General Information of the m6A Target Gene (ID: M6ATAR00122)
Target Name DLGAP1 antisense RNA 1 (DLGAP1-AS1)
Synonyms
DLGAP1-AS1; DLGAP1 antisense RNA 1 (non-protein coding); HsT914; FLJ35776
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Gene Name DLGAP1-AS1
Chromosomal Location 18p11.31
Family Antisense RNAs
Gene ID 649446
HGNC ID
HGNC:31676
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
DLGAP1-AS1 can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Wilms tumor 1-associating protein (WTAP) [WRITER]
In total 1 item(s) under this regulator
Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene [1]
Response Summary LncRNA DLGAP1-AS1 promotes BC ADR-resistance through WTAP/DLGAP1 antisense RNA 1 (DLGAP1-AS1)/miR-299-3p feedback loop in breast cancer.
Target Regulation Up regulation
Responsed Disease Breast cancer ICD-11: 2C60
Responsed Drug Doxil Approved
Cell Process Cell proliferation
In-vitro Model ADR-resistant MCF-7 (MCF-7/ADR) cells (Human breast cancer doxorubicin-resistant cell line)
BT-549 Invasive breast carcinoma Homo sapiens CVCL_1092
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-10A Normal Homo sapiens CVCL_0598
Breast cancer [ICD-11: 2C60]
In total 1 item(s) under this disease
Experiment 1 Reporting the m6A-centered Disease Response [1]
Response Summary LncRNA DLGAP1-AS1 promotes BC ADR-resistance through WTAP/DLGAP1 antisense RNA 1 (DLGAP1-AS1)/miR-299-3p feedback loop in breast cancer.
Responsed Disease Breast cancer [ICD-11: 2C60]
Target Regulator Wilms tumor 1-associating protein (WTAP) WRITER
Target Regulation Up regulation
Responsed Drug Doxil Approved
Cell Process Cell proliferation
In-vitro Model ADR-resistant MCF-7 (MCF-7/ADR) cells (Human breast cancer doxorubicin-resistant cell line)
BT-549 Invasive breast carcinoma Homo sapiens CVCL_1092
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-10A Normal Homo sapiens CVCL_0598
Doxil [Approved]
In total 1 item(s) under this drug
Experiment 1 Reporting the m6A-centered Drug Response [1]
Response Summary LncRNA DLGAP1-AS1 promotes BC ADR-resistance through WTAP/DLGAP1 antisense RNA 1 (DLGAP1-AS1)/miR-299-3p feedback loop in breast cancer.
Target Regulator Wilms tumor 1-associating protein (WTAP) WRITER
Target Regulation Up regulation
Responsed Disease Breast cancer ICD-11: 2C60
Cell Process Cell proliferation
In-vitro Model ADR-resistant MCF-7 (MCF-7/ADR) cells (Human breast cancer doxorubicin-resistant cell line)
BT-549 Invasive breast carcinoma Homo sapiens CVCL_1092
MCF-7 Invasive breast carcinoma Homo sapiens CVCL_0031
MDA-MB-231 Breast adenocarcinoma Homo sapiens CVCL_0062
MCF-10A Normal Homo sapiens CVCL_0598
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Wilms tumor 1-associating protein (WTAP)
In total 4 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05284
Epigenetic Regulator DLGAP1 antisense RNA 1 (DLGAP1-AS1)
Regulated Target hsa-miR-299-3p
Crosstalk relationship m6A → ncRNA
Disease Breast cancer
Drug Adriamycin
Crosstalk ID: M6ACROT05285
Epigenetic Regulator hsa-miR-299-3p
Regulated Target Pre-mRNA-splicing regulator WTAP (WTAP)
Crosstalk relationship ncRNA → m6A
Disease Breast cancer
Drug Adriamycin
Crosstalk ID: M6ACROT05286
Epigenetic Regulator DLGAP1 antisense RNA 1 (DLGAP1-AS1)
Regulated Target hsa-miR-299-3p
Crosstalk relationship ncRNA → m6A
Disease Breast cancer
Drug Adriamycin
Crosstalk ID: M6ACROT05546
Epigenetic Regulator DLGAP1 antisense RNA 1 (DLGAP1-AS1)
Regulated Target hsa-miR-299-3p
Crosstalk relationship m6A → ncRNA
Disease Breast cancer
Drug ADR
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00122)
DLGAP1 antisense RNA 1 (DLGAP1-AS1)
Adenosine-to-Inosine editing (A-to-I)
In total 9 m6A sequence/site(s) in this target gene
mod ID: A2ISITE008596 Click to Show/Hide the Full List
mod site chr18:3597865-3597866:+ [2]
