m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01737)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: RNA-binding motif protein 15 (RBM15)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05204 | ||
| Epigenetic Regulator | FTO intronic transcript 1 (FTO-IT1) | |
| Regulated Target | RNA binding motif protein 15 (RBM15) | |
| Crosstalk relationship | ncRNA → m6A | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01737)
| In total 3 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE002679 | Click to Show/Hide the Full List | ||
| mod site | chr8:94933571-94933572:- | [2] | |
| Sequence | GGGTTTCACCATGTTGATTAAGCTGGTCTCAAACTCCTGAC | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: RNA-editing_site_132040 | ||
| mod ID: A2ISITE002680 | Click to Show/Hide the Full List | ||
| mod site | chr8:94939539-94939540:- | [2] | |
| Sequence | AGCCAGGTGTGGTGGTGCACACCTGTAGTCCCAGCTACTCA | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5; rmsk_2585333 | ||
| External Link | RMBase: RNA-editing_site_132041 | ||
| mod ID: A2ISITE002681 | Click to Show/Hide the Full List | ||
| mod site | chr8:94939639-94939640:- | [2] | |
| Sequence | TTTGGGAGGCCAAGGCAGGCAGATCACTTAAGCTCAGGAGT | ||
| Transcript ID List | ENST00000342697.5; rmsk_2585333; ENST00000448464.6 | ||
| External Link | RMBase: RNA-editing_site_132042 | ||
N6-methyladenosine (m6A)
| In total 28 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE086090 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926256-94926257:- | [3] | |
| Sequence | AACTTGAAAATTCAAAAGGGACATTTGGTTAGGTTACTGTA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | liver; TREX | ||
| Seq Type List | m6A-REF-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803760 | ||
| mod ID: M6ASITE086091 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926325-94926326:- | [4] | |
| Sequence | GAGACTGAAGAGTATTGTAGACTGTACATGTGCCTTCTTAA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | TREX | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803761 | ||
| mod ID: M6ASITE086092 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926342-94926343:- | [5] | |
| Sequence | GCAGGGCATGAGTTAGGGAGACTGAAGAGTATTGTAGACTG | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | Huh7; TREX | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803762 | ||
| mod ID: M6ASITE086093 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926381-94926382:- | [5] | |
| Sequence | TTTCTCAAGTAAAATTGTGAACATATTTCCTTTATAGGGGC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | Huh7 | ||
| Seq Type List | MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803763 | ||
| mod ID: M6ASITE086094 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926451-94926452:- | [6] | |
| Sequence | TTTTCCTCCAGAGATTTTGAACTTTAATAATTGCGTGTGTT | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | CD34; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803764 | ||
| mod ID: M6ASITE086095 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926535-94926536:- | [6] | |
| Sequence | GGTGGACCTCTGAAAACCAAACCAGTACCTGGGGAGGTTAG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | CD34; Huh7 | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803765 | ||
| mod ID: M6ASITE086096 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926540-94926541:- | [6] | |
| Sequence | TTCTAGGTGGACCTCTGAAAACCAAACCAGTACCTGGGGAG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | CD34 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803766 | ||
| mod ID: M6ASITE086097 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926550-94926551:- | [6] | |
| Sequence | AGTATTTGTTTTCTAGGTGGACCTCTGAAAACCAAACCAGT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | CD34 | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803767 | ||
| mod ID: M6ASITE086098 | Click to Show/Hide the Full List | ||
| mod site | chr8:94926750-94926751:- | [3] | |
| Sequence | GGAGAAAGAGGTACTGGAAAACATGCAGATGAGGATATCTT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803768 | ||
| mod ID: M6ASITE086099 | Click to Show/Hide the Full List | ||
| mod site | chr8:94927111-94927112:- | [3] | |
| Sequence | GGAAAACTTTAAGAGTTTCCACATATTAGTTTTCATTTTTT | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803769 | ||
| mod ID: M6ASITE086100 | Click to Show/Hide the Full List | ||
| mod site | chr8:94928127-94928128:- | [3] | |
| Sequence | TTTTCAAGGTTGGGATTACCACACCACCTGGAATATCATAC | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | HEK293 | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803770 | ||
| mod ID: M6ASITE086101 | Click to Show/Hide the Full List | ||
| mod site | chr8:94929098-94929099:- | [7] | |
| Sequence | CAGGGTGCAGGGTTCGATTCACACGTAGGCCAGTTAACTTA | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | rmsk_2585314; ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803771 | ||
| mod ID: M6ASITE086102 | Click to Show/Hide the Full List | ||
| mod site | chr8:94929140-94929141:- | [3] | |
| Sequence | CTCTGCCACAGCTGTTCTTCACAGTGTTGGTGCTAATGAGG | ||
| Motif Score | 2.047297619 | ||
