m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR01330)
Target Name Calcium-binding and coiled-coil domain-containing protein 1 (CALCOCO1)
Synonyms
Calphoglin; Coiled-coil coactivator protein; Sarcoma antigen NY-SAR-3
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Gene Name CALCOCO1
Chromosomal Location 12q13.13
Family CALCOCO family
Function
Functions as a coactivator for aryl hydrocarbon and nuclear receptors (NR). Recruited to promoters through its contact with the N-terminal basic helix-loop-helix-Per-Arnt-Sim (PAS) domain of transcription factors or coactivators, such as NCOA2. During ER-activation acts synergistically in combination with other NCOA2-binding proteins, such as EP300, CREBBP and CARM1. Involved in the transcriptional activation of target genes in the Wnt/CTNNB1 pathway. Functions as a secondary coactivator in LEF1-mediated transcriptional activation via its interaction with CTNNB1. Coactivator function for nuclear receptors and LEF1/CTNNB1 involves differential utilization of two different activation regions (By similarity). In association with CCAR1 enhances GATA1- and MED1-mediated transcriptional activation from the gamma-globin promoter during erythroid differentiation of K562 erythroleukemia cells (PubMed:24245781).
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Gene ID 57658
Uniprot ID
CACO1_HUMAN
HGNC ID
HGNC:29306
KEGG ID
hsa:57658
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
DNA modification
m6A Regulator: Methyltransferase-like 14 (METTL14)
 Regulator Info 
In total 6 item(s) under this m6A regulator
Crosstalk ID: M6ACROT02225
 Crosstalk Info 
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 3B (DNMT3B)
Regulated Target Methyltransferase-like protein 14 (METTL14)
Crosstalk relationship DNA modification → m6A
Disease Breast cancer
 Disease Info 
Drug Paclitaxel
 Drug Info 
Crosstalk ID: M6ACROT02249
 Crosstalk Info 
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Methyltransferase-like protein 14 (METTL14)
Crosstalk relationship DNA modification → m6A
Disease Breast cancer
 Disease Info 
Drug Paclitaxel
 Drug Info 
Crosstalk ID: M6ACROT02273
 Crosstalk Info 
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 1 (DNMT1)
Regulated Target Methyltransferase-like protein 14 (METTL14)
Crosstalk relationship DNA modification → m6A
Disease Breast cancer
 Disease Info 
Drug Paclitaxel
 Drug Info 
Crosstalk ID: M6ACROT05976
 Crosstalk Info 
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 3B (DNMT3B)
Regulated Target Methyltransferase-like protein 14 (METTL14)
Crosstalk relationship DNA modification → m6A
Disease Breast cancer
 Disease Info 
Drug STM2457
 Drug Info 
Crosstalk ID: M6ACROT05978
 Crosstalk Info 
Epigenetic Regulator Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target Methyltransferase-like protein 14 (METTL14)
Crosstalk relationship DNA modification → m6A
Disease Breast cancer
 Disease Info 
Drug STM2457
 Drug Info 
Crosstalk ID: M6ACROT05980
 Crosstalk Info 
Epigenetic Regulator DNA (cytosine-5)-methyltransferase 1 (DNMT1)
Regulated Target Methyltransferase-like protein 14 (METTL14)
Crosstalk relationship DNA modification → m6A
Disease Breast cancer
 Disease Info 
Drug STM2457
 Drug Info 
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR01330)
Calcium-binding and coiled-coil domain-containing protein 1 (CALCOCO1)
N6-methyladenosine (m6A)
In total 66 m6A sequence/site(s) in this target gene
mod ID: M6ASITE012885 Click to Show/Hide the Full List
mod site chr12:53710375-53710376:- [2]
Sequence CCTTCAGGGCCCCTGTGTGGACCACCCCCACCATTCCCTTT
Motif Score 3.622404762
