General Information of the m6A Target Gene (ID: M6ATAR00492)
Target Name Leukocyte surface antigen CD47 (CD47)
Synonyms
Antigenic surface determinant protein OA3; Integrin-associated protein; IAP; Protein MER6; CD47
    Click to Show/Hide
Gene Name CD47
Chromosomal Location 3q13.12
Function
Has a role in both cell adhesion by acting as an adhesion receptor for THBS1 on platelets, and in the modulation of integrins. Plays an important role in memory formation and synaptic plasticity in the hippocampus (By similarity). Receptor for SIRPA, binding to which prevents maturation of immature dendritic cells and inhibits cytokine production by mature dendritic cells. Interaction with SIRPG mediates cell-cell adhesion, enhances superantigen-dependent T-cell-mediated proliferation and costimulates T-cell activation. May play a role in membrane transport and/or integrin dependent signal transduction. May prevent premature elimination of red blood cells. May be involved in membrane permeability changes induced following virus infection.
    Click to Show/Hide
Gene ID 961
Uniprot ID
CD47_HUMAN
HGNC ID
HGNC:1682
KEGG ID
hsa:961
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
CD47 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
Browse Regulator
Browse Disease
Methyltransferase-like 3 (METTL3) [WRITER]
Representative RNA-seq result indicating the expression of this target gene regulated by METTL3
Cell Line Caco-2 cell line Homo sapiens
Treatment: shMETTL3 Caco-2 cells
Control: shNTC Caco-2 cells
GSE167075
Regulation
logFC: 1.18E+00
p-value: 9.07E-25
More Results Click to View More RNA-seq Results
Representative RIP-seq result supporting the interaction between CD47 and the regulator
Cell Line MDA-MB-231 Homo sapiens
Regulation logFC: 4.98E+00 GSE60213
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3/IGF2BP1/Leukocyte surface antigen CD47 (CD47) mediated EMT transition contributes to the incomplete ablation induced metastasis in HCC cells.
Target Regulation Up regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
Cell Process Epithelial-mesenchymal transition
In-vitro Model Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) [READER]
Representative RNA-seq result indicating the expression of this target gene regulated by IGF2BP1
Cell Line PANC-1 cell line Homo sapiens
Treatment: siIGF2BP1 PANC-1 cells
Control: siControl PANC-1 cells
GSE161087
Regulation
logFC: -8.42E-01
p-value: 5.16E-03
More Results Click to View More RNA-seq Results
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary METTL3/IGF2BP1/Leukocyte surface antigen CD47 (CD47) mediated EMT transition contributes to the incomplete ablation induced metastasis in HCC cells.
Target Regulation Up regulation
Responsed Disease Hepatocellular carcinoma ICD-11: 2C12.02
Cell Process Epithelial-mesenchymal transition
In-vitro Model Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
Liver cancer [ICD-11: 2C12]
In total 2 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3/IGF2BP1/Leukocyte surface antigen CD47 (CD47) mediated EMT transition contributes to the incomplete ablation induced metastasis in HCC cells.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) READER
Target Regulation Up regulation
Cell Process Epithelial-mesenchymal transition
In-vitro Model Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
Experiment 2 Reporting the m6A-centered Disease Response [1]
Response Summary METTL3/IGF2BP1/Leukocyte surface antigen CD47 (CD47) mediated EMT transition contributes to the incomplete ablation induced metastasis in HCC cells.
