m6A Target Genes of This Regulator

General Information of the m6A Regulator (ID: REG00008)
Regulator Name YTH domain-containing family protein 2 (YTHDF2)
Synonyms
DF2; CLL-associated antigen KW-14; High-glucose-regulated protein 8; Renal carcinoma antigen NY-REN-2; HGRG8
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Gene Name YTHDF2
Regulator Type ERASER READER WRITER
Regulator Link Click to View Full Information of This Regulator
Full List of Target Gene(s) of This m6A Regulator ( Full Data Download )
Protein coding
Gene with protein product
In total 6223 target gene(s)
2'-5'-oligoadenylate synthetase 2 (OAS2) [1]
HGNC ID HGNC:8087
Ensembl ID ENSG00000111335
Uniprot ID OAS2_HUMAN
Method RIP-seq logFC: 3.25E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
2-aminoethanethiol dioxygenase (ADO) [1]
HGNC ID HGNC:23506
Ensembl ID ENSG00000181915
Uniprot ID AEDO_HUMAN
Method RIP-seq logFC: 1.57E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
2-phosphoxylose phosphatase 1 (PXYLP1) [1]
HGNC ID HGNC:26303
Ensembl ID ENSG00000155893
Uniprot ID PXYP1_HUMAN
Method RIP-seq logFC: 1.54E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
3'(2'), 5'-bisphosphate nucleotidase 2 (IMPAD1) [1]
HGNC ID HGNC:26019
Ensembl ID ENSG00000104331
Uniprot ID IMPA3_HUMAN
Method RIP-seq logFC: 1.22E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
3-oxoacyl-ACP synthase, mitochondrial (OXSM) [1]
HGNC ID HGNC:26063
Ensembl ID ENSG00000151093
Uniprot ID OXSM_HUMAN
Method RIP-seq logFC: 1.93E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
5'-nucleotidase domain containing 3 (NT5DC3) [1]
HGNC ID HGNC:30826
Ensembl ID ENSG00000111696
Uniprot ID NT5D3_HUMAN
Method RIP-seq logFC: 1.67E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
5'-nucleotidase, cytosolic IA (NT5C1A) [1]
HGNC ID HGNC:17819
Ensembl ID ENSG00000116981
Uniprot ID 5NT1A_HUMAN
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
5-methyltetrahydrofolate-homocysteine methyltransferase (MTR) [1]
HGNC ID HGNC:7468
Ensembl ID ENSG00000116984
Uniprot ID METH_HUMAN
Method RIP-seq logFC: 1.54E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
A-kinase anchoring protein 1 (AKAP1) [1]
HGNC ID HGNC:367
Ensembl ID ENSG00000121057
Uniprot ID AKAP1_HUMAN
Method RIP-seq logFC: 1.59E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
A-kinase anchoring protein 10 (AKAP10) [1]
HGNC ID HGNC:368
Ensembl ID ENSG00000108599
Uniprot ID AKA10_HUMAN
Method RIP-seq logFC: 1.24E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Pseudogene
Immunoglobulin pseudogene
In total 1 target gene(s)
Immunoglobulin lambda variable 3-17 (pseudogene) (IGLV3-17) [3]
HGNC ID HGNC:5902
Ensembl ID ENSG00000253152
Method RNA-seq GSE107956
Condition knock down
Evidence logFC: 3.637982779; p-value: 0.027062155
Cell Line Human umbilical cord blood CD34+ cells Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Pseudogene
In total 422 target gene(s)
5-hydroxytryptamine receptor 7 pseudogene 1 (HTR7P1) [1]
HGNC ID HGNC:30411
Ensembl ID ENSG00000183935
Method RIP-seq logFC: 2.75E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Actin gamma 1 pseudogene 1 (ACTG1P1) [1]
HGNC ID HGNC:146
Ensembl ID ENSG00000178631
Method RIP-seq logFC: 3.55E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Actin gamma 1 pseudogene 20 (ACTG1P20) [1]
HGNC ID HGNC:51500
Ensembl ID ENSG00000241547
Method RIP-seq logFC: 1.80E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Actin gamma 1 pseudogene 24 (ACTG1P24) [1]
HGNC ID HGNC:49661
Ensembl ID ENSG00000226359
Method RIP-seq logFC: 1.50E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
