m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01699)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: ELAV-like protein 1 (ELAVL1)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05078 | ||
| Epigenetic Regulator | Circ_DDIT4 | |
| Regulated Target | ELAV-like protein 1 (HuR/ELAVL1) | |
| Crosstalk relationship | ncRNA → m6A | |
| Disease | Prostate cancer | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01699)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE010273 | Click to Show/Hide the Full List | ||
| mod site | chr2:241221551-241221552:+ | [2] | |
| Sequence | GATGATTTTTTTTTTTTTGTATTTTTAGTAGAGACAAAGGT | ||
| Transcript ID List | ENST00000487192.1; ENST00000402430.7; ENST00000274979.12; ENST00000481071.1; ENST00000451047.1; ENST00000459928.1 | ||
| External Link | RMBase: RNA-editing_site_84699 | ||
N6-methyladenosine (m6A)
| In total 23 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE050637 | Click to Show/Hide the Full List | ||
| mod site | chr2:241218292-241218293:+ | [3] | |
| Sequence | CGCGCGCCTACTACCGGTGGACCCGCGCCCACGACCTGCGC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000451047.1; ENST00000481071.1; ENST00000487192.1; ENST00000274979.12; ENST00000402430.7 | ||
| External Link | RMBase: m6A_site_518431 | ||
| mod ID: M6ASITE050638 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223212-241223213:+ | [3] | |
| Sequence | GCTTTCCGGGATGACGATGGACATTATTCCCAGACCTACTG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000481071.1; ENST00000402430.7; ENST00000487192.1; ENST00000459928.1; ENST00000451047.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518432 | ||
| mod ID: M6ASITE050639 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223225-241223226:+ | [3] | |
| Sequence | ACGATGGACATTATTCCCAGACCTACTGGAATCTTCTTGCC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HeLa; HEK293T | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000487192.1; ENST00000459928.1; ENST00000274979.12; ENST00000481071.1; ENST00000451047.1; ENST00000402430.7 | ||
| External Link | RMBase: m6A_site_518433 | ||
| mod ID: M6ASITE050640 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223461-241223462:+ | [3] | |
| Sequence | ATCCCTGGGTTGTGGTGTGGACATTGTGGGTGTCTCCACAG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000274979.12; ENST00000487192.1; ENST00000481071.1; ENST00000459928.1; ENST00000451047.1 | ||
| External Link | RMBase: m6A_site_518434 | ||
| mod ID: M6ASITE050641 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223692-241223693:+ | [3] | |
| Sequence | CTCCGTTGGCCGCCTCCTGGACCTCCTGGTGCCTGACATCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000274979.12; ENST00000487192.1; ENST00000459928.1; ENST00000481071.1; ENST00000451047.1 | ||
| External Link | RMBase: m6A_site_518435 | ||
| mod ID: M6ASITE050642 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223785-241223786:+ | [3] | |
| Sequence | ACTGGCTGAGAATGAGGTGAACTGTACAGCCCAGTCTCGGC | ||
| Motif Score | 3.373380952 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; GM12878; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000481071.1; ENST00000274979.12; ENST00000459928.1; ENST00000487192.1 | ||
| External Link | RMBase: m6A_site_518436 | ||
| mod ID: M6ASITE050643 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223856-241223857:+ | [3] | |
| Sequence | AGTGGCTGCTCTACCTCCGGACACTGAGTCACATCCCTCTT | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; GM12878; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000481071.1; ENST00000274979.12; ENST00000487192.1; ENST00000459928.1 | ||
| External Link | RMBase: m6A_site_518437 | ||
| mod ID: M6ASITE050644 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223900-241223901:+ | [3] | |
| Sequence | CTTGCTGCCCTTTTTTGGGGACAGGTTCTTTTTGGAACGAA | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; hESCs; GM12878; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000274979.12; ENST00000487192.1; ENST00000459928.1; ENST00000481071.1 | ||
| External Link | RMBase: m6A_site_518438 | ||
| mod ID: M6ASITE050645 | Click to Show/Hide the Full List | ||
| mod site | chr2:241223925-241223926:+ | [3] | |
| Sequence | TTCTTTTTGGAACGAACGGAACAAAGGATGAGCAGCCCGAG | ||
| Motif Score | 2.951386905 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; hESC-HEK293T; H1A; H1B; hESCs; GM12878; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP | ||
| Transcript ID List | ENST00000481071.1; ENST00000459928.1; ENST00000487192.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518439 | ||
| mod ID: M6ASITE050646 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224111-241224112:+ | [3] | |
| Sequence | CCCAGCTCAGCTCCCACTGGACACCCTTCACGGTTCCCAAG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; A549; H1A; H1B; HEK293A-TOA; iSLK; TIME; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000274979.12; ENST00000487192.1; ENST00000459928.1; ENST00000481071.1 | ||
| External Link | RMBase: m6A_site_518440 | ||
| mod ID: M6ASITE050647 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224164-241224165:+ | [3] | |
