General Information of the m6A Target Gene (ID: M6ATAR01400)
Target Name Ephrin type-A receptor 3 (EPHA3)
Synonyms
EC 2.7.10.1; EPH-like kinase 4; EK4; hEK4; HEK; Human embryo kinase; Tyrosine-protein kinase TYRO4; Tyrosine-protein kinase receptor ETK1; Eph-like tyrosine kinase 1
    Click to Show/Hide
Gene Name EPHA3
Chromosomal Location 3p11.1
Family Protein kinase superfamily, Tyr protein kinase family, Ephrin receptor subfamily
Function
Receptor tyrosine kinase which binds promiscuously membrane-bound ephrin family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Highly promiscuous for ephrin-A ligands it binds preferentially EFNA5. Upon activation by EFNA5 regulates cell-cell adhesion, cytoskeletal organization and cell migration. Plays a role in cardiac cells migration and differentiation and regulates the formation of the atrioventricular canal and septum during development probably through activation by EFNA1. Involved in the retinotectal mapping of neurons. May also control the segregation but not the guidance of motor and sensory axons during neuromuscular circuit development.
    Click to Show/Hide
Gene ID 2042
Uniprot ID
EPHA3_HUMAN
HGNC ID
HGNC:3387
KEGG ID
hsa:2042
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
DNA modification
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT02202
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Protein tyrosine phosphatase non-receptor type 13 (PTPN13)
Crosstalk relationship DNA modification → m6A
Disease Liver cancer
Non-coding RNA
m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)
In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT05361
Epigenetic Regulator VIM antisense RNA 1 (VIM-AS1)
Regulated Target Insulin like growth factor 2 mRNA binding protein 1 (IGF2BP1)
Crosstalk relationship ncRNA → m6A
Disease Liver cancer
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01400)
Ephrin type-A receptor 3 (EPHA3)
Adenosine-to-Inosine editing (A-to-I)
In total 1 m6A sequence/site(s) in this target gene
mod ID: A2ISITE011985 Click to Show/Hide the Full List
mod site chr3:89459047-89459048:+ [2]
Sequence GAGGGTGAAGGGAAAGGGAAAGGATAGCATTCTGACAAATA
Transcript ID List ENST00000336596.7; rmsk_1030626; ENST00000494014.1
External Link RMBase: RNA-editing_site_98243
N6-methyladenosine (m6A)
In total 45 m6A sequence/site(s) in this target gene
mod ID: M6ASITE061724 Click to Show/Hide the Full List
mod site chr3:89107628-89107629:+ [3]
Sequence CTCCTTATCTCCAGTGTCAAACTTGACATCAGCCTGCGAGC
Motif Score 2.627720238
Cell/Tissue List Jurkat; TREX
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599526
mod ID: M6ASITE061725 Click to Show/Hide the Full List
mod site chr3:89107810-89107811:+ [4]
Sequence GTTCTCGACAGCTTCGGGGAACTGATTCCGCAGCCTTCCAA
Motif Score 3.373380952
Cell/Tissue List HEK293T; Jurkat; GSC-11
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000452448.6; ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599527
mod ID: M6ASITE061726 Click to Show/Hide the Full List
mod site chr3:89127228-89127229:+ [4]
Sequence TCAATCTACTGGATTCAAAAACAATTCAAGGGGAGCTGGGC
Motif Score 2.20572619
Cell/Tissue List HEK293T; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000452448.6; ENST00000336596.7; ENST00000494014.1
External Link RMBase: m6A_site_599528
mod ID: M6ASITE061727 Click to Show/Hide the Full List
mod site chr3:89209885-89209886:+ [4]
Sequence GAGATCAGTGGTGTGGATGAACATTACACACCCATCAGGAC
Motif Score 2.951386905
Cell/Tissue List HEK293T; Jurkat; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7; ENST00000452448.6
External Link RMBase: m6A_site_599529
mod ID: M6ASITE061728 Click to Show/Hide the Full List
mod site chr3:89209904-89209905:+ [4]
