m6A-centered Crosstalk Information
Mechanism of Crosstalk between m6A Modification and Epigenetic Regulation
| Crosstalk ID |
M6ACROT05882
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[1] | |||
m6A modification
PCAT6
PCAT6
IGF2BP1
: m6A sites
Indirect
Inhibition
Non-coding RNA
miR-513
IGF2BP1
lncRNA miRNA circRNA
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| m6A Modification: | |||||
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| m6A Regulator | Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1) | READER | |||
| m6A Target | Prostate cancer associated transcript 6 (PCAT6) | ||||
| Epigenetic Regulation that have Cross-talk with This m6A Modification: | |||||
| Epigenetic Regulation Type | Non-coding RNA (ncRNA) | ||||
| Epigenetic Regulator | MicroRNA 513a-1 (MIR513A1) | microRNA | View Details | ||
| Regulated Target | Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1) | View Details | |||
| Crosstalk Relationship | m6A → ncRNA | Inhibition | |||
| Crosstalk Mechanism | m6A regulators indirectly modulate the functionality of ncRNAs through downstream signaling pathways | ||||
| Crosstalk Summary | MIR513A1 was a target of Prostate cancer associated transcript 6 (PCAT6) and Insulin like IGF2BP1 was a target of miR-513. Hence, PCAT6 upregulated IGF2BP1 expression via miR-513 in a competing endogenous RNAs manner. PCAT6 and IGF2BP1 functioned as oncogenes while miR-513 acted as a tumor suppressor gene in glioblastoma. PCAT6 and miR-513 modulated the proliferation and survival of glioblastoma cells via AKT signaling by mediating IGF2BP1. IGF2BP1 raised the expression of PCAT6 by increasing its stability. In conclusion, our results indicate that PCAT6/miR-513/IGF2BP1 positive feedback loop plays a crucial role in facilitating glioblastoma progression. | ||||
| Responsed Disease | Glioblastoma | ICD-11: 2A00.00 | |||
| Pathway Response | PI3K-Akt signaling pathway | hsa04151 | |||
| Cell Process | Cell proliferation | ||||
| Cell survival | |||||
| RNA stability | |||||
| Cell Apoptosis | |||||
In-vitro Model |
LN-229 | Glioblastoma | Homo sapiens | CVCL_0393 | |
| A-172 | Glioblastoma | Homo sapiens | CVCL_0131 | ||
Full List of Potential Compound(s) Related to This m6A-centered Crosstalk
| 2A00: Brain cancer | 53 Compound(s) Regulating the Disease | Click to Show/Hide the Full List | ||
| Zinostatin stimalamer | Approved | [2] | ||
| Synonyms |
Smancs (TN)
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| Motexafin gadolinium | Approved | [3] | ||
| Synonyms |
Xcytrin; Gadolinium texaphyrin; GdT2B2; GD-Tex; Motexafin gadolinium (USAN); PCI-0120; Xcytrin (TN)
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| Lomustine | Approved | [4] | ||
| Synonyms |
Belustine; CCNU; CINU; Cecenu; CeeNU; Chloroethylcyclohexylnitrosourea; Lomustina; Lomustinum; Bristol Myers Squibb Brand of Lomustine; CCNU [Chloroethyl nitrosoureas]; Cyclohexyl chloroethyl nitrosourea; Lomustine medac Brand; Medac Brand of Lomustine; Rhone Poulenc Rorer Brand of Lomustine; OR5087; RB 1509; SRI 2200; Bristol-Myers Squibb Brand of Lomustine; CeeNU (TN); Lomustina [INN-Spanish]; Lomustinum [INN-Latin]; NPFAPI-06; Rhone-Poulenc Rorer Brand of Lomustine; CeeNU, CCNU, Lomustine; Lomustine (USAN/INN); Lomustine [USAN:BAN:INN]; N-(2-Chloroethyl)-N'-cyclohexyl-N-nitrosourea; (Chloro-2-ethyl)-1-cyclohexyl-3-nitrosourea; (Cloro-2-etil)-1-cicloesil-3-nitrosourea; (Cloro-2-etil)-1-cicloesil-3-nitrosourea [Italian];1-(2-Chloroethyl)-3-cyclohexyl-1-nitrosourea; 1-(2-Chloroethyl)-3-cyclohexyl-1-nitrosourea [Chloroethyl nitrosoureas]; 1-(2-Chloroethyl)-3-cyclohexylnitrosourea
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| Borocaptate sodium B 10 | Approved | [2] | ||
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| DTI-015 | Approved | [5] | ||
| Synonyms |
Carmustine; 154-93-8; 1,3-Bis(2-chloroethyl)-1-nitrosourea; BCNU; Carmustin; Nitrumon; Carmubris; Gliadel; BiCNU; Bi CNU; Carmustinum; Bischlorethylnitrosurea; Bischlorethylnitrosourea; Carmustina; Becenun; Becenum; Bischloroethyl nitrosourea; N,N'-BIS(2-CHLOROETHYL)-N-NITROSOUREA; Bis(2-chloroethyl)nitrosourea; Urea, N,N'-bis(2-chloroethyl)-N-nitroso-; Gliadel Wafer; FDA 0345; Bischloroethylnitrosourea; SRI 1720; 1,3-Bis(2-chloroethyl)nitrosourea; BiCNU (TN); Carmustinum [INN-Latin]; Carmustina [INN-Spanish]; DTI 015; NCI-C04773; SK; Injectable carmustine, Direct Therapeutics
