m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00216)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
CIDEC
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Fat mass and obesity-associated protein (FTO) [ERASER]
| Representative RNA-seq result indicating the expression of this target gene regulated by FTO | ||
| Cell Line | Mouse liver | Mus musculus |
|
Treatment: FTO knockout mouse liver tissue
Control: Wild type mouse liver tissue
|
GSE125785 | |
| Regulation |
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logFC: -2.15E+00 p-value: 6.18E-03 |
| More Results | Click to View More RNA-seq Results | |
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | FTO increased the lipid accumulation in hepatocytes by increasing nuclear translocation of SREBP1c and SREBP1c maturation, thus improving the transcriptional activity of LD-associated protein Cell death activator CIDE-3 (CIDEC).The studies provide new mechanistic insight into nonalcoholic fatty liver disease (NAFLD) mediated by FTO. | |||
| Target Regulation | Up regulation | |||
| Responsed Disease | Non-alcoholic fatty liver disease | ICD-11: DB92 | ||
| Cell Process | Lipogenesis | |||
| In-vitro Model | HEK293T | Normal | Homo sapiens | CVCL_0063 |
| Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
| In-vivo Model | After being fed with high-fat diet for 4 weeks, mice were given twice vena caudalis injection of control siRNA or Cidec siRNA (50 ug/mouse) mixed with liposome. Liposomes were prepared as described elsewhere. | |||
Non-alcoholic fatty liver disease [ICD-11: DB92]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | FTO increased the lipid accumulation in hepatocytes by increasing nuclear translocation of SREBP1c and SREBP1c maturation, thus improving the transcriptional activity of LD-associated protein Cell death activator CIDE-3 (CIDEC).The studies provide new mechanistic insight into nonalcoholic fatty liver disease (NAFLD) mediated by FTO. | |||
| Responsed Disease | Non-alcoholic fatty liver disease [ICD-11: DB92] | |||
| Target Regulator | Fat mass and obesity-associated protein (FTO) | ERASER | ||
| Target Regulation | Up regulation | |||
| Cell Process | Lipogenesis | |||
| In-vitro Model | HEK293T | Normal | Homo sapiens | CVCL_0063 |
| Hep-G2 | Hepatoblastoma | Homo sapiens | CVCL_0027 | |
| In-vivo Model | After being fed with high-fat diet for 4 weeks, mice were given twice vena caudalis injection of control siRNA or Cidec siRNA (50 ug/mouse) mixed with liposome. Liposomes were prepared as described elsewhere. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Thiol S-methyltransferase TMT1A (METTL7A)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05128 | ||
| Epigenetic Regulator | hsa-miR-204 | |
| Regulated Target | Thiol methyltransferase 1A (TMT1A) | |
| Crosstalk relationship | ncRNA → m6A | |
| Disease | Diabetic nephropathy | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00216)
| In total 9 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE059320 | Click to Show/Hide the Full List | ||
| mod site | chr3:9866952-9866953:- | [3] | |
| Sequence | GGTGGGTTGGCCAAAGGAGAACCTCAAGCTCCTGGCCTGAT | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000423850.5; ENST00000455015.5; ENST00000336832.6; ENST00000383817.5; ENST00000618572.4 | ||
| External Link | RMBase: m6A_site_576222 | ||
| mod ID: M6ASITE059321 | Click to Show/Hide the Full List | ||
| mod site | chr3:9866978-9866979:- | [3] | |
| Sequence | GTGAGGAGGAGGAGCTGGAAACCTGGGGTGGGTTGGCCAAA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000423850.5; ENST00000383817.5; ENST00000618572.4; ENST00000336832.6; ENST00000455015.5 | ||
| External Link | RMBase: m6A_site_576223 | ||
| mod ID: M6ASITE059322 | Click to Show/Hide the Full List | ||
| mod site | chr3:9867005-9867006:- | [3] | |
| Sequence | CACCTCCCTCACCGCGCAGGACCCTGAGTGAGGAGGAGGAG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000423850.5; ENST00000455015.5; ENST00000336832.6; ENST00000618572.4; ENST00000383817.5 | ||
| External Link | RMBase: m6A_site_576224 | ||
| mod ID: M6ASITE059323 | Click to Show/Hide the Full List | ||
| mod site | chr3:9867034-9867035:- | [3] | |
| Sequence | TGGCAGCTGTAGAGCCGCGAACCTCCCCACACCTCCCTCAC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000430427.5; ENST00000618572.4; ENST00000455015.5; ENST00000383817.5; ENST00000336832.6; ENST00000423850.5 | ||
| External Link | RMBase: m6A_site_576225 | ||
| mod ID: M6ASITE059324 | Click to Show/Hide the Full List | ||
| mod site | chr3:9867097-9867098:- | [4] | |
| Sequence | GAAGCTTTCCCCAGTGAAGGACTGACTGGGGGCCTCACGCT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | MSC | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000383817.5; ENST00000423850.5; ENST00000455015.5; ENST00000430427.5; ENST00000443115.1; ENST00000336832.6; ENST00000618572.4 | ||
| External Link | RMBase: m6A_site_576226 | ||
| mod ID: M6ASITE059325 | Click to Show/Hide the Full List | ||
| mod site | chr3:9877907-9877908:- | [5] | |
| Sequence | GTGAGGAGAGTGAGGCCAAGACAGGTGGTAAATGGGGAATG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HepG2 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000455015.5; ENST00000430427.5; ENST00000383817.5; ENST00000443115.1; ENST00000618572.4; ENST00000336832.6; ENST00000423850.5; ENST00000487454.1 | ||
| External Link | RMBase: m6A_site_576227 | ||
| mod ID: M6ASITE059326 | Click to Show/Hide the Full List | ||
| mod site | chr3:9878784-9878785:- | [6] | |
| Sequence | CCAGAGCCAGGGGATGAGAAACATGGAGTGAGTGGGACTGG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | HepG2; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000618572.4; ENST00000336832.6; ENST00000455015.5; ENST00000423850.5; ENST00000487454.1; ENST00000383817.5 | ||
| External Link | RMBase: m6A_site_576228 | ||
| mod ID: M6ASITE059327 | Click to Show/Hide the Full List | ||
| mod site | chr3:9878947-9878948:- | [4] | |
| Sequence | CCTGCCTGTGAGGTCTCTGGACTAGAGGTGAGGGAACGGTC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | MSC | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000423850.5; ENST00000487454.1; ENST00000618572.4; ENST00000336832.6; ENST00000455015.5 | ||
| External Link | RMBase: m6A_site_576229 | ||
| mod ID: M6ASITE059329 | Click to Show/Hide the Full List | ||
| mod site | chr3:9879000-9879001:- | [4] | |
| Sequence | GGGGCTCGGATTGCTCAAGGACCCATGGGAGAGAGGAGGCT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | MSC | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000423850.5; ENST00000336832.6; ENST00000487454.1; ENST00000618572.4; ENST00000455015.5 | ||
| External Link | RMBase: m6A_site_576230 | ||
References