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000550804.6; ENST00000262059.8
External Link RMBase: m6A_site_190566
mod ID: M6ASITE012886 Click to Show/Hide the Full List
mod site chr12:53711071-53711072:- [2]
Sequence TATCATGAGGTGTGACTGGAACACAGGGCCCAGACCTCCAG
Motif Score 2.951386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000550804.6
External Link RMBase: m6A_site_190567
mod ID: M6ASITE012887 Click to Show/Hide the Full List
mod site chr12:53711140-53711141:- [2]
Sequence TCCATCCCTTTGTAGTTTGAACAAATATATTTATATGATAT
Motif Score 2.951386905
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000430117.6; ENST00000550804.6; ENST00000546443.5
External Link RMBase: m6A_site_190568
mod ID: M6ASITE012888 Click to Show/Hide the Full List
mod site chr12:53711243-53711244:- [3]
Sequence TTCTGTGAGGAATGGGGGGAACAAGTGGTCCCAGGTATCCC
Motif Score 2.951386905
Cell/Tissue List MT4; Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000548263.5; ENST00000430117.6; ENST00000262059.8; ENST00000550804.6; ENST00000546443.5
External Link RMBase: m6A_site_190569
mod ID: M6ASITE012889 Click to Show/Hide the Full List
mod site chr12:53711468-53711469:- [4]
Sequence GCACAGAGGCAGCAGCATGGACATCATGGCCTCTCAGGTCC
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; hESC-HEK293T; HepG2; U2OS; fibroblasts; A549; GM12878; LCLs; Huh7; iSLK; MSC; TIME; TREX
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000262059.8; ENST00000550804.6; ENST00000546443.5; ENST00000548263.5; ENST00000430117.6
External Link RMBase: m6A_site_190570
mod ID: M6ASITE012890 Click to Show/Hide the Full List
mod site chr12:53711486-53711487:- [5]
Sequence GAGTTTTCTCTGGGGTCTGCACAGAGGCAGCAGCATGGACA
Motif Score 2.830589286
Cell/Tissue List kidney; HEK293T
Seq Type List m6A-REF-seq; DART-seq
Transcript ID List ENST00000548263.5; ENST00000546443.5; ENST00000262059.8; ENST00000550804.6; ENST00000430117.6
External Link RMBase: m6A_site_190571
mod ID: M6ASITE012891 Click to Show/Hide the Full List
mod site chr12:53711685-53711686:- [2]
Sequence CTGAAAGTGGTTTTGGAGGAACCGGGATGGAGGAGGCCTTC
Motif Score 2.930744048
Cell/Tissue List Huh7
Seq Type List MeRIP-seq
Transcript ID List ENST00000550804.6; ENST00000262059.8; ENST00000430117.6; ENST00000546443.5; ENST00000548263.5
External Link RMBase: m6A_site_190572
mod ID: M6ASITE012892 Click to Show/Hide the Full List
mod site chr12:53711818-53711819:- [4]
Sequence TGATATTCTGTTCCCTAAGAACTGCTTCTGTGTGCCCTGTT
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; Huh7
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000430117.6; ENST00000262059.8; ENST00000546443.5; ENST00000548263.5; ENST00000550804.6
External Link RMBase: m6A_site_190573
mod ID: M6ASITE012893 Click to Show/Hide the Full List
mod site chr12:53711962-53711963:- [4]
Sequence CTTCTTTTTCAGCACCCAGGACCCCTTCACCTTTGAGTGAT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; A549; U2OS; fibroblasts; LCLs; MT4; MM6; Huh7; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000430117.6; ENST00000548263.5; ENST00000546443.5; ENST00000262059.8; ENST00000550804.6
External Link RMBase: m6A_site_190574
mod ID: M6ASITE012894 Click to Show/Hide the Full List
mod site chr12:53711985-53711986:- [4]
Sequence CTGGAGGACCACATGGATGGACACTTCTTTTTCAGCACCCA
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; brain; A549; U2OS; fibroblasts; LCLs; MT4; MM6; Huh7; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-REF-seq
Transcript ID List ENST00000546443.5; ENST00000430117.6; ENST00000262059.8; ENST00000548263.5; ENST00000550804.6
External Link RMBase: m6A_site_190575
mod ID: M6ASITE012895 Click to Show/Hide the Full List
mod site chr12:53711998-53711999:- [4]
