General Information of the m6A Target Gene (ID: M6ATAR01742)
Target Name E3 ubiquitin-protein ligase synoviolin (SYVN1)
Synonyms
EC 2.3.2.27; RING-type E3 ubiquitin transferase synoviolin; Synovial apoptosis inhibitor 1
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Gene Name SYVN1
Chromosomal Location 11q13.1
Family HRD1 family
Function
E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation (PubMed:12459480, PubMed:12646171, PubMed:12975321, PubMed:14593114, PubMed:16289116, PubMed:16847254, PubMed:17059562, PubMed:17141218, PubMed:17170702, PubMed:22607976, PubMed:26471130, PubMed:28827405). Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins (PubMed:12459480, PubMed:12646171, PubMed:12975321, PubMed:14593114, PubMed:16289116, PubMed:16847254, PubMed:17059562, PubMed:17141218, PubMed:17170702, PubMed:22607976, PubMed:26471130, PubMed:28842558). Also promotes the degradation of normal but naturally short-lived proteins such as SGK. Protects cells from ER stress-induced apoptosis. Protects neurons from apoptosis induced by polyglutamine-expanded huntingtin (HTT) or unfolded GPR37 by promoting their degradation (PubMed:17141218). Sequesters p53/TP53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis (PubMed:17170702). Mediates the ubiquitination and subsequent degradation of cytoplasmic NFE2L1 (By similarity). During the early stage of B cell development, required for degradation of the pre-B cell receptor (pre-BCR) complex, hence supporting further differentiation into mature B cells (By similarity).
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Gene ID 84447
Uniprot ID
SYVN1_HUMAN
HGNC ID
HGNC:20738
KEGG ID
hsa:84447
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05210
Epigenetic Regulator Small nucleolar RNA host gene 29 (SNHG29)
Regulated Target Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1)
Crosstalk relationship ncRNA → m6A
Disease Cervical cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01742)
E3 ubiquitin-protein ligase synoviolin (SYVN1)
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE004856 Click to Show/Hide the Full List
mod site chr11:65128918-65128919:- [2]
Sequence TCCCTGCCTGCAAGCACCTTACAGCTAAGGGATAGAATCAT
Transcript ID List ENST00000527765.1; ENST00000294256.12; ENST00000377190.7; ENST00000307289.10; ENST00000530451.1; ENST00000449943.5; ENST00000526060.5
External Link RMBase: RNA-editing_site_22536
5-methylcytidine (m5C)
In total 3 m6A sequence/site(s) in this target gene
mod ID: M5CSITE005207 Click to Show/Hide the Full List
mod site chr11:65122105-65122106:- [3]
Sequence CGACTCCATCTTCGCGGTAGCTGGGACCGCCGTTCAGGTAA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000526555.5; ENST00000279259.7; ENST00000434372.2; ENST00000530451.1; ENST00000529639.6; ENST00000531357.1; ENST00000527548.5
External Link RMBase: m5C_site_7837
mod ID: M5CSITE005208 Click to Show/Hide the Full List
mod site chr11:65122111-65122112:- [3]
Sequence CTTTCTCGACTCCATCTTCGCGGTAGCTGGGACCGCCGTTC
Seq Type List Bisulfite-seq
Transcript ID List ENST00000279259.7; ENST00000529639.6; ENST00000531357.1; ENST00000526555.5; ENST00000434372.2; ENST00000527548.5; ENST00000530451.1
External Link RMBase: m5C_site_7838
mod ID: M5CSITE005209 Click to Show/Hide the Full List
mod site chr11:65127761-65127762:- [3]
Sequence GGCGGGCAGCACTGAGGGACCCTGCCCCGCCCCTCCCCCCA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000377190.7; ENST00000307289.10; ENST00000449943.5; ENST00000530451.1; ENST00000526060.5; ENST00000294256.12
External Link RMBase: m5C_site_7840
N6-methyladenosine (m6A)
In total 39 m6A sequence/site(s) in this target gene
mod ID: M6ASITE006637 Click to Show/Hide the Full List
mod site chr11:65121783-65121784:- [4]
Sequence TTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGG
