m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00500)
Target Name Cyclin-dependent kinase inhibitor 2A (CDKN2A)
Synonyms
Cyclin-dependent kinase 4 inhibitor A; CDK4I; Multiple tumor suppressor 1; MTS-1; p16-INK4a; p16-INK4; p16INK4A
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Gene Name CDKN2A
Chromosomal Location 9p21.3
Family CDKN2 cyclin-dependent kinase inhibitor family
Function
Acts as a negative regulator of the proliferation of normal cells by interacting strongly with CDK4 and CDK6. This inhibits their ability to interact with cyclins D and to phosphorylate the retinoblastoma protein.
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Gene ID 1029
Uniprot ID
CDN2A_HUMAN
HGNC ID
HGNC:1787
KEGG ID
hsa:1029
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
CDKN2A can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
 Regulator Info 
Representative RIP-seq result supporting the interaction between CDKN2A and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 7.42E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary The decline in METTL3 levels was responsible for CTCL cell proliferation and migration,Cyclin-dependent kinase inhibitor 2A (CDKN2A) was a key regulator during this process in vitro and in vivo, and insufficient methylation modification blocked the interaction between CDKN2A and m6A reader IGF2BP2, resulting in mRNA degradation.
Target Regulation Up regulation
Responsed Disease Mature T-cell lymphoma ICD-11: 2A90
 Disease Info 
Cell Process Cell proliferation
Cell migration
Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) [READER]
 Regulator Info 
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary The decline in METTL3 levels was responsible for CTCL cell proliferation and migration,Cyclin-dependent kinase inhibitor 2A (CDKN2A) was a key regulator during this process in vitro and in vivo, and insufficient methylation modification blocked the interaction between CDKN2A and m6A reader IGF2BP2, resulting in mRNA degradation.
Target Regulation Up regulation
Responsed Disease Mature T-cell lymphoma ICD-11: 2A90
 Disease Info 
Cell Process Cell proliferation
Cell migration
YTH domain-containing family protein 2 (YTHDF2) [READER]
 Regulator Info 
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [3]
Response Summary CircMET enhances mRNA decay of Cyclin-dependent kinase inhibitor 2A (CDKN2A) by direct interaction and recruitment of YTHDF2. CircMET promotes the development of NONO-TFE3 tRCC, and the regulation to both CDKN2A and SMAD3 of circMET was revealed.
Target Regulation Down regulation
Responsed Disease Renal cell carcinoma ICD-11: 2C90
 Disease Info 
Cell Process RNA stability
In-vitro Model UOK120 Papillary renal cell carcinoma Homo sapiens CVCL_B099
UOK109 Renal cell carcinoma Homo sapiens CVCL_B087
HK-2 [Human kidney] Normal Homo sapiens CVCL_0302
HEK293T Normal Homo sapiens CVCL_0063
ACHN Papillary renal cell carcinoma Homo sapiens CVCL_1067
786-O Renal cell carcinoma Homo sapiens CVCL_1051
In-vivo Model The mice were subcutaneously inoculated with 786-O cells stably transfected with lentiviruses carrying sh-NC/sh-circMET, respectively (5 × 106, 200 uL).
Mature T-cell lymphoma [ICD-11: 2A90]
 Disease Info 
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary The decline in METTL3 levels was responsible for CTCL cell proliferation and migration,Cyclin-dependent kinase inhibitor 2A (CDKN2A) was a key regulator during this process in vitro and in vivo, and insufficient methylation modification blocked the interaction between CDKN2A and m6A reader IGF2BP2, resulting in mRNA degradation.
Responsed Disease Mature T-cell lymphoma [ICD-11: 2A90]
Target Regulator Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2) READER
 Regulator Info 
Target Regulation Up regulation
Cell Process Cell proliferation
Cell migration
Experiment 2 Reporting the m6A-centered Disease Response [1]
Response Summary The decline in METTL3 levels was responsible for CTCL cell proliferation and migration,Cyclin-dependent kinase inhibitor 2A (CDKN2A) was a key regulator during this process in vitro and in vivo, and insufficient methylation modification blocked the interaction between CDKN2A and m6A reader IGF2BP2, resulting in mRNA degradation.