Responsed Disease Hepatocellular carcinoma [ICD-11: 2C12.02]
Target Regulator Methyltransferase-like 3 (METTL3) WRITER
Target Regulation Up regulation
Cell Process Epithelial-mesenchymal transition
In-vitro Model Huh-7 Adult hepatocellular carcinoma Homo sapiens CVCL_0336
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
DNA modification
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT02197
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Protein tyrosine phosphatase non-receptor type 13 (PTPN13)
Crosstalk relationship DNA modification → m6A
Disease Liver cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00492)
Leukocyte surface antigen CD47 (CD47)
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE012013 Click to Show/Hide the Full List
mod site chr3:108054210-108054211:- [2]
Sequence TTTGTTTTGTTTTTAGAGACAGGGTCTCATTATGTTGACCA
Transcript ID List ENST00000398258.7; ENST00000355354.13; ENST00000471694.1; ENST00000361309.5; ENST00000517766.5
External Link RMBase: RNA-editing_site_98588
5-methylcytidine (m5C)
In total 3 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003131 Click to Show/Hide the Full List
mod site chr3:108052293-108052294:-
Sequence AGGAGGGAGGATGGAGCACCCATGGTGGGGGTATGTTGGTG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000398258.7; ENST00000517766.5; ENST00000355354.13; ENST00000471694.1; ENST00000361309.5
External Link RMBase: m5C_site_32687
mod ID: M5CSITE003132 Click to Show/Hide the Full List
mod site chr3:108058387-108058388:-
Sequence TCATTGCCATATTGGTTATTCAGGTGATAGCCTATATCCTC
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000361309.5; ENST00000517766.5; ENST00000355354.13
External Link RMBase: m5C_site_32688
mod ID: M5CSITE003133 Click to Show/Hide the Full List
mod site chr3:108058413-108058414:-
Sequence TCCAGCGATTGGATTAACCTCCTTCGTCATTGCCATATTGG
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000355354.13; ENST00000517766.5; ENST00000361309.5
External Link RMBase: m5C_site_32689
N6-methyladenosine (m6A)
In total 81 m6A sequence/site(s) in this target gene
mod ID: M6ASITE061968 Click to Show/Hide the Full List
mod site chr3:108043487-108043488:- [3]
Sequence TTTTTTGCAGTGATTTGAAGACCAAAGTTGTTTTACAGCTG
Motif Score 2.876744048
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602034
mod ID: M6ASITE061969 Click to Show/Hide the Full List
mod site chr3:108043589-108043590:- [4]
Sequence AACCATTCTAAATAAAGAGAACTCCAGTGTTGCTATGTGCA
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602035
mod ID: M6ASITE061970 Click to Show/Hide the Full List
mod site chr3:108043659-108043660:- [3]
Sequence TATTAAATGGAGCATTATTTACAAAAAGCCATTGTTGAGAA
Motif Score 2.07285119
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602036
mod ID: M6ASITE061971 Click to Show/Hide the Full List
mod site chr3:108043691-108043692:- [4]
Sequence ATGACTGGTGAGAGAAGAAAACATTTTGTTTTTATTAAATG
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602037
mod ID: M6ASITE061972 Click to Show/Hide the Full List
mod site chr3:108043743-108043744:- [4]
Sequence GTACTAAGCTCCTCTGTAAGACAACATCTTAAATCTTAAAA
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602038
mod ID: M6ASITE061973 Click to Show/Hide the Full List
mod site chr3:108043761-108043762:- [3]
Sequence GAAAAAAAGAAAGCATTTGTACTAAGCTCCTCTGTAAGACA
Motif Score 3.278136905
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602039
mod ID: M6ASITE061975 Click to Show/Hide the Full List
mod site chr3:108043989-108043990:- [4]
Sequence GTTGAGGGATTTTTTTATAAACAGTTTTACTTGTGTCATAT
