m6A Target Genes of This Regulator

General Information of the m6A Regulator (ID: REG00014)
Regulator Name Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2BP3)
Synonyms
IGF2 mRNA-binding protein 3; IMP-3; IGF-II mRNA-binding protein 3; KH domain-containing protein overexpressed in cancer; hKOC; VICKZ family member 3; IMP3; KOC1; VICKZ3
    Click to Show/Hide
Gene Name IGF2BP3
Regulator Type ERASER READER WRITER
Regulator Link Click to View Full Information of This Regulator
Full List of Target Gene(s) of This m6A Regulator ( Full Data Download )
Protein coding
Gene with protein product
In total 9100 target gene(s)
5'-3' exoribonuclease 2 (XRN2) [1]
HGNC ID HGNC:12836
Ensembl ID ENSG00000088930
Uniprot ID XRN2_HUMAN
Method RIP-seq logFC: 2.09E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (ATIC) [1]
HGNC ID HGNC:794
Ensembl ID ENSG00000138363
Uniprot ID PUR9_HUMAN
Method RIP-seq logFC: 1.62E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
6-phosphogluconolactonase (PGLS) [1]
HGNC ID HGNC:8903
Ensembl ID ENSG00000130313
Uniprot ID 6PGL_HUMAN
Method RIP-seq logFC: 1.31E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Acidic nuclear phosphoprotein 32 family member B (ANP32B) [1]
HGNC ID HGNC:16677
Ensembl ID ENSG00000136938
Uniprot ID AN32B_HUMAN
Method RIP-seq logFC: 1.45E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Actin beta (ACTB) [1]
HGNC ID HGNC:132
Ensembl ID ENSG00000075624
Uniprot ID ACTB_HUMAN
Method RIP-seq logFC: 1.21E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Actin gamma 1 (ACTG1) [1]
HGNC ID HGNC:144
Ensembl ID ENSG00000184009
Uniprot ID ACTG_HUMAN
Method RIP-seq logFC: 2.49E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Activating transcription factor 4 (ATF4) [1]
HGNC ID HGNC:786
Ensembl ID ENSG00000128272
Uniprot ID ATF4_HUMAN
Method RIP-seq logFC: 2.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Adipocyte plasma membrane associated protein (APMAP) [1]
HGNC ID HGNC:13238
Ensembl ID ENSG00000101474
Uniprot ID APMAP_HUMAN
Method RIP-seq logFC: 1.15E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ADP ribosylation factor like GTPase 6 interacting protein 1 (ARL6IP1) [1]
HGNC ID HGNC:697
Ensembl ID ENSG00000170540
Uniprot ID AR6P1_HUMAN
Method RIP-seq logFC: 1.69E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (MGAT2) [1]
HGNC ID HGNC:7045
Ensembl ID ENSG00000168282
Uniprot ID MGAT2_HUMAN
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Pseudogene
Immunoglobulin pseudogene
In total 1 target gene(s)
Immunoglobulin kappa variable 1/OR9-2 (pseudogene) (IGKV1OR9-2) [1]
HGNC ID HGNC:49466
Ensembl ID ENSG00000225380
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Pseudogene
In total 518 target gene(s)
ADAM metallopeptidase domain 1A (pseudogene) (ADAM1A) [1]
HGNC ID HGNC:187
Ensembl ID ENSG00000229186
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Adenylate kinase 4 pseudogene 1 (AK4P1) [1]
HGNC ID HGNC:364
Ensembl ID ENSG00000263535
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Ankyrin repeat domain 20 family member A4, pseudogene (ANKRD20A4) [1]
HGNC ID HGNC:31982
Ensembl ID ENSG00000172014
Uniprot ID A20A4_HUMAN
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Ankyrin repeat domain 20 family member A7, pseudogene (ANKRD20A7P) [1]
HGNC ID HGNC:31980
Ensembl ID ENSG00000236816
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
ASNS pseudogene 1 (ASNSP1) [1]
HGNC ID HGNC:754
Ensembl ID ENSG00000248498
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Autophagy related 12 pseudogene 2 (ATG12P2) [1]
HGNC ID HGNC:38605
Ensembl ID ENSG00000224121
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Basic transcription factor 3 like 4 pseudogene 2 (BTF3L4P2) [1]
HGNC ID HGNC:39646
Ensembl ID ENSG00000213189
Method RIP-seq logFC: 3.71E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
BMS1 pseudogene 10 (BMS1P10) [1]
HGNC ID HGNC:49154
Ensembl ID ENSG00000237238
Method RIP-seq logFC: 5.63E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
BMS1 pseudogene 22 (BMS1P22) [1]
HGNC ID HGNC:51603
Ensembl ID ENSG00000232775
Method RIP-seq logFC: 1.73E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
BMS1 pseudogene 8 (BMS1P8) [1]
HGNC ID HGNC:49152
