m6A Target Genes of This Regulator

General Information of the m6A Regulator (ID: REG00020)
Regulator Name RNA-binding motif protein 15 (RBM15)
Synonyms
One-twenty two protein 1; RNA-binding protein 15; OTT; OTT1
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Gene Name RBM15
Regulator Type ERASER READER WRITER
Regulator Link Click to View Full Information of This Regulator
Full List of Target Gene(s) of This m6A Regulator ( Full Data Download )
Protein coding
Gene with protein product
In total 8923 target gene(s)
24-dehydrocholesterol reductase (DHCR24) [1]
HGNC ID HGNC:2859
Ensembl ID ENSG00000116133
Uniprot ID DHC24_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
3-hydroxyacyl-CoA dehydratase 4 (HACD4) [1]
HGNC ID HGNC:20920
Ensembl ID ENSG00000188921
Uniprot ID HACD4_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
5-phosphohydroxy-L-lysine phospho-lyase (PHYKPL) [1]
HGNC ID HGNC:28249
Ensembl ID ENSG00000175309
Uniprot ID AT2L2_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (PFKFB3) [1]
HGNC ID HGNC:8874
Ensembl ID ENSG00000170525
Uniprot ID F263_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
A-kinase anchoring protein 8 (AKAP8) [1]
HGNC ID HGNC:378
Ensembl ID ENSG00000105127
Uniprot ID AKAP8_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Abl interactor 2 (ABI2) [1]
HGNC ID HGNC:24011
Ensembl ID ENSG00000138443
Uniprot ID ABI2_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Acetyl-CoA acetyltransferase 1 (ACAT1) [1]
HGNC ID HGNC:93
Ensembl ID ENSG00000075239
Uniprot ID THIL_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Acid sensing ion channel subunit 2 (ASIC2) [1]
HGNC ID HGNC:99
Ensembl ID ENSG00000108684
Uniprot ID ASIC2_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Actin gamma 1 (ACTG1) [1]
HGNC ID HGNC:144
Ensembl ID ENSG00000184009
Uniprot ID ACTG_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Actin related protein T1 (ACTRT1) [1]
HGNC ID HGNC:24027
Ensembl ID ENSG00000123165
Uniprot ID ACTT1_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Pseudogene
Immunoglobulin pseudogene
In total 1 target gene(s)
Immunoglobulin heavy constant epsilon P2 (pseudogene) (IGHEP2) [2]
HGNC ID HGNC:5524
Ensembl ID ENSG00000254017
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.751974922; p-value: 0.001014914
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Pseudogene
In total 541 target gene(s)
Ankyrin repeat domain 19, pseudogene (ANKRD19P) [1]
HGNC ID HGNC:22567
Ensembl ID ENSG00000187984
Uniprot ID ANR19_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Apolipoprotein O pseudogene 5 (APOOP5) [1]
HGNC ID HGNC:48743
Ensembl ID ENSG00000260240
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Caspase 16, pseudogene (CASP16P) [1]
HGNC ID HGNC:27290
Ensembl ID ENSG00000228146
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Dihydrofolate reductase pseudogene 3 (DHFRP3) [1]
HGNC ID HGNC:52354
Ensembl ID ENSG00000168129
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EP400 pseudogene 1 (EP400NL) [1]
HGNC ID HGNC:26602
Ensembl ID ENSG00000185684
Uniprot ID E400N_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Family with sequence similarity 169 member B (FAM169B) [1]
HGNC ID HGNC:26835
Ensembl ID ENSG00000283597
Uniprot ID F169B_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Family with sequence similarity 86 member C2, pseudogene (FAM86C2P) [1]
HGNC ID HGNC:42392
Ensembl ID ENSG00000160172
Uniprot ID F86C2_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
FSHD region gene 2 family member E, pseudogene (FRG2EP) [1]
HGNC ID HGNC:51365
Ensembl ID ENSG00000282842
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Glutamate dehydrogenase 1 pseudogene 3 (GLUD1P3) [1]
HGNC ID HGNC:4338
Ensembl ID ENSG00000250959
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Glycerol kinase 3 pseudogene (GK3P) [1]
HGNC ID HGNC:4292
Ensembl ID ENSG00000229894
Uniprot ID GLPK3_HUMAN
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Long non-coding
Long non-coding RNA
In total 656 target gene(s)
AGBL5 antisense RNA 1 (AGBL5-AS1) [1]
HGNC ID HGNC:41133