Responsed Disease Mature T-cell lymphoma [ICD-11: 2A90]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
 Regulator Info 
Target Regulation Up regulation
Cell Process Cell proliferation
Cell migration
Renal cell carcinoma [ICD-11: 2C90]
 Disease Info 
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [3]
Response Summary CircMET enhances mRNA decay of Cyclin-dependent kinase inhibitor 2A (CDKN2A) by direct interaction and recruitment of YTHDF2. CircMET promotes the development of NONO-TFE3 tRCC, and the regulation to both CDKN2A and SMAD3 of circMET was revealed.
Responsed Disease Renal cell carcinoma [ICD-11: 2C90]
Target Regulator YTH domain-containing family protein 2 (YTHDF2) READER
 Regulator Info 
Target Regulation Down regulation
Cell Process RNA stability
In-vitro Model UOK120 Papillary renal cell carcinoma Homo sapiens CVCL_B099
UOK109 Renal cell carcinoma Homo sapiens CVCL_B087
HK-2 [Human kidney] Normal Homo sapiens CVCL_0302
HEK293T Normal Homo sapiens CVCL_0063
ACHN Papillary renal cell carcinoma Homo sapiens CVCL_1067
786-O Renal cell carcinoma Homo sapiens CVCL_1051
In-vivo Model The mice were subcutaneously inoculated with 786-O cells stably transfected with lentiviruses carrying sh-NC/sh-circMET, respectively (5 × 106, 200 uL).
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00500)
Cyclin-dependent kinase inhibitor 2A (CDKN2A)
Adenosine-to-Inosine editing (A-to-I)
In total 2 m6A sequence/site(s) in this target gene
mod ID: A2ISITE003105 Click to Show/Hide the Full List
mod site chr9:21976619-21976620:- [4]
Sequence TGGGTTCAAGCGATTCTCCTACATCAGCCTCCGAGTAGCTG
Transcript ID List ENST00000579755.1; ENST00000530628.2; ENST00000494262.5; ENST00000498628.6
External Link RMBase: RNA-editing_site_134645
mod ID: A2ISITE003106 Click to Show/Hide the Full List
mod site chr9:21977461-21977462:- [5]
Sequence GAGGCAGGAGAATTGCTCGAACCCGGGAGGCGGAGGTTGCA
Transcript ID List ENST00000579755.1; rmsk_2718084; ENST00000530628.2; ENST00000498628.6; ENST00000494262.5
External Link RMBase: RNA-editing_site_134646
2'-O-Methylation (2'-O-Me)
In total 3 m6A sequence/site(s) in this target gene
mod ID: 2OMSITE000503 Click to Show/Hide the Full List
mod site chr9:21968203-21968204:- [6]
Sequence ACCAGAGAGGCTCTGAGAAACCTCGGGAAACTTAGATCATC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000578845.2; ENST00000530628.2; ENST00000579755.1; ENST00000304494.9; ENST00000494262.5; ENST00000498628.6; ENST00000380151.3; ENST00000579122.1; ENST00000498124.1
External Link RMBase: Nm_site_6589
mod ID: 2OMSITE000502 Click to Show/Hide the Full List
mod site chr9:21968192-21968193:- [6]
Sequence TCTGAGAAACCTCGGGAAACTTAGATCATCAGTCACCGAAG
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000498124.1; ENST00000579755.1; ENST00000579122.1; ENST00000304494.9; ENST00000498628.6; ENST00000578845.2; ENST00000494262.5; ENST00000530628.2; ENST00000380151.3
External Link RMBase: Nm_site_6588
mod ID: 2OMSITE000504 Click to Show/Hide the Full List
mod site chr9:21974784-21974785:- [6]
Sequence GCATGGAGCCTTCGGCTGACTGGCTGGCCACGGCCGCGGCC
Cell/Tissue List HeLa
Seq Type List Nm-seq
Transcript ID List ENST00000498628.6; ENST00000498124.1; ENST00000494262.5; ENST00000530628.2; ENST00000304494.9; ENST00000380151.3; ENST00000579122.1; ENST00000579755.1
External Link RMBase: Nm_site_6590
5-methylcytidine (m5C)
In total 8 m6A sequence/site(s) in this target gene
mod ID: M5CSITE004386 Click to Show/Hide the Full List
mod site chr9:21970907-21970908:- [7]