Ensembl ID ENSG00000260518
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
T cell receptor pseudogene
In total 1 target gene(s)
T cell receptor beta variable 26/OR9-2 (pseudogene) (TRBV26OR9-2) [1]
HGNC ID HGNC:15485
Ensembl ID ENSG00000231165
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Long non-coding
Long non-coding RNA
In total 773 target gene(s)
ANKRD10 intronic transcript 1 (ANKRD10-IT1) [1]
HGNC ID HGNC:39891
Ensembl ID ENSG00000229152
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
C6orf47 antisense RNA 1 (C6orf47-AS1) [1]
HGNC ID HGNC:39767
Ensembl ID ENSG00000227198
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EIPR1 intronic transcript 1 (TSSC1-IT1) [1]
HGNC ID HGNC:41392
Ensembl ID ENSG00000224885
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EP300 antisense RNA 1 (EP300-AS1) [1]
HGNC ID HGNC:50504
Ensembl ID ENSG00000231993
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EPB41L4A antisense RNA 1 (EPB41L4A-AS1) [1]
HGNC ID HGNC:30749
Ensembl ID ENSG00000224032
Method RIP-seq logFC: 1.24E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Growth arrest specific 5 (GAS5) [1]
HGNC ID HGNC:16355
Ensembl ID ENSG00000234741
Method RIP-seq logFC: 1.23E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
INKA2 antisense RNA 1 (FAM212B-AS1) [1]
HGNC ID HGNC:49446
Ensembl ID ENSG00000227811
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
KCNQ5 antisense RNA 1 (KCNQ5-AS1) [1]
HGNC ID HGNC:40323
Ensembl ID ENSG00000229154
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Long intergenic non-protein coding RNA 273 (LINC00273) [1]
HGNC ID HGNC:38595
Ensembl ID ENSG00000256642
Method RIP-seq logFC: 1.49E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Long intergenic non-protein coding RNA 385 (LINC00385) [1]
HGNC ID HGNC:42713
Ensembl ID ENSG00000232643
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Short non-coding
Micro RNA
In total 613 target gene(s)
MicroRNA 3648-1 (MIR3648-1) [1]
HGNC ID HGNC:38941
Ensembl ID ENSG00000275708
Method RIP-seq logFC: 2.45E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 3648-2 (MIR3648-2) [1]
HGNC ID HGNC:50843
Ensembl ID ENSG00000264462
Method RIP-seq logFC: 2.45E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 3651 (MIR3651) [1]
HGNC ID HGNC:38897
Ensembl ID ENSG00000281156
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 641 (MIR641) [1]
HGNC ID HGNC:32897
Ensembl ID ENSG00000207631
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 101-2 (MIR101-2) [1]
HGNC ID HGNC:31489
Ensembl ID ENSG00000199065
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 103a-2 (MIR103A2) [1]
HGNC ID HGNC:31491
Ensembl ID ENSG00000199024
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 103b-1 (MIR103B1) [1]
HGNC ID HGNC:35384
Ensembl ID ENSG00000283612
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 103b-2 (MIR103B2) [1]
HGNC ID HGNC:35385
Ensembl ID ENSG00000283320
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 106b (MIR106B) [1]
HGNC ID HGNC:31495
Ensembl ID ENSG00000208036
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 107 (MIR107) [1]
HGNC ID HGNC:31496
Ensembl ID ENSG00000198997
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Misc RNA
In total 3 target gene(s)
Ribonuclease P RNA component H1 (RPPH1) [1]
HGNC ID HGNC:19273
Ensembl ID ENSG00000277209
Method RIP-seq logFC: 5.86E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Telomerase RNA component (TERC) [1]
HGNC ID HGNC:11727
Ensembl ID ENSG00000270141
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA component of mitochondrial RNA processing endoribonuclease (RMRP) [1]
HGNC ID HGNC:10031
Ensembl ID ENSG00000277027
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Ribosomal RNA
In total 22 target gene(s)
Mitochondrially encoded 12S rRNA (MT-RNR1) [1]
HGNC ID HGNC:7470
Ensembl ID ENSG00000211459
Uniprot ID MOTSC_HUMAN
Method RIP-seq logFC: 2.49E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Mitochondrially encoded 16S rRNA (MT-RNR2) [1]
HGNC ID HGNC:7471
Ensembl ID ENSG00000210082
Uniprot ID HUNIN_HUMAN
Method RIP-seq logFC: 1.51E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 1 (RNA5S1) [1]
HGNC ID HGNC:34362
Ensembl ID ENSG00000199352