Ensembl ID ENSG00000231636
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ARHGAP31 antisense RNA 1 (ARHGAP31-AS1) [1]
HGNC ID HGNC:41235
Ensembl ID ENSG00000241155
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
B4GAT1 divergent transcript (LOC102724064) [1]
HGNC ID HGNC:56070
Ensembl ID ENSG00000255468
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
C16orf95 divergent transcript (LOC101928659) [1]
HGNC ID HGNC:55269
Ensembl ID ENSG00000270006
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
DNAH17 antisense RNA 1 (DNAH17-AS1) [1]
HGNC ID HGNC:48594
Ensembl ID ENSG00000267432
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EP300 antisense RNA 1 (EP300-AS1) [1]
HGNC ID HGNC:50504
Ensembl ID ENSG00000231993
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EPN2 intronic transcript 1 (EPN2-IT1) [1]
HGNC ID HGNC:41445
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
FGD5 antisense RNA 1 (FGD5-AS1) [1]
HGNC ID HGNC:40410
Ensembl ID ENSG00000225733
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
FOXN3 antisense RNA 2 (FOXN3-AS2) [1]
HGNC ID HGNC:30119
Ensembl ID ENSG00000259073
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Ghrelin opposite strand/antisense RNA (GHRLOS) [1]
HGNC ID HGNC:33885
Ensembl ID ENSG00000240288
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Short non-coding
Micro RNA
In total 54 target gene(s)
MicroRNA 1226 (MIR1226) [1]
HGNC ID HGNC:33922
Ensembl ID ENSG00000221585
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 1244-1 (MIR1244-1) [1]
HGNC ID HGNC:35310
Ensembl ID ENSG00000284378
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 125b-2 (MIR125B2) [1]
HGNC ID HGNC:31507
Ensembl ID ENSG00000207863
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 1292 (MIR1292) [1]
HGNC ID HGNC:35364
Ensembl ID ENSG00000284481
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 133a-1 (MIR133A1) [1]
HGNC ID HGNC:31517
Ensembl ID ENSG00000283927
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 1343 (MIR1343) [1]
HGNC ID HGNC:41902
Ensembl ID ENSG00000251862
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 1825 (MIR1825) [1]
HGNC ID HGNC:35389
Ensembl ID ENSG00000284125
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 196b (MIR196B) [1]
HGNC ID HGNC:31790
Ensembl ID ENSG00000283745
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 197 (MIR197) [1]
HGNC ID HGNC:31569
Ensembl ID ENSG00000284443
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 222 (MIR222) [1]
HGNC ID HGNC:31602
Ensembl ID ENSG00000207725
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Misc RNA
In total 3 target gene(s)
Ribonuclease P RNA component H1 (RPPH1) [1]
HGNC ID HGNC:19273
Ensembl ID ENSG00000277209
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA component of mitochondrial RNA processing endoribonuclease (RMRP) [1]
HGNC ID HGNC:10031
Ensembl ID ENSG00000277027
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small NF90 (ILF3) associated RNA I (SNAR-I) [1]
HGNC ID HGNC:34330
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Ribosomal RNA
In total 13 target gene(s)
RNA, 18S ribosomal 5 (RNA18S5) [1]
HGNC ID HGNC:37657
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 28S ribosomal 5 (RNA28S5) [1]
HGNC ID HGNC:37659
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 45S pre-ribosomal 5 (RNA45S5) [1]
HGNC ID HGNC:44273
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5.8S ribosomal 5 (RNA5-8S5) [1]
HGNC ID HGNC:37660
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 5 (RNA5S5) [1]
HGNC ID HGNC:34366
Ensembl ID ENSG00000199396
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 9 (RNA5S9) [1]
HGNC ID HGNC:34370
Ensembl ID ENSG00000201321
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Mitochondrially encoded 12S rRNA (MT-RNR1) [2]
HGNC ID HGNC:7470
Ensembl ID ENSG00000211459
Uniprot ID MOTSC_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.736454044; p-value: 0.027875666
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Mitochondrially encoded 16S rRNA (MT-RNR2) [2]
HGNC ID HGNC:7471
Ensembl ID ENSG00000210082