actin gamma 1 pseudogene 25 (RP11-480I12.9) [1]
HGNC ID HGNC:54872
Ensembl ID ENSG00000234996
Method RIP-seq logFC: 1.30E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ADAM metallopeptidase domain 1A (pseudogene) (ADAM1A) [1]
HGNC ID HGNC:187
Ensembl ID ENSG00000229186
Method RIP-seq logFC: 2.17E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ADAM metallopeptidase domain 21 pseudogene 1 (ADAM21P1) [1]
HGNC ID HGNC:19822
Ensembl ID ENSG00000235812
Method RIP-seq logFC: 4.04E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Adenosylhomocysteinase pseudogene 2 (AHCYP2) [1]
HGNC ID HGNC:44994
Ensembl ID ENSG00000238181
Method RIP-seq logFC: 2.70E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Adenosylmethionine decarboxylase 1 pseudogene 3 (AMD1P3) [1]
HGNC ID HGNC:51608
Ensembl ID ENSG00000249286
Method RIP-seq logFC: 2.30E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Adenylate kinase 3 pseudogene 3 (AK3P3) [1]
HGNC ID HGNC:39062
Ensembl ID ENSG00000230042
Method RIP-seq logFC: 1.41E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
T cell receptor pseudogene
In total 1 target gene(s)
T cell receptor gamma variable 5P (pseudogene) (TRGV5P) [3]
HGNC ID HGNC:12291
Ensembl ID ENSG00000228668
Method RNA-seq GSE107956
Condition knock down
Evidence logFC: -0.667772383; p-value: 0.00497294
Cell Line Human umbilical cord blood CD34+ cells Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Long non-coding
Long non-coding RNA
In total 600 target gene(s)
A1BG antisense RNA 1 (A1BG-AS1) [1]
HGNC ID HGNC:37133
Ensembl ID ENSG00000268895
Method RIP-seq logFC: 1.65E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ABHD15 antisense RNA 1 (ABHD15-AS1) [1]
HGNC ID HGNC:49685
Ensembl ID ENSG00000264031
Method RIP-seq logFC: 1.21E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ACTA2 antisense RNA 1 (ACTA2-AS1) [1]
HGNC ID HGNC:45169
Ensembl ID ENSG00000180139
Method RIP-seq logFC: 1.24E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ACTN1 divergent transcript (ACTN1-AS1) [1]
HGNC ID HGNC:20131
Ensembl ID ENSG00000259062
Method RIP-seq logFC: 1.08E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
AFTPH divergent transcript (RP11-568N6.1) [1]
HGNC ID HGNC:52788
Ensembl ID ENSG00000260101
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Androgen receptor regulated long noncoding RNA 1 (PRCAT47) [1]
HGNC ID HGNC:53032
Ensembl ID ENSG00000260896
Method RIP-seq logFC: 1.39E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ANXA2R antisense RNA 1 (AC025171.1) [1]
HGNC ID HGNC:27208
Ensembl ID ENSG00000215068
Method RIP-seq logFC: 1.24E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
AP4B1 antisense RNA 1 (AP4B1-AS1) [1]
HGNC ID HGNC:44114
Ensembl ID ENSG00000226167
Method RIP-seq logFC: 1.32E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
APRG1 tumor suppressor candidate (C3orf35) [1]
HGNC ID HGNC:24082
Ensembl ID ENSG00000198590
Uniprot ID APRG1_HUMAN
Method RIP-seq logFC: 1.06E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
ARHGAP5 antisense RNA 1 (head to head) (ARHGAP5-AS1) [1]
HGNC ID HGNC:20279
Ensembl ID ENSG00000258655
Uniprot ID ARAS1_HUMAN
Method RIP-seq logFC: 1.19E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Short non-coding
Micro RNA
In total 111 target gene(s)
MicroRNA 125b-2 (MIR125B2) [2]
HGNC ID HGNC:31507
Ensembl ID ENSG00000207863
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 128-1 (MIR128-1) [2]
HGNC ID HGNC:31510
Ensembl ID ENSG00000207654
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 1306 (MIR1306) [2]
HGNC ID HGNC:35371
Ensembl ID ENSG00000284464