Sequence GCATAGATGCCGCGGAAGGTCCCTCAGGTGAGGACTGATGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000479692.2; ENST00000494262.5; ENST00000498628.6; ENST00000579755.1; ENST00000498124.1; ENST00000380151.3; ENST00000578845.2; ENST00000304494.9; ENST00000497750.1; ENST00000579122.1; ENST00000380150.2; ENST00000530628.2
External Link RMBase: m5C_site_42397
mod ID: M5CSITE004387 Click to Show/Hide the Full List
mod site chr9:21971214-21971215:- [7]
Sequence CTCTGACCATTCTGTTCTCTCTGGCAGGTCATGATGATGGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000380150.2; ENST00000304494.9; ENST00000579122.1; ENST00000494262.5; ENST00000498628.6; ENST00000479692.2; ENST00000498124.1; ENST00000579755.1; ENST00000380151.3; ENST00000578845.2; ENST00000530628.2; ENST00000497750.1
External Link RMBase: m5C_site_42398
mod ID: M5CSITE004388 Click to Show/Hide the Full List
mod site chr9:21971218-21971219:- [7]
Sequence CTGGCTCTGACCATTCTGTTCTCTCTGGCAGGTCATGATGA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000579122.1; ENST00000498124.1; ENST00000497750.1; ENST00000498628.6; ENST00000479692.2; ENST00000304494.9; ENST00000494262.5; ENST00000579755.1; ENST00000380150.2; ENST00000380151.3; ENST00000578845.2; ENST00000530628.2
External Link RMBase: m5C_site_42399
mod ID: M5CSITE004389 Click to Show/Hide the Full List
mod site chr9:21974713-21974714:- [7]
Sequence CTGGAGGCGGGGGCGCTGCCCAACGCACCGAATAGTTACGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000530628.2; ENST00000579122.1; ENST00000304494.9; ENST00000380151.3; ENST00000498628.6; ENST00000494262.5; ENST00000498124.1; ENST00000579755.1
External Link RMBase: m5C_site_42400
mod ID: M5CSITE004390 Click to Show/Hide the Full List
mod site chr9:21974714-21974715:- [7]
Sequence GCTGGAGGCGGGGGCGCTGCCCAACGCACCGAATAGTTACG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000579755.1; ENST00000498124.1; ENST00000498628.6; ENST00000380151.3; ENST00000494262.5; ENST00000530628.2; ENST00000304494.9; ENST00000579122.1
External Link RMBase: m5C_site_42401
mod ID: M5CSITE004391 Click to Show/Hide the Full List
mod site chr9:21974715-21974716:- [7]
Sequence TGCTGGAGGCGGGGGCGCTGCCCAACGCACCGAATAGTTAC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000494262.5; ENST00000579122.1; ENST00000579755.1; ENST00000498124.1; ENST00000304494.9; ENST00000530628.2; ENST00000380151.3; ENST00000498628.6
External Link RMBase: m5C_site_42402
mod ID: M5CSITE004392 Click to Show/Hide the Full List
mod site chr9:21974718-21974719:- [7]
Sequence CGCTGCTGGAGGCGGGGGCGCTGCCCAACGCACCGAATAGT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000494262.5; ENST00000498628.6; ENST00000579755.1; ENST00000304494.9; ENST00000498124.1; ENST00000530628.2; ENST00000579122.1; ENST00000380151.3
External Link RMBase: m5C_site_42403
mod ID: M5CSITE004393 Click to Show/Hide the Full List
mod site chr9:21974720-21974721:- [7]
Sequence GGCGCTGCTGGAGGCGGGGGCGCTGCCCAACGCACCGAATA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000498124.1; ENST00000498628.6; ENST00000579755.1; ENST00000304494.9; ENST00000530628.2; ENST00000579122.1; ENST00000494262.5; ENST00000380151.3
External Link RMBase: m5C_site_42404
N6-methyladenosine (m6A)
In total 40 m6A sequence/site(s) in this target gene
mod ID: M6ASITE087760 Click to Show/Hide the Full List
mod site chr9:21967816-21967817:- [8]
Sequence TTACTGGCTTCTCTTGAGTCACACTGCTAGCAAATGGCAGA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000579755.1; ENST00000304494.9
External Link RMBase: m6A_site_817776
mod ID: M6ASITE087761 Click to Show/Hide the Full List
mod site chr9:21967871-21967872:- [8]
Sequence CGGAAGCTGTCGACTTCATGACAAGCATTTTGTGAACTAGG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000304494.9; ENST00000579755.1
External Link RMBase: m6A_site_817777
mod ID: M6ASITE087762 Click to Show/Hide the Full List