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 10 (RNA5S10) [1]
HGNC ID HGNC:34371
Ensembl ID ENSG00000199910
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 11 (RNA5S11) [1]
HGNC ID HGNC:34372
Ensembl ID ENSG00000199334
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 12 (RNA5S12) [1]
HGNC ID HGNC:34373
Ensembl ID ENSG00000199270
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 13 (RNA5S13) [1]
HGNC ID HGNC:34374
Ensembl ID ENSG00000202526
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 14 (RNA5S14) [1]
HGNC ID HGNC:34375
Ensembl ID ENSG00000201355
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 15 (RNA5S15) [1]
HGNC ID HGNC:34376
Ensembl ID ENSG00000201925
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, 5S ribosomal 16 (RNA5S16) [1]
HGNC ID HGNC:34377
Ensembl ID ENSG00000202257
Method RIP-seq logFC: 6.93E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Small nuclear RNA
In total 26 target gene(s)
RNA, U1 small nuclear 1 (RNU1-1) [1]
HGNC ID HGNC:10120
Ensembl ID ENSG00000206652
Method RIP-seq logFC: 5.11E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U1 small nuclear 2 (RNU1-2) [1]
HGNC ID HGNC:10123
Ensembl ID ENSG00000207005
Method RIP-seq logFC: 5.11E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U1 small nuclear 3 (RNU1-3) [1]
HGNC ID HGNC:10130
Ensembl ID ENSG00000207513
Method RIP-seq logFC: 5.11E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U1 small nuclear 4 (RNU1-4) [1]
HGNC ID HGNC:10128
Ensembl ID ENSG00000207389
Method RIP-seq logFC: 5.11E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U2 small nuclear 1 (RNU2-1) [1]
HGNC ID HGNC:10142
Ensembl ID ENSG00000274585
Method RIP-seq logFC: 3.80E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4 small nuclear 1 (RNU4-1) [1]
HGNC ID HGNC:10192
Ensembl ID ENSG00000200795
Method RIP-seq logFC: 5.99E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4 small nuclear 2 (RNU4-2) [1]
HGNC ID HGNC:10193
Ensembl ID ENSG00000202538
Method RIP-seq logFC: 6.69E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U4atac small nuclear (RNU4ATAC) [1]
HGNC ID HGNC:34016
Ensembl ID ENSG00000264229
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5A small nuclear 1 (RNU5A-1) [1]
HGNC ID HGNC:10211
Ensembl ID ENSG00000199568
Method RIP-seq logFC: 1.02E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, U5D small nuclear 1 (RNU5D-1) [1]
HGNC ID HGNC:10214
Ensembl ID ENSG00000200169
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Small nucleolar RNA
In total 301 target gene(s)
Small Cajal body-specific RNA 1 (SCARNA1) [1]
HGNC ID HGNC:32555
Ensembl ID ENSG00000252947
Method RIP-seq logFC: 1.03E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 10 (SCARNA10) [1]
HGNC ID HGNC:32567
Ensembl ID ENSG00000239002
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 12 (SCARNA12) [1]
HGNC ID HGNC:32569
Ensembl ID ENSG00000238795
Method RIP-seq logFC: 3.51E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 13 (SCARNA13) [1]
HGNC ID HGNC:32570
Ensembl ID ENSG00000252481
Method RIP-seq logFC: 1.59E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 16 (SCARNA16) [1]
HGNC ID HGNC:32573
Ensembl ID ENSG00000275143
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 21 (SCARNA21) [1]
HGNC ID HGNC:32579
Ensembl ID ENSG00000252835
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 22 (SCARNA22) [1]
HGNC ID HGNC:32580
Ensembl ID ENSG00000249784
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 4 (SCARNA4) [1]
HGNC ID HGNC:32560
Ensembl ID ENSG00000280466
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 5 (SCARNA5) [1]
HGNC ID HGNC:32561
Ensembl ID ENSG00000252010
Method RIP-seq logFC: 2.78E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small Cajal body-specific RNA 6 (SCARNA6) [1]
HGNC ID HGNC:32562
Ensembl ID ENSG00000251791
Method RIP-seq logFC: 1.96E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Vault RNA
In total 3 target gene(s)
Vault RNA 1-1 (VTRNA1-1) [1]
HGNC ID HGNC:12654
Ensembl ID ENSG00000199990
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Vault RNA 1-2 (VTRNA1-2) [1]
HGNC ID HGNC:12655
Ensembl ID ENSG00000202111
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Vault RNA 2-1 (VTRNA2-1) [1]
HGNC ID HGNC:37054