Sequence TGACAAGGATGCCCTGGAGGACCACATGGATGGACACTTCT
Motif Score 3.622404762
Cell/Tissue List HeLa; CD34; HepG2; HEK293T; A549; fibroblasts; LCLs; MT4; MM6; Huh7; CD4T; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000262059.8; ENST00000546443.5; ENST00000548263.5; ENST00000430117.6; ENST00000550804.6
External Link RMBase: m6A_site_190576
mod ID: M6ASITE012896 Click to Show/Hide the Full List
mod site chr12:53712016-53712017:- [6]
Sequence GCGCTTTCCTGCTGAGAGTGACAAGGATGCCCTGGAGGACC
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T; A549
Seq Type List MAZTER-seq; m6A-CLIP/IP
Transcript ID List ENST00000430117.6; ENST00000550804.6; ENST00000546443.5; ENST00000262059.8; ENST00000548263.5
External Link RMBase: m6A_site_190577
mod ID: M6ASITE012897 Click to Show/Hide the Full List
mod site chr12:53712065-53712066:- [6]
Sequence CTGGGGGCCCTGCCACCCCCACATGGAAGGAGTGTCCTATC
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000430117.6; ENST00000550804.6; ENST00000548263.5; ENST00000262059.8; ENST00000546443.5
External Link RMBase: m6A_site_190578
mod ID: M6ASITE012898 Click to Show/Hide the Full List
mod site chr12:53712092-53712093:- [7]
Sequence CAGTGGGTACCCTGTCAGAAACCAGCACTGGGGGCCCTGCC
Motif Score 2.185083333
Cell/Tissue List HEK293T; HeLa; A549; Huh7; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; MSC; TREX; endometrial; NB4
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000430117.6; ENST00000550804.6; ENST00000546443.5; ENST00000548263.5; ENST00000262059.8
External Link RMBase: m6A_site_190579
mod ID: M6ASITE012899 Click to Show/Hide the Full List
mod site chr12:53712164-53712165:- [7]
Sequence GTCTGCAAGTCAAGAAGGGAACAGAGCACGCCGACCCTCTC
Motif Score 2.951386905
Cell/Tissue List HeLa; peripheral-blood; GSC-11; HEK293A-TOA; TREX; endometrial; NB4
Seq Type List MeRIP-seq; m6A-seq
Transcript ID List ENST00000430117.6; ENST00000262059.8; ENST00000550804.6; ENST00000548263.5; ENST00000546443.5
External Link RMBase: m6A_site_190580
mod ID: M6ASITE012900 Click to Show/Hide the Full List
mod site chr12:53712213-53712214:- [4]
Sequence AGGCACAGGATAACCTGGGAACCCAGGCACATGGGTCCTGC
Motif Score 2.930744048
Cell/Tissue List HeLa; H1B; H1A; hNPCs; LCLs; Huh7; Jurkat; CD4T; GSC-11; HEK293A-TOA; iSLK; MSC; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000548263.5; ENST00000262059.8; ENST00000430117.6; ENST00000550804.6; ENST00000546443.5
External Link RMBase: m6A_site_190581
mod ID: M6ASITE012901 Click to Show/Hide the Full List
mod site chr12:53712301-53712302:- [4]
Sequence AAGAAGAGAGGACATGGGGAACTGGAAAAATAAGCCTTCCA
Motif Score 3.373380952
Cell/Tissue List HeLa; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; MT4; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000546443.5; ENST00000550804.6; ENST00000548263.5; ENST00000262059.8; ENST00000430117.6
External Link RMBase: m6A_site_190582
mod ID: M6ASITE012902 Click to Show/Hide the Full List
mod site chr12:53712310-53712311:- [4]
Sequence CAGGGACTAAAGAAGAGAGGACATGGGGAACTGGAAAAATA
Motif Score 3.643047619
Cell/Tissue List HeLa; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; CD8T; MT4; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000546443.5; ENST00000262059.8; ENST00000548263.5; ENST00000430117.6; ENST00000550804.6
External Link RMBase: m6A_site_190583
mod ID: M6ASITE012903 Click to Show/Hide the Full List
mod site chr12:53712325-53712326:- [4]
Sequence CACTGCAGAGACCAGCAGGGACTAAAGAAGAGAGGACATGG
Motif Score 4.065041667
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; MT4; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000550804.6; ENST00000430117.6; ENST00000546443.5; ENST00000548263.5