mod site chr9:21967879-21967880:- [9]
Sequence GCAGCCTCCGGAAGCTGTCGACTTCATGACAAGCATTTTGT
Motif Score 3.287565476
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000579755.1; ENST00000304494.9
External Link RMBase: m6A_site_817778
mod ID: M6ASITE087763 Click to Show/Hide the Full List
mod site chr9:21967929-21967930:- [8]
Sequence AGCACTCACGCCCTAAGCGCACATTCATGTGGGCATTTCTT
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000579755.1; ENST00000304494.9
External Link RMBase: m6A_site_817779
mod ID: M6ASITE087764 Click to Show/Hide the Full List
mod site chr9:21967992-21967993:- [8]
Sequence TAAAAATGTAAAAAAGAAAAACACCGCTTCTGCCTTTTCAC
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000579122.1; ENST00000579755.1; ENST00000304494.9
External Link RMBase: m6A_site_817780
mod ID: M6ASITE087765 Click to Show/Hide the Full List
mod site chr9:21968052-21968053:- [9]
Sequence GATATATGCCTTCCCCCACTACCGTAAATGTCCATTTATAT
Motif Score 2.05802381
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000530628.2; ENST00000579755.1; ENST00000579122.1; ENST00000578845.2; ENST00000304494.9
External Link RMBase: m6A_site_817781
mod ID: M6ASITE087766 Click to Show/Hide the Full List
mod site chr9:21968055-21968056:- [9]
Sequence GTAGATATATGCCTTCCCCCACTACCGTAAATGTCCATTTA
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000530628.2; ENST00000579755.1; ENST00000579122.1; ENST00000304494.9; ENST00000498124.1; ENST00000578845.2
External Link RMBase: m6A_site_817782
mod ID: M6ASITE087767 Click to Show/Hide the Full List
mod site chr9:21968077-21968078:- [9]
Sequence TAAAAATGTCCTGCCTTTTAACGTAGATATATGCCTTCCCC
Motif Score 2.142029762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000498124.1; ENST00000578845.2; ENST00000304494.9; ENST00000530628.2; ENST00000579122.1; ENST00000579755.1
External Link RMBase: m6A_site_817783
mod ID: M6ASITE087768 Click to Show/Hide the Full List
mod site chr9:21968143-21968144:- [9]
Sequence GGGCCACAACTGCCCCCGCCACAACCCACCCCGCTTTCGTA
Motif Score 2.053113095
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000579755.1; ENST00000530628.2; ENST00000498628.6; ENST00000579122.1; ENST00000498124.1; ENST00000578845.2; ENST00000304494.9
External Link RMBase: m6A_site_817784
mod ID: M6ASITE087769 Click to Show/Hide the Full List
mod site chr9:21968155-21968156:- [9]
Sequence GAAGGTCCTACAGGGCCACAACTGCCCCCGCCACAACCCAC
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000579755.1; ENST00000498628.6; ENST00000530628.2; ENST00000579122.1; ENST00000578845.2; ENST00000498124.1; ENST00000304494.9
External Link RMBase: m6A_site_817785
mod ID: M6ASITE087770 Click to Show/Hide the Full List
mod site chr9:21968194-21968195:- [10]
Sequence GCTCTGAGAAACCTCGGGAAACTTAGATCATCAGTCACCGA
Motif Score 2.627720238
Cell/Tissue List HepG2; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000498628.6; ENST00000380151.3; ENST00000304494.9; ENST00000579122.1; ENST00000530628.2; ENST00000494262.5; ENST00000498124.1; ENST00000578845.2; ENST00000579755.1
External Link RMBase: m6A_site_817786
mod ID: M6ASITE087771 Click to Show/Hide the Full List
mod site chr9:21968204-21968205:- [10]
Sequence AACCAGAGAGGCTCTGAGAAACCTCGGGAAACTTAGATCAT
Motif Score 2.185083333
Cell/Tissue List HepG2; MM6; Huh7; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000380151.3; ENST00000494262.5; ENST00000579122.1; ENST00000304494.9; ENST00000530628.2; ENST00000579755.1; ENST00000498124.1; ENST00000498628.6; ENST00000578845.2
External Link RMBase: m6A_site_817787
mod ID: M6ASITE087772 Click to Show/Hide the Full List
mod site chr9:21968223-21968224:- [10]
Sequence AGACATCCCCGATTGAAAGAACCAGAGAGGCTCTGAGAAAC