Motif Score 2.20572619
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602040
mod ID: M6ASITE061976 Click to Show/Hide the Full List
mod site chr3:108044061-108044062:- [4]
Sequence TAATTTACCTGTTGTTGGAAACTGGAGAAATGATTGTCGGG
Motif Score 2.627720238
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602041
mod ID: M6ASITE061977 Click to Show/Hide the Full List
mod site chr3:108044093-108044094:- [4]
Sequence TCTGTGGTGTATGTATGGAAACACATACTCCTTAATTTACC
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602042
mod ID: M6ASITE061978 Click to Show/Hide the Full List
mod site chr3:108044211-108044212:- [4]
Sequence TTGCACTAACAAAGCTCAAAACACGATAAGTTTACTCCTCC
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602043
mod ID: M6ASITE061979 Click to Show/Hide the Full List
mod site chr3:108044223-108044224:- [5]
Sequence CCAAATTGTTATTTGCACTAACAAAGCTCAAAACACGATAA
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602044
mod ID: M6ASITE061980 Click to Show/Hide the Full List
mod site chr3:108044227-108044228:- [3]
Sequence ACCACCAAATTGTTATTTGCACTAACAAAGCTCAAAACACG
Motif Score 3.252583333
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602045
mod ID: M6ASITE061981 Click to Show/Hide the Full List
mod site chr3:108044247-108044248:- [3]
Sequence TATAGTCAATTTAGTAAGTGACCACCAAATTGTTATTTGCA
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602046
mod ID: M6ASITE061982 Click to Show/Hide the Full List
mod site chr3:108044404-108044405:- [5]
Sequence TTTTTTTTTTGACTAATTTCACATGCTCTAAAAACCTTCAA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602047
mod ID: M6ASITE061983 Click to Show/Hide the Full List
mod site chr3:108044559-108044560:- [5]
Sequence CTTCCTGCAGTGTTTTGCATACATCAGAAGCTAGGTACATA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602048
mod ID: M6ASITE061984 Click to Show/Hide the Full List
mod site chr3:108044753-108044754:- [4]
Sequence TATTTGTCTTCTCCTTCAAAACATTCTCCTTTGCAGTTCCT
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602049
mod ID: M6ASITE061986 Click to Show/Hide the Full List
mod site chr3:108044803-108044804:- [5]
Sequence ACCATTTGTCCTTTTCTGCAACAACCTTTCCAGCTACTTTT
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602050
mod ID: M6ASITE061987 Click to Show/Hide the Full List
mod site chr3:108044930-108044931:- [6]
Sequence AATTGCAGACAGTGTTTTGCACATCATGTATCTGTTTTGTC
Motif Score 2.830589286
Cell/Tissue List brain; hESC-HEK293T
Seq Type List m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602051
mod ID: M6ASITE061988 Click to Show/Hide the Full List
mod site chr3:108044962-108044963:- [5]
Sequence AATGGCTCCCAAATTCCATCACATCACATTTAAATTGCAGA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602052
mod ID: M6ASITE061989 Click to Show/Hide the Full List
mod site chr3:108045048-108045049:- [6]
Sequence GCTTCTCTGGATAAGTGACCACAGAAGCAGGAGTCCTCCTG
Motif Score 2.053113095
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602053
mod ID: M6ASITE061990 Click to Show/Hide the Full List
mod site chr3:108045657-108045658:- [4]
Sequence TTGTCATATTTCATGTTGGGACCAAGTAGTTTGCCCATGGC
Motif Score 3.622404762
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602054
mod ID: M6ASITE061991 Click to Show/Hide the Full List
mod site chr3:108045916-108045917:- [4]
Sequence ATTTTGTGCTTTTAGTAAAAACATTTAAATACAAAGTTCTT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602055
mod ID: M6ASITE061992 Click to Show/Hide the Full List
mod site chr3:108045990-108045991:- [5]
Sequence TGCATACGTATGAGATAGGCACATGCATCTTCTGTATGGAC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602056
