m6A Target Genes of This Regulator
General Information of the m6A Regulator (ID: REG00004)
Regulator Name | Heterogeneous nuclear ribonucleoproteins A2/B1 (HNRNPA2B1) | ||||
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Synonyms |
hnRNP A2/B1; HNRPA2B1
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Gene Name | HNRNPA2B1 | ||||
Regulator Type | ERASER READER WRITER | ||||
Regulator Link | Click to View Full Information of This Regulator |
Full List of Target Gene(s) of This m6A Regulator
(
Full Data Download
)
Protein coding
Gene with protein product
In total 2185 target gene(s) | ||||
ABL proto-oncogene 1, non-receptor tyrosine kinase (ABL1) | [1] | |||
HGNC ID | HGNC:76 | |||
Ensembl ID | ENSG00000097007 | |||
Uniprot ID | ABL1_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
ADP ribosylation factor interacting protein 2 (ARFIP2) | [1] | |||
HGNC ID | HGNC:17160 | |||
Ensembl ID | ENSG00000132254 | |||
Uniprot ID | ARFP2_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
CDC42 effector protein 3 (CDC42EP3) | [1] | |||
HGNC ID | HGNC:16943 | |||
Ensembl ID | ENSG00000163171 | |||
Uniprot ID | BORG2_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
DExH-box helicase 9 (DHX9) | [1] | |||
HGNC ID | HGNC:2750 | |||
Ensembl ID | ENSG00000135829 | |||
Uniprot ID | DHX9_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Dual specificity phosphatase 4 (DUSP4) | [1] | |||
HGNC ID | HGNC:3070 | |||
Ensembl ID | ENSG00000120875 | |||
Uniprot ID | DUS4_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Exostosin glycosyltransferase 1 (EXT1) | [1] | |||
HGNC ID | HGNC:3512 | |||
Ensembl ID | ENSG00000182197 | |||
Uniprot ID | EXT1_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
GRAM domain containing 2A (GRAMD2) | [1] | |||
HGNC ID | HGNC:27287 | |||
Ensembl ID | ENSG00000175318 | |||
Uniprot ID | GRM2A_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Growth differentiation factor 15 (GDF15) | [1] | |||
HGNC ID | HGNC:30142 | |||
Ensembl ID | ENSG00000130513 | |||
Uniprot ID | GDF15_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Kruppel like factor 7 (KLF7) | [1] | |||
HGNC ID | HGNC:6350 | |||
Ensembl ID | ENSG00000118263 | |||
Uniprot ID | KLF7_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
L-2-hydroxyglutarate dehydrogenase (L2HGDH) | [1] | |||
HGNC ID | HGNC:20499 | |||
Ensembl ID | ENSG00000087299 | |||
Uniprot ID | L2HDH_HUMAN | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Click to Download All Target Gene of This Genetic Class | ||||
Pseudogene
Pseudogene
In total 66 target gene(s) | ||||
Peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1 (PIN4P1) | [1] | |||
HGNC ID | HGNC:44193 | |||
Ensembl ID | ENSG00000227973 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Ribosomal protein L23a pseudogene 64 (RPL23AP64) | [1] | |||
HGNC ID | HGNC:36552 | |||
Ensembl ID | ENSG00000240970 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
ZKSCAN8 pseudogene 1 (ZNF192P1) | [1] | |||
HGNC ID | HGNC:18777 | |||
Ensembl ID | ENSG00000226314 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
ADCY10 pseudogene 1 (ADCY10P1) | [1] | |||
HGNC ID | HGNC:44143 | |||
Ensembl ID | ENSG00000161912 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 2.209512118; p-value: 0.001755154 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
ADP ribosylation factor like GTPase 4A pseudogene 2 (ARL4AP2) | [2] | |||
HGNC ID | HGNC:32379 | |||
Ensembl ID | ENSG00000248780 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 2.430454361; p-value: 6.41E-05 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Alpha-2-macroglobulin pseudogene 1 (A2MP1) | [1] | |||
HGNC ID | HGNC:8 | |||
Ensembl ID | ENSG00000256069 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.760634513; p-value: 9.58E-07 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Ankyrin repeat domain 36B pseudogene 2 (ANKRD36BP2) | [1] | |||
HGNC ID | HGNC:33607 | |||
Ensembl ID | ENSG00000230006 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.655584926; p-value: 0.032761656 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Arylacetamide deacetylase pseudogene 1 (AADACP1) | [1] | |||
HGNC ID | HGNC:50305 | |||
Ensembl ID | ENSG00000240602 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.099986314; p-value: 4.94E-08 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
ATP synthase peripheral stalk subunit d pseudogene 4 (ATP5PDP4) | [2] | |||
HGNC ID | HGNC:49626 | |||
Ensembl ID | ENSG00000234925 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 0.989799098; p-value: 6.03E-28 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Cadherin 12 pseudogene 3 (CDH12P3) | [2] | |||
HGNC ID | HGNC:37699 | |||
Ensembl ID | ENSG00000253492 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 0.868778173; p-value: 3.79E-07 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Click to Download All Target Gene of This Genetic Class | ||||