Motif Score 2.930744048
Cell/Tissue List HepG2; MM6; Huh7; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579122.1; ENST00000579755.1; ENST00000530628.2; ENST00000498124.1; ENST00000380151.3; ENST00000304494.9; ENST00000498628.6; ENST00000494262.5; ENST00000578845.2
External Link RMBase: m6A_site_817788
mod ID: M6ASITE087773 Click to Show/Hide the Full List
mod site chr9:21968241-21968242:- [8]
Sequence TTTCTTTCTGCCCTCTGCAGACATCCCCGATTGAAAGAACC
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000494262.5; ENST00000578845.2; ENST00000380151.3; ENST00000498628.6; ENST00000530628.2; ENST00000304494.9; ENST00000498124.1; ENST00000579755.1; ENST00000579122.1
External Link RMBase: m6A_site_817789
mod ID: M6ASITE087774 Click to Show/Hide the Full List
mod site chr9:21970894-21970895:- [11]
Sequence GGAAGGTCCCTCAGGTGAGGACTGATGATCTGAGAATTTGT
Motif Score 4.065041667
Cell/Tissue List HeLa; MM6; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000380151.3; ENST00000498124.1; ENST00000578845.2; ENST00000494262.5; ENST00000530628.2; ENST00000304494.9; ENST00000497750.1; ENST00000579122.1; ENST00000498628.6; ENST00000380150.2; ENST00000479692.2; ENST00000579755.1
External Link RMBase: m6A_site_817790
mod ID: M6ASITE087775 Click to Show/Hide the Full List
mod site chr9:21970936-21970937:- [9]
Sequence GGGGGGCACCAGAGGCAGTAACCATGCCCGCATAGATGCCG
Motif Score 2.147452381
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000380150.2; ENST00000530628.2; ENST00000304494.9; ENST00000380151.3; ENST00000498628.6; ENST00000578845.2; ENST00000579122.1; ENST00000498124.1; ENST00000479692.2; ENST00000494262.5; ENST00000497750.1; ENST00000579755.1
External Link RMBase: m6A_site_817791
mod ID: M6ASITE087776 Click to Show/Hide the Full List
mod site chr9:21971011-21971012:- [11]
Sequence CTGGGGCCGTCTGCCCGTGGACCTGGCTGAGGAGCTGGGCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; MM6; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000497750.1; ENST00000579122.1; ENST00000380151.3; ENST00000579755.1; ENST00000498628.6; ENST00000494262.5; ENST00000530628.2; ENST00000578845.2; ENST00000479692.2; ENST00000304494.9; ENST00000380150.2; ENST00000498124.1
External Link RMBase: m6A_site_817792
mod ID: M6ASITE087777 Click to Show/Hide the Full List
mod site chr9:21971083-21971084:- [11]
Sequence TGCCCGGGAGGGCTTCCTGGACACGCTGGTGGTGCTGCACC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; hESC-HEK293T; MM6; peripheral-blood; endometrial
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000530628.2; ENST00000579755.1; ENST00000304494.9; ENST00000497750.1; ENST00000578845.2; ENST00000380151.3; ENST00000479692.2; ENST00000498628.6; ENST00000380150.2; ENST00000494262.5; ENST00000498124.1; ENST00000579122.1
External Link RMBase: m6A_site_817793
mod ID: M6ASITE087778 Click to Show/Hide the Full List
mod site chr9:21971107-21971108:- [9]
Sequence TCTCACCCGACCCGTGCACGACGCTGCCCGGGAGGGCTTCC
Motif Score 2.839505952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000380150.2; ENST00000530628.2; ENST00000578845.2; ENST00000479692.2; ENST00000579122.1; ENST00000494262.5; ENST00000497750.1; ENST00000498628.6; ENST00000304494.9; ENST00000380151.3; ENST00000498124.1; ENST00000579755.1
External Link RMBase: m6A_site_817794
mod ID: M6ASITE087779 Click to Show/Hide the Full List
mod site chr9:21974527-21974528:- [12]
Sequence GAAGGGGTTTGTAATCACAGACCTCCTCCTGGCGACGCCCT
Motif Score 2.876744048
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000498628.6; ENST00000494262.5; ENST00000579122.1; ENST00000380151.3; ENST00000498124.1; ENST00000304494.9; ENST00000579755.1; ENST00000530628.2
