General Information of the m6A Target Gene (ID: M6ATAR01531)
Target Name Nuclear transcription factor Y subunit alpha (NFYA)
Synonyms
CAAT box DNA-binding protein subunit A; Nuclear transcription factor Y subunit A; NF-YA
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Gene Name NFYA
Chromosomal Location 6p21.1
Family NFYA/HAP2 subunit family
Function
Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes. NF-Y can function as both an activator and a repressor, depending on its interacting cofactors. NF-YA positively regulates the transcription of the core clock component BMAL1.
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Gene ID 4800
Uniprot ID
NFYA_HUMAN
HGNC ID
HGNC:7804
KEGG ID
hsa:4800
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
RNA modification
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2BP2)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT00058
Epigenetic Regulator rRNA 2'-O-methyltransferase fibrillarin (FBL)
Regulated Target Insulin like growth factor 2 mRNA binding protein 2 (IGF2BP2)
Crosstalk relationship 2'-O-methylation → m6A
Disease Ovarian cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01531)
Nuclear transcription factor Y subunit alpha (NFYA)
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE001447 Click to Show/Hide the Full List
mod site chr6:41088634-41088635:+ [2]
Sequence GCTCTGTTGCCTAGGCTGGAATGCAGTGGTGCGGATCTTGG
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: RNA-editing_site_116016
5-methylcytidine (m5C)
In total 6 m6A sequence/site(s) in this target gene
mod ID: M5CSITE003938 Click to Show/Hide the Full List
mod site chr6:41073404-41073405:+ [3]
Sequence CTCAGGCCCAGGTTCTCAGGCCCCAGGCCTGGGGCCACGAA
Seq Type List Bisulfite-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m5C_site_37957
mod ID: M5CSITE003939 Click to Show/Hide the Full List
mod site chr6:41073405-41073406:+ [3]
Sequence TCAGGCCCAGGTTCTCAGGCCCCAGGCCTGGGGCCACGAAT
Seq Type List Bisulfite-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m5C_site_37958
mod ID: M5CSITE003940 Click to Show/Hide the Full List
mod site chr6:41073406-41073407:+ [3]
Sequence CAGGCCCAGGTTCTCAGGCCCCAGGCCTGGGGCCACGAATG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m5C_site_37959
mod ID: M5CSITE003942 Click to Show/Hide the Full List
mod site chr6:41073407-41073408:+ [3]
Sequence AGGCCCAGGTTCTCAGGCCCCAGGCCTGGGGCCACGAATGG
Seq Type List Bisulfite-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m5C_site_37960
mod ID: M5CSITE003943 Click to Show/Hide the Full List
mod site chr6:41099000-41099001:+
Sequence AATTGGTTCTTCTTTGACTTCAGCTTAACTGTATTAAGACA
Cell/Tissue List T24
Seq Type List Bisulfite-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m5C_site_37961
mod ID: M5CSITE003944 Click to Show/Hide the Full List
mod site chr6:41099101-41099102:+ [3]
Sequence ACAGAGCTATGCAAAGGAAACAGGAAGTGAAATATTCCTAG
Cell/Tissue List HeLa; T24
Seq Type List m5C-RIP-seq; Bisulfite-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m5C_site_37962
N6-methyladenosine (m6A)
In total 79 m6A sequence/site(s) in this target gene
mod ID: M6ASITE074969 Click to Show/Hide the Full List
mod site chr6:41073065-41073066:+ [4]
Sequence CCAATCAGCGCGGGCAGCGAACCGGGGGAGCGAGGCACGGT
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; U2OS; MT4; peripheral-blood; GSC-11; HEK293T; MSC; iSLK; endometrial; HEC-1-A
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716257
mod ID: M6ASITE074970 Click to Show/Hide the Full List
mod site chr6:41079065-41079066:+ [4]
Sequence TTCTAGGATCTCCAGAGTGGACAGGAATCTCACTTGGAGGG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; U2OS; MT4; Huh7; peripheral-blood; GSC-11; HEK293T; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716259
mod ID: M6ASITE074971 Click to Show/Hide the Full List
mod site chr6:41079086-41079087:+ [5]
Sequence CAGGAATCTCACTTGGAGGGACCATGGAGCAGTATACAGCA
