m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01481)

Target Name	Probable ATP-dependent RNA helicase DDX27 (DDX27)
Synonyms	DEAD box protein 27 Click to Show/Hide
Gene Name	DDX27
Chromosomal Location	20q13.13
Family	DEAD box helicase family, DDX27/DRS1 subfamily
Function	Probable ATP-dependent RNA helicase. Component of the nucleolar ribosomal RNA (rRNA) processing machinery that regulates 3' end formation of ribosomal 47S rRNA (PubMed:25825154). Click to Show/Hide
Gene ID	55661
Uniprot ID	DDX27_HUMAN
HGNC ID	HGNC:15837
KEGG ID	hsa:55661

Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator

Non-coding RNA

m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)

Regulator Info

In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05920		Crosstalk Info
Epigenetic Regulator	Circ_UHRF2
Regulated Target	Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1)
Crosstalk relationship	ncRNA → m6A
Disease	Colorectal cancer	Disease Info

RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01481)

Probable ATP-dependent RNA helicase DDX27 (DDX27)

Adenosine-to-Inosine editing (A-to-I)

In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE010699		Click to Show/Hide the Full List
mod site	chr20:49236958-49236959:+		[2]
Sequence	TAGGCTCAAGCAATCCACCCACCTTCTGCCTCCCAAAGTGC
Transcript ID List	ENST00000371764.8; ENST00000622530.4; ENST00000484427.5; ENST00000618172.4; ENST00000471144.1
External Link	RMBase: RNA-editing_site_88047

N1-methyladenosine (m1A)

In total 1 m6A sequence/site(s) in this target gene
mod ID: M1ASITE000085		Click to Show/Hide the Full List
mod site	chr20:49226451-49226452:+		[3]
Sequence	CATTACAGCCATGGGCTTCAAGCAGCCCACCCCGATCCAGA
Cell/Tissue List	HEK293T
Seq Type List	m1A-seq
Transcript ID List	ENST00000371764.8; ENST00000484427.5; ENST00000493252.2; ENST00000622530.4; ENST00000462328.2; ENST00000618172.4
External Link	RMBase: m1A_site_635

5-methylcytidine (m5C)

In total 1 m6A sequence/site(s) in this target gene
mod ID: M5CSITE002724		Click to Show/Hide the Full List
mod site	chr20:49243866-49243867:+		[4]
Sequence	GAAGAAATTCATGGGGGCAGCCCTTAAATCCCTTCCCTGTG
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000471144.1; ENST00000618172.4; ENST00000484427.5; ENST00000622530.4; ENST00000371764.8
External Link	RMBase: m5C_site_29224

N6-methyladenosine (m6A)