| Sequence | CAGCAGTGACGCCTGGAAGGACATCTGGTGGTCCTTAGGGG | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; HepG2; HEK293T; H1A; H1B; iSLK; TIME; MSC | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000481071.1; ENST00000274979.12; ENST00000487192.1; ENST00000459928.1 | ||
| External Link | RMBase: m6A_site_518441 | ||
| mod ID: M6ASITE050648 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224250-241224251:+ | [3] | |
| Sequence | CTCAGGCAGCGGCTGTGTGAACCGCTGGCTGCTGTTGTGCC | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; HepG2; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000487192.1; ENST00000481071.1; ENST00000274979.12; ENST00000459928.1 | ||
| External Link | RMBase: m6A_site_518442 | ||
| mod ID: M6ASITE050649 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224355-241224356:+ | [3] | |
| Sequence | TCCATCCCCGGCAGGGAGGGACCGTCAGCTCACAAGGCCCT | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; HEK293T; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000481071.1; ENST00000487192.1; ENST00000274979.12; ENST00000459928.1 | ||
| External Link | RMBase: m6A_site_518443 | ||
| mod ID: M6ASITE050650 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224395-241224396:+ | [3] | |
| Sequence | TCTTTGTTTCCTGCTCCCAGACATAAGCCCAAGGGGCCCCT | ||
| Motif Score | 2.897386905 | ||
| Cell/Tissue List | HeLa; HEK293T; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000487192.1; ENST00000459928.1; ENST00000481071.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518444 | ||
| mod ID: M6ASITE050651 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224427-241224428:+ | [3] | |
| Sequence | GGGGCCCCTGCACCCAAGGGACCCTGTCCCTCGGTGGCCTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000459928.1; ENST00000481071.1; ENST00000487192.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518445 | ||
| mod ID: M6ASITE050652 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224461-241224462:+ | [3] | |
| Sequence | TGGCCTCCCCAGGCCCCTGGACACGACAGTTCTCCTCAGGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000459928.1; ENST00000487192.1; ENST00000481071.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518446 | ||
| mod ID: M6ASITE050653 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224592-241224593:+ | [3] | |
| Sequence | TTCTCCCTCGTGTCCTCTGGACCCACCCGCCCCTTCCTGCC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; MT4; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000481071.1; ENST00000487192.1; ENST00000274979.12; ENST00000459928.1 | ||
| External Link | RMBase: m6A_site_518447 | ||
| mod ID: M6ASITE050654 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224627-241224628:+ | [3] | |
| Sequence | CCTGCCCTGTTTGCGCAGGGACATCACCCACATGCCCCAGC | ||
| Motif Score | 3.643047619 | ||
| Cell/Tissue List | HeLa; hESCs; MT4; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000487192.1; ENST00000481071.1; ENST00000459928.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518448 | ||
| mod ID: M6ASITE050655 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224654-241224655:+ | [3] | |
| Sequence | CCACATGCCCCAGCTCTCGGACCCTGCAGCTCTGTGTCCCA | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | HeLa; hESCs; MT4; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000487192.1; ENST00000481071.1; ENST00000459928.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518449 | ||
| mod ID: M6ASITE050656 | Click to Show/Hide the Full List | ||
| mod site | chr2:241224697-241224698:+ | [3] | |
| Sequence | CCACAGCAAAGGTCTGTTGAACCCCTCCCTCCATTCCCAGT | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000487192.1; ENST00000459928.1; ENST00000481071.1; ENST00000274979.12 | ||
| External Link | RMBase: m6A_site_518450 | ||
| mod ID: M6ASITE050657 | Click to Show/Hide the Full List | ||
| mod site | chr2:241225278-241225279:+ | [4] | |
| Sequence | CTCACACCTGTAATCCCAGGACTTTGGGAGGCTGAGGCAGG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HepG2; H1B; Huh7; HEK293A-TOA; iSLK; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | rmsk_863082; ENST00000274979.12; ENST00000459928.1 | ||
| External Link | RMBase: m6A_site_518451 | ||
| mod ID: M6ASITE050658 | Click to Show/Hide the Full List | ||
| mod site | chr2:241225324-241225325:+ | [4] | |
| Sequence | TACAAGGTCAGGAGTTCGGGACTAGCCTGTCCAACATGGTG | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HepG2; H1B; HEK293A-TOA; iSLK; MSC; TIME | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000274979.12; ENST00000459928.1; rmsk_863082 | ||
| External Link | RMBase: m6A_site_518452 | ||
| mod ID: M6ASITE050659 | Click to Show/Hide the Full List | ||
| mod site | chr2:241225347-241225348:+ | [4] | |
| Sequence | AGCCTGTCCAACATGGTGAAACCCTGTCTTTACTAAAAATG | ||
| Motif Score | 2.185083333 | ||
| Cell/Tissue List | HepG2; H1B; MSC; TIME; iSLK | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000459928.1; ENST00000274979.12; rmsk_863082 | ||
| External Link | RMBase: m6A_site_518453 | ||
References