Motif Score 3.622404762
Cell/Tissue List HepG2; U2OS; MT4; peripheral-blood; GSC-11; HEK293T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716260
mod ID: M6ASITE074972 Click to Show/Hide the Full List
mod site chr6:41079108-41079109:+ [6]
Sequence CATGGAGCAGTATACAGCAAACAGCAATAGTTCGACAGAGC
Motif Score 2.20572619
Cell/Tissue List U2OS; MT4; peripheral-blood
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716261
mod ID: M6ASITE074973 Click to Show/Hide the Full List
mod site chr6:41079148-41079149:+ [7]
Sequence CAGATTGTTGTCCAGGCAGGACAGATTCAGCAGCAGGTATG
Motif Score 3.643047619
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716262
mod ID: M6ASITE074974 Click to Show/Hide the Full List
mod site chr6:41080843-41080844:+ [7]
Sequence TCACTGCTGTGCAGTTGCAGACTGAGGCCCAGGTGGCATCC
Motif Score 3.319380952
Cell/Tissue List MT4
Seq Type List MeRIP-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716263
mod ID: M6ASITE074975 Click to Show/Hide the Full List
mod site chr6:41084093-41084094:+ [8]
Sequence TCAGTGGAGGCCAGCTAATCACATCAACTGGCCAACCCATC
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716264
mod ID: M6ASITE074976 Click to Show/Hide the Full List
mod site chr6:41084137-41084138:+ [8]
Sequence GTCCAGGCTGTCCCTGGTGGACAAGGTCAAACCATCATGCA
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716265
mod ID: M6ASITE074977 Click to Show/Hide the Full List
mod site chr6:41089598-41089599:+ [5]
Sequence ATACAGTTGGTCCCACCTGGACAGATCCAGATCCAGGGTGG
Motif Score 3.643047619
Cell/Tissue List HepG2; HEK293T
Seq Type List m6A-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716266
mod ID: M6ASITE074978 Click to Show/Hide the Full List
mod site chr6:41089619-41089620:+ [5]
Sequence CAGATCCAGATCCAGGGTGGACAGGCTGTGCAGGTGCAGGG
Motif Score 3.643047619
Cell/Tissue List HepG2; Huh7; CD4T; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716267
mod ID: M6ASITE074979 Click to Show/Hide the Full List
mod site chr6:41089653-41089654:+ [5]
Sequence TGCAGGGCCAGCAGGGCCAGACCCAGCAGATCATCATCCAG
Motif Score 2.876744048
Cell/Tissue List HepG2; Huh7; Jurkat; CD4T; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716268
mod ID: M6ASITE074980 Click to Show/Hide the Full List
mod site chr6:41089704-41089705:+ [5]
Sequence CGGCTGTCACTGCTGGCCAGACTCAGGTAATTCCACTAGCT
Motif Score 3.319380952
Cell/Tissue List HepG2; Huh7; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716269
mod ID: M6ASITE074981 Click to Show/Hide the Full List
mod site chr6:41090203-41090204:+ [8]
Sequence TCATTACTTATTTCCTCCAGACACAGCAGCAGATTGCTGTC
Motif Score 2.897386905
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716270
mod ID: M6ASITE074982 Click to Show/Hide the Full List
mod site chr6:41090229-41090230:+ [5]
Sequence CAGCAGATTGCTGTCCAGGGACAGCAAGTGGCACAGACTGC
Motif Score 3.643047619
Cell/Tissue List HepG2; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716271
mod ID: M6ASITE074983 Click to Show/Hide the Full List
mod site chr6:41090245-41090246:+ [5]
Sequence AGGGACAGCAAGTGGCACAGACTGCTGAAGGGCAGACCATC
Motif Score 3.319380952
Cell/Tissue List HepG2; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716272
mod ID: M6ASITE074984 Click to Show/Hide the Full List
mod site chr6:41090260-41090261:+ [5]
Sequence CACAGACTGCTGAAGGGCAGACCATCGTCTATCAACCAGTT
Motif Score 2.876744048
Cell/Tissue List HepG2; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4; MM6
Seq Type List m6A-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716273
mod ID: M6ASITE074985 Click to Show/Hide the Full List
mod site chr6:41091646-41091647:+ [8]
Sequence GGCAAGGGACTGTCACTGTGACACTACCAGTGGCAGGCAAT
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716274
mod ID: M6ASITE074986 Click to Show/Hide the Full List
mod site chr6:41093006-41093007:+ [4]
Sequence CCTCTCTACGTGAATGCCAAACAATACCACCGTATTCTTAA
Motif Score 2.20572619
Cell/Tissue List HeLa; CD34; hESC-HEK293T