Long non-coding
Long non-coding RNA
In total 88 target gene(s) | ||||
JPX transcript, XIST activator (JPX) | [1] | |||
HGNC ID | HGNC:37191 | |||
Ensembl ID | ENSG00000225470 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Metastasis associated lung adenocarcinoma transcript 1 (MALAT1) | [1] | |||
HGNC ID | HGNC:29665 | |||
Ensembl ID | ENSG00000251562 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Nuclear paraspeckle assembly transcript 1 (NEAT1) | [1] | |||
HGNC ID | HGNC:30815 | |||
Ensembl ID | ENSG00000245532 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
RNA component of 7SK nuclear ribonucleoprotein (RN7SK) | [1] | |||
HGNC ID | HGNC:10037 | |||
Ensembl ID | ENSG00000283293 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
AGAP2 antisense RNA 1 (AGAP2-AS1) | [1] | |||
HGNC ID | HGNC:48633 | |||
Ensembl ID | ENSG00000255737 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 4.89943561; p-value: 0.010594989 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
ALOX12 antisense RNA 1 (ALOX12-AS1) | [1] | |||
HGNC ID | HGNC:51342 | |||
Ensembl ID | ENSG00000215067 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.847990098; p-value: 1.88E-13 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
ANKRD34C antisense RNA 1 (ANKRD34C-AS1) | [1] | |||
HGNC ID | HGNC:48618 | |||
Ensembl ID | ENSG00000259234 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 1.051406053; p-value: 0.049500356 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
APCDD1L divergent transcript (APCDD1L-DT) | [1] | |||
HGNC ID | HGNC:27152 | |||
Ensembl ID | ENSG00000231290 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.759016666; p-value: 0.029401829 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
ARHGAP29 antisense RNA 1 (ARHGAP29-AS1) | [2] | |||
HGNC ID | HGNC:54311 | |||
Ensembl ID | ENSG00000226835 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -0.748638935; p-value: 0.045470965 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
ATP2B1 antisense RNA 1 (ATP2B1-AS1) | [1] | |||
HGNC ID | HGNC:27883 | |||
Ensembl ID | ENSG00000271614 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -2.652423352; p-value: 4.65E-36 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Click to Download All Target Gene of This Genetic Class | ||||
Short non-coding
Micro RNA
In total 71 target gene(s) | ||||
MicroRNA 138-1 (MIR138-1) | [1] | |||
HGNC ID | HGNC:31524 | |||
Ensembl ID | ENSG00000207954 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 548aq (MIR548AQ) | [1] | |||
HGNC ID | HGNC:43488 | |||
Ensembl ID | ENSG00000265470 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
microRNA 612 (MIR612) | [1] | |||
HGNC ID | HGNC:32868 | |||
Ensembl ID | ENSG00000283791 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 625 (MIR625) | [1] | |||
HGNC ID | HGNC:32881 | |||
Ensembl ID | ENSG00000207781 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 100 (MIR100) | [1] | |||
HGNC ID | HGNC:31487 | |||
Ensembl ID | ENSG00000207994 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.738016682; p-value: 0.01031467 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 106b (MIR106B) | [1] | |||
HGNC ID | HGNC:31495 | |||
Ensembl ID | ENSG00000208036 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.621227014; p-value: 0.013893096 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 1181 (MIR1181) | [1] | |||
HGNC ID | HGNC:35262 | |||
Ensembl ID | ENSG00000284268 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.315653949; p-value: 0.037243355 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
MicroRNA 1207 (MIR1207) | [1] | |||
HGNC ID | HGNC:35273 | |||
Ensembl ID | ENSG00000221176 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 1.708093444; p-value: 0.001899536 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 1208 (MIR1208) | [1] | |||
HGNC ID | HGNC:35274 | |||
Ensembl ID | ENSG00000221261 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 1.045397708; p-value: 0.000901002 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
MicroRNA 1229 (MIR1229) | [1] | |||
HGNC ID | HGNC:33924 | |||
Ensembl ID | ENSG00000221394 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.855619414; p-value: 0.000262099 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Click to Download All Target Gene of This Genetic Class | ||||
Small nuclear RNA
In total 2 target gene(s) | ||||
RNA, U11 small nuclear (RNU11) | [1] | |||
HGNC ID | HGNC:10108 | |||
Ensembl ID | ENSG00000274978 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -2.364996892; p-value: 2.31E-06 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
RNA, U5E small nuclear 1 (RNU5E-1) | [2] | |||
HGNC ID | HGNC:10215 | |||
