m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01742)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05210 | ||
| Epigenetic Regulator | Small nucleolar RNA host gene 29 (SNHG29) | |
| Regulated Target | Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1) | |
| Crosstalk relationship | ncRNA → m6A | |
| Disease | Cervical cancer | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01742)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE004856 | Click to Show/Hide the Full List | ||
| mod site | chr11:65128918-65128919:- | [2] | |
| Sequence | TCCCTGCCTGCAAGCACCTTACAGCTAAGGGATAGAATCAT | ||
| Transcript ID List | ENST00000527765.1; ENST00000294256.12; ENST00000377190.7; ENST00000307289.10; ENST00000530451.1; ENST00000449943.5; ENST00000526060.5 | ||
| External Link | RMBase: RNA-editing_site_22536 | ||
5-methylcytidine (m5C)
| In total 3 m6A sequence/site(s) in this target gene | |||
| mod ID: M5CSITE005207 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122105-65122106:- | [3] | |
| Sequence | CGACTCCATCTTCGCGGTAGCTGGGACCGCCGTTCAGGTAA | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000526555.5; ENST00000279259.7; ENST00000434372.2; ENST00000530451.1; ENST00000529639.6; ENST00000531357.1; ENST00000527548.5 | ||
| External Link | RMBase: m5C_site_7837 | ||
| mod ID: M5CSITE005208 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122111-65122112:- | [3] | |
| Sequence | CTTTCTCGACTCCATCTTCGCGGTAGCTGGGACCGCCGTTC | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000279259.7; ENST00000529639.6; ENST00000531357.1; ENST00000526555.5; ENST00000434372.2; ENST00000527548.5; ENST00000530451.1 | ||
| External Link | RMBase: m5C_site_7838 | ||
| mod ID: M5CSITE005209 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127761-65127762:- | [3] | |
| Sequence | GGCGGGCAGCACTGAGGGACCCTGCCCCGCCCCTCCCCCCA | ||
| Seq Type List | Bisulfite-seq | ||
| Transcript ID List | ENST00000377190.7; ENST00000307289.10; ENST00000449943.5; ENST00000530451.1; ENST00000526060.5; ENST00000294256.12 | ||
| External Link | RMBase: m5C_site_7840 | ||
N6-methyladenosine (m6A)
| In total 39 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE006637 | Click to Show/Hide the Full List | ||
| mod site | chr11:65121783-65121784:- | [4] | |
| Sequence | TTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGG | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000525297.5; ENST00000531357.1; ENST00000529639.6; ENST00000529259.1; ENST00000279259.7; ENST00000526555.5; ENST00000527548.5; ENST00000531743.5; ENST00000530451.1; ENST00000434372.2 | ||
| External Link | RMBase: m6A_site_147282 | ||
| mod ID: M6ASITE006638 | Click to Show/Hide the Full List | ||
| mod site | chr11:65121898-65121899:- | [5] | |
| Sequence | CCCGTCGCGATCGTTTCTGGACCGCTTTCCACTCCCAAATC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; H1B; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000531743.5; ENST00000529639.6; ENST00000529259.1; ENST00000527548.5; ENST00000530451.1; ENST00000531357.1; ENST00000526555.5; ENST00000434372.2; ENST00000279259.7 | ||
| External Link | RMBase: m6A_site_147283 | ||
| mod ID: M6ASITE006639 | Click to Show/Hide the Full List | ||
| mod site | chr11:65121967-65121968:- | [5] | |
| Sequence | CTGCTCCAGTCCCTATCCGAACTCCTTGGGAGGCCTGGCCT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; A549; Jurkat; peripheral-blood; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000530451.1; ENST00000434372.2; ENST00000531357.1; ENST00000531743.5; ENST00000279259.7; ENST00000526555.5; ENST00000527548.5; ENST00000529639.6 | ||
| External Link | RMBase: m6A_site_147284 | ||
| mod ID: M6ASITE006640 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122015-65122016:- | [5] | |
