Pigment epithelium-derived factor (PEDF)
Synonyms
PEDF; Cell proliferation-inducing gene 35 protein; EPC-1; Serpin F1
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Gene Name PEDF
Chromosomal Location 17p13.3
Family Serpin family
Function
Neurotrophic protein; induces extensive neuronal differentiation in retinoblastoma cells. Potent inhibitor of angiogenesis. As it does not undergo the S (stressed) to R (relaxed) conformational transition characteristic of active serpins, it exhibits no serine protease inhibitory activity.
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Gene ID 5176
Uniprot ID
PEDF_HUMAN
HGNC ID
HGNC:8824
KEGG ID
hsa:5176
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
PEDF can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
 Regulator Info 
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line Caco-2 cell line Homo sapiens
Treatment: shMETTL3 Caco-2 cells
Control: shNTC Caco-2 cells
 GSE167075
Regulation
logFC: -9.30E-01
p-value: 1.13E-16
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between PEDF and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 8.75E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary Overexpressed Pigment epithelium-derived factor (PEDF) abrogates the inhibition of cell proliferation in DLBCL cells that is caused by METTL3 silence.
Target Regulation Up regulation
Responsed Disease Diffuse large B-cell lymphomas ICD-11: 2A81
 Disease Info 
In-vitro Model U-2932 Diffuse large B-cell lymphoma Homo sapiens CVCL_1896
SU-DHL-4 Diffuse large B-cell lymphoma Homo sapiens CVCL_0539
OCI-Ly10 Diffuse large B-cell lymphoma Homo sapiens CVCL_8795
HBL-1 [Human diffuse large B-cell lymphoma] Diffuse large B-cell lymphoma Homo sapiens CVCL_4213
GM12878 Human B lymphocytes Homo sapiens CVCL_7526
Farage Diffuse large B-cell lymphoma Homo sapiens CVCL_3302
Diffuse large B-cell lymphomas [ICD-11: 2A81]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary Overexpressed Pigment epithelium-derived factor (PEDF) abrogates the inhibition of cell proliferation in DLBCL cells that is caused by METTL3 silence.
Responsed Disease Diffuse large B-cell lymphomas [ICD-11: 2A81]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
 Regulator Info 
Target Regulation Up regulation
In-vitro Model U-2932 Diffuse large B-cell lymphoma Homo sapiens CVCL_1896
SU-DHL-4 Diffuse large B-cell lymphoma Homo sapiens CVCL_0539
OCI-Ly10 Diffuse large B-cell lymphoma Homo sapiens CVCL_8795
HBL-1 [Human diffuse large B-cell lymphoma] Diffuse large B-cell lymphoma Homo sapiens CVCL_4213
GM12878 Human B lymphocytes Homo sapiens CVCL_7526
Farage Diffuse large B-cell lymphoma Homo sapiens CVCL_3302
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00608)
Pigment epithelium-derived factor (PEDF)
Adenosine-to-Inosine editing (A-to-I)
In total 3 m6A sequence/site(s) in this target gene
mod ID: A2ISITE007631 Click to Show/Hide the Full List
mod site chr17:1763463-1763464:+ [2]
Sequence GACGAGAGCGGGGCTTGGATACTGCCCTTTGGACAGGATGG
Transcript ID List ENST00000576406.5; ENST00000254722.9; ENST00000571360.5; ENST00000571870.5; ENST00000570731.5; ENST00000573770.5; ENST00000571149.5
External Link RMBase: RNA-editing_site_54033
mod ID: A2ISITE007632 Click to Show/Hide the Full List
mod site chr17:1764017-1764018:+ [2]