Ensembl ID | ENSG00000199347 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 1.65576686; p-value: 0.001075923 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Click to Download All Target Gene of This Genetic Class | ||||
Small nucleolar RNA
In total 41 target gene(s) | ||||
Small nucleolar RNA, C/D box 17 (SNORD17) | [1] | |||
HGNC ID | HGNC:32713 | |||
Ensembl ID | ENSG00000212232 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Small nucleolar RNA, H/ACA box 74A (SNORA74A) | [1] | |||
HGNC ID | HGNC:10119 | |||
Ensembl ID | ENSG00000200959 | |||
Method | HITS-CLIP | GSE70061 | ||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Small Cajal body-specific RNA 18 (SCARNA18) | [1] | |||
HGNC ID | HGNC:32559 | |||
Ensembl ID | ENSG00000238835 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 1.381348778; p-value: 0.004047509 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Small nucleolar RNA, C/D box 105 (SNORD105) | [1] | |||
HGNC ID | HGNC:32769 | |||
Ensembl ID | ENSG00000209645 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.898406995; p-value: 0.005875813 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Small nucleolar RNA, C/D box 111B (SNORD111B) | [1] | |||
HGNC ID | HGNC:33579 | |||
Ensembl ID | ENSG00000221514 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.002756418; p-value: 0.00943882 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Small nucleolar RNA, C/D box 113-9 (SNORD113-9) | [1] | |||
HGNC ID | HGNC:32988 | |||
Ensembl ID | ENSG00000201950 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.490516315; p-value: 0.00056842 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Small nucleolar RNA, C/D box 114-3 (SNORD114-3) | [1] | |||
HGNC ID | HGNC:32991 | |||
Ensembl ID | ENSG00000201839 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.000497617; p-value: 0.0064999 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Small nucleolar RNA, C/D box 115-3 (SNORD115-3) | [1] | |||
HGNC ID | HGNC:33022 | |||
Ensembl ID | ENSG00000199970 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.98856082; p-value: 0.00211031 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Small nucleolar RNA, C/D box 115-35 (SNORD115-35) | [1] | |||
HGNC ID | HGNC:33054 | |||
Ensembl ID | ENSG00000201992 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.015464972; p-value: 0.018376059 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Small nucleolar RNA, C/D box 115-4 (SNORD115-4) | [1] | |||
HGNC ID | HGNC:33023 | |||
Ensembl ID | ENSG00000200680 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.617140226; p-value: 0.003143225 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Click to Download All Target Gene of This Genetic Class | ||||
Other
Complex locus constituent
In total 1 target gene(s) | ||||
Protocadherin alpha 10 (PCDHA10) | [1] | |||
HGNC ID | HGNC:8664 | |||
Ensembl ID | ENSG00000250120 | |||
Uniprot ID | PCDAA_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.961939272; p-value: 0.006735786 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Click to Download All Target Gene of This Genetic Class | ||||
Immunoglobulin gene
In total 7 target gene(s) | ||||
Immunoglobulin heavy diversity 3-10 (IGHD3-10) | [2] | |||
HGNC ID | HGNC:5495 | |||
Ensembl ID | ENSG00000211923 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -3.796887414; p-value: 0.046723271 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Immunoglobulin heavy diversity 4-11 (non-functional) (IGHD4-11) | [2] | |||
HGNC ID | HGNC:5502 | |||
Ensembl ID | ENSG00000232543 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -1.126071539; p-value: 0.046569799 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Immunoglobulin heavy diversity 5-24 (non-functional) (IGHD5-24) | [2] | |||
HGNC ID | HGNC:5510 | |||
Ensembl ID | ENSG00000211909 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -0.91289799; p-value: 0.027350446 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Immunoglobulin heavy variable 3-11 (IGHV3-11) | [2] | |||
HGNC ID | HGNC:5580 | |||
Ensembl ID | ENSG00000211941 | |||
Uniprot ID | HV311_HUMAN | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -2.981083713; p-value: 0.023333059 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Immunoglobulin heavy variable 3-21 (IGHV3-21) | [2] | |||
HGNC ID | HGNC:5586 | |||
Ensembl ID | ENSG00000211947 | |||
Uniprot ID | HV321_HUMAN | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 2.560266113; p-value: 0.031224052 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Immunoglobulin kappa variable 3-15 (IGKV3-15) | [2] | |||
HGNC ID | HGNC:5816 | |||
Ensembl ID | ENSG00000244437 | |||
Uniprot ID | KV315_HUMAN | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -1.729320734; p-value: 0.026454401 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Immunoglobulin lambda variable 3-25 (IGLV3-25) | [2] | |||
HGNC ID | HGNC:5908 | |||