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| Prinomastat | Approved | [6] | ||
| Synonyms |
AG-3354; AG-3362; Prinomastat (USAN/INN); (3S)-N-hydroxy-2,2-dimethyl-4-(4-pyridin-4-yloxyphenyl)sulfonylthiomorpholine-3-carboxamide
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| INO-1001 | Phase 3 | [7] | ||
| Synonyms |
Hypoxanthine arabinoside; LT00454797; 9-[(3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one
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| GliAtak | Phase 3 | [8] | ||
| Synonyms |
GliAtak (TN)
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| SOT-107 | Phase 3 | [9] | ||
| Synonyms |
TransMID
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| ICT-107 | Phase 3 | [10] | ||
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| Cintredekin besudotox | Phase 3 | [11] | ||
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| Rindopepimut | Phase 3 | [12] | ||
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| DCVax-Ovarian | Phase 3 | [13] | ||
| Synonyms |
DCVax-L; Dendritic cell-based immunotherapy (ovarian cancer), Northwest Biotherapeutics
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| DCVax-Brain | Phase 3 | [14] | ||
| Synonyms |
Dendritic cell-based immunotherapy (brain cancer), Northwest Biotherapeutics
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| TVI-Brain-1 | Phase 2/3 | [15] | ||
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| NLG8189 | Phase 2/3 | [16] | ||
| Synonyms |
1-Methyl-D-tryptophan; Indoximod; 110117-83-4; D-Tryptophan, 1-methyl-; D-1MT; Indoximod (NLG-8189); D-1-methyltryptophan; UNII-TX5CYN1KMZ; D-(+)-1-Methyltryptophan; TX5CYN1KMZ; (R)-2-amino-3-(1-methyl-1H-indol-3-yl)propanoic acid; (2R)-2-amino-3-(1-methylindol-3-yl)propanoic acid; NSC-721782; (2R)-2-amino-3-(1-methyl-3-indolyl)propanoic acid; 1-MT; (2R)-2-azanyl-3-(1-methylindol-3-yl)propanoic acid; (2R)-2-amino-3-(1-methyl-1H-indol-3-yl)propanoic acid; D-l-Methyltryptophan; Indoximod [USAN:INN]; NLG-8189; NLG 8189
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| Synthetic survivin peptide vaccine | Phase 2 | [17] | ||
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| Fresolimumab | Phase 2 | [18] | ||
| Synonyms |
GC-1008
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| DNX-2401 | Phase 2 | [19] | ||
| Synonyms |
Tasadenoturev
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| TVI-Brain-1 cancer vaccine | Phase 2 | [20] | ||
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| PDT with Photofrin | Phase 2 | [16] | ||
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| F18-ML-10 | Phase 2 | [21] | ||
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| PT2385 | Phase 2 | [22] | ||
| Synonyms |
ONBSHRSJOPSEGS-INIZCTEOSA-N; PT-2385; UNII-6O16716DXP; 1672665-49-4; 6O16716DXP; SCHEMBL16555810; ZINC230453533; AKOS030526641; HY-12867; PT2385,1672665-49-4, PT 2385,PT-2385; Benzonitrile, 3-(((1S)-2,2-difluoro-2,3-dihydro-1-hydroxy-7-(methylsulfonyl)-1H-inden-4-yl)oxy)-5-fluoro-; 3-{[(1s)-2,2-Difluoro-1-Hydroxy-7-(Methylsulfonyl)-2,3-Dihydro-1h-Inden-4-Yl]oxy}-5-Fluorobenzonitrile; 3-(((1S)-2,2-Difluoro-1-hydroxy-7-methanesulfonyl-2,3-dihydro-1hinden-4-yl)oxy)-5-fluorobenzonitrile; 79A
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| ABT-414 | Phase 2 | [23] | ||
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| CLR1404-I-124 | Phase 1/2 | [24] | ||
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| DM-CHOC-PEN | Phase 2 | [25] | ||
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| L-alanosine | Phase 2 | [26] | ||
| Synonyms |
SDX-102
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| APX005M | Phase 2 | [16] | ||
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| WP-1066 | Phase 1/2 | [20] | ||
| Synonyms |
WP1066; 857064-38-1; (S,E)-3-(6-Bromopyridin-2-yl)-2-cyano-N-(1-phenylethyl)acrylamide; WP 1066; UNII-63V8AIE65T; 63V8AIE65T; AK-99218; C17H14BrN3O; (E)-3-(6-bromopyridin-2-yl)-2-cyano-N-[(1S)-1-phenylethyl]prop-2-enamide; MLS006010178; SCHEMBL1315826; QCR-16; SCHEMBL1315831; GTPL7972; CHEMBL1923234; EX-A760; AOB1497; DTXSID50235007; MolPort-044-723-708; MolPort-023-219-149; ZINC13983221; AKOS016007983; WP1066/WP-1066; CS-2736; DB12679; 2-Propenamide, 3-(6-bromo-2-pyridinyl)-2-cyano-N-((1S)-1-phenylethyl)-, (2E)-; HY-15312