External Link RMBase: m6A_site_190584
mod ID: M6ASITE012904 Click to Show/Hide the Full List
mod site chr12:53712335-53712336:- [4]
Sequence ATGGGCTCTGCACTGCAGAGACCAGCAGGGACTAAAGAAGA
Motif Score 2.876744048
Cell/Tissue List HeLa; HepG2; HEK293T; H1A; H1B; hNPCs; hESCs; fibroblasts; A549; LCLs; CD8T; MT4; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List ENST00000548263.5; ENST00000430117.6; ENST00000546443.5; ENST00000550804.6; ENST00000262059.8
External Link RMBase: m6A_site_190585
mod ID: M6ASITE012905 Click to Show/Hide the Full List
mod site chr12:53712418-53712419:- [4]
Sequence AAGATGAAGGACGATGTCAGACTCATTTTCAGCCTCATTAG
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; fibroblasts; MT4; Jurkat; HEK293A-TOA; MSC; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000430117.6; ENST00000262059.8; ENST00000548263.5; ENST00000546443.5; ENST00000550804.6
External Link RMBase: m6A_site_190586
mod ID: M6ASITE012906 Click to Show/Hide the Full List
mod site chr12:53712703-53712704:- [4]
Sequence GGGATAGGAGCAGAGAGAAGACTGGGATCCAGCATCCATCT
Motif Score 3.319380952
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000430117.6; ENST00000546443.5; ENST00000548263.5; ENST00000550804.6; ENST00000262059.8
External Link RMBase: m6A_site_190587
mod ID: M6ASITE012907 Click to Show/Hide the Full List
mod site chr12:53713032-53713033:- [4]
Sequence GGGAAAGGGCATCTGTGTGGACAGTCACCAGGCCCTGCTCC
Motif Score 3.643047619
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000548263.5; ENST00000262059.8; ENST00000430117.6; ENST00000546443.5; ENST00000550804.6
External Link RMBase: m6A_site_190588
mod ID: M6ASITE012908 Click to Show/Hide the Full List
mod site chr12:53713128-53713129:- [4]
Sequence GCCAACTTACTGCTTCCTGAACTGGGCAGTGCCTTCTATGA
Motif Score 3.373380952
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000548263.5; ENST00000430117.6; ENST00000262059.8; ENST00000550804.6; ENST00000546443.5
External Link RMBase: m6A_site_190589
mod ID: M6ASITE012909 Click to Show/Hide the Full List
mod site chr12:53713716-53713717:- [4]
Sequence CCTCTCTGGGCCAGCTGAGGACAGTAGCTCTGACTCGGTGA
Motif Score 3.643047619
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000262059.8; ENST00000549935.6; ENST00000546443.5; ENST00000548263.5; ENST00000430117.6; ENST00000550804.6
External Link RMBase: m6A_site_190590
mod ID: M6ASITE012910 Click to Show/Hide the Full List
mod site chr12:53713815-53713816:- [4]
Sequence TGGCCTTTGTGAGCGTGGAGACCCAGGCTCCTCTCCTGCTG
Motif Score 2.876744048
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000550804.6; ENST00000430117.6; ENST00000549935.6; ENST00000262059.8; ENST00000548263.5; ENST00000546443.5
External Link RMBase: m6A_site_190591
mod ID: M6ASITE012911 Click to Show/Hide the Full List
mod site chr12:53713854-53713855:- [4]
Sequence AGAGGACGAGTCCCCAGAAGACATGAGGCTCCCACCCTATG
Motif Score 2.897386905
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000548263.5; ENST00000262059.8; ENST00000546443.5; ENST00000550804.6; ENST00000549935.6; ENST00000430117.6
External Link RMBase: m6A_site_190592
mod ID: M6ASITE012912 Click to Show/Hide the Full List
mod site chr12:53713878-53713879:- [4]
Sequence CTGCCCGGCAGCTCTGACAGACTCAGAGGACGAGTCCCCAG
Motif Score 3.319380952
Cell/Tissue List HeLa; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000430117.6; ENST00000549935.6; ENST00000262059.8; ENST00000548263.5; ENST00000550804.6; ENST00000546443.5
External Link RMBase: m6A_site_190593
mod ID: M6ASITE012913 Click to Show/Hide the Full List
mod site chr12:53714227-53714228:- [6]
Sequence ATTCCAGGAATTGCTAGAGTACATGAGAAAGCTAGAGGCCC