Ensembl ID ENSG00000270123
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Other
Endogenous retrovirus
In total 2 target gene(s)
Endogenous retrovirus group 48 member 1 (ERVH48-1) [1]
HGNC ID HGNC:17216
Ensembl ID ENSG00000233056
Uniprot ID SUPYN_HUMAN
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Endogenous retrovirus group K3 member 1 (ERVK3-1) [1]
HGNC ID HGNC:30466
Ensembl ID ENSG00000142396
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Protocadherin
In total 3 target gene(s)
Protocadherin gamma subfamily A, 8 (PCDHGA8) [1]
HGNC ID HGNC:8706
Ensembl ID ENSG00000253767
Uniprot ID PCDG8_HUMAN
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Protocadherin gamma subfamily C, 5 (PCDHGC5) [1]
HGNC ID HGNC:8718
Ensembl ID ENSG00000240764
Uniprot ID PCDGM_HUMAN
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Protocadherin beta 14 (PCDHB14) [2]
HGNC ID HGNC:8685
Ensembl ID ENSG00000120327
Uniprot ID PCDBE_HUMAN
Method RNA-seq GSE109604
Condition knock down
Evidence logFC: -0.843945562; p-value: 0.000384285
Cell Line ES-2 cell line Ovarian cancer Homo sapiens CVCL_3509
Click to Download All Target Gene of This Genetic Class
Readthrough
In total 41 target gene(s)
BCL2L2-PABPN1 readthrough (BCL2L2-PABPN1) [1]
HGNC ID HGNC:42959
Ensembl ID ENSG00000258643
Uniprot ID B2CL2_HUMAN
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
BIVM-ERCC5 readthrough (BIVM-ERCC5) [1]
HGNC ID HGNC:43690
Ensembl ID ENSG00000270181
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
BLOC1S5-TXNDC5 readthrough (NMD candidate) (BLOC1S5-TXNDC5) [1]
HGNC ID HGNC:42001
Ensembl ID ENSG00000259040
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
CHKB-CPT1B readthrough (NMD candidate) (CHKB-CPT1B) [1]
HGNC ID HGNC:41998
Ensembl ID ENSG00000254413
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
CHURC1-FNTB readthrough (CHURC1-FNTB) [1]
HGNC ID HGNC:42960
Ensembl ID ENSG00000125954
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
COMMD3-BMI1 readthrough (COMMD3-BMI1) [1]
HGNC ID HGNC:48326
Ensembl ID ENSG00000269897
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
EEF1E1-BLOC1S5 readthrough (NMD candidate) (EEF1E1-BLOC1S5) [1]
HGNC ID HGNC:49187
Ensembl ID ENSG00000265818
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
FMC1-LUC7L2 readthrough (C7orf55-LUC7L2) [1]
HGNC ID HGNC:44671
Ensembl ID ENSG00000269955
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
HNRNPUL2-BSCL2 readthrough (NMD candidate) (HNRNPUL2-BSCL2) [1]
HGNC ID HGNC:49189
Ensembl ID ENSG00000234857
Method RIP-seq logFC: 1.88E+00 GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
INMT-MINDY4 readthrough (NMD candidate) (INMT-FAM188B) [1]
HGNC ID HGNC:41995
Ensembl ID ENSG00000254959
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Unknown
In total 5 target gene(s)
Ribosomal protein SA pseudogene 58 (RPSAP58) [1]
HGNC ID HGNC:36809
Ensembl ID ENSG00000225178
Method RIP-seq logFC: Inf GSE90639
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Adhesion G protein-coupled receptor F2 (ADGRF2) [1]
HGNC ID HGNC:18991
Ensembl ID ENSG00000164393
Uniprot ID AGRF2_HUMAN
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Chromosome 1 putative open reading frame 220 (C1orf220) [1]
HGNC ID HGNC:33805
Ensembl ID ENSG00000213057
Uniprot ID CA220_HUMAN
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Long intergenic non-protein coding RNA 672 (LINC00672) [1]
HGNC ID HGNC:44353
Ensembl ID ENSG00000263874
Method eCLIP-seq GSE92220
Cell Line HEK293T Normal Homo sapiens CVCL_0063
FKBP prolyl isomerase family member 1C (FKBP1C) [2]
HGNC ID HGNC:21376
Ensembl ID ENSG00000198225
Method RNA-seq GSE109604
Condition knock down
Evidence logFC: 1.188706121; p-value: 2.11E-07
Cell Line ES-2 cell line Ovarian cancer Homo sapiens CVCL_3509
Click to Download All Target Gene of This Genetic Class
References
Ref 1 Recognition of RNA N(6)-methyladenosine by IGF2BP proteins enhances mRNA stability and translation. Nat Cell Biol. 2018 Mar;20(3):285-295. doi: 10.1038/s41556-018-0045-z. Epub 2018 Feb 23.
Ref 2 IGF2BP1 enhances an aggressive tumor cell phenotype by impairing miRNA-directed downregulation of oncogenic factors. Nucleic Acids Res. 2018 Jul 6;46(12):6285-6303.