In total 47 m6A sequence/site(s) in this target gene
mod ID: M6ASITE053411		Click to Show/Hide the Full List
mod site	chr20:49219405-49219406:+		[5]
Sequence	TGCGAAAAGTTAAGGGCCGGACCGCAGGCTGTGCTCGCTTC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HEK293A-TOA; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000622530.4; ENST00000371764.8
External Link	RMBase: m6A_site_535566
mod ID: M6ASITE053412		Click to Show/Hide the Full List
mod site	chr20:49219443-49219444:+		[6]
Sequence	TTCCGGAAGTGGCTTCTGCGACAACATGCTTGCGGACCTCG
Motif Score	2.865571429
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000484427.5; ENST00000371764.8; ENST00000622530.4; ENST00000618172.4; ENST00000462328.2
External Link	RMBase: m6A_site_535567
mod ID: M6ASITE053413		Click to Show/Hide the Full List
mod site	chr20:49219446-49219447:+		[6]
Sequence	CGGAAGTGGCTTCTGCGACAACATGCTTGCGGACCTCGGCT
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000618172.4; ENST00000371764.8; ENST00000622530.4; ENST00000462328.2; ENST00000484427.5
External Link	RMBase: m6A_site_535568
mod ID: M6ASITE053414		Click to Show/Hide the Full List
mod site	chr20:49219458-49219459:+		[5]
Sequence	CTGCGACAACATGCTTGCGGACCTCGGCTTAATCGGAACCA
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; MT4; MM6; Huh7; peripheral-blood; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000618172.4; ENST00000622530.4; ENST00000462328.2; ENST00000371764.8
External Link	RMBase: m6A_site_535569
mod ID: M6ASITE053415		Click to Show/Hide the Full List
mod site	chr20:49219475-49219476:+		[5]
Sequence	CGGACCTCGGCTTAATCGGAACCATAGGCGAGGATGACGAG
Motif Score	2.930744048
Cell/Tissue List	HeLa; HepG2; MT4; MM6; Huh7; peripheral-blood; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000622530.4; ENST00000618172.4; ENST00000462328.2; ENST00000371764.8
External Link	RMBase: m6A_site_535570
mod ID: M6ASITE053416		Click to Show/Hide the Full List
mod site	chr20:49221474-49221475:+		[6]
Sequence	CCCATTGTGCTGGGCAGACGACAAAAAGCTTTGGGGAAGAA
Motif Score	2.865571429
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000618172.4; ENST00000622530.4; ENST00000462328.2; ENST00000484427.5; ENST00000371764.8
External Link	RMBase: m6A_site_535571
mod ID: M6ASITE053417		Click to Show/Hide the Full List
mod site	chr20:49221494-49221495:+		[5]
Sequence	ACAAAAAGCTTTGGGGAAGAACCGCAGTGCTGATTTCAACC
Motif Score	2.930744048
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; MT4; MM6; Huh7; peripheral-blood; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000618172.4; ENST00000371764.8; ENST00000484427.5; ENST00000462328.2; ENST00000622530.4
External Link	RMBase: m6A_site_535572
mod ID: M6ASITE053418		Click to Show/Hide the Full List
mod site	chr20:49222968-49222969:+		[6]
Sequence	ATCTGCAGAGGGCAGCCACTACATTAGATGAGAAGATTGAG
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000618172.4; ENST00000484427.5; ENST00000462328.2; ENST00000371764.8; ENST00000622530.4
External Link	RMBase: m6A_site_535573
mod ID: M6ASITE053419		Click to Show/Hide the Full List
mod site	chr20:49223010-49223011:+		[5]
Sequence	AAGTTCGAAAGAAAAGGAAAACAGAGGTGAGAAGAAAAGTG
Motif Score	2.20572619
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; BGC823; hNPCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000622530.4; ENST00000462328.2; ENST00000484427.5; ENST00000618172.4; ENST00000371764.8
External Link	RMBase: m6A_site_535574
mod ID: M6ASITE053420		Click to Show/Hide the Full List
mod site	chr20:49223326-49223327:+		[5]
Sequence	GAAGCAAAGGAAGGCTCTGAACCAAAGGAGCAGGAAGACCT
Motif Score	2.930744048
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; BGC823; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000462328.2; ENST00000371764.8; ENST00000622530.4; ENST00000618172.4
External Link	RMBase: m6A_site_535575
mod ID: M6ASITE053421		Click to Show/Hide the Full List
mod site	chr20:49223343-49223344:+		[5]
Sequence	TGAACCAAAGGAGCAGGAAGACCTTCAAGAGAATGATGAGG
Motif Score	2.876744048
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; BGC823; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000622530.4; ENST00000462328.2; ENST00000484427.5; ENST00000371764.8; ENST00000618172.4
External Link	RMBase: m6A_site_535576
mod ID: M6ASITE053422		Click to Show/Hide the Full List
mod site	chr20:49223390-49223391:+		[5]
Sequence	CAGAAGATGAAGCCTCGGAGACTGACTACTCATCAGCTGAT
Motif Score	3.319380952
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; BGC823; hNPCs; hESCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000622530.4; ENST00000371764.8; ENST00000462328.2; ENST00000618172.4; ENST00000484427.5