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000525297.5; ENST00000531357.1; ENST00000529639.6; ENST00000529259.1; ENST00000279259.7; ENST00000526555.5; ENST00000527548.5; ENST00000531743.5; ENST00000530451.1; ENST00000434372.2
External Link RMBase: m6A_site_147282
mod ID: M6ASITE006638 Click to Show/Hide the Full List
mod site chr11:65121898-65121899:- [5]
Sequence CCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; H1B; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531743.5; ENST00000529639.6; ENST00000529259.1; ENST00000527548.5; ENST00000530451.1; ENST00000531357.1; ENST00000526555.5; ENST00000434372.2; ENST00000279259.7
External Link RMBase: m6A_site_147283
mod ID: M6ASITE006639 Click to Show/Hide the Full List
mod site chr11:65121967-65121968:- [5]
Sequence CTGCTCCAGTCCCTATCCGAACTCCTTGGGAGGCCTGGCCT
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; A549; Jurkat; peripheral-blood; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530451.1; ENST00000434372.2; ENST00000531357.1; ENST00000531743.5; ENST00000279259.7; ENST00000526555.5; ENST00000527548.5; ENST00000529639.6
External Link RMBase: m6A_site_147284
mod ID: M6ASITE006640 Click to Show/Hide the Full List
mod site chr11:65122015-65122016:- [5]
Sequence GGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; Jurkat; peripheral-blood; HEK293T
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000434372.2; ENST00000526555.5; ENST00000529639.6; ENST00000530451.1; ENST00000531743.5; ENST00000527548.5; ENST00000531357.1; ENST00000279259.7
External Link RMBase: m6A_site_147285
mod ID: M6ASITE006641 Click to Show/Hide the Full List
mod site chr11:65122100-65122101:- [5]
Sequence CCATCTTCGCGGTAGCTGGGACCGCCGTTCAGGTAAGAATG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; A549; HEK293T; H1A; H1B; fibroblasts; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000434372.2; ENST00000529639.6; ENST00000530451.1; ENST00000526555.5; ENST00000531357.1; ENST00000527548.5; ENST00000279259.7
External Link RMBase: m6A_site_147286
mod ID: M6ASITE006642 Click to Show/Hide the Full List
mod site chr11:65122175-65122176:- [4]
Sequence GGTCGCTCAGCAGTGACGTGACACGCAGCCCACGGTCTGTA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000434372.2; ENST00000530451.1
External Link RMBase: m6A_site_147287
mod ID: M6ASITE006643 Click to Show/Hide the Full List
mod site chr11:65122202-65122203:- [5]
Sequence GGCGGTACAAATAGCAGGGAACCGCGCGGTCGCTCAGCAGT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; H1A; H1B; HEK293T; fibroblasts; A549; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530451.1
External Link RMBase: m6A_site_147288
mod ID: M6ASITE006644 Click to Show/Hide the Full List
mod site chr11:65122231-65122232:- [5]
Sequence CGTAAAGGGGCGGAGCTAGGACTGCCTTGGGCGGTACAAAT
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; fibroblasts; A549; GSC-11; HEK293A-TOA; TIME
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530451.1
External Link RMBase: m6A_site_147289
mod ID: M6ASITE006645 Click to Show/Hide the Full List
mod site chr11:65122361-65122362:- [5]
Sequence TCCCCGCAGCGTAGCCCGGAACATGGTAGCTGCCATCTTTA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; A549; HEK293T; H1A; H1B; hESCs; fibroblasts; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530451.1
External Link RMBase: m6A_site_147293
mod ID: M6ASITE006646 Click to Show/Hide the Full List
mod site chr11:65122395-65122396:- [5]
Sequence GTAGCCCGCAGCCCCGCTGGACACCGGTTCTCCATCCCCGC
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; hESCs; fibroblasts; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000530451.1
External Link RMBase: m6A_site_147295
mod ID: M6ASITE006648 Click to Show/Hide the Full List
mod site chr11:65127291-65127292:- [5]
Sequence GTATATACAGCCAAATAAAAACTTGCATTAACAATTGGTGG
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000530451.1; ENST00000449943.5; ENST00000294256.12; ENST00000526060.5; ENST00000377190.7