Sequence GGAGGCTGCAGGCCCCCCTGATCTGTGTAGTTAGGCACTTA
Transcript ID List ENST00000317114.1
External Link RMBase: RNA-editing_site_62263
mod ID: A2ISITE008597 Click to Show/Hide the Full List
mod site chr18:3598130-3598131:+ [2]
Sequence GAGGCTGAGGTGGGTGGATCACAAGGTCAAGAGATCAAGAC
Transcript ID List ENST00000317114.1; rmsk_4788090
External Link RMBase: RNA-editing_site_62264
mod ID: A2ISITE008598 Click to Show/Hide the Full List
mod site chr18:3598133-3598134:+ [2]
Sequence GCTGAGGTGGGTGGATCACAAGGTCAAGAGATCAAGACCAT
Transcript ID List rmsk_4788090; ENST00000317114.1
External Link RMBase: RNA-editing_site_62265
mod ID: A2ISITE008599 Click to Show/Hide the Full List
mod site chr18:3598139-3598140:+ [2]
Sequence GTGGGTGGATCACAAGGTCAAGAGATCAAGACCATCCTGGC
Transcript ID List rmsk_4788090; ENST00000317114.1
External Link RMBase: RNA-editing_site_62266
mod ID: A2ISITE008600 Click to Show/Hide the Full List
mod site chr18:3598185-3598186:+ [2]
Sequence AACATAGTGAACCTGTCTCTACTAAAAATACAAAAAGTAGC
Transcript ID List ENST00000317114.1; rmsk_4788090
External Link RMBase: RNA-editing_site_62267
mod ID: A2ISITE008601 Click to Show/Hide the Full List
mod site chr18:3598191-3598192:+ [2]
Sequence GTGAACCTGTCTCTACTAAAAATACAAAAAGTAGCTGGGCG
Transcript ID List rmsk_4788090; ENST00000317114.1
External Link RMBase: RNA-editing_site_62268
mod ID: A2ISITE008602 Click to Show/Hide the Full List
mod site chr18:3598229-3598230:+ [2]
Sequence GCGTAGTGGCGCATGCCTGTAGTCCCAGCTGCTCGGGAGGC
Transcript ID List ENST00000317114.1; rmsk_4788090
External Link RMBase: RNA-editing_site_62269
mod ID: A2ISITE008603 Click to Show/Hide the Full List
mod site chr18:3598269-3598270:+ [2]
Sequence CTGAGGCAGGAGAGTCGTTTAGGCCTGGCAGGCGGAGGTTG
Transcript ID List ENST00000317114.1; rmsk_4788090
External Link RMBase: RNA-editing_site_62270
mod ID: A2ISITE008604 Click to Show/Hide the Full List
mod site chr18:3598278-3598279:+ [2]
Sequence GAGAGTCGTTTAGGCCTGGCAGGCGGAGGTTGCAGTGAGCT
Transcript ID List ENST00000317114.1; rmsk_4788090
External Link RMBase: RNA-editing_site_62271
N6-methyladenosine (m6A)
In total 27 m6A sequence/site(s) in this target gene
mod ID: M6ASITE036628 Click to Show/Hide the Full List
mod site chr18:3594163-3594164:+ [3]
Sequence CCCAGTCAAAAGAGCTTGAAACCTACCAAGCCGGAGGACTG
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; A549; CD4T; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000577995.5; ENST00000575606.5; ENST00000576606.5; ENST00000574411.5; ENST00000317114.1
External Link RMBase: m6A_site_392773
mod ID: M6ASITE036629 Click to Show/Hide the Full List
mod site chr18:3594180-3594181:+ [3]
Sequence GAAACCTACCAAGCCGGAGGACTGTGCTGTGCCTCTCTCGC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; CD4T; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000577995.5; ENST00000576606.5; ENST00000574411.5; ENST00000575606.5; ENST00000317114.1
External Link RMBase: m6A_site_392774
mod ID: M6ASITE036630 Click to Show/Hide the Full List
mod site chr18:3594228-3594229:+ [3]
Sequence TTCCCCAAGCACTCTCAGGAACCTGGCAACAGGTAACGTGG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; U2OS; Huh7; CD4T; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000574411.5; ENST00000575606.5; ENST00000576606.5; ENST00000317114.1; ENST00000577995.5
External Link RMBase: m6A_site_392775
mod ID: M6ASITE036631 Click to Show/Hide the Full List
mod site chr18:3594443-3594444:+ [3]
Sequence CCCTTGTGGCCAAGCCTGGAACATCACATCTGTACGTTGCA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; A549; U2OS; CD4T; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000576606.5; ENST00000574411.5; ENST00000575606.5; ENST00000317114.1; ENST00000577995.5
External Link RMBase: m6A_site_392776
mod ID: M6ASITE036632 Click to Show/Hide the Full List
mod site chr18:3596713-3596714:+ [3]