External Link	RMBase: m6A_site_535577
mod ID: M6ASITE053423		Click to Show/Hide the Full List
mod site	chr20:49223415-49223416:+		[5]
Sequence	CTACTCATCAGCTGATGAGAACATCCTCACCAAAGCAGGTA
Motif Score	2.951386905
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; hESC-HEK293T; BGC823; hNPCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000484427.5; ENST00000462328.2; ENST00000618172.4; ENST00000371764.8; ENST00000622530.4
External Link	RMBase: m6A_site_535578
mod ID: M6ASITE053424		Click to Show/Hide the Full List
mod site	chr20:49224819-49224820:+		[5]
Sequence	AAAGTGTCCTCATCTGTGAAACAAGGTTGACGATGGTCACC
Motif Score	2.20572619
Cell/Tissue List	HeLa; HepG2; HEK293T; BGC823; hNPCs; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000462328.2; ENST00000622530.4; ENST00000618172.4; ENST00000484427.5; ENST00000371764.8; rmsk_5141789
External Link	RMBase: m6A_site_535579
mod ID: M6ASITE053425		Click to Show/Hide the Full List
mod site	chr20:49224874-49224875:+		[5]
Sequence	GTGTGGCATTGGCACTTAGGACAGTGTCCAGCAGGATGCAA
Motif Score	3.643047619
Cell/Tissue List	HeLa; hNPCs; H1299; Huh7; peripheral-blood
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; rmsk_5141789; ENST00000371764.8; ENST00000462328.2; ENST00000622530.4; ENST00000618172.4
External Link	RMBase: m6A_site_535580
mod ID: M6ASITE053426		Click to Show/Hide the Full List
mod site	chr20:49224946-49224947:+		[6]
Sequence	CTAAGTTTTTCTCCATAGATACACTCAAAGTAAAGGATCGG
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000618172.4; ENST00000462328.2; ENST00000622530.4; ENST00000484427.5; ENST00000371764.8
External Link	RMBase: m6A_site_535581
mod ID: M6ASITE053427		Click to Show/Hide the Full List
mod site	chr20:49224987-49224988:+		[5]
Sequence	AAGAAGAAGAAGAAGAAAGGACAGGTGAGCTTGGGGCTGCA
Motif Score	3.643047619
Cell/Tissue List	HeLa; hNPCs; H1299; Huh7; Jurkat; peripheral-blood; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000618172.4; ENST00000484427.5; ENST00000493252.2; ENST00000622530.4; ENST00000371764.8; ENST00000462328.2
External Link	RMBase: m6A_site_535582
mod ID: M6ASITE053428		Click to Show/Hide the Full List
mod site	chr20:49225155-49225156:+		[5]
Sequence	TGCATCTCAGTACGATGAAAACCTCTCGTTCCAGGACATGA
Motif Score	2.185083333
Cell/Tissue List	HeLa; H1299; Huh7; peripheral-blood; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000462328.2; ENST00000618172.4; ENST00000371764.8; ENST00000493252.2; ENST00000622530.4
External Link	RMBase: m6A_site_535583
mod ID: M6ASITE053429		Click to Show/Hide the Full List
mod site	chr20:49225170-49225171:+		[5]
Sequence	TGAAAACCTCTCGTTCCAGGACATGAACCTTTCCCGCCCTC
Motif Score	3.643047619
Cell/Tissue List	HeLa; hESC-HEK293T; H1299; Huh7; peripheral-blood; endometrial
Seq Type List	m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List	ENST00000462328.2; ENST00000618172.4; ENST00000484427.5; ENST00000371764.8; ENST00000622530.4; ENST00000493252.2
External Link	RMBase: m6A_site_535584
mod ID: M6ASITE053430		Click to Show/Hide the Full List
mod site	chr20:49225176-49225177:+		[5]
Sequence	CCTCTCGTTCCAGGACATGAACCTTTCCCGCCCTCTTCTGA
Motif Score	2.930744048
Cell/Tissue List	HeLa; Huh7; peripheral-blood; endometrial
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000462328.2; ENST00000493252.2; ENST00000484427.5; ENST00000622530.4; ENST00000618172.4; ENST00000371764.8
External Link	RMBase: m6A_site_535585
mod ID: M6ASITE053431		Click to Show/Hide the Full List
mod site	chr20:49226505-49226506:+		[5]
Sequence	TGTGGGTCTATTGGGGAAGGACATCTGTGCCTGTGCAGCCA
Motif Score	3.643047619
Cell/Tissue List	HeLa; hESC-HEK293T
Seq Type List	m6A-seq; MAZTER-seq
Transcript ID List	ENST00000484427.5; ENST00000622530.4; ENST00000493252.2; ENST00000371764.8; ENST00000618172.4
External Link	RMBase: m6A_site_535586
mod ID: M6ASITE053432		Click to Show/Hide the Full List
mod site	chr20:49226531-49226532:+		[5]
Sequence	GTGCCTGTGCAGCCACTGGGACAGGTGAAAAGGATAGGGAC
Motif Score	3.643047619
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000371764.8; ENST00000493252.2; ENST00000484427.5; ENST00000622530.4; ENST00000618172.4
External Link	RMBase: m6A_site_535587
mod ID: M6ASITE053433		Click to Show/Hide the Full List
mod site	chr20:49228719-49228720:+		[5]
Sequence	TGTCCCTCCCTCCAGGTAAAACTGCCGCCTTTGCCCTGCCT
Motif Score	2.627720238
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000493252.2; ENST00000618172.4; ENST00000622530.4; ENST00000371764.8; ENST00000484427.5