Sequence AACATTACACACCCATCAGGACTTACCAGGTGTGCAATGTC
Motif Score 4.065041667
Cell/Tissue List HEK293T; Jurkat; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1; ENST00000452448.6
External Link RMBase: m6A_site_599530
mod ID: M6ASITE061729 Click to Show/Hide the Full List
mod site chr3:89209929-89209930:+ [4]
Sequence CCAGGTGTGCAATGTCATGGACCACAGTCAAAACAATTGGC
Motif Score 3.622404762
Cell/Tissue List HEK293T; Jurkat; HEK293A-TOA; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000452448.6; ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599531
mod ID: M6ASITE061730 Click to Show/Hide the Full List
mod site chr3:89209941-89209942:+ [4]
Sequence TGTCATGGACCACAGTCAAAACAATTGGCTGAGAACAAACT
Motif Score 2.20572619
Cell/Tissue List HEK293T; Jurkat; HEK293A-TOA; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494014.1; ENST00000452448.6; ENST00000336596.7
External Link RMBase: m6A_site_599532
mod ID: M6ASITE061731 Click to Show/Hide the Full List
mod site chr3:89209955-89209956:+ [4]
Sequence GTCAAAACAATTGGCTGAGAACAAACTGGGTCCCCAGGAAC
Motif Score 2.951386905
Cell/Tissue List HEK293T; Jurkat; HEK293A-TOA; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000336596.7; ENST00000452448.6; ENST00000494014.1
External Link RMBase: m6A_site_599533
mod ID: M6ASITE061732 Click to Show/Hide the Full List
mod site chr3:89209974-89209975:+ [4]
Sequence AACAAACTGGGTCCCCAGGAACTCAGCTCAGAAGATTTATG
Motif Score 3.373380952
Cell/Tissue List HEK293T; Jurkat; HEK293A-TOA; iSLK; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000452448.6; ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599534
mod ID: M6ASITE061733 Click to Show/Hide the Full List
mod site chr3:89210019-89210020:+ [4]
Sequence GCTCAAGTTCACTCTACGAGACTGCAATAGCATTCCATTGG
Motif Score 3.319380952
Cell/Tissue List HEK293T; Jurkat; HEK293A-TOA; iSLK; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1; ENST00000452448.6
External Link RMBase: m6A_site_599535
mod ID: M6ASITE061734 Click to Show/Hide the Full List
mod site chr3:89210048-89210049:+ [4]
Sequence GCATTCCATTGGTTTTAGGAACTTGCAAGGAGACATTCAAC
Motif Score 3.373380952
Cell/Tissue List HEK293T; Jurkat; GSC-11; HEK293A-TOA; iSLK; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7; ENST00000452448.6
External Link RMBase: m6A_site_599536
mod ID: M6ASITE061735 Click to Show/Hide the Full List
mod site chr3:89210060-89210061:+ [4]
Sequence TTTTAGGAACTTGCAAGGAGACATTCAACCTGTACTACATG
Motif Score 2.897386905
Cell/Tissue List HEK293T; Jurkat; GSC-11; HEK293A-TOA; iSLK; TREX; endometrial
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494014.1; ENST00000452448.6; ENST00000336596.7
External Link RMBase: m6A_site_599537
mod ID: M6ASITE061736 Click to Show/Hide the Full List
mod site chr3:89210181-89210182:+ [4]
Sequence CACTCAAATGGATCTTGGGGACCGTATTCTGAAGCTCAACA
Motif Score 3.622404762
Cell/Tissue List HEK293T; Jurkat; TREX
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1; ENST00000452448.6
External Link RMBase: m6A_site_599538
mod ID: M6ASITE061737 Click to Show/Hide the Full List
mod site chr3:89210346-89210347:+ [4]
Sequence GAATCTGGCTATGTTTCCAGACACGGTACCCATGGACTCCC
Motif Score 2.897386905
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1; ENST00000452448.6
External Link RMBase: m6A_site_599539
mod ID: M6ASITE061738 Click to Show/Hide the Full List
mod site chr3:89210361-89210362:+ [4]
Sequence TCCAGACACGGTACCCATGGACTCCCAGTCCCTGGTGGAGG
Motif Score 4.065041667
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000494014.1; ENST00000452448.6; ENST00000336596.7
External Link RMBase: m6A_site_599540
mod ID: M6ASITE061739 Click to Show/Hide the Full List
mod site chr3:89341798-89341799:+ [4]
Sequence TTATCTCTAATATAAACGAGACCTCAGTTATCCTGGACTGG