mod ID: M6ASITE061993 Click to Show/Hide the Full List
mod site chr3:108046057-108046058:- [4]
Sequence ATCGCCTGGAGTACTTTTAGACTTTTAGCATTCGTTTTTTA
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602057
mod ID: M6ASITE061994 Click to Show/Hide the Full List
mod site chr3:108046128-108046129:- [4]
Sequence ATGATTGAAAAGTAAACAAAACCCACATTTCCTATCCTGGT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602058
mod ID: M6ASITE061995 Click to Show/Hide the Full List
mod site chr3:108046133-108046134:- [4]
Sequence CCCCTATGATTGAAAAGTAAACAAAACCCACATTTCCTATC
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602059
mod ID: M6ASITE061997 Click to Show/Hide the Full List
mod site chr3:108046197-108046198:- [5]
Sequence GTATCTATGTTGCATGATAAACATTCATCACCTTCCTCCTG
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602060
mod ID: M6ASITE061998 Click to Show/Hide the Full List
mod site chr3:108046278-108046279:- [5]
Sequence TATGAGTCTCCTGCATGGCAACAAAATGTGTGTCACCATCA
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602061
mod ID: M6ASITE061999 Click to Show/Hide the Full List
mod site chr3:108046300-108046301:- [3]
Sequence AAAGCAAGATTGAAATTTGAACTATGAGTCTCCTGCATGGC
Motif Score 3.373380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602062
mod ID: M6ASITE062000 Click to Show/Hide the Full List
mod site chr3:108046545-108046546:- [3]
Sequence CCCTGTCTTGTCCTCCTGTTACTTGCTTCTGCTGTACAAGA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602063
mod ID: M6ASITE062001 Click to Show/Hide the Full List
mod site chr3:108046566-108046567:- [4]
Sequence TATTCACATAACCCCTTGAAACCCTGTCTTGTCCTCCTGTT
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602064
mod ID: M6ASITE062002 Click to Show/Hide the Full List
mod site chr3:108046646-108046647:- [4]
Sequence CCACATTCCCCCTTCAACAAACAGTGTAACAGGTCCTTCCC
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602065
mod ID: M6ASITE062003 Click to Show/Hide the Full List
mod site chr3:108047007-108047008:- [5]
Sequence TAGGGGCAATAGTAGAATGGACAATTTCCAAGAATGATGCC
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602066
mod ID: M6ASITE062004 Click to Show/Hide the Full List
mod site chr3:108047144-108047145:- [3]
Sequence TTGTCACCTATGAGACCCTTACGTGATTGTTAGTTAAGTTT
Motif Score 2.046785714
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000517766.5; ENST00000398258.7; ENST00000355354.13; ENST00000361309.5
External Link RMBase: m6A_site_602067
mod ID: M6ASITE062005 Click to Show/Hide the Full List
mod site chr3:108047150-108047151:- [4]
Sequence AACTGGTTGTCACCTATGAGACCCTTACGTGATTGTTAGTT
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000361309.5; ENST00000471694.1; ENST00000517766.5; ENST00000355354.13; ENST00000398258.7
External Link RMBase: m6A_site_602068
mod ID: M6ASITE062006 Click to Show/Hide the Full List
mod site chr3:108047159-108047160:- [3]
Sequence AAGAAAAGTAACTGGTTGTCACCTATGAGACCCTTACGTGA
Motif Score 2.026654762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000398258.7; ENST00000471694.1; ENST00000355354.13; ENST00000517766.5; ENST00000361309.5
External Link RMBase: m6A_site_602069
mod ID: M6ASITE062008 Click to Show/Hide the Full List
mod site chr3:108047169-108047170:- [3]
Sequence GAGAAGAAACAAGAAAAGTAACTGGTTGTCACCTATGAGAC
Motif Score 2.590089286
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000361309.5; ENST00000517766.5; ENST00000355354.13; ENST00000398258.7
External Link RMBase: m6A_site_602070
mod ID: M6ASITE062009 Click to Show/Hide the Full List
mod site chr3:108047181-108047182:- [4]