| Sequence | GGTCAGAAGGCGCGGGGGGAACCGAAGAACGGGGCCTGCTC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; Jurkat; peripheral-blood; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000434372.2; ENST00000526555.5; ENST00000529639.6; ENST00000530451.1; ENST00000531743.5; ENST00000527548.5; ENST00000531357.1; ENST00000279259.7 | ||
| External Link | RMBase: m6A_site_147285 | ||
| mod ID: M6ASITE006641 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122100-65122101:- | [5] | |
| Sequence | CCATCTTCGCGGTAGCTGGGACCGCCGTTCAGGTAAGAATG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; A549; HEK293T; H1A; H1B; fibroblasts; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000434372.2; ENST00000529639.6; ENST00000530451.1; ENST00000526555.5; ENST00000531357.1; ENST00000527548.5; ENST00000279259.7 | ||
| External Link | RMBase: m6A_site_147286 | ||
| mod ID: M6ASITE006642 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122175-65122176:- | [4] | |
| Sequence | GGTCGCTCAGCAGTGACGTGACACGCAGCCCACGGTCTGTA | ||
| Motif Score | 2.859755952 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000434372.2; ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147287 | ||
| mod ID: M6ASITE006643 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122202-65122203:- | [5] | |
| Sequence | GGCGGTACAAATAGCAGGGAACCGCGCGGTCGCTCAGCAGT | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; H1A; H1B; HEK293T; fibroblasts; A549; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; MM6 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147288 | ||
| mod ID: M6ASITE006644 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122231-65122232:- | [5] | |
| Sequence | CGTAAAGGGGCGGAGCTAGGACTGCCTTGGGCGGTACAAAT | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; fibroblasts; A549; GSC-11; HEK293A-TOA; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147289 | ||
| mod ID: M6ASITE006645 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122361-65122362:- | [5] | |
| Sequence | TCCCCGCAGCGTAGCCCGGAACATGGTAGCTGCCATCTTTA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; A549; HEK293T; H1A; H1B; hESCs; fibroblasts; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147293 | ||
| mod ID: M6ASITE006646 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122395-65122396:- | [5] | |
| Sequence | GTAGCCCGCAGCCCCGCTGGACACCGGTTCTCCATCCCCGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; H1A; H1B; hESCs; fibroblasts; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147295 | ||
| mod ID: M6ASITE006648 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127291-65127292:- | [5] | |
| Sequence | GTATATACAGCCAAATAAAAACTTGCATTAACAATTGGTGG | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; H1A; H1B; A549; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000530451.1; ENST00000449943.5; ENST00000294256.12; ENST00000526060.5; ENST00000377190.7 | ||
| External Link | RMBase: m6A_site_147340 | ||
| mod ID: M6ASITE006649 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127567-65127568:- | [6] | |
| Sequence | TGAAGTTTAGAATTGGAATTACTTCCTTACTAGTGTCTTTT | ||
| Motif Score | 2.494845238 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000526060.5; ENST00000307289.10; ENST00000449943.5; ENST00000377190.7; ENST00000294256.12; ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147343 | ||
| mod ID: M6ASITE006650 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127637-65127638:- | [6] | |
| Sequence | CAGTGCGCCTGCTCCTGACCACTGCAATCCCAGCGCCCAAG | ||
| Motif Score | 2.475107143 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000294256.12; ENST00000449943.5; ENST00000530451.1; ENST00000307289.10; ENST00000526060.5; ENST00000377190.7 | ||
| External Link | RMBase: m6A_site_147344 | ||
| mod ID: M6ASITE006651 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127705-65127706:- | [6] | |
| Sequence | CAGCTTCTCAAGTGAGACTGACCTGTCTCACCCAGCAGCCA | ||
| Motif Score | 2.839113095 | ||
| Cell/Tissue List | HEK293T | ||