Sequence CACGGTGAAACCCCATCTCTACTAAAACATAAAAATTAACC
Transcript ID List ENST00000573770.5; ENST00000571149.5; ENST00000570731.5; ENST00000576406.5; rmsk_4614635; ENST00000571360.5; ENST00000571870.5; ENST00000254722.9
External Link RMBase: RNA-editing_site_54034
mod ID: A2ISITE007633 Click to Show/Hide the Full List
mod site chr17:1765920-1765921:+ [2]
Sequence AACCCAGGATCTCTGACCCTAGGCCCTGCACTCCTAACCAT
Transcript ID List ENST00000571149.5; ENST00000254722.9; ENST00000571360.5; ENST00000576406.5; ENST00000570731.5; ENST00000571870.5; ENST00000573770.5
External Link RMBase: RNA-editing_site_54035
N6-methyladenosine (m6A)
In total 44 m6A sequence/site(s) in this target gene
mod ID: M6ASITE029455 Click to Show/Hide the Full List
mod site chr17:1766634-1766635:+ [3]
Sequence AGGAGGGTCCCCTGACGCAGACAGTGGAACAAAAGCACAAG
Motif Score 2.897386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000571870.5; ENST00000577053.1; ENST00000573770.5; ENST00000570731.5; ENST00000571360.5; ENST00000254722.9; ENST00000571149.5; ENST00000576406.5
External Link RMBase: m6A_site_340336
mod ID: M6ASITE029456 Click to Show/Hide the Full List
mod site chr17:1766642-1766643:+ [3]
Sequence CCCCTGACGCAGACAGTGGAACAAAAGCACAAGCTTATGGT
Motif Score 2.951386905
Cell/Tissue List HepG2
Seq Type List m6A-seq
Transcript ID List ENST00000571360.5; ENST00000576406.5; ENST00000571149.5; ENST00000573770.5; ENST00000577053.1; ENST00000570731.5; ENST00000254722.9; ENST00000571870.5
External Link RMBase: m6A_site_340337
mod ID: M6ASITE029457 Click to Show/Hide the Full List
mod site chr17:1766971-1766972:+ [4]
Sequence CGGGCACAGCAGCTGCCAGAACCCTGCCAGCCCCCCGGAGG
Motif Score 2.930744048
Cell/Tissue List HepG2; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571360.5; ENST00000573770.5; ENST00000570731.5; ENST00000577053.1; ENST00000571870.5; ENST00000576406.5; ENST00000571149.5; ENST00000254722.9
External Link RMBase: m6A_site_340338
mod ID: M6ASITE029458 Click to Show/Hide the Full List
mod site chr17:1769698-1769699:+ [4]
Sequence ATGCGTGATCAGGGAGTAAAACTCATTCCCGTTTTAGGCCA
Motif Score 2.627720238
Cell/Tissue List HepG2; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000577053.1; ENST00000570731.5; ENST00000573770.5; rmsk_4614654; ENST00000576406.5; ENST00000571149.5; ENST00000254722.9; ENST00000571360.5; ENST00000571870.5
External Link RMBase: m6A_site_340339
mod ID: M6ASITE029459 Click to Show/Hide the Full List
mod site chr17:1769720-1769721:+ [4]
Sequence TCATTCCCGTTTTAGGCCAAACACAGAAAAATTAGGAAGGA
Motif Score 2.20572619
Cell/Tissue List HepG2; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000570731.5; ENST00000571870.5; ENST00000573770.5; ENST00000254722.9; rmsk_4614654; ENST00000577053.1; ENST00000571149.5; ENST00000571360.5; ENST00000576406.5
External Link RMBase: m6A_site_340340
mod ID: M6ASITE029460 Click to Show/Hide the Full List
mod site chr17:1769740-1769741:+ [4]
Sequence ACACAGAAAAATTAGGAAGGACAGCCCCAAGGGGCCAGAAC
Motif Score 3.643047619
Cell/Tissue List HepG2; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000576406.5; ENST00000571360.5; ENST00000570731.5; ENST00000573770.5; ENST00000571870.5; ENST00000254722.9; ENST00000577053.1; ENST00000571149.5
External Link RMBase: m6A_site_340341
mod ID: M6ASITE029461 Click to Show/Hide the Full List