Uniprot ID HUNIN_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.69036088; p-value: 0.046050539
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
RNA, 5.8S ribosomal N1 (RNA5-8SN1) [2]
HGNC ID HGNC:53517
Ensembl ID ENSG00000278189
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.040044921; p-value: 0.001849323
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
RNA, 5.8S ribosomal N2 (RNA5-8SN2) [2]
HGNC ID HGNC:53521
Ensembl ID ENSG00000278233
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 0.592605953; p-value: 0.002562884
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Small nuclear RNA
In total 20 target gene(s)
RNA, U11 small nuclear (RNU11) [1]
HGNC ID HGNC:10108
Ensembl ID ENSG00000274978
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U12 small nuclear (RNU12) [1]
HGNC ID HGNC:19380
Ensembl ID ENSG00000276027
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4 small nuclear 1 (RNU4-1) [1]
HGNC ID HGNC:10192
Ensembl ID ENSG00000200795
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4 small nuclear 2 (RNU4-2) [1]
HGNC ID HGNC:10193
Ensembl ID ENSG00000202538
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4atac small nuclear (RNU4ATAC) [1]
HGNC ID HGNC:34016
Ensembl ID ENSG00000264229
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5A small nuclear 1 (RNU5A-1) [1]
HGNC ID HGNC:10211
Ensembl ID ENSG00000199568
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5B small nuclear 1 (RNU5B-1) [1]
HGNC ID HGNC:10212
Ensembl ID ENSG00000200156
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5D small nuclear 1 (RNU5D-1) [1]
HGNC ID HGNC:10214
Ensembl ID ENSG00000200169
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5E small nuclear 1 (RNU5E-1) [1]
HGNC ID HGNC:10215
Ensembl ID ENSG00000199347
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5F small nuclear 1 (RNU5F-1) [1]
HGNC ID HGNC:10216
Ensembl ID ENSG00000199377
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Small nucleolar RNA
In total 30 target gene(s)
Small Cajal body-specific RNA 2 (SCARNA2) [1]
HGNC ID HGNC:32558
Ensembl ID ENSG00000278249
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 117 (SNORD117) [1]
HGNC ID HGNC:32742
Ensembl ID ENSG00000201785
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 118 (SNORD118) [1]
HGNC ID HGNC:32952
Ensembl ID ENSG00000200463
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 134 (SNORD134) [1]
HGNC ID HGNC:50415
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 14A (SNORD14A) [1]
HGNC ID HGNC:10113
Ensembl ID ENSG00000272034
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 1A (SNORD1A) [1]
HGNC ID HGNC:32556
Ensembl ID ENSG00000278261
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 35B (SNORD35B) [1]
HGNC ID HGNC:17365
Ensembl ID ENSG00000200530
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 37 (SNORD37) [1]
HGNC ID HGNC:10166
Ensembl ID ENSG00000206775
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 38A (SNORD38A) [1]
HGNC ID HGNC:30355
Ensembl ID ENSG00000202031
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small nucleolar RNA, C/D box 3C (SNORD3C) [1]
HGNC ID HGNC:33191
Ensembl ID ENSG00000264940
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Transfer RNA
In total 2 target gene(s)
Mitochondrially encoded tRNA-Gln (CAA/G) (MT-TQ) [2]
HGNC ID HGNC:7495
Ensembl ID ENSG00000210107
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 1.037351506; p-value: 0.026345204
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Mitochondrially encoded tRNA-Ser (UCN) 1 (MT-TS1) [2]
HGNC ID HGNC:7497
Ensembl ID ENSG00000210151
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.730688241; p-value: 0.033925405
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Vault RNA
In total 3 target gene(s)
Vault RNA 1-1 (VTRNA1-1) [1]
HGNC ID HGNC:12654
Ensembl ID ENSG00000199990
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Vault RNA 1-2 (VTRNA1-2) [1]
HGNC ID HGNC:12655
Ensembl ID ENSG00000202111
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Vault RNA 1-3 (VTRNA1-3) [1]
HGNC ID HGNC:12656
Ensembl ID ENSG00000202515