Sequence TTCACTGTTGGGGAGAAGAAACAAGAAAAGTAACTGGTTGT
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T; hNPCs
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000361309.5; ENST00000355354.13; ENST00000517766.5; ENST00000398258.7; ENST00000471694.1
External Link RMBase: m6A_site_602071
mod ID: M6ASITE062010 Click to Show/Hide the Full List
mod site chr3:108047231-108047232:- [3]
Sequence GTAAGACGTGAAAGGAATACACTTGTGTTTAAGCACCATGG
Motif Score 2.506922619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000471694.1; ENST00000355354.13; ENST00000361309.5; ENST00000398258.7; ENST00000517766.5
External Link RMBase: m6A_site_602072
mod ID: M6ASITE062011 Click to Show/Hide the Full List
mod site chr3:108047233-108047234:- [3]
Sequence TAGTAAGACGTGAAAGGAATACACTTGTGTTTAAGCACCAT
Motif Score 2.110482143
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000398258.7; ENST00000355354.13; ENST00000361309.5; ENST00000471694.1; ENST00000517766.5
External Link RMBase: m6A_site_602073
mod ID: M6ASITE062012 Click to Show/Hide the Full List
mod site chr3:108047246-108047247:- [3]
Sequence CCGATTTGGAGAGTAGTAAGACGTGAAAGGAATACACTTGT
Motif Score 2.871321429
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000398258.7; ENST00000517766.5; ENST00000361309.5; ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602074
mod ID: M6ASITE062013 Click to Show/Hide the Full List
mod site chr3:108047269-108047270:- [4]
Sequence TAACTGAAGTGAAGTGATGGACTCCGATTTGGAGAGTAGTA
Motif Score 4.065041667
Cell/Tissue List HeLa; hNPCs
Seq Type List m6A-seq
Transcript ID List ENST00000398258.7; ENST00000471694.1; ENST00000517766.5; ENST00000355354.13; ENST00000361309.5
External Link RMBase: m6A_site_602075
mod ID: M6ASITE062014 Click to Show/Hide the Full List
mod site chr3:108050587-108050588:- [4]
Sequence TTTCAGAAAGCTGTAGAGGAACCCCTTAATGGTATGTGGTT
Motif Score 2.930744048
Cell/Tissue List HeLa; hNPCs
Seq Type List m6A-seq
Transcript ID List ENST00000471694.1; ENST00000398258.7; ENST00000355354.13; ENST00000517766.5; ENST00000361309.5
External Link RMBase: m6A_site_602076
mod ID: M6ASITE062015 Click to Show/Hide the Full List
mod site chr3:108051950-108051951:- [5]
Sequence GCTTCCAATCAGAAGACTATACAACCTCCTAGGGTAAGTTA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000398258.7; ENST00000471694.1; ENST00000517766.5; ENST00000361309.5
External Link RMBase: m6A_site_602077
mod ID: M6ASITE062016 Click to Show/Hide the Full List
mod site chr3:108051955-108051956:- [4]
Sequence TATCAGCTTCCAATCAGAAGACTATACAACCTCCTAGGGTA
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000398258.7; ENST00000471694.1; ENST00000517766.5; ENST00000355354.13; ENST00000361309.5
External Link RMBase: m6A_site_602078
mod ID: M6ASITE062017 Click to Show/Hide the Full List
mod site chr3:108052035-108052036:- [4]
Sequence ACATTTTATCTTAAAATTAAACATTACCAAATGCCTTAGTT
Motif Score 2.20572619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000398258.7; ENST00000361309.5; ENST00000471694.1; ENST00000517766.5; ENST00000355354.13
External Link RMBase: m6A_site_602079
mod ID: M6ASITE062019 Click to Show/Hide the Full List
mod site chr3:108052353-108052354:- [4]
Sequence AGGGAGATGGAGTAGTGGGGACAAATTCTGGCACATTCTGT
Motif Score 3.643047619
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000361309.5; ENST00000398258.7; ENST00000517766.5; ENST00000355354.13; ENST00000471694.1
External Link RMBase: m6A_site_602080
mod ID: M6ASITE062020 Click to Show/Hide the Full List
mod site chr3:108052392-108052393:- [4]