Seq Type List m6A-seq; MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716275
mod ID: M6ASITE074987 Click to Show/Hide the Full List
mod site chr6:41093048-41093049:+ [4]
Sequence AGGAGGCAAGCCCGAGCTAAACTAGAGGCAGAAGGGAAAAT
Motif Score 2.627720238
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716276
mod ID: M6ASITE074988 Click to Show/Hide the Full List
mod site chr6:41097486-41097487:+ [8]
Sequence TGATCAACTCTTCCAATGGGACATTGATGATCACATTCTGC
Motif Score 3.643047619
Cell/Tissue List HEK293T; hESC-HEK293T; HepG2; HeLa; U2OS; A549; CD8T; HEK293A-TOA
Seq Type List MeRIP-seq; MAZTER-seq; m6A-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716277
mod ID: M6ASITE074989 Click to Show/Hide the Full List
mod site chr6:41097520-41097521:+ [9]
Sequence ATTCTGCCCTTTACTACAGGACAGAAACCACTTAGTTTTTA
Motif Score 3.643047619
Cell/Tissue List HEK293T; HepG2; HeLa; U2OS; A549; HEK293A-TOA
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716278
mod ID: M6ASITE074990 Click to Show/Hide the Full List
mod site chr6:41097526-41097527:+ [9]
Sequence CCCTTTACTACAGGACAGAAACCACTTAGTTTTTAATAAGT
Motif Score 2.185083333
Cell/Tissue List HEK293T; HepG2; HeLa; U2OS; A549; HEK293A-TOA
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716279
mod ID: M6ASITE074991 Click to Show/Hide the Full List
mod site chr6:41097558-41097559:+ [8]
Sequence TTAATAAGTGGCTCAGTATTACAATTGCAGCGATGCCTGGC
Motif Score 2.07285119
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716280
mod ID: M6ASITE074992 Click to Show/Hide the Full List
mod site chr6:41097605-41097606:+ [10]
Sequence AAGTTGCAAGCCTTTGTCTTACTCTTTCAGTCAGGACCTAT
Motif Score 2.494845238
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716281
mod ID: M6ASITE074993 Click to Show/Hide the Full List
mod site chr6:41097620-41097621:+ [4]
Sequence GTCTTACTCTTTCAGTCAGGACCTATTTCAGACTGTTGATG
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716282
mod ID: M6ASITE074994 Click to Show/Hide the Full List
mod site chr6:41097631-41097632:+ [4]
Sequence TCAGTCAGGACCTATTTCAGACTGTTGATGACATTGACATT
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; AML
Seq Type List m6A-seq; MeRIP-seq; miCLIP
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716283
mod ID: M6ASITE074995 Click to Show/Hide the Full List
mod site chr6:41097641-41097642:+ [8]
Sequence CCTATTTCAGACTGTTGATGACATTGACATTTCATGGATTC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T; CD8T
Seq Type List MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716284
mod ID: M6ASITE074996 Click to Show/Hide the Full List
mod site chr6:41097647-41097648:+ [10]
Sequence TCAGACTGTTGATGACATTGACATTTCATGGATTCGGATGA
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T; CD8T
Seq Type List DART-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716285
mod ID: M6ASITE074997 Click to Show/Hide the Full List
mod site chr6:41097677-41097678:+ [4]
Sequence GATTCGGATGATGCAAGGAGACACATGCCACCCCAGCAGTA
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MT4; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716286
mod ID: M6ASITE074998 Click to Show/Hide the Full List
mod site chr6:41097752-41097753:+ [4]
Sequence AGCCATCTCAGCAGGGAAGAACAACCTTCTCAACCAAAACT
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716287
mod ID: M6ASITE074999 Click to Show/Hide the Full List
mod site chr6:41097770-41097771:+ [4]
Sequence GAACAACCTTCTCAACCAAAACTGCAATCAGGAAAGCAGCA
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000353205.5; ENST00000341376.10
External Link RMBase: m6A_site_716288
mod ID: M6ASITE075000 Click to Show/Hide the Full List
mod site chr6:41097816-41097817:+ [4]
Sequence CTCCTTCCCATGGAATCTAGACAGCATTTATCCCTCTGGTG
Motif Score 2.897386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716289
mod ID: M6ASITE075001 Click to Show/Hide the Full List
mod site chr6:41097847-41097848:+ [8]