Motif Score 2.856142857
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000549613.1; ENST00000549935.6; ENST00000550804.6; ENST00000262059.8; ENST00000548263.5; ENST00000430117.6; ENST00000546443.5
External Link RMBase: m6A_site_190594
mod ID: M6ASITE012914 Click to Show/Hide the Full List
mod site chr12:53714600-53714601:- [4]
Sequence GAGCAGTTACAGGAGGAGAAACAGGTGAGCACCCATAACCC
Motif Score 2.20572619
Cell/Tissue List HeLa; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000550804.6; ENST00000548263.5; ENST00000549935.6; ENST00000262059.8; ENST00000430117.6; ENST00000546443.5; ENST00000549613.1
External Link RMBase: m6A_site_190595
mod ID: M6ASITE012915 Click to Show/Hide the Full List
mod site chr12:53714690-53714691:- [5]
Sequence TGGGCCCTCTTCCCTCAGGTACAGTTGTCAGAAAGTAAGCG
Motif Score 2.856142857
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000262059.8; ENST00000430117.6; ENST00000550804.6; ENST00000549613.1; ENST00000549935.6; ENST00000548263.5
External Link RMBase: m6A_site_190596
mod ID: M6ASITE012916 Click to Show/Hide the Full List
mod site chr12:53715231-53715232:- [4]
Sequence CCCAAAACCAAGTGTTCAAGACTGAGCTGGCCCGGGAGAAG
Motif Score 3.319380952
Cell/Tissue List HeLa; HEK293T; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; CD4T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000549935.6; ENST00000550804.6; ENST00000549613.1; ENST00000430117.6; ENST00000548263.5
External Link RMBase: m6A_site_190597
mod ID: M6ASITE012917 Click to Show/Hide the Full List
mod site chr12:53715245-53715246:- [4]
Sequence TCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAGACTGAGC
Motif Score 2.185083333
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000548263.5; ENST00000549613.1; ENST00000549935.6; ENST00000550804.6; ENST00000262059.8; ENST00000430117.6
External Link RMBase: m6A_site_190598
mod ID: M6ASITE012918 Click to Show/Hide the Full List
mod site chr12:53715252-53715253:- [4]
Sequence AGGCAGTTCAGGAGGAGAGGACCCAAAACCAAGTGTTCAAG
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000430117.6; ENST00000549613.1; ENST00000548263.5; ENST00000549935.6; ENST00000550804.6; ENST00000262059.8
External Link RMBase: m6A_site_190599
mod ID: M6ASITE012919 Click to Show/Hide the Full List
mod site chr12:53715314-53715315:- [4]
Sequence TATCTCTCAGGCAGAGAAGGACAAGATCCTGAAGCTGAGTG
Motif Score 3.643047619
Cell/Tissue List HeLa; HepG2; HEK293T; hESC-HEK293T; U2OS; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List ENST00000549613.1; ENST00000430117.6; ENST00000549935.6; ENST00000262059.8; ENST00000550804.6; ENST00000548263.5
External Link RMBase: m6A_site_190600
mod ID: M6ASITE012920 Click to Show/Hide the Full List
mod site chr12:53715685-53715686:- [4]
Sequence GGAGAGAAGAGGGGTTGAGAACCTTAGAGGACTTGGGTGGA
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; HEK293T; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000550804.6; ENST00000549935.6; ENST00000430117.6; ENST00000552282.1; ENST00000548263.5; ENST00000549613.1; ENST00000262059.8
External Link RMBase: m6A_site_190601
mod ID: M6ASITE012921 Click to Show/Hide the Full List
mod site chr12:53715716-53715717:- [4]
Sequence GGACTCCTACATGTGGTCAGACCCTCTGGGAGGAGAGAAGA
Motif Score 2.876744048
Cell/Tissue List HeLa; HEK293T; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000552282.1; ENST00000550804.6; ENST00000549935.6; ENST00000262059.8; ENST00000430117.6; ENST00000548263.5; ENST00000549613.1
External Link RMBase: m6A_site_190602
mod ID: M6ASITE012922 Click to Show/Hide the Full List
mod site chr12:53715734-53715735:- [4]
Sequence CTGCCCCCACCTCTGTGGGGACTCCTACATGTGGTCAGACC
Motif Score 4.065041667