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Y RNA
In total 2 target gene(s)
RNA, Ro60-associated Y1 (RNY1) [1]
HGNC ID HGNC:10242
Ensembl ID ENSG00000201098
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, Ro60-associated Y5 (RNY5) [1]
HGNC ID HGNC:10248
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Other
Complex locus constituent
In total 1 target gene(s)
Protocadherin alpha 7 (PCDHA7) [2]
HGNC ID HGNC:8673
Ensembl ID ENSG00000204963
Uniprot ID PCDA7_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.682925237; p-value: 0.013770251
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Endogenous retrovirus
In total 2 target gene(s)
Endogenous retrovirus group K3 member 1 (ERVK3-1) [2]
HGNC ID HGNC:30466
Ensembl ID ENSG00000142396
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 0.925341393; p-value: 0.000548825
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Endogenous retrovirus group K9, member 11 (ERVK9-11) [2]
HGNC ID HGNC:51160
Ensembl ID ENSG00000269486
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.361121977; p-value: 0.000583243
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Protocadherin
In total 16 target gene(s)
Protocadherin beta 16 (PCDHB16) [2]
HGNC ID HGNC:14546
Ensembl ID ENSG00000272674
Uniprot ID PCDBG_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.944791716; p-value: 0.004691306
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin beta 2 (PCDHB2) [2]
HGNC ID HGNC:8687
Ensembl ID ENSG00000112852
Uniprot ID PCDB2_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.040403183; p-value: 0.013266091
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin beta 7 (PCDHB7) [2]
HGNC ID HGNC:8692
Ensembl ID ENSG00000113212
Uniprot ID PCDB7_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.888853918; p-value: 0.002808442
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 10 (PCDHGA10) [2]
HGNC ID HGNC:8697
Ensembl ID ENSG00000253846
Uniprot ID PCDGA_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.967718151; p-value: 0.001304081
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 11 (PCDHGA11) [2]
HGNC ID HGNC:8698
Ensembl ID ENSG00000253873
Uniprot ID PCDGB_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.7583882; p-value: 0.008664307
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 12 (PCDHGA12) [2]
HGNC ID HGNC:8699
Ensembl ID ENSG00000253159
Uniprot ID PCDGC_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.696172331; p-value: 0.013089648
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 2 (PCDHGA2) [2]
HGNC ID HGNC:8700
Ensembl ID ENSG00000081853
Uniprot ID PCDG2_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.720405213; p-value: 0.003560651
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 3 (PCDHGA3) [2]
HGNC ID HGNC:8701
Ensembl ID ENSG00000254245
Uniprot ID PCDG3_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.766902964; p-value: 0.000201492
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 4 (PCDHGA4) [2]
HGNC ID HGNC:8702
Ensembl ID ENSG00000262576
Uniprot ID PCDG4_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.778294717; p-value: 0.012756018
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Protocadherin gamma subfamily A, 7 (PCDHGA7) [2]
HGNC ID HGNC:8705
Ensembl ID ENSG00000253537
Uniprot ID PCDG7_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.002905809; p-value: 0.009430872
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Readthrough
In total 49 target gene(s)
CENPS-CORT readthrough (APITD1-CORT) [1]
HGNC ID HGNC:38843
Ensembl ID ENSG00000251503
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
GPR75-ASB3 readthrough (GPR75-ASB3) [1]
HGNC ID HGNC:40043
Ensembl ID ENSG00000270898
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
SENP3-EIF4A1 readthrough (NMD candidate) (SENP3-EIF4A1) [1]
HGNC ID HGNC:49182
Ensembl ID ENSG00000277957
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ABHD14A-ACY1 readthrough (ABHD14A-ACY1) [2]
HGNC ID HGNC:38856
Ensembl ID ENSG00000114786
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 1.16178517; p-value: 0.000939117