Sequence CCCTCTGGTGGGGGAATCTCACACTGACTAACTGAATGGAC
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716290
mod ID: M6ASITE075002 Click to Show/Hide the Full List
mod site chr6:41097853-41097854:+ [10]
Sequence GGTGGGGGAATCTCACACTGACTAACTGAATGGACGCTTTG
Motif Score 3.28175
Cell/Tissue List HEK293T; A549
Seq Type List DART-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716291
mod ID: M6ASITE075003 Click to Show/Hide the Full List
mod site chr6:41097923-41097924:+ [4]
Sequence TTCTATCTTGTGATACGGAAACAATAAATTCCTGAGATACA
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716292
mod ID: M6ASITE075004 Click to Show/Hide the Full List
mod site chr6:41097941-41097942:+ [8]
Sequence AAACAATAAATTCCTGAGATACATTCTTCCAATCTGTGGTA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10; ENST00000353205.5
External Link RMBase: m6A_site_716293
mod ID: M6ASITE075005 Click to Show/Hide the Full List
mod site chr6:41098008-41098009:+ [4]
Sequence TGGTAGGTTGATATTTCTGGACTCTAGCCAAGAAAAAGCTA
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716294
mod ID: M6ASITE075006 Click to Show/Hide the Full List
mod site chr6:41098053-41098054:+ [4]
Sequence TGGGGATAGAATGATAAAAGACTCAAGCACTAAAAATATAC
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716295
mod ID: M6ASITE075007 Click to Show/Hide the Full List
mod site chr6:41098072-41098073:+ [8]
Sequence GACTCAAGCACTAAAAATATACATTGCCGAATCTCTTTTTC
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716296
mod ID: M6ASITE075008 Click to Show/Hide the Full List
mod site chr6:41098144-41098145:+ [4]
Sequence TCTGTTGACTGGTCATCTGGACCATCGTACTTGCTGTGGCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716297
mod ID: M6ASITE075009 Click to Show/Hide the Full List
mod site chr6:41098174-41098175:+ [4]
Sequence TTGCTGTGGCTACTTCTAAGACAATGTAGAGGGTTATTAAA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; brain; A549; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716298
mod ID: M6ASITE075010 Click to Show/Hide the Full List
mod site chr6:41098194-41098195:+ [4]
Sequence ACAATGTAGAGGGTTATTAAACCTTGAAACTGCCTTTCCTA
Motif Score 2.185083333
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716299
mod ID: M6ASITE075012 Click to Show/Hide the Full List
mod site chr6:41098202-41098203:+ [4]
Sequence GAGGGTTATTAAACCTTGAAACTGCCTTTCCTAAGTAGAGA
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716300
mod ID: M6ASITE075013 Click to Show/Hide the Full List
mod site chr6:41098223-41098224:+ [4]
Sequence CTGCCTTTCCTAAGTAGAGAACAAGACTATTCAACAACTTC
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716301
mod ID: M6ASITE075014 Click to Show/Hide the Full List
mod site chr6:41098228-41098229:+ [4]
Sequence TTTCCTAAGTAGAGAACAAGACTATTCAACAACTTCTTTGC
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716302
mod ID: M6ASITE075015 Click to Show/Hide the Full List
mod site chr6:41098236-41098237:+ [8]
Sequence GTAGAGAACAAGACTATTCAACAACTTCTTTGCTGAAGCAC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716303
mod ID: M6ASITE075016 Click to Show/Hide the Full List
mod site chr6:41098293-41098294:+ [4]
Sequence ACTCCTAAAGGAAGGGCCAAACTAGAGATTTTCAATCATAG
Motif Score 2.627720238
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716304
mod ID: M6ASITE075017 Click to Show/Hide the Full List
mod site chr6:41098314-41098315:+ [4]
Sequence CTAGAGATTTTCAATCATAGACTTTGTGACAGCATTTGGGG
Motif Score 3.319380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; CD8T; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716305
mod ID: M6ASITE075018 Click to Show/Hide the Full List
mod site chr6:41098322-41098323:+ [10]
Sequence TTTCAATCATAGACTTTGTGACAGCATTTGGGGAACTAAAA
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T; A549
Seq Type List DART-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716306
mod ID: M6ASITE075019 Click to Show/Hide the Full List
mod site chr6:41098336-41098337:+ [4]