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 193a (MIR193A) [2]
HGNC ID HGNC:31563
Ensembl ID ENSG00000207614
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 197 (MIR197) [2]
HGNC ID HGNC:31569
Ensembl ID ENSG00000284443
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 1976 (MIR1976) [2]
HGNC ID HGNC:37064
Ensembl ID ENSG00000238705
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
microRNA 3064 (MIR3064) [2]
HGNC ID HGNC:41652
Ensembl ID ENSG00000284564
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 3145 (MIR3145) [2]
HGNC ID HGNC:38327
Ensembl ID ENSG00000266555
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 3162 (MIR3162) [2]
HGNC ID HGNC:38271
Ensembl ID ENSG00000264559
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
MicroRNA 331 (MIR331) [2]
HGNC ID HGNC:31772
Ensembl ID ENSG00000199172
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Misc RNA
In total 8 target gene(s)
Ribonuclease P RNA component H1 (RPPH1) [1]
HGNC ID HGNC:19273
Ensembl ID ENSG00000277209
Method RIP-seq logFC: 2.92E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA component of mitochondrial RNA processing endoribonuclease (RMRP) [1]
HGNC ID HGNC:10031
Ensembl ID ENSG00000277027
Method RIP-seq logFC: 2.36E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Telomerase RNA component (TERC) [2]
HGNC ID HGNC:11727
Ensembl ID ENSG00000270141
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Small NF90 (ILF3) associated RNA A1 (SNAR-A1) [1]
HGNC ID HGNC:34304
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Small NF90 (ILF3) associated RNA A7 (SNAR-A7) [1]
HGNC ID HGNC:34310
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Small NF90 (ILF3) associated RNA B1 (SNAR-B1) [1]
HGNC ID HGNC:34317
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Small NF90 (ILF3) associated RNA C4 (SNAR-C4) [1]
HGNC ID HGNC:34322
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Small NF90 (ILF3) associated RNA C5 (SNAR-C5) [1]
HGNC ID HGNC:34323
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Ribosomal RNA
In total 20 target gene(s)
RNA, 5S ribosomal 1 (RNA5S1) [1]
HGNC ID HGNC:34362
Ensembl ID ENSG00000199352
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 10 (RNA5S10) [1]
HGNC ID HGNC:34371
Ensembl ID ENSG00000199910
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 11 (RNA5S11) [1]
HGNC ID HGNC:34372
Ensembl ID ENSG00000199334
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 12 (RNA5S12) [1]
HGNC ID HGNC:34373
Ensembl ID ENSG00000199270
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 13 (RNA5S13) [1]
HGNC ID HGNC:34374
Ensembl ID ENSG00000202526
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 14 (RNA5S14) [1]
HGNC ID HGNC:34375
Ensembl ID ENSG00000201355
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 15 (RNA5S15) [1]
HGNC ID HGNC:34376
Ensembl ID ENSG00000201925
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 16 (RNA5S16) [1]
HGNC ID HGNC:34377
Ensembl ID ENSG00000202257
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 17 (RNA5S17) [1]
HGNC ID HGNC:34378
Ensembl ID ENSG00000200370
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, 5S ribosomal 2 (RNA5S2) [1]
HGNC ID HGNC:34363
Ensembl ID ENSG00000201588
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Small nuclear RNA
In total 25 target gene(s)
RNA, U1 small nuclear 1 (RNU1-1) [1]
HGNC ID HGNC:10120
Ensembl ID ENSG00000206652
Method RIP-seq logFC: 2.97E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U1 small nuclear 2 (RNU1-2) [1]
HGNC ID HGNC:10123
Ensembl ID ENSG00000207005