mod site chr17:1769759-1769760:+ [4]
Sequence GACAGCCCCAAGGGGCCAGAACCACCACCCTACACAAAGCC
Motif Score 2.930744048
Cell/Tissue List HepG2; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000577053.1; ENST00000570731.5; ENST00000571870.5; ENST00000571360.5; ENST00000573770.5; ENST00000254722.9; ENST00000576406.5; ENST00000571149.5
External Link RMBase: m6A_site_340342
mod ID: M6ASITE029462 Click to Show/Hide the Full List
mod site chr17:1769788-1769789:+ [4]
Sequence CTACACAAAGCCGTGAGGAGACAGTCCCTGTGCATCTCTGC
Motif Score 2.897386905
Cell/Tissue List HepG2; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000570731.5; ENST00000573770.5; ENST00000571360.5; ENST00000571870.5; ENST00000571149.5; ENST00000577053.1; ENST00000254722.9; ENST00000576406.5
External Link RMBase: m6A_site_340343
mod ID: M6ASITE029463 Click to Show/Hide the Full List
mod site chr17:1769819-1769820:+ [4]
Sequence GCATCTCTGCGAGTCCCTGAACTCAAACCCAAGACTTCCTG
Motif Score 3.373380952
Cell/Tissue List HepG2; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000577053.1; ENST00000576406.5; ENST00000571870.5; ENST00000571149.5; ENST00000254722.9; ENST00000570731.5; ENST00000571360.5; ENST00000573770.5
External Link RMBase: m6A_site_340344
mod ID: M6ASITE029464 Click to Show/Hide the Full List
mod site chr17:1769825-1769826:+ [4]
Sequence CTGCGAGTCCCTGAACTCAAACCCAAGACTTCCTGTCTCCT
Motif Score 2.185083333
Cell/Tissue List HepG2; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000570731.5; ENST00000576406.5; ENST00000571870.5; ENST00000254722.9; ENST00000573770.5; ENST00000571360.5; ENST00000577053.1; ENST00000571149.5
External Link RMBase: m6A_site_340345
mod ID: M6ASITE029465 Click to Show/Hide the Full List
mod site chr17:1769832-1769833:+ [4]
Sequence TCCCTGAACTCAAACCCAAGACTTCCTGTCTCCTGCCAGGG
Motif Score 3.319380952
Cell/Tissue List HepG2; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571149.5; ENST00000254722.9; ENST00000571360.5; ENST00000576406.5; ENST00000577053.1; ENST00000573770.5; ENST00000570731.5; ENST00000571870.5
External Link RMBase: m6A_site_340346
mod ID: M6ASITE029466 Click to Show/Hide the Full List
mod site chr17:1769861-1769862:+ [4]
Sequence CTCCTGCCAGGGCTCCCCAGACCCCGACAGCACAGGGGCGC
Motif Score 2.876744048
Cell/Tissue List HepG2; HEK293T; MSC; endometrial; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000571360.5; ENST00000571870.5; ENST00000570731.5; ENST00000254722.9; ENST00000571149.5; ENST00000573770.5; ENST00000577053.1; ENST00000576406.5
External Link RMBase: m6A_site_340347
mod ID: M6ASITE029467 Click to Show/Hide the Full List
mod site chr17:1769921-1769922:+ [5]
Sequence TTTCTTCAAAGTCCCCGTGAACAAGCTGGCAGCGGCTGTCT
Motif Score 2.951386905
Cell/Tissue List HepG2; hESC-HEK293T; Huh7; MSC; endometrial; MM6
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000577053.1; ENST00000571149.5; ENST00000571870.5; ENST00000573770.5; ENST00000576406.5; ENST00000570731.5; ENST00000571360.5; ENST00000254722.9
External Link RMBase: m6A_site_340348
mod ID: M6ASITE029468 Click to Show/Hide the Full List
mod site chr17:1771042-1771043:+ [6]
Sequence TGGCAGGAGCGGAGCAGCGAACAGAATCCATCATTCACCGG
Motif Score 2.951386905
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000576406.5; ENST00000571870.5; ENST00000570731.5; ENST00000254722.9; ENST00000573770.5; ENST00000571360.5; ENST00000570820.1; ENST00000577053.1
