m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR01689)
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: RNA demethylase ALKBH5 (ALKBH5)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05059 | ||
| Epigenetic Regulator | Circ_STAG1 | |
| Regulated Target | RNA demethylase ALKBH5 (ALKBH5) | |
| Crosstalk relationship | ncRNA → m6A | |
| Disease | Major depressive disorder | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01689)
| In total 3 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE007697 | Click to Show/Hide the Full List | ||
| mod site | chr1:46407116-46407117:+ | [2] | |
| Sequence | TACGTGAGCCAGGGTCTGCAAGCAGCGTGGTGTGCTGCTCC | ||
| Transcript ID List | ENST00000243167.9; ENST00000489366.2; ENST00000493735.5; ENST00000484697.5 | ||
| External Link | RMBase: RNA-editing_site_5430 | ||
| mod ID: A2ISITE007698 | Click to Show/Hide the Full List | ||
| mod site | chr1:46408186-46408187:+ | [2] | |
| Sequence | CTTGTCACTCTGCATTGGGTAGCTTTGGGCAAGTCCCAGTC | ||
| Transcript ID List | ENST00000489366.2; rmsk_107861; ENST00000484697.5; ENST00000243167.9; ENST00000493735.5 | ||
| External Link | RMBase: RNA-editing_site_5431 | ||
| mod ID: A2ISITE007699 | Click to Show/Hide the Full List | ||
| mod site | chr1:46409291-46409292:+ | [2] | |
| Sequence | GTGATGCCTGGATGGGCCTTAGCTGAATCCAACAAAGGCCT | ||
| Transcript ID List | ENST00000243167.9; ENST00000484697.5 | ||
| External Link | RMBase: RNA-editing_site_5432 | ||
N6-methyladenosine (m6A)
| In total 11 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE024247 | Click to Show/Hide the Full List | ||
| mod site | chr1:46405378-46405379:+ | [3] | |
| Sequence | TCCCTCCTCCCAGGGCCAGGACTCCACGCTGGGCTTGAGCC | ||
| Motif Score | 4.065041667 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000243167.9; ENST00000468718.5; ENST00000493735.5 | ||
| External Link | RMBase: m6A_site_28986 | ||
| mod ID: M6ASITE024248 | Click to Show/Hide the Full List | ||
| mod site | chr1:46405477-46405478:+ | [4] | |
| Sequence | GGGTGCCGTGCCCTTCGTGCACACCAATGTTCCACAGTCCA | ||
| Motif Score | 2.830589286 | ||
| Cell/Tissue List | brain | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000493735.5; ENST00000243167.9; ENST00000468718.5 | ||
| External Link | RMBase: m6A_site_28987 | ||
| mod ID: M6ASITE024249 | Click to Show/Hide the Full List | ||
| mod site | chr1:46405618-46405619:+ | [3] | |
| Sequence | GTAACCCCCTCTTTGGCCAGACCGTGAACCCATGGAAGTCC | ||
| Motif Score | 2.876744048 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000468718.5; ENST00000243167.9; ENST00000493735.5 | ||
| External Link | RMBase: m6A_site_28988 | ||
| mod ID: M6ASITE024250 | Click to Show/Hide the Full List | ||
| mod site | chr1:46405625-46405626:+ | [3] | |
| Sequence | CCTCTTTGGCCAGACCGTGAACCCATGGAAGTCCTCCAAAA | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000468718.5; ENST00000493735.5; ENST00000243167.9 | ||
| External Link | RMBase: m6A_site_28989 | ||
| mod ID: M6ASITE024251 | Click to Show/Hide the Full List | ||
| mod site | chr1:46405777-46405778:+ | [4] | |
| Sequence | GCATCTGCGGCCTCAAGCCCACAGGGAACCGCCTCAGGTAA | ||
| Motif Score | 2.053113095 | ||
| Cell/Tissue List | kidney | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000484697.5; ENST00000493735.5; ENST00000468718.5; ENST00000243167.9 | ||
| External Link | RMBase: m6A_site_28990 | ||
| mod ID: M6ASITE024252 | Click to Show/Hide the Full List | ||
| mod site | chr1:46408556-46408557:+ | [4] | |
| Sequence | CGGGCCGTGCTGGAGACCAAACAGAGCCTTGAGGCTGCGGG | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | brain; kidney | ||
| Seq Type List | m6A-REF-seq | ||
| Transcript ID List | ENST00000484697.5; ENST00000493735.5; ENST00000489366.2; ENST00000243167.9 | ||
| External Link | RMBase: m6A_site_28991 | ||
| mod ID: M6ASITE024253 | Click to Show/Hide the Full List | ||
| mod site | chr1:46410841-46410842:+ | [5] | |
| Sequence | GCTGTCAGCTTTCCTCAGCAACATGAAGTCTCGGTAAGGGT | ||
| Motif Score | 2.173910714 | ||
| Cell/Tissue List | hESC-HEK293T | ||
| Seq Type List | MAZTER-seq | ||
| Transcript ID List | ENST00000243167.9; ENST00000493636.1; ENST00000484697.5 | ||
| External Link | RMBase: m6A_site_28992 | ||
| mod ID: M6ASITE024254 | Click to Show/Hide the Full List | ||
| mod site | chr1:46413593-46413594:+ | [6] | |
| Sequence | GATGGCTCTGGCTCCAGAGGACCTGAGACTCACACTCTCTG | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | MM6; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000484697.5; ENST00000243167.9 | ||
| External Link | RMBase: m6A_site_28993 | ||
| mod ID: M6ASITE024255 | Click to Show/Hide the Full List | ||
| mod site | chr1:46413600-46413601:+ | [6] | |
| Sequence | CTGGCTCCAGAGGACCTGAGACTCACACTCTCTGCAGCCCA | ||
| Motif Score | 3.319380952 | ||
| Cell/Tissue List | MM6; HEC-1-A | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000243167.9; ENST00000484697.5 | ||
| External Link | RMBase: m6A_site_28994 | ||
| mod ID: M6ASITE024256 | Click to Show/Hide the Full List | ||
| mod site | chr1:46413738-46413739:+ | [6] | |
| Sequence | CGCCGACTCCCTGAGTCTGGACCTCCATCCCTGCTCTGGTC | ||
| Motif Score | 3.622404762 | ||
| Cell/Tissue List | MM6; Huh7; HEK293A-TOA; HEC-1-A | ||
| Seq Type List | m6A-seq; MeRIP-seq | ||
| Transcript ID List | ENST00000243167.9; ENST00000484697.5 | ||
| External Link | RMBase: m6A_site_28995 | ||
| mod ID: M6ASITE024257 | Click to Show/Hide the Full List | ||
| mod site | chr1:46413842-46413843:+ | [7] | |
| Sequence | GCCCAACTAACAGTCAAGAAACAGCTCCTCGTCTGTGTGGT | ||
| Motif Score | 2.20572619 | ||
| Cell/Tissue List | Huh7; peripheral-blood; HEK293A-TOA; HEC-1-A | ||
| Seq Type List | MeRIP-seq; m6A-seq | ||
| Transcript ID List | ENST00000484697.5; ENST00000243167.9 | ||
| External Link | RMBase: m6A_site_28996 | ||
References