Mechanism of Crosstalk between m6A Modification and Epigenetic Regulation
Crosstalk ID
M6ACROT00541
[1], [2], [3]
RNA modification MIR200B MIR200B YBX1 : modification sites Indirect Inhibition m6A modification FSCN1 FSCN1 METTL3 Methylation : m6A sites
m6A Modification:
m6A Regulator Methyltransferase-like 3 (METTL3) WRITER
m6A Target Fascin (FSCN1)
Epigenetic Regulation that have Cross-talk with This m6A Modification:
Epigenetic Regulation Type RNA modification (RNAMod)  >> 5-methylcytidine (m5C)
Epigenetic Regulator Y-box-binding protein 1 (YBX1) READER View Details
Regulated Target MicroRNA 200b (MIR200B) View Details
Crosstalk Relationship m5C  →  m6A Inhibition
Crosstalk Mechanism RNA modification indirectly impacts m6A modification through downstream signaling pathways
Crosstalk Summary YBX1 interacts with MicroRNA 200b (MIR200B), reading its m5C sites and inhibiting its physical interaction with Fascin (FSCN1), which was regulated by METTL3-mediated m6A modification.
In-vitro Model
HEK293T Normal Homo sapiens CVCL_0063
HCCLM3 Adult hepatocellular carcinoma Homo sapiens CVCL_6832
BEL-7402 Endocervical adenocarcinoma Homo sapiens CVCL_5492
Full List of Potential Compound(s) Related to This m6A-centered Crosstalk
Fascin (FSCN1) 1 Compound(s) Regulating the Target Click to Show/Hide the Full List
 Compound Name NP-G2-044 Phase 1 [4]
Synonyms
1ER2O3UZ4W; UNII-1ER2O3UZ4W; SCHEMBL17038863; 3-Furancarboxamide, 2-methyl-N-(1-((4-(trifluoromethyl)phenyl)methyl)-1H-indazol-3-yl)-; 2-Methyl-N-(1-((4-(trifluoromethyl)phenyl)methyl)-1H-indazol-3-yl)-3-furancarboxamide; 1807454-59-6
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MOA Inhibitor
External Link
References
Ref 1 Recognition of RNA N(6)-methyladenosine by IGF2BP proteins enhances mRNA stability and translation. Nat Cell Biol. 2018 Mar;20(3):285-295. doi: 10.1038/s41556-018-0045-z. Epub 2018 Feb 23.
Ref 2 YB1 regulates miR-205/200b-ZEB1 axis by inhibiting microRNA maturation in hepatocellular carcinoma. Cancer Commun (Lond). 2021 Jul;41(7):576-595. doi: 10.1002/cac2.12164. Epub 2021 Jun 10.
Ref 3 MiR-200b/c family inhibits renal fibrosis through modulating epithelial-to-mesenchymal transition via targeting fascin-1/CD44 axis. Life Sci. 2020 Jul 1;252:117589. doi: 10.1016/j.lfs.2020.117589. Epub 2020 Mar 24.
Ref 4 Clinical pipeline report, company report or official report of the Pharmaceutical Research and Manufacturers of America (PhRMA)