Sequence TTTGTGACAGCATTTGGGGAACTAAAAGATTCATGTGTTTC
Motif Score 3.373380952
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; DART-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716307
mod ID: M6ASITE075020 Click to Show/Hide the Full List
mod site chr6:41098485-41098486:+ [8]
Sequence TAAGATGAAGAGAGTAATTCACATTTACTCTAGAACCTTTA
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716308
mod ID: M6ASITE075021 Click to Show/Hide the Full List
mod site chr6:41098499-41098500:+ [4]
Sequence TAATTCACATTTACTCTAGAACCTTTAACAAGCACTGAAAG
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; hNPCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716309
mod ID: M6ASITE075022 Click to Show/Hide the Full List
mod site chr6:41098545-41098546:+ [8]
Sequence AGCCTGAGATTTGATCCTTGACAATTTCTGGAAAGCACTGG
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T; CD8T
Seq Type List MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716310
mod ID: M6ASITE075023 Click to Show/Hide the Full List
mod site chr6:41098584-41098585:+ [4]
Sequence GGTCAGTCACACTGTCCTGGACAGAGTCCAAGTTACCCACT
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; A549; hESC-HEK293T; HepG2; U2OS; hNPCs; GM12878; LCLs; Huh7; Jurkat; peripheral-blood; iSLK; TIME; MSC; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716311
mod ID: M6ASITE075024 Click to Show/Hide the Full List
mod site chr6:41098641-41098642:+ [8]
Sequence GTTGGCTTCACTCCTGCAGCACAATGCTGGCCCTAGAAAGC
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716312
mod ID: M6ASITE075025 Click to Show/Hide the Full List
mod site chr6:41098773-41098774:+ [4]
Sequence CATCCATACTGTGAGAATAAACTGCAGACTGAAAGAAACAT
Motif Score 2.627720238
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; CD8T; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716313
mod ID: M6ASITE075026 Click to Show/Hide the Full List
mod site chr6:41098780-41098781:+ [4]
Sequence ACTGTGAGAATAAACTGCAGACTGAAAGAAACATGCCTGCA
Motif Score 3.319380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716314
mod ID: M6ASITE075027 Click to Show/Hide the Full List
mod site chr6:41098790-41098791:+ [4]
Sequence TAAACTGCAGACTGAAAGAAACATGCCTGCAGGGTCAGGAA
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; GSCs; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716315
mod ID: M6ASITE075028 Click to Show/Hide the Full List
mod site chr6:41098810-41098811:+ [4]
Sequence ACATGCCTGCAGGGTCAGGAACTGGGCCACTGTTCCCAGAA
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; GSCs; NB4; AML
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP; miCLIP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716316
mod ID: M6ASITE075029 Click to Show/Hide the Full List
mod site chr6:41098818-41098819:+ [10]
Sequence GCAGGGTCAGGAACTGGGCCACTGTTCCCAGAACGGGTTGT
Motif Score 2.475107143
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716317
mod ID: M6ASITE075030 Click to Show/Hide the Full List
mod site chr6:41098872-41098873:+ [4]
Sequence ATTTCTCTTTTAGATGTTGAACCCTGAGAGAACTAAGATGA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716318
mod ID: M6ASITE075031 Click to Show/Hide the Full List
mod site chr6:41098883-41098884:+ [4]
Sequence AGATGTTGAACCCTGAGAGAACTAAGATGATATTTCAGAAG
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716319
mod ID: M6ASITE075032 Click to Show/Hide the Full List
mod site chr6:41098925-41098926:+ [4]
Sequence GTTGGCTGCCTTCTCTGGAAACAAGGAAAACCCAATAATTC
Motif Score 2.20572619
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716320
mod ID: M6ASITE075033 Click to Show/Hide the Full List
mod site chr6:41098934-41098935:+ [4]
Sequence CTTCTCTGGAAACAAGGAAAACCCAATAATTCCGAGGAACA
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716321
mod ID: M6ASITE075034 Click to Show/Hide the Full List
mod site chr6:41098952-41098953:+ [4]
Sequence AAACCCAATAATTCCGAGGAACATTGGGGGTTAAATACCAA
Motif Score 2.951386905