External Link	RMBase: m6A_site_535588
mod ID: M6ASITE053434		Click to Show/Hide the Full List
mod site	chr20:49228763-49228764:+		[5]
Sequence	TTGGAGCGTCTGATTTATAAACCCCGCCAGGCTCCAGTCAC
Motif Score	2.185083333
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000371764.8; ENST00000484427.5; ENST00000618172.4; ENST00000622530.4; ENST00000493252.2
External Link	RMBase: m6A_site_535589
mod ID: M6ASITE053435		Click to Show/Hide the Full List
mod site	chr20:49228844-49228845:+		[5]
Sequence	CAGGTGCACTCTGTCACCAGACAGCTGGCCCAGTTCTGCAA
Motif Score	2.897386905
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000622530.4; ENST00000371764.8; ENST00000618172.4; ENST00000493252.2; ENST00000484427.5
External Link	RMBase: m6A_site_535590
mod ID: M6ASITE053436		Click to Show/Hide the Full List
mod site	chr20:49228864-49228865:+		[6]
Sequence	ACAGCTGGCCCAGTTCTGCAACATCACCACCTGCCTGGCTG
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000371764.8; ENST00000618172.4; ENST00000622530.4; ENST00000493252.2; ENST00000484427.5
External Link	RMBase: m6A_site_535591
mod ID: M6ASITE053437		Click to Show/Hide the Full List
mod site	chr20:49230246-49230247:+		[6]
Sequence	AGCTCTTCGGGCAGCGCCTGACATCCTCATCGCCACCCCAG
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000622530.4; ENST00000484427.5; ENST00000493252.2; ENST00000371764.8; ENST00000618172.4
External Link	RMBase: m6A_site_535592
mod ID: M6ASITE053438		Click to Show/Hide the Full List
mod site	chr20:49230288-49230289:+		[6]
Sequence	CCGGCTCATCGATCACCTCCACAACTGCCCTTCCTTCCACC
Motif Score	2.053113095
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000484427.5; ENST00000622530.4; ENST00000493252.2; ENST00000371764.8; ENST00000618172.4
External Link	RMBase: m6A_site_535593
mod ID: M6ASITE053439		Click to Show/Hide the Full List
mod site	chr20:49230345-49230346:+		[7]
Sequence	GCTCATCCTGGACGAGGCTGACAGGTGCTCCTCACAGCCTG
Motif Score	2.859755952
Cell/Tissue List	HEK293
Seq Type List	m6A-REF-seq
Transcript ID List	ENST00000484427.5; ENST00000493252.2; ENST00000371764.8; ENST00000618172.4; ENST00000622530.4
External Link	RMBase: m6A_site_535594
mod ID: M6ASITE053440		Click to Show/Hide the Full List
mod site	chr20:49233372-49233373:+		[5]
Sequence	TGTGTTCCCACCACCGCCAGACCATGCTCTTCTCGGCCACC
Motif Score	2.876744048
Cell/Tissue List	HeLa; MM6
Seq Type List	m6A-seq
Transcript ID List	ENST00000493252.2; ENST00000371764.8; ENST00000618172.4; ENST00000484427.5; ENST00000622530.4
External Link	RMBase: m6A_site_535595
mod ID: M6ASITE053441		Click to Show/Hide the Full List
mod site	chr20:49233619-49233620:+		[5]
Sequence	TCCTGTCCGGATATTTGTGAACAGCAACACAGATGTGGCTC
Motif Score	2.951386905
Cell/Tissue List	HeLa; MM6
Seq Type List	m6A-seq
Transcript ID List	ENST00000493252.2; ENST00000618172.4; ENST00000622530.4; ENST00000484427.5; ENST00000371764.8
External Link	RMBase: m6A_site_535596
mod ID: M6ASITE053442		Click to Show/Hide the Full List
mod site	chr20:49233688-49233689:+		[5]
Sequence	CCGGCCTAATCGTGAAGGAGACCGGGAAGCCATCGTGGCAG
Motif Score	2.876744048
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000622530.4; ENST00000618172.4; ENST00000371764.8; ENST00000484427.5
External Link	RMBase: m6A_site_535597
mod ID: M6ASITE053443		Click to Show/Hide the Full List
mod site	chr20:49234981-49234982:+		[5]
Sequence	ATGTGATGCTGTTCACGCAAACCAAGAAGCAGGCCCACCGC
Motif Score	2.185083333
Cell/Tissue List	HeLa; HepG2; MM6
Seq Type List	m6A-seq
Transcript ID List	ENST00000622530.4; ENST00000618172.4; ENST00000471144.1; ENST00000484427.5; ENST00000371764.8
External Link	RMBase: m6A_site_535598
mod ID: M6ASITE053444		Click to Show/Hide the Full List
mod site	chr20:49235006-49235007:+		[6]
Sequence	GAAGCAGGCCCACCGCATGCACATCCTCCTGGGGCTCATGG
Motif Score	2.830589286
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000618172.4; ENST00000484427.5; ENST00000371764.8; ENST00000622530.4; ENST00000471144.1
External Link	RMBase: m6A_site_535599
mod ID: M6ASITE053446		Click to Show/Hide the Full List
mod site	chr20:49235106-49235107:+		[5]
Sequence	CGGTAACATTTGGGGTGGGGACTGAGGCTCCCACCATCCTT
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; peripheral-blood
Seq Type List	m6A-seq
Transcript ID List	ENST00000484427.5; ENST00000622530.4; ENST00000618172.4; ENST00000371764.8; ENST00000471144.1
External Link	RMBase: m6A_site_535600
mod ID: M6ASITE053447		Click to Show/Hide the Full List
mod site	chr20:49235158-49235159:+		[5]