External Link RMBase: m6A_site_340349
mod ID: M6ASITE029469 Click to Show/Hide the Full List
mod site chr17:1771094-1771095:+ [7]
Sequence TGACTTGATCAGCAGCCCAGACATCCATGGTACCTATAAGG
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T; endometrial
Seq Type List MAZTER-seq; m6A-seq
Transcript ID List ENST00000571870.5; ENST00000571360.5; ENST00000570820.1; ENST00000576406.5; ENST00000573770.5; ENST00000570731.5; ENST00000254722.9
External Link RMBase: m6A_site_340350
mod ID: M6ASITE029470 Click to Show/Hide the Full List
mod site chr17:1771124-1771125:+ [7]
Sequence TACCTATAAGGAGCTCCTTGACACGGTCACTGCCCCCCAGA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000254722.9; ENST00000576406.5; ENST00000570731.5; ENST00000570820.1; ENST00000571870.5; ENST00000571360.5; ENST00000573770.5
External Link RMBase: m6A_site_340351
mod ID: M6ASITE029471 Click to Show/Hide the Full List
mod site chr17:1771148-1771149:+ [8]
Sequence GGTCACTGCCCCCCAGAAGAACCTCAAGAGTGCCTCCCGGA
Motif Score 2.930744048
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000570820.1; ENST00000571360.5; ENST00000254722.9; ENST00000576406.5; ENST00000571870.5; ENST00000573770.5
External Link RMBase: m6A_site_340352
mod ID: M6ASITE029472 Click to Show/Hide the Full List
mod site chr17:1771785-1771786:+ [8]
Sequence CAGGGCCTGCTGAGCGCTAAACCAGAACCCGAGCCTGGCAG
Motif Score 2.185083333
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000572048.1; ENST00000254722.9; ENST00000576406.5; ENST00000573763.1; ENST00000573770.5; ENST00000570820.1; ENST00000571870.5
External Link RMBase: m6A_site_340353
mod ID: M6ASITE029473 Click to Show/Hide the Full List
mod site chr17:1771791-1771792:+ [8]
Sequence CTGCTGAGCGCTAAACCAGAACCCGAGCCTGGCAGGCTCTC
Motif Score 2.930744048
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000573763.1; ENST00000572048.1; ENST00000571870.5; ENST00000576406.5; ENST00000573770.5; ENST00000254722.9; ENST00000570820.1
External Link RMBase: m6A_site_340354
mod ID: M6ASITE029474 Click to Show/Hide the Full List
mod site chr17:1771921-1771922:+ [8]
Sequence CTCTGGAAAAGTCATATGGGACCAGGCCCAGAGTCCTGACG
Motif Score 3.622404762
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000573770.5; ENST00000572048.1; ENST00000573763.1; ENST00000576406.5; ENST00000254722.9; ENST00000570820.1; ENST00000571870.5
External Link RMBase: m6A_site_340355
mod ID: M6ASITE029475 Click to Show/Hide the Full List
mod site chr17:1771958-1771959:+ [4]
Sequence GACGGGCAACCCTCGCTTGGACCTGCAAGAGATCAACAACT
Motif Score 3.622404762
Cell/Tissue List HepG2; MM6; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000573770.5; ENST00000576406.5; ENST00000572048.1; ENST00000254722.9; ENST00000570820.1; ENST00000573763.1
External Link RMBase: m6A_site_340356
mod ID: M6ASITE029476 Click to Show/Hide the Full List
mod site chr17:1771973-1771974:+ [7]
Sequence CTTGGACCTGCAAGAGATCAACAACTGGGTGCAGGCGCAGA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000573763.1; ENST00000576406.5; ENST00000572048.1; ENST00000570820.1; ENST00000254722.9
External Link RMBase: m6A_site_340357
mod ID: M6ASITE029477 Click to Show/Hide the Full List
mod site chr17:1772017-1772018:+ [7]