| Seq Type List | DART-seq | ||
| Transcript ID List | ENST00000377190.7; ENST00000294256.12; ENST00000449943.5; ENST00000526060.5; ENST00000307289.10; ENST00000530451.1 | ||
| External Link | RMBase: m6A_site_147345 | ||
| mod ID: M6ASITE006652 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127709-65127710:- | [5] | |
| Sequence | TCTGCAGCTTCTCAAGTGAGACTGACCTGTCTCACCCAGCA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; A549; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000449943.5; ENST00000530451.1; ENST00000307289.10; ENST00000377190.7; ENST00000526060.5; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147346 | ||
| mod ID: M6ASITE006653 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127763-65127764:- | [5] | |
| Sequence | CAGGCGGGCAGCACTGAGGGACCCTGCCCCGCCCCTCCCCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293T; A549; HepG2; H1B; MM6; Huh7; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000294256.12; ENST00000449943.5; ENST00000530451.1; ENST00000377190.7; ENST00000526060.5 | ||
| External Link | RMBase: m6A_site_147347 | ||
| mod ID: M6ASITE006654 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127821-65127822:- | [4] | |
| Sequence | TCTGCGTCTTACTGGCAACCACACAACTCAGGGAAAGGAAT | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000526060.5; ENST00000530451.1; ENST00000307289.10; ENST00000294256.12; ENST00000449943.5; ENST00000377190.7 | ||
| External Link | RMBase: m6A_site_147348 | ||
| mod ID: M6ASITE006655 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127925-65127926:- | [5] | |
| Sequence | CTCGCTGGCCCACCCCTAAGACTGGTACCCATTTCCTTTTC | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; AML | ||
| Seq Type List | m6A-seq; MeRIP-seq; miCLIP | ||
| Transcript ID List | ENST00000530451.1; ENST00000377190.7; ENST00000526060.5; ENST00000294256.12; ENST00000307289.10; ENST00000449943.5 | ||
| External Link | RMBase: m6A_site_147349 | ||
| mod ID: M6ASITE006656 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127950-65127951:- | [5] | |
| Sequence | GGGCTGGAGGCAAGCTATGAACTTGCTCGCTGGCCCACCCC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000294256.12; ENST00000526060.5; ENST00000307289.10; ENST00000377190.7; ENST00000530451.1; ENST00000449943.5 | ||
| External Link | RMBase: m6A_site_147350 | ||
| mod ID: M6ASITE006657 | Click to Show/Hide the Full List | ||
| mod site | chr11:65127979-65127980:- | [5] | |
| Sequence | GCTCCCGTTCCCAAGTGTGGACTCCAGAGGGGCTGGAGGCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000449943.5; ENST00000526060.5; ENST00000294256.12; ENST00000530451.1; ENST00000377190.7 | ||
| External Link | RMBase: m6A_site_147351 | ||
| mod ID: M6ASITE006658 | Click to Show/Hide the Full List | ||
| mod site | chr11:65128008-65128009:- | [5] | |
| Sequence | GAGTCACACTGCAGTGCCGAACAGTATTAGCTCCCGTTCCC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000526060.5; ENST00000530451.1; ENST00000377190.7; ENST00000449943.5; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147352 | ||
| mod ID: M6ASITE006659 | Click to Show/Hide the Full List | ||
| mod site | chr11:65128328-65128329:- | [5] | |
| Sequence | TTTGAGCAGCCCTCGCTGGAACATGTCCTGCCACCAAGTGC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; liver; MT4 | ||
| Seq Type List | m6A-seq; m6A-REF-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000377190.7; ENST00000449943.5; ENST00000530451.1; ENST00000526060.5; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147353 | ||
| mod ID: M6ASITE006660 | Click to Show/Hide the Full List | ||
| mod site | chr11:65128525-65128526:- | [5] | |
| Sequence | TCCAGCCGGGGGAGCAGGGAACTTCTCTAGGTTCCACTTCC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000449943.5; ENST00000530451.1; ENST00000526060.5; ENST00000377190.7; ENST00000307289.10; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147354 | ||