Motif Score 2.876744048
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000452448.6; ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599541
mod ID: M6ASITE061740 Click to Show/Hide the Full List
mod site chr3:89341814-89341815:+ [4]
Sequence CGAGACCTCAGTTATCCTGGACTGGAGTTGGCCCCTGGACA
Motif Score 4.065041667
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7; ENST00000452448.6
External Link RMBase: m6A_site_599542
mod ID: M6ASITE061741 Click to Show/Hide the Full List
mod site chr3:89341832-89341833:+ [4]
Sequence GGACTGGAGTTGGCCCCTGGACACAGGAGGCCGGAAAGATG
Motif Score 3.643047619
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000452448.6; ENST00000336596.7; ENST00000494014.1
External Link RMBase: m6A_site_599543
mod ID: M6ASITE061742 Click to Show/Hide the Full List
mod site chr3:89341896-89341897:+ [4]
Sequence AAATGTGGGTGGAATATAAAACAGTGTGAGCCATGCAGCCC
Motif Score 2.20572619
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000452448.6; ENST00000336596.7; ENST00000494014.1
External Link RMBase: m6A_site_599544
mod ID: M6ASITE061743 Click to Show/Hide the Full List
mod site chr3:89450276-89450277:+ [3]
Sequence CTGCTGGCAGAAAGACAGGAACAACAGACCCAAGTTTGAGC
Motif Score 2.951386905
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1
External Link RMBase: m6A_site_599545
mod ID: M6ASITE061744 Click to Show/Hide the Full List
mod site chr3:89450283-89450284:+ [3]
Sequence CAGAAAGACAGGAACAACAGACCCAAGTTTGAGCAGATTGT
Motif Score 2.876744048
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1
External Link RMBase: m6A_site_599546
mod ID: M6ASITE061745 Click to Show/Hide the Full List
mod site chr3:89450315-89450316:+ [3]
Sequence GCAGATTGTTAGTATTCTGGACAAGCTTATCCGGAATCCCG
Motif Score 3.643047619
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599547
mod ID: M6ASITE061746 Click to Show/Hide the Full List
mod site chr3:89472471-89472472:+ [3]
Sequence TTTTTCTTGCAGGCCATCAAACCTTCTTCTGGACCAAAGCA
Motif Score 2.185083333
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599548
mod ID: M6ASITE061747 Click to Show/Hide the Full List
mod site chr3:89472483-89472484:+ [3]
Sequence GCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCA
Motif Score 3.622404762
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599549
mod ID: M6ASITE061748 Click to Show/Hide the Full List
mod site chr3:89472545-89472546:+ [3]
Sequence ACTGGCTTAATGGTGTCTGGACAGCACACTGCAAGGAAATC
Motif Score 3.643047619
Cell/Tissue List Jurkat
Seq Type List m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599550
mod ID: M6ASITE061749 Click to Show/Hide the Full List
mod site chr3:89479567-89479568:+ [4]
Sequence GGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
Motif Score 2.897386905
Cell/Tissue List HEK293T; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000336596.7; ENST00000494014.1
External Link RMBase: m6A_site_599551
mod ID: M6ASITE061750 Click to Show/Hide the Full List
mod site chr3:89479615-89479616:+ [4]
Sequence GAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTACAAA
Motif Score 2.897386905
Cell/Tissue List HEK293T; Jurkat
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599552
mod ID: M6ASITE061751 Click to Show/Hide the Full List
mod site chr3:89479658-89479659:+ [4]
Sequence CCTTAAAATGGAATTGAAAAACTCTTTATTTTCCCCTATCA
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000494014.1; ENST00000336596.7
External Link RMBase: m6A_site_599553
mod ID: M6ASITE061752 Click to Show/Hide the Full List
mod site chr3:89479775-89479776:+ [4]
Sequence TCAGCGTAAAATGGTGAAGAACTAGCATATAGCCATTGATC
Motif Score 3.373380952
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599554
mod ID: M6ASITE061753 Click to Show/Hide the Full List