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| Anti-EGFRvIII CAR transduced PBL | Phase 1/2 | [27] | ||
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| RG6156 | Phase 1 | [28] | ||
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| rhenium-186 | Phase 1 | [29] | ||
| Synonyms |
(~186~Re)Rhenium; 14998-63-1; 186Re; DTXSID60933825; Q18882928; RHENIUM (186-RE); Rhenium Re-186; Rhenium, isotope of mass 186; Rhenium-186; RHENIUM-186 [WHO-DD]; UNII-ZU7F1ET6TM; ZU7F1ET6TM
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| IGV-001 | Phase 1 | [30] | ||
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| DA-3607 | Phase 1 | [31] | ||
| Synonyms |
Ad-stTRAIL; TRAIL adenoviral gene therapy (cancer), Dong-A
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| DC/I540/KLH vaccine | Phase 1 | [32] | ||
| Synonyms |
HTERT:540-548; Telomerase: 540-548 peptide vaccine; DC/I540/KLH vaccine (cancer); Dendritic cell/hTERT peptide I540/keyhole limpet hemocyanin vaccine, Dana-Farber; DC/I540/KLH vaccine (cancer), Dana-Farber
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| KX2-361 | Phase 1 | [33] | ||
| Synonyms |
KX-02
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| MR1-1 | Phase 1 | [34] | ||
| Synonyms |
MR1-1KDEL; EGFR-specific immunotoxin, IVAX; Anticancer immunotoxin (EGFR-specific), IVAX
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| INdoximod + temozolomide | Phase 1 | [20] | ||
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| Anti-CD133-CAR vector-transduced T cells | Phase 1 | [35] | ||
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| 8H9 | Phase 1 | [36] | ||
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| CC-8490 | Phase 1 | [37] | ||
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| Sitimagene ceradenovec | Discontinued in Phase 3 | [38] | ||
| Synonyms |
Cerepro; EG-009; HSV thymidine kinase gene therapy, Ark
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| Ranagengliotucel-T | Discontinued in Phase 3 | [39] | ||
| Synonyms |
Glionix; Brain tumor vaccine, NovaRx; Antisense (TGFbeta) brain tumor vaccine, NovaRx
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| Oncolysin S | Discontinued in Phase 2 | [40] | ||
| Synonyms |
N901-bR
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| Labradimil | Discontinued in Phase 2 | [41] | ||
| Synonyms |
Cereport; Lobradimil; Receptor mediated permeabilizer; RMP 7; DRG-0182; RMP-7; N2-((S)-2-(L-Arginyl-L-prolyl-trans-4-hydroxy-L-prolylglycyl-3-(2-thienyl)-L-alanyl-L-seryl-L-prolinamido)-3-(p-methoxyphenyl)propyl)-L-arginine; (S-(R*,R*))-L-Arginyl-L-prolyl-trans-4-hydroxy-L-prolyl-3-(2-thienyl)-L-alanylglycyl-L-seryl-N-(2-((4-((aminoiminomethyl)amino)-1-carboxybutyl)amino)-1-((4-methoxyphenyl)methyl)ethyl)-L-prolinamide
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| Brain tumor vaccine | Discontinued in Phase 1 | [42] | ||
| Synonyms |
Brain cancer vaccine, IRC; Brain tumor vaccine, IRC; IR-850; Established cancer cell line therapy (brain cancer), IRC; GM-CSF vaccine (brain cancer), IRC
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| PCNU | Terminated | [43] | ||
| Synonyms |
NSC-95466
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| 131I-81C6 | Terminated | [44] | ||
| Synonyms |
Neuradiab; MAb-81C6; Iodine-131-81C6; Astatine-211-MAb-81C6; Iodine-131-MAb-81C6; Iodine-131-ch-81C6; Iodine-131-ch-81C6-F(ab)2; 211At-MAb-81C6
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| NSD-551 | Terminated | [45] | ||
| Synonyms |
BK channel activator (cancer), NeuroSearch/TopoTarget
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| AGT-2000 | Investigative | [46] | ||
| Synonyms |
Gene therapy (intravenous, brain cancer), ArmaGen
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| NV.XOD.09 | Investigative | [47] | ||
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| EDP-19 | Investigative | [47] | ||
| Synonyms |
SiRNA (convection-enhanced delivery, brain tumor), Sheba Medical Center/BioLineRx
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| MIQ-004 | Investigative | [47] | ||
| Synonyms |
M-IQ-004
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References
: m6A sites