Cell/Tissue List HeLa; HEK293T; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000548263.5; ENST00000550804.6; ENST00000549935.6; ENST00000430117.6; ENST00000549613.1; ENST00000552282.1; ENST00000262059.8
External Link RMBase: m6A_site_190603
mod ID: M6ASITE012923 Click to Show/Hide the Full List
mod site chr12:53715912-53715913:- [6]
Sequence GACCGCACCATAGCCGAACTACACCGCAGCCGCCTGGAAGT
Motif Score 2.078666667
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000550804.6; ENST00000430117.6; ENST00000549613.1; ENST00000262059.8; ENST00000552282.1; ENST00000549935.6; ENST00000548263.5
External Link RMBase: m6A_site_190604
mod ID: M6ASITE012924 Click to Show/Hide the Full List
mod site chr12:53715915-53715916:- [4]
Sequence AGGGACCGCACCATAGCCGAACTACACCGCAGCCGCCTGGA
Motif Score 3.373380952
Cell/Tissue List HeLa; HepG2; U2OS; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000550804.6; ENST00000548263.5; ENST00000430117.6; ENST00000549935.6; ENST00000549613.1; ENST00000552282.1
External Link RMBase: m6A_site_190605
mod ID: M6ASITE012925 Click to Show/Hide the Full List
mod site chr12:53715931-53715932:- [4]
Sequence CAGTGCAGCAGCAGCCAGGGACCGCACCATAGCCGAACTAC
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; U2OS; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000549935.6; ENST00000548263.5; ENST00000550804.6; ENST00000430117.6; ENST00000552282.1; ENST00000549613.1
External Link RMBase: m6A_site_190606
mod ID: M6ASITE012926 Click to Show/Hide the Full List
mod site chr12:53716078-53716079:- [4]
Sequence TGATGAATGATTCACTAGGAACTCTGATCTCCATCTCCTCC
Motif Score 3.373380952
Cell/Tissue List HeLa; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293T; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq
Transcript ID List ENST00000430117.6; ENST00000550804.6; ENST00000549935.6; ENST00000549613.1; ENST00000548263.5; ENST00000552282.1; ENST00000262059.8
External Link RMBase: m6A_site_190607
mod ID: M6ASITE012927 Click to Show/Hide the Full List
mod site chr12:53716155-53716156:- [4]
Sequence GAGACATGGCTAAAGACTAAACAACACAACCCCGAGTCCTA
Motif Score 2.20572619
Cell/Tissue List HeLa; MM6; Jurkat; CD4T; GSC-11; HEK293T; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000548263.5; ENST00000549935.6; ENST00000550804.6; ENST00000430117.6; ENST00000549613.1; ENST00000262059.8; ENST00000552282.1
External Link RMBase: m6A_site_190608
mod ID: M6ASITE012928 Click to Show/Hide the Full List
mod site chr12:53716160-53716161:- [4]
Sequence GGGGAGAGACATGGCTAAAGACTAAACAACACAACCCCGAG
Motif Score 3.319380952
Cell/Tissue List HeLa; MM6; Jurkat; CD4T; GSC-11; HEK293T; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000549613.1; ENST00000549935.6; ENST00000552282.1; ENST00000430117.6; ENST00000548263.5; ENST00000550804.6
External Link RMBase: m6A_site_190609
mod ID: M6ASITE012929 Click to Show/Hide the Full List
mod site chr12:53716172-53716173:- [4]
Sequence GTCTAAAGAGAAGGGGAGAGACATGGCTAAAGACTAAACAA
Motif Score 2.897386905
Cell/Tissue List HeLa; MM6; Jurkat; CD4T; GSC-11; HEK293T; MSC; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000552282.1; ENST00000548263.5; ENST00000549935.6; ENST00000550804.6; ENST00000430117.6; ENST00000262059.8; ENST00000549613.1
External Link RMBase: m6A_site_190610
mod ID: M6ASITE012930 Click to Show/Hide the Full List
mod site chr12:53716287-53716288:- [4]
Sequence CAAGGTGGCCCAGATGAAGGACACCCTAGGCCAGGCCCAGC
Motif Score 3.643047619
Cell/Tissue List HeLa; hESC-HEK293T; U2OS; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000548263.5; ENST00000262059.8; ENST00000549935.6; ENST00000550804.6; ENST00000430117.6; ENST00000549613.1; ENST00000552282.1