External Link RMBase: m6A_site_147340
mod ID: M6ASITE006649 Click to Show/Hide the Full List
mod site chr11:65127567-65127568:- [6]
Sequence TGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTTT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000526060.5; ENST00000307289.10; ENST00000449943.5; ENST00000377190.7; ENST00000294256.12; ENST00000530451.1
External Link RMBase: m6A_site_147343
mod ID: M6ASITE006650 Click to Show/Hide the Full List
mod site chr11:65127637-65127638:- [6]
Sequence CAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000294256.12; ENST00000449943.5; ENST00000530451.1; ENST00000307289.10; ENST00000526060.5; ENST00000377190.7
External Link RMBase: m6A_site_147344
mod ID: M6ASITE006651 Click to Show/Hide the Full List
mod site chr11:65127705-65127706:- [6]
Sequence CAGCTTCTCAAGTGAGACTGACCTGTCTCACCCAGCAGCCA
Motif Score 2.839113095
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000377190.7; ENST00000294256.12; ENST00000449943.5; ENST00000526060.5; ENST00000307289.10; ENST00000530451.1
External Link RMBase: m6A_site_147345
mod ID: M6ASITE006652 Click to Show/Hide the Full List
mod site chr11:65127709-65127710:- [5]
Sequence TCTGCAGCTTCTCAAGTGAGACTGACCTGTCTCACCCAGCA
Motif Score 3.319380952
Cell/Tissue List HeLa; A549; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000449943.5; ENST00000530451.1; ENST00000307289.10; ENST00000377190.7; ENST00000526060.5; ENST00000294256.12
External Link RMBase: m6A_site_147346
mod ID: M6ASITE006653 Click to Show/Hide the Full List
mod site chr11:65127763-65127764:- [5]
Sequence CAGGCGGGCAGCACTGAGGGACCCTGCCCCGCCCCTCCCCC
Motif Score 3.622404762
Cell/Tissue List HeLa; HEK293T; A549; HepG2; H1B; MM6; Huh7; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000294256.12; ENST00000449943.5; ENST00000530451.1; ENST00000377190.7; ENST00000526060.5
External Link RMBase: m6A_site_147347
mod ID: M6ASITE006654 Click to Show/Hide the Full List
mod site chr11:65127821-65127822:- [4]
Sequence TCTGCGTCTTACTGGCAACCACACAACTCAGGGAAAGGAAT
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000526060.5; ENST00000530451.1; ENST00000307289.10; ENST00000294256.12; ENST00000449943.5; ENST00000377190.7
External Link RMBase: m6A_site_147348
mod ID: M6ASITE006655 Click to Show/Hide the Full List
mod site chr11:65127925-65127926:- [5]
Sequence CTCGCTGGCCCACCCCTAAGACTGGTACCCATTTCCTTTTC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000530451.1; ENST00000377190.7; ENST00000526060.5; ENST00000294256.12; ENST00000307289.10; ENST00000449943.5
External Link RMBase: m6A_site_147349
mod ID: M6ASITE006656 Click to Show/Hide the Full List
mod site chr11:65127950-65127951:- [5]
Sequence GGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCC
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000294256.12; ENST00000526060.5; ENST00000307289.10; ENST00000377190.7; ENST00000530451.1; ENST00000449943.5
External Link RMBase: m6A_site_147350
mod ID: M6ASITE006657 Click to Show/Hide the Full List
mod site chr11:65127979-65127980:- [5]
Sequence GCTCCCGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000449943.5; ENST00000526060.5; ENST00000294256.12; ENST00000530451.1; ENST00000377190.7
External Link RMBase: m6A_site_147351
mod ID: M6ASITE006658 Click to Show/Hide the Full List
mod site chr11:65128008-65128009:- [5]
Sequence GAGTCACACTGCAGTGCCGAACAGTATTAGCTCCCGTTCCC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000526060.5; ENST00000530451.1; ENST00000377190.7; ENST00000449943.5; ENST00000294256.12
External Link RMBase: m6A_site_147352
mod ID: M6ASITE006659 Click to Show/Hide the Full List
mod site chr11:65128328-65128329:- [5]
Sequence TTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGC
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; liver; MT4
Seq Type List m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000377190.7; ENST00000449943.5; ENST00000530451.1; ENST00000526060.5; ENST00000294256.12