Sequence CTTGTTACATGAAGGCGTGAACAGGGATGAGAAGAGACTTC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; CD8T; H1299; MM6; Huh7; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000317114.1; ENST00000576606.5; ENST00000577995.5; ENST00000574411.5; ENST00000575606.5; ENST00000573355.1
External Link RMBase: m6A_site_392777
mod ID: M6ASITE036633 Click to Show/Hide the Full List
mod site chr18:3596729-3596730:+ [3]
Sequence GTGAACAGGGATGAGAAGAGACTTCCTGGAGAAACAAAAGG
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; CD8T; H1299; MM6; Huh7; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000577995.5; ENST00000573355.1; ENST00000574411.5; ENST00000317114.1; ENST00000575606.5; ENST00000576606.5
External Link RMBase: m6A_site_392778
mod ID: M6ASITE036634 Click to Show/Hide the Full List
mod site chr18:3596742-3596743:+ [3]
Sequence AGAAGAGACTTCCTGGAGAAACAAAAGGACTAACAATCAGG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Huh7; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1; ENST00000574411.5; ENST00000573355.1; ENST00000575606.5; ENST00000577995.5; ENST00000576606.5
External Link RMBase: m6A_site_392779
mod ID: M6ASITE036635 Click to Show/Hide the Full List
mod site chr18:3596750-3596751:+ [3]
Sequence CTTCCTGGAGAAACAAAAGGACTAACAATCAGGAAGGGGAG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; CD8T; H1299; MM6; Huh7; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000576606.5; ENST00000577995.5; ENST00000317114.1; ENST00000574411.5; ENST00000575606.5; ENST00000573355.1
External Link RMBase: m6A_site_392780
mod ID: M6ASITE036636 Click to Show/Hide the Full List
mod site chr18:3596754-3596755:+ [4]
Sequence CTGGAGAAACAAAAGGACTAACAATCAGGAAGGGGAGGTGA
Motif Score 2.168095238
Cell/Tissue List CD8T
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000574411.5; ENST00000577995.5; ENST00000576606.5; ENST00000573355.1; ENST00000575606.5; ENST00000317114.1
External Link RMBase: m6A_site_392781
mod ID: M6ASITE036637 Click to Show/Hide the Full List
mod site chr18:3596795-3596796:+ [3]
Sequence TCGGGGCAGGAGTAAAGTGGACACCTCAGCAAAGCCATTCG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Huh7; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000574411.5; ENST00000575606.5; ENST00000576606.5; ENST00000573355.1; ENST00000577995.5; ENST00000317114.1
External Link RMBase: m6A_site_392782
mod ID: M6ASITE036638 Click to Show/Hide the Full List
mod site chr18:3597012-3597013:+ [3]
Sequence CCACAGGCTCTCGGCAAAGGACCGTGGGAGGCACCTGTGAC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; U2OS; Huh7; MSC; TIME; iSLK; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000573355.1; ENST00000317114.1; ENST00000576606.5; ENST00000575606.5; ENST00000574411.5
External Link RMBase: m6A_site_392783
mod ID: M6ASITE036639 Click to Show/Hide the Full List
mod site chr18:3597120-3597121:+ [5]
Sequence TCACTCTCAGCCCACACAAAACTAGGAACTTTGTTATTCTA
Motif Score 2.627720238
Cell/Tissue List HeLa; GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1; ENST00000573355.1; ENST00000576606.5; ENST00000575606.5; ENST00000574411.5
External Link RMBase: m6A_site_392784
mod ID: M6ASITE036640 Click to Show/Hide the Full List
mod site chr18:3597127-3597128:+ [5]
Sequence CAGCCCACACAAAACTAGGAACTTTGTTATTCTACTTATTT
Motif Score 3.373380952
Cell/Tissue List HeLa; GM12878; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000574411.5; ENST00000576606.5; ENST00000573355.1; ENST00000575606.5; ENST00000317114.1
External Link RMBase: m6A_site_392785
mod ID: M6ASITE036641 Click to Show/Hide the Full List
mod site chr18:3597197-3597198:+ [3]
Sequence GGATATCTGAGAGCCAGCGAACTTTCTTTACCTCCTAGTAT
Motif Score 3.373380952
Cell/Tissue List HeLa; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000573355.1; ENST00000317114.1; ENST00000576606.5; ENST00000575606.5; ENST00000574411.5
External Link RMBase: m6A_site_392786
mod ID: M6ASITE036642 Click to Show/Hide the Full List
mod site chr18:3597262-3597263:+ [3]