External Link RMBase: m6A_site_190611
mod ID: M6ASITE012931 Click to Show/Hide the Full List
mod site chr12:53716308-53716309:- [4]
Sequence TCAGGCTCAGCGACTGAAAGACAAGGTGGCCCAGATGAAGG
Motif Score 2.897386905
Cell/Tissue List HeLa; hESC-HEK293T; U2OS; fibroblasts; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List ENST00000552282.1; ENST00000548263.5; ENST00000430117.6; ENST00000549935.6; ENST00000550804.6; ENST00000262059.8; ENST00000549613.1
External Link RMBase: m6A_site_190612
mod ID: M6ASITE012932 Click to Show/Hide the Full List
mod site chr12:53716368-53716369:- [4]
Sequence GAACCATCACTTAAATTTGGACCTGAAGGAGGCGAAGAGCT
Motif Score 3.622404762
Cell/Tissue List HeLa; HepG2; U2OS; hNPCs; fibroblasts; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000549935.6; ENST00000548263.5; ENST00000262059.8; ENST00000550804.6; ENST00000552282.1; ENST00000430117.6
External Link RMBase: m6A_site_190613
mod ID: M6ASITE012933 Click to Show/Hide the Full List
mod site chr12:53716386-53716387:- [4]
Sequence CCAAGTGGCACAACAGGAGAACCATCACTTAAATTTGGACC
Motif Score 2.930744048
Cell/Tissue List HeLa; HepG2; U2OS; hNPCs; fibroblasts; LCLs; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; HEC-1-A; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000548263.5; ENST00000552282.1; ENST00000550804.6; ENST00000549935.6; ENST00000430117.6
External Link RMBase: m6A_site_190614
mod ID: M6ASITE012934 Click to Show/Hide the Full List
mod site chr12:53719754-53719755:- [4]
Sequence ACTGAAAGAAGTACAAGCAGACAAGGAGCAAAGTGAGGTAA
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000549935.6; ENST00000550804.6; ENST00000548263.5; ENST00000430117.6; ENST00000552282.1
External Link RMBase: m6A_site_190615
mod ID: M6ASITE012935 Click to Show/Hide the Full List
mod site chr12:53719795-53719796:- [4]
Sequence GTGAAGGCCCTGACTCGGGAACAAGAGAAGCTCCTTGGGCA
Motif Score 2.951386905
Cell/Tissue List HeLa; CD34; HepG2; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000550804.6; ENST00000430117.6; ENST00000262059.8; ENST00000548263.5; ENST00000547988.5; ENST00000549935.6
External Link RMBase: m6A_site_190616
mod ID: M6ASITE012936 Click to Show/Hide the Full List
mod site chr12:53719820-53719821:- [4]
Sequence CACCAATCACAGGCTTAGAGACACAGTGAAGGCCCTGACTC
Motif Score 2.897386905
Cell/Tissue List HeLa; CD34; HepG2; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547988.5; ENST00000550804.6; ENST00000548263.5; ENST00000262059.8; ENST00000549935.6; ENST00000430117.6
External Link RMBase: m6A_site_190617
mod ID: M6ASITE012937 Click to Show/Hide the Full List
mod site chr12:53721469-53721470:- [4]
Sequence GACGAAGGAAGTGGAGCTGGACAGGTGAGGGGAGTCCACTG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; HepG2; U2OS; hNPCs; fibroblasts; LCLs; MT4; MM6; Huh7; Jurkat; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000262059.8; ENST00000549935.6; ENST00000430117.6; ENST00000547988.5; ENST00000548263.5; ENST00000550804.6
External Link RMBase: m6A_site_190618
mod ID: M6ASITE012938 Click to Show/Hide the Full List
mod site chr12:53721509-53721510:- [4]
Sequence AGCTAGAGGATGACATCCAGACCATCAGTGAGAAAGTGCTG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; U2OS; hNPCs; MT4; MM6; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000549935.6; ENST00000262059.8; ENST00000548263.5; ENST00000430117.6; ENST00000550804.6; ENST00000547988.5
External Link RMBase: m6A_site_190619
mod ID: M6ASITE012939 Click to Show/Hide the Full List
mod site chr12:53721517-53721518:- [6]
Sequence CATCCTGGAGCTAGAGGATGACATCCAGACCATCAGTGAGA
Motif Score 2.859755952