External Link RMBase: m6A_site_147353
mod ID: M6ASITE006660 Click to Show/Hide the Full List
mod site chr11:65128525-65128526:- [5]
Sequence TCCAGCCGGGGGAGCAGGGAACTTCTCTAGGTTCCACTTCC
Motif Score 3.373380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000449943.5; ENST00000530451.1; ENST00000526060.5; ENST00000377190.7; ENST00000307289.10; ENST00000294256.12
External Link RMBase: m6A_site_147354
mod ID: M6ASITE006661 Click to Show/Hide the Full List
mod site chr11:65128664-65128665:- [7]
Sequence CCACTGAGGAGACTGCCACTACAGTTGTTGCTGCTGCCTCC
Motif Score 2.078666667
Cell/Tissue List liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000530451.1; ENST00000307289.10; ENST00000449943.5; ENST00000377190.7; ENST00000294256.12; ENST00000526060.5
External Link RMBase: m6A_site_147355
mod ID: M6ASITE006662 Click to Show/Hide the Full List
mod site chr11:65129935-65129936:- [5]
Sequence GTCTGGCCCCAGCAGCCCAGACTGAGCCTCTCTCTCTCCAG
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000377190.7; ENST00000294256.12; ENST00000610479.1; ENST00000530451.1; MIMAT0027403; ENST00000527765.1; ENST00000526060.5; ENST00000449943.5; ENST00000307289.10
External Link RMBase: m6A_site_147356
mod ID: M6ASITE006663 Click to Show/Hide the Full List
mod site chr11:65130791-65130792:- [8]
Sequence CCTGGTTCCAGCGGCAGCAGACCTGCCCCACCTGCCGTATG
Motif Score 2.876744048
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000449943.5; ENST00000526060.5; ENST00000294256.12; ENST00000377190.7; ENST00000526121.5
External Link RMBase: m6A_site_147357
mod ID: M6ASITE006664 Click to Show/Hide the Full List
mod site chr11:65130934-65130935:- [4]
Sequence CAAGAGACTGCCCTGCAACCACATTTTCCATACCAGGTGGG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000307289.10; ENST00000377190.7; ENST00000526121.5; ENST00000526060.5; ENST00000449943.5; ENST00000294256.12
External Link RMBase: m6A_site_147358
mod ID: M6ASITE006665 Click to Show/Hide the Full List
mod site chr11:65130948-65130949:- [8]
Sequence ATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTT
Motif Score 3.319380952
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000526060.5; ENST00000307289.10; ENST00000294256.12; ENST00000526121.5; ENST00000377190.7; ENST00000449943.5
External Link RMBase: m6A_site_147359
mod ID: M6ASITE006666 Click to Show/Hide the Full List
mod site chr11:65130997-65130998:- [4]
Sequence AGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCC
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T; Huh7
Seq Type List MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000307289.10; ENST00000531018.5; ENST00000449943.5; ENST00000526121.5; ENST00000532771.5; ENST00000377190.7; ENST00000526060.5; ENST00000294256.12
External Link RMBase: m6A_site_147360
mod ID: M6ASITE006667 Click to Show/Hide the Full List
mod site chr11:65131137-65131138:- [8]
Sequence CCGAGCCATCCGCAACATGAACACCCTGTAAGTAGGCTTGT
Motif Score 2.951386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000531018.5; ENST00000526060.5; ENST00000449943.5; ENST00000307289.10; ENST00000526121.5; ENST00000527142.5; ENST00000529207.5; ENST00000294256.12; ENST00000377190.7; ENST00000532771.5
External Link RMBase: m6A_site_147361
mod ID: M6ASITE006668 Click to Show/Hide the Full List
mod site chr11:65131318-65131319:- [4]
Sequence GACCATCATGATCAAGGTGCACACCTTCCCACTCTTTGCCA
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000307289.10; ENST00000529207.5; ENST00000294256.12; ENST00000528487.1; ENST00000531018.5; ENST00000526060.5; ENST00000449943.5; ENST00000527142.5; ENST00000526121.5; ENST00000377190.7; ENST00000532771.5
External Link RMBase: m6A_site_147362
mod ID: M6ASITE006669 Click to Show/Hide the Full List
mod site chr11:65132296-65132297:- [7]
Sequence CTTCGTCAGCCACGCCTATCACAGCATCCTGACCCGTGGGG
Motif Score 2.047297619