Sequence AAAGAGACTGAGCTTGTAAGACACAGGAGCAGTGAGCTAAG
Motif Score 2.897386905
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000361309.5; ENST00000398258.7; ENST00000471694.1; ENST00000517766.5; ENST00000355354.13
External Link RMBase: m6A_site_602081
mod ID: M6ASITE062021 Click to Show/Hide the Full List
mod site chr3:108052406-108052407:- [7]
Sequence GGAGTGATGTGGAGAAAGAGACTGAGCTTGTAAGACACAGG
Motif Score 3.319380952
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000471694.1; ENST00000361309.5; ENST00000355354.13; ENST00000398258.7; ENST00000517766.5
External Link RMBase: m6A_site_602082
mod ID: M6ASITE062022 Click to Show/Hide the Full List
mod site chr3:108052432-108052433:- [7]
Sequence GGAGCTTTGAAACTGGAAAGACCCAGGGAGTGATGTGGAGA
Motif Score 2.876744048
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000398258.7; ENST00000517766.5; ENST00000471694.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602083
mod ID: M6ASITE062023 Click to Show/Hide the Full List
mod site chr3:108052441-108052442:- [7]
Sequence TAGCTCTTTGGAGCTTTGAAACTGGAAAGACCCAGGGAGTG
Motif Score 2.627720238
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000398258.7; ENST00000471694.1; ENST00000361309.5; ENST00000517766.5; ENST00000355354.13
External Link RMBase: m6A_site_602084
mod ID: M6ASITE062024 Click to Show/Hide the Full List
mod site chr3:108053174-108053175:- [7]
Sequence TGGTAAATAAATAGTAAGGAACACAGAGCAGTCCTGGAGGC
Motif Score 2.951386905
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000398258.7; ENST00000355354.13; ENST00000361309.5; ENST00000517766.5; ENST00000471694.1
External Link RMBase: m6A_site_602085
mod ID: M6ASITE062025 Click to Show/Hide the Full List
mod site chr3:108053250-108053251:- [7]
Sequence TTGGCTTTCCTTGGGTCAGGACCCACCCTTTTCCCTGCCAG
Motif Score 3.622404762
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000471694.1; ENST00000361309.5; ENST00000517766.5; ENST00000355354.13; ENST00000398258.7
External Link RMBase: m6A_site_602086
mod ID: M6ASITE062026 Click to Show/Hide the Full List
mod site chr3:108053443-108053444:- [4]
Sequence TTTCTTACCTACAGCTTTGGACTCATCCTTGTCTCCTTTCT
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000398258.7; ENST00000517766.5; ENST00000361309.5; ENST00000471694.1; ENST00000355354.13
External Link RMBase: m6A_site_602087
mod ID: M6ASITE062027 Click to Show/Hide the Full List
mod site chr3:108053469-108053470:- [4]
Sequence CTATTCATGCCTTCTCACAGACAACTTTTCTTACCTACAGC
Motif Score 2.897386905
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000398258.7; ENST00000517766.5; ENST00000471694.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602088
mod ID: M6ASITE062028 Click to Show/Hide the Full List
mod site chr3:108057504-108057505:- [3]
Sequence ATCTTAGCTCTAGCACAATTACTTGGACTAGTTTATATGAA
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355354.13; ENST00000361309.5; ENST00000517766.5; ENST00000398258.7
External Link RMBase: m6A_site_602089
mod ID: M6ASITE062030 Click to Show/Hide the Full List
mod site chr3:108057510-108057511:- [5]
Sequence TTGAGTATCTTAGCTCTAGCACAATTACTTGGACTAGTTTA
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000517766.5; ENST00000361309.5; ENST00000355354.13; ENST00000398258.7
External Link RMBase: m6A_site_602090
mod ID: M6ASITE062031 Click to Show/Hide the Full List
mod site chr3:108058355-108058356:- [4]
Sequence TATATCCTCGCTGTGGTTGGACTGAGTCTCTGTATTGCGGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T
Seq Type List m6A-seq; DART-seq