Method RIP-seq logFC: 2.97E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U1 small nuclear 3 (RNU1-3) [1]
HGNC ID HGNC:10130
Ensembl ID ENSG00000207513
Method RIP-seq logFC: 2.97E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U1 small nuclear 4 (RNU1-4) [1]
HGNC ID HGNC:10128
Ensembl ID ENSG00000207389
Method RIP-seq logFC: 2.97E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U12 small nuclear (RNU12) [1]
HGNC ID HGNC:19380
Ensembl ID ENSG00000276027
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U2 small nuclear 1 (RNU2-1) [1]
HGNC ID HGNC:10142
Ensembl ID ENSG00000274585
Method RIP-seq logFC: 5.03E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U4 small nuclear 1 (RNU4-1) [1]
HGNC ID HGNC:10192
Ensembl ID ENSG00000200795
Method RIP-seq logFC: 7.72E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U4 small nuclear 2 (RNU4-2) [1]
HGNC ID HGNC:10193
Ensembl ID ENSG00000202538
Method RIP-seq logFC: 6.41E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, U6atac small nuclear (RNU6ATAC) [1]
HGNC ID HGNC:34017
Ensembl ID ENSG00000221676
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RNA, variant U1 small nuclear 18 (RNVU1-18) [1]
HGNC ID HGNC:37496
Ensembl ID ENSG00000206737
Method RIP-seq logFC: 2.97E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Small nucleolar RNA
In total 148 target gene(s)
Small Cajal body-specific RNA 10 (SCARNA10) [1]
HGNC ID HGNC:32567
Ensembl ID ENSG00000239002
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 13 (SCARNA13) [1]
HGNC ID HGNC:32570
Ensembl ID ENSG00000252481
Method RIP-seq logFC: 3.04E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 14 (SCARNA14) [1]
HGNC ID HGNC:32571
Ensembl ID ENSG00000252712
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 16 (SCARNA16) [1]
HGNC ID HGNC:32573
Ensembl ID ENSG00000275143
Method RIP-seq logFC: 8.20E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 21 (SCARNA21) [1]
HGNC ID HGNC:32579
Ensembl ID ENSG00000252835
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 23 (SCARNA23) [1]
HGNC ID HGNC:32581
Ensembl ID ENSG00000251869
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 5 (SCARNA5) [1]
HGNC ID HGNC:32561
Ensembl ID ENSG00000252010
Method RIP-seq logFC: 2.33E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small Cajal body-specific RNA 6 (SCARNA6) [1]
HGNC ID HGNC:32562
Ensembl ID ENSG00000251791
Method RIP-seq logFC: 3.32E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small nucleolar RNA, C/D box 10 (SNORD10) [1]
HGNC ID HGNC:32706
Ensembl ID ENSG00000238917
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Small nucleolar RNA, C/D box 3A (SNORD3A) [1]
HGNC ID HGNC:33189
Ensembl ID ENSG00000263934
Method RIP-seq logFC: 3.11E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Transfer RNA
In total 1 target gene(s)
Mitochondrially encoded tRNA-Asp (GAU/C) (MT-TD) [4]
HGNC ID HGNC:7478
Ensembl ID ENSG00000210154
Method RNA-seq GSE142825
Condition knock down
Evidence logFC: 0.810332946; p-value: 0.03294667
Cell Line GSC11 Glioblastoma Homo sapiens CVCL_DR55
Click to Download All Target Gene of This Genetic Class
Vault RNA
In total 2 target gene(s)
Vault RNA 1-1 (VTRNA1-1) [2]
HGNC ID HGNC:12654
Ensembl ID ENSG00000199990
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Vault RNA 1-2 (VTRNA1-2) [2]
HGNC ID HGNC:12655
Ensembl ID ENSG00000202111
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Y RNA
In total 3 target gene(s)
RNA, Ro60-associated Y1 (RNY1) [2]
HGNC ID HGNC:10242
Ensembl ID ENSG00000201098
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, Ro60-associated Y4 (RNY4) [2]