mod site chr3:89479800-89479801:+ [4]
Sequence CATATAGCCATTGATCATAAACTGACTATCATAAAATCAAA
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599555
mod ID: M6ASITE061754 Click to Show/Hide the Full List
mod site chr3:89479821-89479822:+ [4]
Sequence CTGACTATCATAAAATCAAAACAAGTGAAATAACAAAATGG
Motif Score 2.20572619
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599556
mod ID: M6ASITE061755 Click to Show/Hide the Full List
mod site chr3:89479842-89479843:+ [4]
Sequence CAAGTGAAATAACAAAATGGACATGGTGGCTTTGTTTAGGT
Motif Score 3.643047619
Cell/Tissue List HEK293T; TREX
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599557
mod ID: M6ASITE061756 Click to Show/Hide the Full List
mod site chr3:89479881-89479882:+ [4]
Sequence GTAGAGCCACAAAAGAAAAGACTTGTAATATTTTTATATAC
Motif Score 3.319380952
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599558
mod ID: M6ASITE061757 Click to Show/Hide the Full List
mod site chr3:89479969-89479970:+ [4]
Sequence CAGAGGAATTTATACCTCAAACTATCTGGCCATATTTACTA
Motif Score 2.627720238
Cell/Tissue List HEK293T
Seq Type List MeRIP-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599559
mod ID: M6ASITE061758 Click to Show/Hide the Full List
mod site chr3:89480757-89480758:+ [5]
Sequence TGTTTAGGTGAATTAATTAAACATTGTGATCATTAGTACCA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7; rmsk_1030645
External Link RMBase: m6A_site_599560
mod ID: M6ASITE061759 Click to Show/Hide the Full List
mod site chr3:89480814-89480815:+ [5]
Sequence AGAGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTG
Motif Score 2.830589286
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599561
mod ID: M6ASITE061760 Click to Show/Hide the Full List
mod site chr3:89480871-89480872:+ [5]
Sequence AACTTCTTTGAATTTACTGGACATAACATTTTCAGAATAGT
Motif Score 3.643047619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599562
mod ID: M6ASITE061761 Click to Show/Hide the Full List
mod site chr3:89481051-89481052:+ [5]
Sequence TAGTAATATATTCTGAAGCAACATTTTAGCTCTATTGATAC
Motif Score 2.173910714
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599563
mod ID: M6ASITE061762 Click to Show/Hide the Full List
mod site chr3:89481210-89481211:+ [5]
Sequence ACAATCGCAAATCAAAACTCACAAGTGCTCATCTGTTGTAG
Motif Score 2.047297619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599564
mod ID: M6ASITE061763 Click to Show/Hide the Full List
mod site chr3:89481246-89481247:+ [6]
Sequence TGTAGATTTAGTGTAATAAGACTTAGATTGTGCTCCTTCGG
Motif Score 3.319380952
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599565
mod ID: M6ASITE061764 Click to Show/Hide the Full List
mod site chr3:89481363-89481364:+ [5]
Sequence AGCATGAAATTTTTAAAAATACACTTGTGATTATAAAATTA
Motif Score 2.110482143
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599566
mod ID: M6ASITE061765 Click to Show/Hide the Full List
mod site chr3:89481738-89481739:+ [5]
Sequence CTTACCCTGTACATATGTAAACATAAGTGTACGATTCTTAA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599567
mod ID: M6ASITE061766 Click to Show/Hide the Full List
mod site chr3:89481817-89481818:+ [6]
Sequence TTTGTACAGGAACTGCATTGACTTTCAGTAAACATAAAGCC
Motif Score 3.28175
Cell/Tissue List HEK293T
Seq Type List DART-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599568
mod ID: M6ASITE061767 Click to Show/Hide the Full List
mod site chr3:89482036-89482037:+ [5]
Sequence TATTACTCAGTTTATGTTGTACAATGTAGATGGCCTCTTAC
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599569
mod ID: M6ASITE061768 Click to Show/Hide the Full List
mod site chr3:89482082-89482083:+ [5]
Sequence TAAAATGATTTGTAGTGGAAACATTTATATTTTTATAATAA
Motif Score 2.20572619
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000336596.7
External Link RMBase: m6A_site_599570