Cell/Tissue List kidney; liver
Seq Type List m6A-REF-seq
Transcript ID List ENST00000526060.5; ENST00000528487.1; ENST00000527142.5; ENST00000526121.5; ENST00000532771.5; ENST00000307289.10; ENST00000531018.5; ENST00000377190.7; ENST00000449943.5; ENST00000529207.5; ENST00000294256.12
External Link RMBase: m6A_site_147363
mod ID: M6ASITE006670 Click to Show/Hide the Full List
mod site chr11:65132925-65132926:- [5]
Sequence GCTGGCTGAGGACCGTGTGGACTTTGTGAGTCAAGGCAGGG
Motif Score 4.065041667
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000531018.5; ENST00000533685.1; ENST00000529207.5; ENST00000449943.5; ENST00000527142.5; ENST00000532771.5; ENST00000525874.1; ENST00000307289.10; ENST00000528487.1; ENST00000526060.5; ENST00000377190.7; ENST00000294256.12
External Link RMBase: m6A_site_147364
mod ID: M6ASITE006671 Click to Show/Hide the Full List
mod site chr11:65132934-65132935:- [5]
Sequence TTTCCACTGGCTGGCTGAGGACCGTGTGGACTTTGTGAGTC
Motif Score 3.622404762
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000294256.12; ENST00000531018.5; ENST00000377190.7; ENST00000449943.5; ENST00000527142.5; ENST00000526060.5; ENST00000532771.5; ENST00000525874.1; ENST00000533685.1; ENST00000529207.5; ENST00000307289.10; ENST00000528487.1
External Link RMBase: m6A_site_147365
mod ID: M6ASITE006672 Click to Show/Hide the Full List
mod site chr11:65133037-65133038:- [5]
Sequence CCTGGTACGCCGTCACAGAGACTTGTCTGGCCTTCACCGTT
Motif Score 3.319380952
Cell/Tissue List HeLa; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000294256.12; ENST00000525874.1; ENST00000377190.7; ENST00000307289.10; ENST00000527142.5; ENST00000532771.5; ENST00000531018.5; ENST00000533685.1; ENST00000526060.5; ENST00000528487.1; ENST00000529207.5; ENST00000449943.5
External Link RMBase: m6A_site_147366
mod ID: M6ASITE006673 Click to Show/Hide the Full List
mod site chr11:65133244-65133245:- [4]
Sequence TCCCCACTCCTAGGTCCTGTACATCCAGGCCTTTGTCCTTG
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000377190.7; ENST00000532771.5; ENST00000531018.5; ENST00000529207.5; ENST00000449943.5; ENST00000307289.10; ENST00000526060.5; ENST00000525874.1; ENST00000527142.5; ENST00000533685.1; ENST00000294256.12; ENST00000528487.1
External Link RMBase: m6A_site_147367
mod ID: M6ASITE006674 Click to Show/Hide the Full List
mod site chr11:65133275-65133276:- [5]
Sequence AAAGCAGAAAGTGACCTCAAACCACAGCCTCTCCCCACTCC
Motif Score 2.185083333
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000531018.5; ENST00000449943.5; ENST00000307289.10; ENST00000528487.1; ENST00000294256.12; ENST00000529207.5; ENST00000525874.1; ENST00000526060.5; ENST00000533685.1; ENST00000527142.5; ENST00000532771.5; ENST00000377190.7
External Link RMBase: m6A_site_147368
mod ID: M6ASITE006675 Click to Show/Hide the Full List
mod site chr11:65133523-65133524:- [4]
Sequence GCTCACGCCTACTACCTCAAACACCAGTTCTACCCCACTGT
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000526060.5; ENST00000377190.7; ENST00000527142.5; ENST00000449943.5; ENST00000307289.10; ENST00000294256.12; ENST00000532771.5; ENST00000528487.1
External Link RMBase: m6A_site_147369
mod ID: M6ASITE006676 Click to Show/Hide the Full List
mod site chr11:65134328-65134329:- [5]
Sequence GGCCTGTCAGCTGGCCGGAGACCTCAGACGCCGGTGCGGCC
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000449943.5; ENST00000377190.7; ENST00000294256.12; ENST00000528487.1; ENST00000526060.5; ENST00000307289.10
External Link RMBase: m6A_site_147370
N7-methylguanosine (m7G)
In total 1 m6A sequence/site(s) in this target gene
mod ID: m7GSITE000007 Click to Show/Hide the Full List
mod site chr11:65122186-65122187:- [9]
Sequence GGGAACCGCGCGGTCGCTCAGCAGTGACGTGACACGCAGCC
Cell/Tissue List A549; HeLa; HepG2
Seq Type List BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List ENST00000530451.1
External Link RMBase: m7G_site_165