HGNC ID HGNC:10244
Ensembl ID ENSG00000252316
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
RNA, Ro60-associated Y5 (RNY5) [2]
HGNC ID HGNC:10248
Method iCLIP-seq GSE78030
Cell Line HEK293T Normal Homo sapiens CVCL_0063
Click to Download All Target Gene of This Genetic Class
Other
Complex locus constituent
In total 4 target gene(s)
Protocadherin alpha 10 (PCDHA10) [1]
HGNC ID HGNC:8664
Ensembl ID ENSG00000250120
Uniprot ID PCDAA_HUMAN
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Protocadherin alpha 1 (PCDHA1) [4]
HGNC ID HGNC:8663
Ensembl ID ENSG00000204970
Uniprot ID PCDA1_HUMAN
Method RNA-seq GSE142825
Condition knock down
Evidence logFC: -1.500265679; p-value: 0.000606722
Cell Line GSC11 Glioblastoma Homo sapiens CVCL_DR55
Protocadherin alpha 11 (PCDHA11) [4]
HGNC ID HGNC:8665
Ensembl ID ENSG00000249158
Uniprot ID PCDAB_HUMAN
Method RNA-seq GSE142825
Condition knock down
Evidence logFC: -1.311839609; p-value: 0.001911005
Cell Line GSC11 Glioblastoma Homo sapiens CVCL_DR55
Protocadherin alpha 13 (PCDHA13) [4]
HGNC ID HGNC:8667
Ensembl ID ENSG00000239389
Uniprot ID PCDAD_HUMAN
Method RNA-seq GSE142825
Condition knock down
Evidence logFC: -0.904480329; p-value: 0.001875109
Cell Line GSC11 Glioblastoma Homo sapiens CVCL_DR55
Click to Download All Target Gene of This Genetic Class
Immunoglobulin gene
In total 1 target gene(s)
Immunoglobulin lambda variable 5-52 (IGLV5-52) [1]
HGNC ID HGNC:5926
Ensembl ID ENSG00000211643
Uniprot ID LV552_HUMAN
Method RIP-seq logFC: 2.01E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
Protocadherin
In total 23 target gene(s)
Protocadherin beta 11 (PCDHB11) [1]
HGNC ID HGNC:8682
Ensembl ID ENSG00000197479
Uniprot ID PCDBB_HUMAN
Method RIP-seq logFC: 1.91E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 12 (PCDHB12) [1]
HGNC ID HGNC:8683
Ensembl ID ENSG00000120328
Uniprot ID PCDBC_HUMAN
Method RIP-seq logFC: 2.02E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 13 (PCDHB13) [1]
HGNC ID HGNC:8684
Ensembl ID ENSG00000187372
Uniprot ID PCDBD_HUMAN
Method RIP-seq logFC: 1.36E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 14 (PCDHB14) [1]
HGNC ID HGNC:8685
Ensembl ID ENSG00000120327
Uniprot ID PCDBE_HUMAN
Method RIP-seq logFC: 2.60E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 15 (PCDHB15) [1]
HGNC ID HGNC:8686
Ensembl ID ENSG00000113248
Uniprot ID PCDBF_HUMAN
Method RIP-seq logFC: 2.98E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 16 (PCDHB16) [1]
HGNC ID HGNC:14546
Ensembl ID ENSG00000272674
Uniprot ID PCDBG_HUMAN
Method RIP-seq logFC: 1.22E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 3 (PCDHB3) [1]
HGNC ID HGNC:8688
Ensembl ID ENSG00000113205
Uniprot ID PCDB3_HUMAN
Method RIP-seq logFC: 2.70E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 5 (PCDHB5) [1]
HGNC ID HGNC:8690
Ensembl ID ENSG00000113209
Uniprot ID PCDB5_HUMAN
Method RIP-seq logFC: 2.00E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 7 (PCDHB7) [1]
HGNC ID HGNC:8692
Ensembl ID ENSG00000113212
Uniprot ID PCDB7_HUMAN
Method RIP-seq logFC: 1.12E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Protocadherin beta 8 (PCDHB8) [1]
HGNC ID HGNC:8693
Ensembl ID ENSG00000120322
Uniprot ID PCDB8_HUMAN
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
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Readthrough
In total 40 target gene(s)
BIVM-ERCC5 readthrough (BIVM-ERCC5) [1]
HGNC ID HGNC:43690
Ensembl ID ENSG00000270181
Method RIP-seq logFC: 1.67E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
C8orf44-SGK3 readthrough (C8orf44-SGK3) [1]
HGNC ID HGNC:48354
Ensembl ID ENSG00000288602