Sequence AAGGGAAGCTCGCCAGGTCCACAAAGGAAATTCCCGATGAG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000576406.5; ENST00000572048.1; ENST00000570820.1; ENST00000573763.1; ENST00000254722.9
External Link RMBase: m6A_site_340358
mod ID: M6ASITE029478 Click to Show/Hide the Full List
mod site chr17:1775068-1775069:+ [7]
Sequence TCTTTCCAGGGCAGTGGGTAACAAAGTTTGACTCCAGAAAG
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000576406.5; ENST00000254722.9; ENST00000573763.1; ENST00000572048.1
External Link RMBase: m6A_site_340359
mod ID: M6ASITE029479 Click to Show/Hide the Full List
mod site chr17:1775089-1775090:+ [4]
Sequence CAAAGTTTGACTCCAGAAAGACTTCCCTCGAGGATTTCTAC
Motif Score 3.319380952
Cell/Tissue List HepG2; MM6; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000576406.5; ENST00000573763.1; ENST00000572048.1; ENST00000254722.9
External Link RMBase: m6A_site_340360
mod ID: M6ASITE029480 Click to Show/Hide the Full List
mod site chr17:1775125-1775126:+ [8]
Sequence TCTACTTGGATGAAGAGAGGACCGTGAGGGTCCCCATGATG
Motif Score 3.622404762
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000576406.5; ENST00000254722.9; ENST00000573763.1; ENST00000572048.1
External Link RMBase: m6A_site_340361
mod ID: M6ASITE029481 Click to Show/Hide the Full List
mod site chr17:1775150-1775151:+ [8]
Sequence GAGGGTCCCCATGATGTCGGACCCTAAGGCTGTTTTACGCT
Motif Score 3.622404762
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000573763.1; ENST00000576406.5; ENST00000572048.1; ENST00000254722.9
External Link RMBase: m6A_site_340362
mod ID: M6ASITE029482 Click to Show/Hide the Full List
mod site chr17:1776501-1776502:+ [9]
Sequence CGGCTTTTGGGCTCTGAAGGACTAACCACATGCTTTCTCAC
Motif Score 4.065041667
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000576406.5; ENST00000572048.1; ENST00000573763.1; ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340363
mod ID: M6ASITE029483 Click to Show/Hide the Full List
mod site chr17:1776643-1776644:+ [7]
Sequence CACCTCCGAGTTCATTCATGACATAGACCGAGAACTGAAGA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000254722.9; ENST00000573763.1; ENST00000572517.1
External Link RMBase: m6A_site_340364
mod ID: M6ASITE029484 Click to Show/Hide the Full List
mod site chr17:1776649-1776650:+ [9]
Sequence CGAGTTCATTCATGACATAGACCGAGAACTGAAGACCGTGC
Motif Score 2.876744048
Cell/Tissue List HeLa; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000572517.1; ENST00000573763.1; ENST00000254722.9
External Link RMBase: m6A_site_340365
mod ID: M6ASITE029485 Click to Show/Hide the Full List
mod site chr17:1776656-1776657:+ [9]
Sequence ATTCATGACATAGACCGAGAACTGAAGACCGTGCAGGCGGT
Motif Score 3.373380952
Cell/Tissue List HeLa; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000572517.1; ENST00000254722.9; ENST00000573763.1
External Link RMBase: m6A_site_340366
mod ID: M6ASITE029486 Click to Show/Hide the Full List
mod site chr17:1776663-1776664:+ [9]
Sequence ACATAGACCGAGAACTGAAGACCGTGCAGGCGGTCCTCACT
Motif Score 2.876744048
Cell/Tissue List HeLa; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000573763.1; ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340367
mod ID: M6ASITE029487 Click to Show/Hide the Full List
mod site chr17:1777213-1777214:+ [9]
Sequence ATCCTTGTTTGATTCACCAGACTTTAGCAAGATCACAGGCA
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; Huh7; endometrial; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340368