| Cell/Tissue List | liver | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803772 | ||
| mod ID: M6ASITE086103 | Click to Show/Hide the Full List | ||
| mod site | chr8:94930598-94930599:- | [6] | |
| Sequence | ATAAAAGAACACAGTGAAAGACAGCCTCTTAACAGAAATAG | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; Huh7; Jurkat; CD4T; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803773 | ||
| mod ID: M6ASITE086104 | Click to Show/Hide the Full List | ||
| mod site | chr8:94930610-94930611:- | [6] | |
| Sequence | CCTTCCCAGTGGATAAAAGAACACAGTGAAAGACAGCCTCT | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | CD34; HepG2; HEK293T; HeLa; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; Huh7; Jurkat; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803774 | ||
| mod ID: M6ASITE086105 | Click to Show/Hide the Full List | ||
| mod site | chr8:94930649-94930650:- | [6] | |
| Sequence | GCTCATACAACTTTTCTGGAACAACCCAAGAGCTTTCGCCC | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; Huh7; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803775 | ||
| mod ID: M6ASITE086106 | Click to Show/Hide the Full List | ||
| mod site | chr8:94932083-94932084:- | [6] | |
| Sequence | CAGGAAAAGCTGCTTATAAGACTCACGGGCACAGAGTAAGT | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; Huh7; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803776 | ||
| mod ID: M6ASITE086107 | Click to Show/Hide the Full List | ||
| mod site | chr8:94939890-94939891:- | [6] | |
| Sequence | TCAGTGAGGCCACCCGTGGGACTGATGAATTACATAGCCCA | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; hNPCs; hESCs; fibroblasts; GM12878; LCLs; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803777 | ||
| mod ID: M6ASITE086108 | Click to Show/Hide the Full List | ||
| mod site | chr8:94939957-94939958:- | [6] | |
| Sequence | ATGGAAAACCTTCTCATTGAACATCCCAGCATGTCTGTCTA | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; hNPCs; fibroblasts; A549; GM12878; LCLs; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803778 | ||
| mod ID: M6ASITE086109 | Click to Show/Hide the Full List | ||
| mod site | chr8:94939970-94939971:- | [6] | |
| Sequence | GGAAACAAGTCCTATGGAAAACCTTCTCATTGAACATCCCA | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; GM12878; Huh7; HEK293A-TOA; MSC; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803779 | ||
| mod ID: M6ASITE086110 | Click to Show/Hide the Full List | ||
| mod site | chr8:94939986-94939987:- | [6] | |
| Sequence | TAACCACTATCAAGGTGGAAACAAGTCCTATGGAAAACCTT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | CD34; HEK293T; HeLa; A549; GM12878; Huh7; HEK293A-TOA; MSC; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803780 | ||
| mod ID: M6ASITE086111 | Click to Show/Hide the Full List | ||
| mod site | chr8:94940174-94940175:- | [6] | |
| Sequence | AGAAGAAGAAGAAGAGGAGGACATCAGTGAAGAGTCACCTA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | CD34; HEK293T; Jurkat; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803781 | ||
| mod ID: M6ASITE086112 | Click to Show/Hide the Full List | ||
| mod site | chr8:94940881-94940882:- | [6] | |
| Sequence | AGTTCTTCCTCCAACCAAGAACCAGAATTCAATGAGAAAGA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | CD34; HEK293T; hNPCs; Jurkat; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803782 | ||
| mod ID: M6ASITE086113 | Click to Show/Hide the Full List | ||
| mod site | chr8:94940961-94940962:- | [6] | |
| Sequence | TATAAAAGACATCCAGCCAAACTCTCAGTCTTGCCTTAACA | ||
| Motif Score | 2.627720238 | ||
| Cell/Tissue List | CD34; HEK293T; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803783 | ||
| mod ID: M6ASITE086114 | Click to Show/Hide the Full List | ||
| mod site | chr8:94940973-94940974:- | [6] | |
| Sequence | TGAAATCTCAGCTATAAAAGACATCCAGCCAAACTCTCAGT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | CD34; HEK293T; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000342697.5; ENST00000448464.6 | ||
| External Link | RMBase: m6A_site_803784 | ||
| mod ID: M6ASITE086115 | Click to Show/Hide the Full List | ||
| mod site | chr8:94941002-94941003:- | [6] | |
| Sequence | TACCATTGGGCCAACTAAAGACAAGGTTTTGAAATCTCAGC | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | CD34; HEK293T; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803785 | ||
| mod ID: M6ASITE086116 | Click to Show/Hide the Full List | ||
| mod site | chr8:94949343-94949344:- | [6] | |
| Sequence | ACAACAACAAAAGGACTTGGACTGGCCGGCCTGGGCGCAGC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | CD34; HeLa; H1A; fibroblasts; A549; Jurkat; CD4T; GSC-11; HEK293T; MSC; TREX; TIME; GSCs | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803787 | ||
| mod ID: M6ASITE086117 | Click to Show/Hide the Full List | ||
| mod site | chr8:94949349-94949350:- | [6] | |
| Sequence | CGCTGCACAACAACAAAAGGACTTGGACTGGCCGGCCTGGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | CD34; HeLa; H1A; fibroblasts; A549; Jurkat; GSC-11; HEK293T; TREX | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000448464.6; ENST00000342697.5 | ||
| External Link | RMBase: m6A_site_803788 | ||
References