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
CCDC169-SOHLH2 readthrough (CCDC169-SOHLH2) [1]
HGNC ID HGNC:38866
Ensembl ID ENSG00000250709
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
GPR75-ASB3 readthrough (GPR75-ASB3) [1]
HGNC ID HGNC:40043
Ensembl ID ENSG00000270898
Method RIP-seq logFC: 1.54E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
POC1B-GALNT4 readthrough (POC1B-GALNT4) [1]
HGNC ID HGNC:42957
Ensembl ID ENSG00000259075
Method RIP-seq logFC: 3.05E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
RPL36A-HNRNPH2 readthrough (RPL36A-HNRNPH2) [1]
HGNC ID HGNC:48349
Ensembl ID ENSG00000257529
Method RIP-seq logFC: 4.43E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
STON1-GTF2A1L readthrough (STON1-GTF2A1L) [1]
HGNC ID HGNC:30651
Ensembl ID ENSG00000068781
Method RIP-seq logFC: Inf GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
STX16-NPEPL1 readthrough (NMD candidate) (STX16-NPEPL1) [1]
HGNC ID HGNC:41993
Ensembl ID ENSG00000254995
Method RIP-seq logFC: 3.48E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
TGIF2-RAB5IF readthrough (TGIF2-C20orf24) [1]
HGNC ID HGNC:44664
Ensembl ID ENSG00000259399
Method RIP-seq logFC: 1.37E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
TLCD4-RWDD3 readthrough (TMEM56-RWDD3) [1]
HGNC ID HGNC:49388
Ensembl ID ENSG00000271092
Method RIP-seq logFC: 3.48E+00 GSE49339
Cell Line Hela Cervical cancer Homo sapiens CVCL_0030
Click to Download All Target Gene of This Genetic Class
T cell receptor gene
In total 3 target gene(s)
T cell receptor alpha constant (TRAC) [4]
HGNC ID HGNC:12029
Ensembl ID ENSG00000277734
Uniprot ID TRAC_HUMAN
Method RNA-seq GSE142825
Condition knock down
Evidence logFC: -0.806190851; p-value: 0.043518948
Cell Line GSC11 Glioblastoma Homo sapiens CVCL_DR55
T cell receptor delta constant (TRDC) [3]
HGNC ID HGNC:12253
Ensembl ID ENSG00000211829
Uniprot ID TRDC_HUMAN
Method RNA-seq GSE107956
Condition knock down
Evidence logFC: 0.85779014; p-value: 0.003252794
Cell Line Human umbilical cord blood CD34+ cells Healthy Homo sapiens .
T cell receptor gamma variable 5 (TRGV5) [3]
HGNC ID HGNC:12290
Ensembl ID ENSG00000211697
Uniprot ID TRGV5_HUMAN
Method RNA-seq GSE107956
Condition knock down
Evidence logFC: 1.01217248; p-value: 0.039203352
Cell Line Human umbilical cord blood CD34+ cells Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
Unknown
In total 2 target gene(s)
Ribosomal protein SA pseudogene 58 (RPSAP58) [1]
HGNC ID HGNC:36809
Ensembl ID ENSG00000225178
Method PARCLIP-seq GSE49339
Cell Line HeLa Cervical cancer Homo sapiens CVCL_0030
Zinc finger protein 883 (ZNF883) [3]
HGNC ID HGNC:27271
Ensembl ID ENSG00000228623
Uniprot ID ZN883_HUMAN
Method RNA-seq GSE107956
Condition knock down
Evidence logFC: 4.664493734; p-value: 0.042627472
Cell Line Human umbilical cord blood CD34+ cells Healthy Homo sapiens .
Click to Download All Target Gene of This Genetic Class
References
Ref 1 N6-methyladenosine-dependent regulation of messenger RNA stability. Nature. 2014 Jan 2;505(7481):117-20. doi: 10.1038/nature12730. Epub 2013 Nov 27.
Ref 2 m(6)A RNA methylation promotes XIST-mediated transcriptional repression. Nature. 2016 Sep 15;537(7620):369-373. doi: 10.1038/nature19342. Epub 2016 Sep 7.
Ref 3 Suppression of m(6)A reader Ythdf2 promotes hematopoietic stem cell expansion. Cell Res. 2018 Sep;28(9):904-917. doi: 10.1038/s41422-018-0072-0. Epub 2018 Jul 31.
Ref 4 EGFR/SRC/ERK-stabilized YTHDF2 promotes cholesterol dysregulation and invasive growth of glioblastoma. Nat Commun. 2021 Jan 8;12(1):177. doi: 10.1038/s41467-020-20379-7.