External Link RMBase: m6A_site_817795
mod ID: M6ASITE087780 Click to Show/Hide the Full List
mod site chr9:21974887-21974888:- [11]
Sequence GTCACCAGAGGGTGGGGCGGACCGCGTGCGCTCGGCGGCTG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; fibroblasts; MM6; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000304494.9; ENST00000494262.5; ENST00000579755.1; ENST00000530628.2; ENST00000498628.6
External Link RMBase: m6A_site_817796
mod ID: M6ASITE087781 Click to Show/Hide the Full List
mod site chr9:21974966-21974967:- [11]
Sequence CCCTCCAGAGGATTTGAGGGACAGGGTCGGAGGGGGCTCTT
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; MM6; HEK293T; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000304494.9; ENST00000530628.2; ENST00000498628.6; ENST00000579755.1; ENST00000494262.5
External Link RMBase: m6A_site_817797
mod ID: M6ASITE087782 Click to Show/Hide the Full List
mod site chr9:21989543-21989544:- [11]
Sequence CCCTTCCAAGCCAGATGGAGACCCAAGAGTGTTGAAAGGCC
Motif Score 2.876744048
Cell/Tissue List HeLa; peripheral-blood; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000494262.5; ENST00000579755.1; ENST00000498628.6; ENST00000470819.2; ENST00000530628.2
External Link RMBase: m6A_site_817798
mod ID: M6ASITE087783 Click to Show/Hide the Full List
mod site chr9:21989584-21989585:- [11]
Sequence GGGGAAAGTGCGCTTCTGAGACTCTTGACAGCCATTTCGTT
Motif Score 3.319380952
Cell/Tissue List HeLa; MM6; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000494262.5; ENST00000470819.2; ENST00000530628.2; ENST00000579755.1; ENST00000498628.6
External Link RMBase: m6A_site_817799
mod ID: M6ASITE087784 Click to Show/Hide the Full List
mod site chr9:21989609-21989610:- [11]
Sequence AGTCAGGGTTACCCGGAGGAACCACGGGGAAAGTGCGCTTC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; GM12878; MM6; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000579755.1; ENST00000498628.6; ENST00000530628.2; ENST00000494262.5; ENST00000470819.2
External Link RMBase: m6A_site_817800
mod ID: M6ASITE087785 Click to Show/Hide the Full List
mod site chr9:21989673-21989674:- [11]
Sequence GGTCACCTCTCCAGCTTGGAACTGGCTAGGCCTTGTTTTGG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; GM12878; MM6; peripheral-blood; HEK293A-TOA; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530628.2; ENST00000579755.1; ENST00000470819.2; ENST00000494262.5; ENST00000498628.6
External Link RMBase: m6A_site_817801
mod ID: M6ASITE087786 Click to Show/Hide the Full List
mod site chr9:21989714-21989715:- [11]
Sequence GACTCGAGACGAAAGGCAGGACATGACAGAAGGCAACTCTG
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; HepG2; GM12878; MM6; peripheral-blood; HEK293A-TOA; TIME; TREX; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530628.2; ENST00000579755.1; ENST00000470819.2; ENST00000498628.6; ENST00000494262.5
External Link RMBase: m6A_site_817802
mod ID: M6ASITE087787 Click to Show/Hide the Full List
mod site chr9:21989733-21989734:- [11]
Sequence AGTCTGAGTGGGGTTAGTGGACTCGAGACGAAAGGCAGGAC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; HepG2; GM12878; MM6; peripheral-blood; HEK293A-TOA; TIME; TREX; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530628.2; ENST00000494262.5; ENST00000470819.2; ENST00000579755.1; ENST00000498628.6
External Link RMBase: m6A_site_817803
mod ID: M6ASITE087788 Click to Show/Hide the Full List
mod site chr9:21989757-21989758:- [11]
Sequence CGCGGTGGGGGTGGGAGCAGACAGAGTCTGAGTGGGGTTAG
Motif Score 2.897386905
Cell/Tissue List HeLa; HEK293T; HepG2; GM12878; MM6; peripheral-blood; HEK293A-TOA; TIME; TREX; MSC
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000494262.5; ENST00000530628.2; ENST00000579755.1; ENST00000498628.6; ENST00000470819.2