Ensembl ID | ENSG00000211659 | |||
Uniprot ID | LV325_HUMAN | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 2.434435938; p-value: 0.048200457 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Click to Download All Target Gene of This Genetic Class | ||||
Protocadherin
In total 6 target gene(s) | ||||
Protocadherin beta 12 (PCDHB12) | [1] | |||
HGNC ID | HGNC:8683 | |||
Ensembl ID | ENSG00000120328 | |||
Uniprot ID | PCDBC_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.717727798; p-value: 0.025622738 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Protocadherin beta 13 (PCDHB13) | [1] | |||
HGNC ID | HGNC:8684 | |||
Ensembl ID | ENSG00000187372 | |||
Uniprot ID | PCDBD_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.926593134; p-value: 0.005693284 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Protocadherin beta 14 (PCDHB14) | [1] | |||
HGNC ID | HGNC:8685 | |||
Ensembl ID | ENSG00000120327 | |||
Uniprot ID | PCDBE_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.602033573; p-value: 0.008314808 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Protocadherin beta 8 (PCDHB8) | [1] | |||
HGNC ID | HGNC:8693 | |||
Ensembl ID | ENSG00000120322 | |||
Uniprot ID | PCDB8_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.331037761; p-value: 0.006868224 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Protocadherin gamma subfamily A, 11 (PCDHGA11) | [1] | |||
HGNC ID | HGNC:8698 | |||
Ensembl ID | ENSG00000253873 | |||
Uniprot ID | PCDGB_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.175281538; p-value: 0.001976216 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Protocadherin gamma subfamily A, 12 (PCDHGA12) | [1] | |||
HGNC ID | HGNC:8699 | |||
Ensembl ID | ENSG00000253159 | |||
Uniprot ID | PCDGC_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.676979202; p-value: 0.001969412 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
Click to Download All Target Gene of This Genetic Class | ||||
Readthrough
In total 7 target gene(s) | ||||
C8orf44-SGK3 readthrough (C8orf44-SGK3) | [1] | |||
HGNC ID | HGNC:48354 | |||
Ensembl ID | ENSG00000288602 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -0.835578911; p-value: 3.01E-07 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
CHKB-CPT1B readthrough (NMD candidate) (CHKB-CPT1B) | [1] | |||
HGNC ID | HGNC:41998 | |||
Ensembl ID | ENSG00000254413 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.78904054; p-value: 0.015582318 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
GCOM1, MYZAP-POLR2M combined locus (GCOM1) | [1] | |||
HGNC ID | HGNC:26424 | |||
Ensembl ID | ENSG00000137878 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: -1.036350187; p-value: 0.03792225 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
NT5C1B-RDH14 readthrough (NT5C1B-RDH14) | [1] | |||
HGNC ID | HGNC:38831 | |||
Ensembl ID | ENSG00000250741 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.787699918; p-value: 0.001417318 | |||
Cell Line | MDA-MB-231 | Breast cancer | Homo sapiens | CVCL_0062 |
RNASEK-C17orf49 readthrough (RNASEK-C17orf49) | [1] | |||
HGNC ID | HGNC:44419 | |||
Ensembl ID | ENSG00000161939 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.763317917; p-value: 0.015112968 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
RNF103-CHMP3 readthrough (RNF103-CHMP3) | [1] | |||
HGNC ID | HGNC:38847 | |||
Ensembl ID | ENSG00000249884 | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 0.937129482; p-value: 0.0110568 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
ZHX1-C8orf76 readthrough (ZHX1-C8orf76) | [1] | |||
HGNC ID | HGNC:42975 | |||
Ensembl ID | ENSG00000259305 | |||
Uniprot ID | ZHX1R_HUMAN | |||
Method | RNA-seq | GSE70061 | ||
Condition | knock down | |||
Evidence | logFC: 1.962213332; p-value: 7.16E-22 | |||
Cell Line | HeLa cell line | Cervical cancer | Homo sapiens | CVCL_0030 |
Click to Download All Target Gene of This Genetic Class | ||||
T cell receptor gene
In total 3 target gene(s) | ||||
T cell receptor alpha joining 10 (TRAJ10) | [2] | |||
HGNC ID | HGNC:12038 | |||
Ensembl ID | ENSG00000211879 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 0.840213932; p-value: 0.005549785 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
T cell receptor alpha joining 18 (TRAJ18) | [2] | |||
HGNC ID | HGNC:12046 | |||
Ensembl ID | ENSG00000211871 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: -0.828229099; p-value: 0.015921261 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
T cell receptor alpha joining 23 (TRAJ23) | [2] | |||
HGNC ID | HGNC:12052 | |||
Ensembl ID | ENSG00000211866 | |||
Method | RNA-seq | GSE52834 | ||
Condition | knock down | |||
Evidence | logFC: 0.738948581; p-value: 0.039483854 | |||
Cell Line | GM19238 | Healthy | Homo sapiens | . |
Click to Download All Target Gene of This Genetic Class | ||||