Sequence	AGGATAGAAGGAAGAAGAGGACCCTGAGCATTCTATTAGAA
Motif Score	3.622404762
Cell/Tissue List	HeLa
Seq Type List	m6A-seq
Transcript ID List	ENST00000622530.4; ENST00000371764.8; ENST00000471144.1; ENST00000484427.5; ENST00000618172.4
External Link	RMBase: m6A_site_535601
mod ID: M6ASITE053448		Click to Show/Hide the Full List
mod site	chr20:49236364-49236365:+		[5]
Sequence	ACAATGCCTAATACCATCAAACATTATGTCCACCGGGTGGG
Motif Score	2.20572619
Cell/Tissue List	HeLa; CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000618172.4; ENST00000471144.1; ENST00000371764.8; ENST00000622530.4; ENST00000484427.5
External Link	RMBase: m6A_site_535602
mod ID: M6ASITE053449		Click to Show/Hide the Full List
mod site	chr20:49236389-49236390:+		[5]
Sequence	ATGTCCACCGGGTGGGGCGAACAGCACGTGCTGGCAGGGCT
Motif Score	2.951386905
Cell/Tissue List	HeLa; CD34
Seq Type List	m6A-seq
Transcript ID List	ENST00000484427.5; ENST00000471144.1; ENST00000622530.4; ENST00000618172.4; ENST00000371764.8
External Link	RMBase: m6A_site_535603
mod ID: M6ASITE053450		Click to Show/Hide the Full List
mod site	chr20:49238969-49238970:+		[5]
Sequence	TGTCATCCTCAAATTCCGGGACAAGATTGAGAAAATGGAGA
Motif Score	3.643047619
Cell/Tissue List	HeLa; CD34; hESC-HEK293T; U2OS; MM6; Huh7
Seq Type List	m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List	ENST00000471144.1; ENST00000484427.5; ENST00000618172.4; ENST00000371764.8; ENST00000622530.4
External Link	RMBase: m6A_site_535608
mod ID: M6ASITE053451		Click to Show/Hide the Full List
mod site	chr20:49239310-49239311:+		[5]
Sequence	CCGAGAGGAGCTGGTTCCAGACCAAAGAAGAGAGGAAGAAG
Motif Score	2.876744048
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; U2OS; hNPCs; fibroblasts; A549; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000371764.8; ENST00000622530.4; ENST00000618172.4; ENST00000471144.1; ENST00000484427.5
External Link	RMBase: m6A_site_535614
mod ID: M6ASITE053452		Click to Show/Hide the Full List
mod site	chr20:49242636-49242637:+		[5]
Sequence	AAATCTGTATTTGATGAAGAACTCACCAACACAAGCAAGAA
Motif Score	3.373380952
Cell/Tissue List	HeLa; CD34; HepG2; A549; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000618172.4; ENST00000371764.8; ENST00000471144.1; ENST00000622530.4
External Link	RMBase: m6A_site_535615
mod ID: M6ASITE053453		Click to Show/Hide the Full List
mod site	chr20:49242644-49242645:+		[6]
Sequence	ATTTGATGAAGAACTCACCAACACAAGCAAGAAGGCCCTGA
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000618172.4; ENST00000371764.8; ENST00000471144.1; ENST00000484427.5; ENST00000622530.4
External Link	RMBase: m6A_site_535616
mod ID: M6ASITE053454		Click to Show/Hide the Full List
mod site	chr20:49242666-49242667:+		[5]
Sequence	ACAAGCAAGAAGGCCCTGAAACAGTATCGAGCTGGGTAGGA
Motif Score	2.20572619
Cell/Tissue List	HeLa; CD34; A549; H1299; MM6; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000618172.4; ENST00000471144.1; ENST00000622530.4; ENST00000484427.5; ENST00000371764.8
External Link	RMBase: m6A_site_535617
mod ID: M6ASITE053455		Click to Show/Hide the Full List
mod site	chr20:49243649-49243650:+		[5]
Sequence	CCTTCCTTTGAAGAAAGGAAACAGTTGGGCTTGCCCCACCA
Motif Score	2.20572619
Cell/Tissue List	HeLa; CD34; A549; MM6; Huh7; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000484427.5; ENST00000371764.8; ENST00000622530.4; ENST00000471144.1; ENST00000618172.4
External Link	RMBase: m6A_site_535618
mod ID: M6ASITE053456		Click to Show/Hide the Full List
mod site	chr20:49243684-49243685:+		[5]
Sequence	CCACCAGAGACGAGGAGGAAACTTTAAATCTAAATCCAGGT
Motif Score	2.627720238
Cell/Tissue List	HeLa; Huh7; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000471144.1; ENST00000618172.4; ENST00000484427.5; ENST00000622530.4; ENST00000371764.8
External Link	RMBase: m6A_site_535619
mod ID: M6ASITE053457		Click to Show/Hide the Full List
mod site	chr20:49243817-49243818:+		[6]
Sequence	ACTCTGATTTTCTTACAGATACAAGAGGAGGAAGTAGCTGT
Motif Score	2.110482143
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000371764.8; ENST00000471144.1; ENST00000622530.4; ENST00000484427.5; ENST00000618172.4
External Link	RMBase: m6A_site_535620
mod ID: M6ASITE053458		Click to Show/Hide the Full List
mod site	chr20:49243936-49243937:+		[6]
Sequence	TCCATTTGTTTAAAAAAAAAACAAAAACAAAAAACAACACT
Motif Score	2.20572619
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000371764.8; ENST00000618172.4; ENST00000484427.5; ENST00000471144.1; ENST00000622530.4; rmsk_5141845
External Link	RMBase: m6A_site_535621