External Link RMBase: m6A_site_817804
mod ID: M6ASITE087789 Click to Show/Hide the Full List
mod site chr9:21989818-21989819:- [11]
Sequence ATCCGTTATCATAACTGCGGACCTGGGGTTCCACGTGGAAG
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; GM12878; MM6; peripheral-blood; HEK293A-TOA; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000494262.5; ENST00000530628.2; ENST00000470819.2; ENST00000579755.1; ENST00000498628.6
External Link RMBase: m6A_site_817805
mod ID: M6ASITE087790 Click to Show/Hide the Full List
mod site chr9:21994142-21994143:- [11]
Sequence CAGCAGCCGCTTCCTAGAAGACCAGGTAGGAAAGGCCCTCG
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000470819.2; ENST00000494262.5; ENST00000579755.1; ENST00000498628.6; ENST00000530628.2
External Link RMBase: m6A_site_817806
mod ID: M6ASITE087791 Click to Show/Hide the Full List
mod site chr9:21994254-21994255:- [8]
Sequence AGTGAGGGTTTTCGTGGTTCACATCCCGCGGCTCACGGGGG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000494262.5; ENST00000579755.1; ENST00000498628.6; ENST00000470819.2; ENST00000530628.2
External Link RMBase: m6A_site_817807
mod ID: M6ASITE087792 Click to Show/Hide the Full List
mod site chr9:21994332-21994333:- [11]
Sequence CGGCCCTGGAGGCGGCGAGAACATGGTGCGCAGGTTCTTGG
Motif Score 2.951386905
Cell/Tissue List HeLa; hESC-HEK293T; HepG2; MM6; peripheral-blood; HEK293A-TOA; HEC-1-A
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000494262.5; ENST00000470819.2; ENST00000579755.1; ENST00000530628.2; ENST00000498628.6
External Link RMBase: m6A_site_817811
mod ID: M6ASITE087793 Click to Show/Hide the Full List
mod site chr9:21994912-21994913:-
Sequence TCTAGTTTGAAGAATGGAAGACTTTCGACGAGGGGAGCCAG
Motif Score 3.319380952
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000494262.5; ENST00000498628.6
External Link RMBase: m6A_site_817813
mod ID: M6ASITE087794 Click to Show/Hide the Full List
mod site chr9:21995013-21995014:- [13]
Sequence GGAGCGGCTTTTAGTTCAAAACTGACATTCAGCCTCCTGAT
Motif Score 2.627720238
Cell/Tissue List HEK293T; HeLa; Huh7; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000498628.6; ENST00000494262.5
External Link RMBase: m6A_site_817815
mod ID: M6ASITE087795 Click to Show/Hide the Full List
mod site chr9:21995184-21995185:- [13]
Sequence GGCGCCCGGACCCAGCTGGGACCCCCGGGTGCGACTCCACC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494262.5; ENST00000498628.6
External Link RMBase: m6A_site_817822
mod ID: M6ASITE087796 Click to Show/Hide the Full List
mod site chr9:21995195-21995196:- [13]
Sequence GGAGGGGAATGGGCGCCCGGACCCAGCTGGGACCCCCGGGT
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000498628.6; ENST00000494262.5
External Link RMBase: m6A_site_817823
mod ID: M6ASITE087797 Click to Show/Hide the Full List
mod site chr9:21995262-21995263:- [13]
Sequence AAATGGGCTAGACACAAAGGACTCGGTGCTTGTCCCAGCCA
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293A-TOA
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494262.5; ENST00000498628.6
External Link RMBase: m6A_site_817824
mod ID: M6ASITE087798 Click to Show/Hide the Full List
mod site chr9:21995271-21995272:- [13]
Sequence CGAAAATAAAAATGGGCTAGACACAAAGGACTCGGTGCTTG
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List MeRIP-seq
Transcript ID List ENST00000498628.6
External Link RMBase: m6A_site_817825
mod ID: M6ASITE087799 Click to Show/Hide the Full List
mod site chr9:21995293-21995294:- [13]
Sequence CGGCTGTCGTGAAGGTTAAAACCGAAAATAAAAATGGGCTA
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List MeRIP-seq
Transcript ID List ENST00000498628.6
External Link RMBase: m6A_site_817826