| mod ID: M6ASITE006661 | Click to Show/Hide the Full List | ||
| mod site | chr11:65128664-65128665:- | [7] | |
| Sequence | CCACTGAGGAGACTGCCACTACAGTTGTTGCTGCTGCCTCC | ||
| Motif Score | 2.078666667 | ||
| Cell/Tissue List | liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000530451.1; ENST00000307289.10; ENST00000449943.5; ENST00000377190.7; ENST00000294256.12; ENST00000526060.5 | ||
| External Link | RMBase: m6A_site_147355 | ||
| mod ID: M6ASITE006662 | Click to Show/Hide the Full List | ||
| mod site | chr11:65129935-65129936:- | [5] | |
| Sequence | GTCTGGCCCCAGCAGCCCAGACTGAGCCTCTCTCTCTCCAG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000377190.7; ENST00000294256.12; ENST00000610479.1; ENST00000530451.1; MIMAT0027403; ENST00000527765.1; ENST00000526060.5; ENST00000449943.5; ENST00000307289.10 | ||
| External Link | RMBase: m6A_site_147356 | ||
| mod ID: M6ASITE006663 | Click to Show/Hide the Full List | ||
| mod site | chr11:65130791-65130792:- | [8] | |
| Sequence | CCTGGTTCCAGCGGCAGCAGACCTGCCCCACCTGCCGTATG | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000449943.5; ENST00000526060.5; ENST00000294256.12; ENST00000377190.7; ENST00000526121.5 | ||
| External Link | RMBase: m6A_site_147357 | ||
| mod ID: M6ASITE006664 | Click to Show/Hide the Full List | ||
| mod site | chr11:65130934-65130935:- | [4] | |
| Sequence | CAAGAGACTGCCCTGCAACCACATTTTCCATACCAGGTGGG | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000377190.7; ENST00000526121.5; ENST00000526060.5; ENST00000449943.5; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147358 | ||
| mod ID: M6ASITE006665 | Click to Show/Hide the Full List | ||
| mod site | chr11:65130948-65130949:- | [8] | |
| Sequence | ATGGTGACTGGTGCCAAGAGACTGCCCTGCAACCACATTTT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000526060.5; ENST00000307289.10; ENST00000294256.12; ENST00000526121.5; ENST00000377190.7; ENST00000449943.5 | ||
| External Link | RMBase: m6A_site_147359 | ||
| mod ID: M6ASITE006666 | Click to Show/Hide the Full List | ||
| mod site | chr11:65130997-65130998:- | [4] | |
| Sequence | AGAGGAGCTCCAGGCAATGGACAATGTCTGCATCATCTGCC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | hESC-HEK293T; Huh7 | ||
| Seq Type List | MAZTER-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000531018.5; ENST00000449943.5; ENST00000526121.5; ENST00000532771.5; ENST00000377190.7; ENST00000526060.5; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147360 | ||
| mod ID: M6ASITE006667 | Click to Show/Hide the Full List | ||
| mod site | chr11:65131137-65131138:- | [8] | |
| Sequence | CCGAGCCATCCGCAACATGAACACCCTGTAAGTAGGCTTGT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000531018.5; ENST00000526060.5; ENST00000449943.5; ENST00000307289.10; ENST00000526121.5; ENST00000527142.5; ENST00000529207.5; ENST00000294256.12; ENST00000377190.7; ENST00000532771.5 | ||
| External Link | RMBase: m6A_site_147361 | ||
| mod ID: M6ASITE006668 | Click to Show/Hide the Full List | ||
| mod site | chr11:65131318-65131319:- | [4] | |
| Sequence | GACCATCATGATCAAGGTGCACACCTTCCCACTCTTTGCCA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000307289.10; ENST00000529207.5; ENST00000294256.12; ENST00000528487.1; ENST00000531018.5; ENST00000526060.5; ENST00000449943.5; ENST00000527142.5; ENST00000526121.5; ENST00000377190.7; ENST00000532771.5 | ||
| External Link | RMBase: m6A_site_147362 | ||
| mod ID: M6ASITE006669 | Click to Show/Hide the Full List | ||
| mod site | chr11:65132296-65132297:- | [7] | |
| Sequence | CTTCGTCAGCCACGCCTATCACAGCATCCTGACCCGTGGGG | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | kidney; liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000526060.5; ENST00000528487.1; ENST00000527142.5; ENST00000526121.5; ENST00000532771.5; ENST00000307289.10; ENST00000531018.5; ENST00000377190.7; ENST00000449943.5; ENST00000529207.5; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147363 | ||