Transcript ID List ENST00000398258.7; ENST00000361309.5; ENST00000355354.13; ENST00000517766.5
External Link RMBase: m6A_site_602091
mod ID: M6ASITE062032 Click to Show/Hide the Full List
mod site chr3:108059471-108059472:- [3]
Sequence AGGGATATTAATATTACTTCACTACTATGTGTTTAGTACAG
Motif Score 2.469291667
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355354.13; ENST00000517766.5; ENST00000644850.1; ENST00000361309.5
External Link RMBase: m6A_site_602092
mod ID: M6ASITE062033 Click to Show/Hide the Full List
mod site chr3:108059493-108059494:- [6]
Sequence TTGGTTTAATTGTGACTTCTACAGGGATATTAATATTACTT
Motif Score 2.078666667
Cell/Tissue List HEK293
Seq Type List m6A-REF-seq
Transcript ID List ENST00000517766.5; ENST00000355354.13; ENST00000361309.5; ENST00000644850.1
External Link RMBase: m6A_site_602093
mod ID: M6ASITE062034 Click to Show/Hide the Full List
mod site chr3:108059499-108059500:- [3]
Sequence CTGGCCTTGGTTTAATTGTGACTTCTACAGGGATATTAATA
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000361309.5; ENST00000644850.1; ENST00000517766.5; ENST00000355354.13
External Link RMBase: m6A_site_602094
mod ID: M6ASITE062035 Click to Show/Hide the Full List
mod site chr3:108060793-108060794:- [4]
Sequence ATTGCTTTACTTGTTGCTGGACTAGTGATCACTGTCATTGT
Motif Score 4.065041667
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602095
mod ID: M6ASITE062036 Click to Show/Hide the Full List
mod site chr3:108060805-108060806:- [3]
Sequence GATGAGAAAACAATTGCTTTACTTGTTGCTGGACTAGTGAT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602096
mod ID: M6ASITE062037 Click to Show/Hide the Full List
mod site chr3:108060816-108060817:- [4]
Sequence CCGGTGGTATGGATGAGAAAACAATTGCTTTACTTGTTGCT
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602097
mod ID: M6ASITE062038 Click to Show/Hide the Full List
mod site chr3:108071108-108071109:- [4]
Sequence GCTATACTCCTGTTCTGGGGACAGTTTGGTATTAAAAGTAA
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000361309.5; ENST00000644850.1; ENST00000355354.13
External Link RMBase: m6A_site_602098
mod ID: M6ASITE062039 Click to Show/Hide the Full List
mod site chr3:108080058-108080059:- [4]
Sequence TGCTGTCTCACACACAGGAAACTACACTTGTGAAGTAACAG
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000355354.13; ENST00000644850.1; ENST00000361309.5
External Link RMBase: m6A_site_602099
mod ID: M6ASITE062041 Click to Show/Hide the Full List
mod site chr3:108080065-108080066:- [3]
Sequence AGAGTGATGCTGTCTCACACACAGGAAACTACACTTGTGAA
Motif Score 2.084928571
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602100
mod ID: M6ASITE062042 Click to Show/Hide the Full List
mod site chr3:108080069-108080070:- [5]
Sequence GATAAGAGTGATGCTGTCTCACACACAGGAAACTACACTTG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602101
mod ID: M6ASITE062043 Click to Show/Hide the Full List
mod site chr3:108080117-108080118:- [3]
Sequence AAAATTGAAGTCTCACAATTACTAAAAGGAGATGCCTCTTT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355354.13; ENST00000644850.1; ENST00000361309.5
External Link RMBase: m6A_site_602102
mod ID: M6ASITE062044 Click to Show/Hide the Full List
mod site chr3:108080123-108080124:- [5]
Sequence AGTGCAAAAATTGAAGTCTCACAATTACTAAAAGGAGATGC
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602103
mod ID: M6ASITE062045 Click to Show/Hide the Full List
mod site chr3:108080151-108080152:- [8]
Sequence CAAGTCCACTGTCCCCACTGACTTTAGTAGTGCAAAAATTG
Motif Score 3.28175
Cell/Tissue List CD8T; A549; AML
Seq Type List m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000361309.5; ENST00000644850.1; ENST00000355354.13