N7-methylguanosine (m7G)

In total 1 m6A sequence/site(s) in this target gene
mod ID: m7GSITE000083		Click to Show/Hide the Full List
mod site	chr20:49224969-49224970:+		[8]
Sequence	CTCAAAGTAAAGGATCGGAAGAAGAAGAAGAAGAAAGGACA
Cell/Tissue List	A549; HeLa; HepG2
Seq Type List	BoRed-seq&m7G-RIP-seq; m7G-seq
Transcript ID List	ENST00000462328.2; ENST00000484427.5; ENST00000493252.2; ENST00000618172.4; rmsk_5141790; ENST00000622530.4; ENST00000371764.8
External Link	RMBase: m7G_site_573

Ref 1	Trichomonas vaginalis thymidine kinase: purification, characterization and search for inhibitors. Biochem J. 1998 Aug 15;334 ( Pt 1)(Pt 1):15-22. doi: 10.1042/bj3340015.
Ref 2	RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Res. 2014 Jan;42(Database issue):D109-13. doi: 10.1093/nar/gkt996. Epub 2013 Oct 25.
Ref 3	The m1A landscape on cytosolic and mitochondrial mRNA at single-base resolution. Nature. 2017 Nov 9;551(7679):251-255. doi: 10.1038/nature24456. Epub 2017 Oct 25.
Ref 4	5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res. 2017 May;27(5):606-625. doi: 10.1038/cr.2017.55. Epub 2017 Apr 18.
Ref 5	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 6	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 7	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 8	METTL1 Promotes let-7 MicroRNA Processing via m7G Methylation. Mol Cell. 2019 Jun 20;74(6):1278-1290.e9. doi: 10.1016/j.molcel.2019.03.040. Epub 2019 Apr 25.

m6A Target Gene Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

Visitor Map