mod ID: M6ASITE029488 Click to Show/Hide the Full List
mod site chr17:1777235-1777236:+ [9]
Sequence TTTAGCAAGATCACAGGCAAACCCATCAAGCTGACTCAGGT
Motif Score 2.185083333
Cell/Tissue List HeLa; HEK293T; Huh7; endometrial; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000572517.1; ENST00000254722.9
External Link RMBase: m6A_site_340369
mod ID: M6ASITE029489 Click to Show/Hide the Full List
mod site chr17:1777259-1777260:+ [9]
Sequence ATCAAGCTGACTCAGGTGGAACACCGGGCTGGCTTTGAGTG
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; MM6; Huh7; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340370
mod ID: M6ASITE029490 Click to Show/Hide the Full List
mod site chr17:1777299-1777300:+ [9]
Sequence GGAACGAGGATGGGGCGGGAACCACCCCCAGCCCAGGGCTG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; hESCs; MM6; Huh7; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340371
mod ID: M6ASITE029491 Click to Show/Hide the Full List
mod site chr17:1777348-1777349:+ [9]
Sequence CCACCTCACCTTCCCGCTGGACTATCACCTTAACCAGCCTT
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; hESCs; MM6; Huh7; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340372
mod ID: M6ASITE029492 Click to Show/Hide the Full List
mod site chr17:1777387-1777388:+ [5]
Sequence TTTCATCTTCGTACTGAGGGACACAGACACAGGGGCCCTTC
Motif Score 3.643047619
Cell/Tissue List HepG2; HEK293T; hESC-HEK293T; hESCs; MM6; Huh7; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340373
mod ID: M6ASITE029493 Click to Show/Hide the Full List
mod site chr17:1777393-1777394:+ [5]
Sequence CTTCGTACTGAGGGACACAGACACAGGGGCCCTTCTCTTCA
Motif Score 2.897386905
Cell/Tissue List HepG2; HEK293T; hESC-HEK293T; hESCs; MM6; Huh7; MSC; TREX; endometrial
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340374
mod ID: M6ASITE029494 Click to Show/Hide the Full List
mod site chr17:1777429-1777430:+ [10]
Sequence CTTCATTGGCAAGATTCTGGACCCCAGGGGCCCCTAATATC
Motif Score 3.622404762
Cell/Tissue List HEK293T; hNPCs; hESCs; MM6; Huh7; MSC; TREX; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000572517.1; ENST00000254722.9
External Link RMBase: m6A_site_340375
mod ID: M6ASITE029495 Click to Show/Hide the Full List
mod site chr17:1777481-1777482:+ [10]
Sequence TTCCAATACCCTAGAAGAAAACCCGAGGGACAGCAGATTCC
Motif Score 2.185083333
Cell/Tissue List HEK293T; hNPCs; Huh7; MSC; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340376
mod ID: M6ASITE029496 Click to Show/Hide the Full List
mod site chr17:1777490-1777491:+ [10]
Sequence CCTAGAAGAAAACCCGAGGGACAGCAGATTCCACAGGACAC
Motif Score 3.643047619
Cell/Tissue List HEK293T; hNPCs; Huh7; MSC; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340377
mod ID: M6ASITE029497 Click to Show/Hide the Full List
mod site chr17:1777507-1777508:+ [10]
Sequence GGGACAGCAGATTCCACAGGACACGAAGGCTGCCCCTGTAA
Motif Score 3.643047619
Cell/Tissue List HEK293T; hNPCs; Huh7; MSC; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000254722.9; ENST00000572517.1
External Link RMBase: m6A_site_340378
mod ID: M6ASITE029498 Click to Show/Hide the Full List
mod site chr17:1777541-1777542:+ [11]
Sequence CCTGTAAGGTTTCAATGCATACAATAAAAGAGCTTTATCCC
Motif Score 2.110482143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000572517.1; ENST00000254722.9
External Link RMBase: m6A_site_340379