External Link RMBase: m6A_site_602104
mod ID: M6ASITE062046 Click to Show/Hide the Full List
mod site chr3:108080172-108080173:- [4]
Sequence CACCTTTGATGGAGCTCTAAACAAGTCCACTGTCCCCACTG
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T; hNPCs
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000361309.5; ENST00000644850.1; ENST00000355354.13
External Link RMBase: m6A_site_602105
mod ID: M6ASITE062047 Click to Show/Hide the Full List
mod site chr3:108080193-108080194:- [3]
Sequence ATTTAAAGGAAGAGATATTTACACCTTTGATGGAGCTCTAA
Motif Score 2.07285119
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000361309.5; ENST00000355354.13; ENST00000644850.1
External Link RMBase: m6A_site_602106
mod ID: M6ASITE062048 Click to Show/Hide the Full List
mod site chr3:108080241-108080242:- [4]
Sequence TACTAATATGGAGGCACAAAACACTACTGAAGTATACGTAA
Motif Score 2.20572619
Cell/Tissue List HeLa; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000644850.1; ENST00000355354.13; ENST00000361309.5
External Link RMBase: m6A_site_602107
mod ID: M6ASITE062049 Click to Show/Hide the Full List
mod site chr3:108080246-108080247:- [5]
Sequence TTTGTTACTAATATGGAGGCACAAAACACTACTGAAGTATA
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000355354.13; ENST00000361309.5; ENST00000644850.1
External Link RMBase: m6A_site_602108
mod ID: M6ASITE062050 Click to Show/Hide the Full List
mod site chr3:108080260-108080261:- [3]
Sequence TCGTCATTCCATGCTTTGTTACTAATATGGAGGCACAAAAC
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000355354.13; ENST00000644850.1; ENST00000361309.5
External Link RMBase: m6A_site_602109
mod ID: M6ASITE062052 Click to Show/Hide the Full List
mod site chr3:108080286-108080287:- [5]
Sequence AGAATTCACGTTTTGTAATGACACTGTCGTCATTCCATGCT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000361309.5; ENST00000644850.1; ENST00000355354.13
External Link RMBase: m6A_site_602110
mod ID: M6ASITE062053 Click to Show/Hide the Full List
mod site chr3:108080317-108080318:- [5]
Sequence CTCAGCTACTATTTAATAAAACAAAATCTGTAGAATTCACG
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000644850.1; ENST00000361309.5; ENST00000355354.13
External Link RMBase: m6A_site_602111
mod ID: M6ASITE062054 Click to Show/Hide the Full List
mod site chr3:108090948-108090949:- [9]
Sequence GGCGGCGGCTGCTGCTCCGGACACCTGCGGCGGCGGCGGCG
Motif Score 3.643047619
Cell/Tissue List A549; hESC-HEK293T; GSC-11; HEK293A-TOA; iSLK; TIME
Seq Type List MeRIP-seq; MAZTER-seq; m6A-seq
Transcript ID List ENST00000361309.5; ENST00000644850.1; ENST00000355354.13
External Link RMBase: m6A_site_602112
mod ID: M6ASITE062055 Click to Show/Hide the Full List
mod site chr3:108091740-108091741:- [10]
Sequence GAGGATGAAAACACTAAAGAACCAAGTGAGAAAGAGGGAAG
Motif Score 2.930744048
Cell/Tissue List HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000644850.1
External Link RMBase: m6A_site_602113
mod ID: M6ASITE062056 Click to Show/Hide the Full List
mod site chr3:108091750-108091751:- [10]
Sequence ACCCTGATCAGAGGATGAAAACACTAAAGAACCAAGTGAGA
Motif Score 2.20572619
Cell/Tissue List HEK293A-TOA
Seq Type List m6A-seq
Transcript ID List ENST00000644850.1
External Link RMBase: m6A_site_602114
Pseudouridine (Pseudo)
In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000188 Click to Show/Hide the Full List
mod site chr3:108080194-108080195:- [11]
Sequence AATTTAAAGGAAGAGATATTTACACCTTTGATGGAGCTCTA
Transcript ID List ENST00000361309.5; ENST00000355354.13; ENST00000644850.1
External Link RMBase: Pseudo_site_3570