Sequence TGCACAATGGGGCCTTGGAGACAGGAATAAAAGGAAAAATC
Motif Score 2.897386905
Cell/Tissue List HeLa; A549; hNPCs; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000575606.5; ENST00000317114.1; ENST00000574411.5; ENST00000576606.5
External Link RMBase: m6A_site_392787
mod ID: M6ASITE036643 Click to Show/Hide the Full List
mod site chr18:3597318-3597319:+ [3]
Sequence TGACGCAACAGGCTATGAAGACTCCCTGCCCGGCTGCTATA
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; hNPCs; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000576606.5; ENST00000317114.1; ENST00000574411.5; ENST00000575606.5
External Link RMBase: m6A_site_392788
mod ID: M6ASITE036644 Click to Show/Hide the Full List
mod site chr18:3597349-3597350:+ [3]
Sequence GGCTGCTATATGTCTGGTAAACAGAATAAATAGTACTTGAG
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; A549; Huh7; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000575606.5; ENST00000574411.5; ENST00000317114.1; ENST00000576606.5
External Link RMBase: m6A_site_392789
mod ID: M6ASITE036645 Click to Show/Hide the Full List
mod site chr18:3597378-3597379:+ [4]
Sequence ATAGTACTTGAGCATCCCTGACTCTGAGACTGTGGGGTAGC
Motif Score 3.28175
Cell/Tissue List A549
Seq Type List m6A-CLIP/IP
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392790
mod ID: M6ASITE036646 Click to Show/Hide the Full List
mod site chr18:3597386-3597387:+ [3]
Sequence TGAGCATCCCTGACTCTGAGACTGTGGGGTAGCTGGTTGTT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; H1299; Huh7; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392791
mod ID: M6ASITE036647 Click to Show/Hide the Full List
mod site chr18:3597417-3597418:+ [3]
Sequence GCTGGTTGTTTTAAGATGGGACCAGGGTATTGTGCACTTAT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; H1299; Huh7; MSC; TIME; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392792
mod ID: M6ASITE036648 Click to Show/Hide the Full List
mod site chr18:3597496-3597497:+ [3]
Sequence AGTGAGTGGCCTGTGTATGAACCAGGGTCCGTCCCATCTAA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; A549; U2OS; MSC; TIME; iSLK; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392793
mod ID: M6ASITE036649 Click to Show/Hide the Full List
mod site chr18:3597549-3597550:+ [3]
Sequence CAGGCTGAGTCCTCACCAAGACTTCAGCGTGGATTCATCAG
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; A549; MSC; TIME; iSLK; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392794
mod ID: M6ASITE036650 Click to Show/Hide the Full List
mod site chr18:3597599-3597600:+ [3]
Sequence TTCACTGGCAGGCTTGCTGGACTTTGGAGAAAAGGCTGACC
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; A549; CD4T; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392795
mod ID: M6ASITE036651 Click to Show/Hide the Full List
mod site chr18:3597658-3597659:+ [3]
Sequence TTGCTGCCACTGCCCTAGGAACAGAGGGCCTGGAGCCAGGG
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; A549; U2OS; H1A; H1B; CD4T; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392796
mod ID: M6ASITE036652 Click to Show/Hide the Full List
mod site chr18:3597719-3597720:+ [3]
Sequence TTTGCACAAGGCCGGCTCAAACCTCCAAACCTGGGGAAACA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; CD4T; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392797
mod ID: M6ASITE036653 Click to Show/Hide the Full List
mod site chr18:3597727-3597728:+ [3]
Sequence AGGCCGGCTCAAACCTCCAAACCTGGGGAAACAGGATGCAT
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; A549; H1A; H1B; CD4T; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392798
mod ID: M6ASITE036654 Click to Show/Hide the Full List
mod site chr18:3597737-3597738:+ [3]
Sequence AAACCTCCAAACCTGGGGAAACAGGATGCATGGTGAAGTGA
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; A549; H1A; CD4T; GSC-11; iSLK; MSC; TIME; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000317114.1
External Link RMBase: m6A_site_392799