| mod ID: M6ASITE006670 | Click to Show/Hide the Full List | ||
| mod site | chr11:65132925-65132926:- | [5] | |
| Sequence | GCTGGCTGAGGACCGTGTGGACTTTGTGAGTCAAGGCAGGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000531018.5; ENST00000533685.1; ENST00000529207.5; ENST00000449943.5; ENST00000527142.5; ENST00000532771.5; ENST00000525874.1; ENST00000307289.10; ENST00000528487.1; ENST00000526060.5; ENST00000377190.7; ENST00000294256.12 | ||
| External Link | RMBase: m6A_site_147364 | ||
| mod ID: M6ASITE006671 | Click to Show/Hide the Full List | ||
| mod site | chr11:65132934-65132935:- | [5] | |
| Sequence | TTTCCACTGGCTGGCTGAGGACCGTGTGGACTTTGTGAGTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000294256.12; ENST00000531018.5; ENST00000377190.7; ENST00000449943.5; ENST00000527142.5; ENST00000526060.5; ENST00000532771.5; ENST00000525874.1; ENST00000533685.1; ENST00000529207.5; ENST00000307289.10; ENST00000528487.1 | ||
| External Link | RMBase: m6A_site_147365 | ||
| mod ID: M6ASITE006672 | Click to Show/Hide the Full List | ||
| mod site | chr11:65133037-65133038:- | [5] | |
| Sequence | CCTGGTACGCCGTCACAGAGACTTGTCTGGCCTTCACCGTT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | HeLa; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000294256.12; ENST00000525874.1; ENST00000377190.7; ENST00000307289.10; ENST00000527142.5; ENST00000532771.5; ENST00000531018.5; ENST00000533685.1; ENST00000526060.5; ENST00000528487.1; ENST00000529207.5; ENST00000449943.5 | ||
| External Link | RMBase: m6A_site_147366 | ||
| mod ID: M6ASITE006673 | Click to Show/Hide the Full List | ||
| mod site | chr11:65133244-65133245:- | [4] | |
| Sequence | TCCCCACTCCTAGGTCCTGTACATCCAGGCCTTTGTCCTTG | ||
| Motif Score | 2.856142857 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000377190.7; ENST00000532771.5; ENST00000531018.5; ENST00000529207.5; ENST00000449943.5; ENST00000307289.10; ENST00000526060.5; ENST00000525874.1; ENST00000527142.5; ENST00000533685.1; ENST00000294256.12; ENST00000528487.1 | ||
| External Link | RMBase: m6A_site_147367 | ||
| mod ID: M6ASITE006674 | Click to Show/Hide the Full List | ||
| mod site | chr11:65133275-65133276:- | [5] | |
| Sequence | AAAGCAGAAAGTGACCTCAAACCACAGCCTCTCCCCACTCC | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000531018.5; ENST00000449943.5; ENST00000307289.10; ENST00000528487.1; ENST00000294256.12; ENST00000529207.5; ENST00000525874.1; ENST00000526060.5; ENST00000533685.1; ENST00000527142.5; ENST00000532771.5; ENST00000377190.7 | ||
| External Link | RMBase: m6A_site_147368 | ||
| mod ID: M6ASITE006675 | Click to Show/Hide the Full List | ||
| mod site | chr11:65133523-65133524:- | [4] | |
| Sequence | GCTCACGCCTACTACCTCAAACACCAGTTCTACCCCACTGT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000526060.5; ENST00000377190.7; ENST00000527142.5; ENST00000449943.5; ENST00000307289.10; ENST00000294256.12; ENST00000532771.5; ENST00000528487.1 | ||
| External Link | RMBase: m6A_site_147369 | ||
| mod ID: M6ASITE006676 | Click to Show/Hide the Full List | ||
| mod site | chr11:65134328-65134329:- | [5] | |
| Sequence | GGCCTGTCAGCTGGCCGGAGACCTCAGACGCCGGTGCGGCC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000449943.5; ENST00000377190.7; ENST00000294256.12; ENST00000528487.1; ENST00000526060.5; ENST00000307289.10 | ||
| External Link | RMBase: m6A_site_147370 | ||
N7-methylguanosine (m7G)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: m7GSITE000007 | Click to Show/Hide the Full List | ||
| mod site | chr11:65122186-65122187:- | [9] | |
| Sequence | GGGAACCGCGCGGTCGCTCAGCAGTGACGTGACACGCAGCC | ||
| Cell/Tissue List | A549; HeLa; HepG2 | ||
| Seq Type List | BoRed-seq&m7G-RIP-seq; m7G-seq | ||
| Transcript ID List | ENST00000530451.1 | ||
| External Link | RMBase: m7G_site_165 | ||
References