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
ANKHD1-EIF4EBP3 readthrough (ANKHD1-EIF4EBP3) [2]
HGNC ID HGNC:33530
Ensembl ID ENSG00000254996
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.332838957; p-value: 0.021415109
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
ARHGAP19-SLIT1 readthrough (NMD candidate) (ARHGAP19-SLIT1) [2]
HGNC ID HGNC:48348
Ensembl ID ENSG00000269891
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 1.76026076; p-value: 0.000288955
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene (ARHGAP27P1-BPTFP1-KPNA2P3) [2]
HGNC ID HGNC:52873
Ensembl ID ENSG00000215769
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -1.218221115; p-value: 9.47E-10
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
ARMCX5-GPRASP2 readthrough (ARMCX5-GPRASP2) [2]
HGNC ID HGNC:42000
Ensembl ID ENSG00000271147
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.946516825; p-value: 8.83E-08
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
ARPIN-AP3S2 readthrough (ARPIN-AP3S2) [2]
HGNC ID HGNC:38824
Ensembl ID ENSG00000250021
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 2.311700714; p-value: 0.045046051
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
ATF7-NPFF readthrough (ATF7-NPFF) [2]
HGNC ID HGNC:55073
Ensembl ID ENSG00000267281
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.704131537; p-value: 0.049121133
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
T cell receptor gene
In total 2 target gene(s)
T cell receptor beta constant 2 (TRBC2) [2]
HGNC ID HGNC:12157
Ensembl ID ENSG00000211772
Uniprot ID TRBC2_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 0.831875197; p-value: 0.00070183
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
T cell receptor beta variable 12-4 (TRBV12-4) [2]
HGNC ID HGNC:12186
Ensembl ID ENSG00000276953
Uniprot ID TVBL4_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.731861071; p-value: 0.022283893
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Unknown
In total 7 target gene(s)
Chromosome 10 putative open reading frame 55 (C10orf55) [2]
HGNC ID HGNC:31008
Ensembl ID ENSG00000222047
Uniprot ID CJ055_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 0.804721266; p-value: 0.042774182
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Chromosome 19 putative open reading frame 48 (C19orf48) [2]
HGNC ID HGNC:29667
Ensembl ID ENSG00000167747
Uniprot ID CS048_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.955229624; p-value: 0.001574026
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Chromosome 22 putative open reading frame 46 (C22orf46) [2]
HGNC ID HGNC:26294
Ensembl ID ENSG00000184208
Uniprot ID CV046_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.701391699; p-value: 0.023487689
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
FKBP prolyl isomerase family member 1C (FKBP1C) [2]
HGNC ID HGNC:21376
Ensembl ID ENSG00000198225
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: -0.848179807; p-value: 0.002967599
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Long intergenic non-protein coding RNA 672 (LINC00672) [2]
HGNC ID HGNC:44353
Ensembl ID ENSG00000263874
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 1.754448966; p-value: 3.16E-10
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Ribosomal protein S27a pseudogene 5 (RPS27AP5) [2]
HGNC ID HGNC:36867
Ensembl ID ENSG00000231767
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 1.393815533; p-value: 1.34E-06
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Zinc finger protein 883 (ZNF883) [2]
HGNC ID HGNC:27271
Ensembl ID ENSG00000228623
Uniprot ID ZN883_HUMAN
Method RNA-seq GSE154148
Condition knock down
Evidence logFC: 1.484399515; p-value: 0.01758049
Cell Line Human BJ Fibroblast Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
References
Ref 1 m(6)A RNA methylation promotes XIST-mediated transcriptional repression. Nature. 2016 Sep 15;537(7620):369-373. doi: 10.1038/nature19342. Epub 2016 Sep 7.
Ref 2 Diverse Heterochromatin-Associated Proteins Repress Distinct Classes of Genes and Repetitive Elements (RNA-seq)