Cell/Tissue List HeLa; HepG2; HEK293T; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; CD8T; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716322
mod ID: M6ASITE075035 Click to Show/Hide the Full List
mod site chr6:41099018-41099019:+ [11]
Sequence TTCAGCTTAACTGTATTAAGACAGAAATTAAGCCCTCTAAA
Motif Score 2.897386905
Cell/Tissue List HepG2; HEK293T; HeLa; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716323
mod ID: M6ASITE075036 Click to Show/Hide the Full List
mod site chr6:41099040-41099041:+ [11]
Sequence AGAAATTAAGCCCTCTAAAAACACCACAAAGAGAGATGATT
Motif Score 2.20572619
Cell/Tissue List HepG2; HEK293T; HeLa; hNPCs; fibroblasts; A549; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716324
mod ID: M6ASITE075037 Click to Show/Hide the Full List
mod site chr6:41099100-41099101:+ [12]
Sequence TACAGAGCTATGCAAAGGAAACAGGAAGTGAAATATTCCTA
Motif Score 2.20572619
Cell/Tissue List HEK293T; HeLa; hNPCs; GM12878; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716325
mod ID: M6ASITE075038 Click to Show/Hide the Full List
mod site chr6:41099166-41099167:+ [9]
Sequence TGGCTTCCAGATGTCAAAGGACTGATCCTTTGGTAAGCTCA
Motif Score 4.065041667
Cell/Tissue List HEK293T; Huh7; iSLK
Seq Type List MeRIP-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716326
mod ID: M6ASITE075039 Click to Show/Hide the Full List
mod site chr6:41099205-41099206:+ [8]
Sequence CACTAGAAACTTCTAGCTCTACAAGAGTTTGGGATATTAAT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716327
mod ID: M6ASITE075040 Click to Show/Hide the Full List
mod site chr6:41099268-41099269:+ [8]
Sequence TTTCAGAGAATAGATTACTAACAATGAGGAATTTATATTCC
Motif Score 2.168095238
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716328
mod ID: M6ASITE075041 Click to Show/Hide the Full List
mod site chr6:41099339-41099340:+ [4]
Sequence TTCAGAAAGAAATTACTCAGACCTAACTTTGAGTGCTTAAG
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716329
mod ID: M6ASITE075042 Click to Show/Hide the Full List
mod site chr6:41099406-41099407:+ [10]
Sequence ATTTGTGTCTGTAAGTTTGTACATAGTAATGCCAGCCTTGT
Motif Score 2.856142857
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716330
mod ID: M6ASITE075043 Click to Show/Hide the Full List
mod site chr6:41099543-41099544:+ [8]
Sequence TTTCTTGTGGTCACTTTGGCACACCATAGTAGCCCACAAAG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716331
mod ID: M6ASITE075044 Click to Show/Hide the Full List
mod site chr6:41099580-41099581:+ [10]
Sequence AAAGTGGGGGCAGGGTATTGACATTTGGATTTTTTCTTTGA
Motif Score 2.859755952
Cell/Tissue List HEK293T; hESC-HEK293T
Seq Type List DART-seq; MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716332
mod ID: M6ASITE075045 Click to Show/Hide the Full List
mod site chr6:41099602-41099603:+ [10]
Sequence ATTTGGATTTTTTCTTTGATACTAGTTCTTTTATTCATTTT
Motif Score 2.53247619
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716333
mod ID: M6ASITE075046 Click to Show/Hide the Full List
mod site chr6:41099631-41099632:+ [10]
Sequence TTTATTCATTTTTATTTGTGACTGTAGTGATAACTTTACAG
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716334
mod ID: M6ASITE075047 Click to Show/Hide the Full List
mod site chr6:41099706-41099707:+ [10]
Sequence GTTTAATGCCTAGTTATGCAACTTGAGTGCTTTTTTTTTTT
Motif Score 2.595904762
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716335
mod ID: M6ASITE075048 Click to Show/Hide the Full List
mod site chr6:41099770-41099771:+ [8]
Sequence TATATTTTAACTGCACTGGTACATTGAACATGTCAGTGTCG
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m6A_site_716336
N7-methylguanosine (m7G)
In total 1 m6A sequence/site(s) in this target gene
mod ID: m7GSITE000109 Click to Show/Hide the Full List
mod site chr6:41099891-41099892:+ [13]
Sequence TATCGAAGGTTTTTCCCCCAGCAGTATGGGGGCGTACAGGT
Cell/Tissue List A549; HeLa; HepG2
Seq Type List BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List ENST00000341376.10
External Link RMBase: m7G_site_786