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000550804.6; ENST00000548263.5; ENST00000430117.6; ENST00000262059.8; ENST00000547988.5; ENST00000549935.6
External Link RMBase: m6A_site_190620
mod ID: M6ASITE012940 Click to Show/Hide the Full List
mod site chr12:53721550-53721551:- [4]
Sequence CCTGAGCCGGCAACAGGGAGACCATGTGGCACGCATCCTGG
Motif Score 2.876744048
Cell/Tissue List HeLa; CD34; U2OS; hNPCs; MT4; MM6; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000430117.6; ENST00000549935.6; ENST00000550804.6; ENST00000262059.8; ENST00000547988.5; ENST00000548263.5
External Link RMBase: m6A_site_190621
mod ID: M6ASITE012941 Click to Show/Hide the Full List
mod site chr12:53721574-53721575:- [4]
Sequence GGAGATCACAGAAGAGAGGGACATCCTGAGCCGGCAACAGG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; U2OS; MT4; Huh7; CD4T; peripheral-blood; HEK293T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000550804.6; ENST00000262059.8; ENST00000548263.5; ENST00000430117.6; ENST00000549935.6; ENST00000547988.5
External Link RMBase: m6A_site_190622
mod ID: M6ASITE012942 Click to Show/Hide the Full List
mod site chr12:53721626-53721627:- [4]
Sequence TCCCTTTTCTTCTGGGGGAAACTTAATTTCAGGGGATTTCC
Motif Score 2.627720238
Cell/Tissue List HeLa; U2OS; MT4; HEK293T; endometrial
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547988.5; ENST00000262059.8; ENST00000548263.5; ENST00000550804.6; ENST00000430117.6; ENST00000549935.6
External Link RMBase: m6A_site_190623
mod ID: M6ASITE012943 Click to Show/Hide the Full List
mod site chr12:53721703-53721704:- [4]
Sequence AGCCAGGTGGAAGCAGTCAGACCCTGGTGTGCTCTTCCTAA
Motif Score 2.876744048
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000548263.5; ENST00000430117.6; ENST00000549935.6; ENST00000550804.6; ENST00000547988.5; ENST00000262059.8
External Link RMBase: m6A_site_190624
mod ID: M6ASITE012944 Click to Show/Hide the Full List
mod site chr12:53722000-53722001:- [4]
Sequence GGAGCTGGGCCAGGTAGGGGACAGGGCCTGGCTGCTCACCC
Motif Score 3.643047619
Cell/Tissue List HeLa; MT4; Jurkat; CD4T; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000549935.6; ENST00000548263.5; ENST00000430117.6; ENST00000262059.8; ENST00000550804.6; ENST00000547988.5
External Link RMBase: m6A_site_190625
mod ID: M6ASITE012945 Click to Show/Hide the Full List
mod site chr12:53722033-53722034:- [4]
Sequence GAGCACACGGAGCTGATGGAACAGTACAAGGTGGGAGCTGG
Motif Score 2.951386905
Cell/Tissue List HeLa; MT4; Jurkat; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000547988.5; ENST00000430117.6; ENST00000548263.5; ENST00000550804.6; ENST00000262059.8; ENST00000549935.6
External Link RMBase: m6A_site_190626
mod ID: M6ASITE012946 Click to Show/Hide the Full List
mod site chr12:53722117-53722118:- [4]
Sequence CTGAAGCTACAGCTGGAGGGACAGGTGACAGAGCTGAGGAG
Motif Score 3.643047619
Cell/Tissue List HeLa; CD34; MT4; Jurkat; endometrial; NB4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000430117.6; ENST00000549935.6; ENST00000547988.5; ENST00000262059.8; ENST00000548263.5; ENST00000550804.6
External Link RMBase: m6A_site_190627
mod ID: M6ASITE012947 Click to Show/Hide the Full List
mod site chr12:53723561-53723562:- [8]
Sequence AGCAACAGAGTTATTCCCAGACAAGGGAGTGGGAGACAGCA
Motif Score 2.897386905
Cell/Tissue List CD34; endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000547988.5; ENST00000550804.6; ENST00000548263.5; ENST00000547949.6; ENST00000546619.5; ENST00000551900.5; ENST00000553154.5; ENST00000430117.6; ENST00000262059.8; ENST00000549935.6
External Link RMBase: m6A_site_190628
mod ID: M6ASITE012948 Click to Show/Hide the Full List
mod site chr12:53723595-53723596:- [5]
Sequence GTCCCCAAGGCAACTGTGTTACAGGTGAGAAAAGAGCAACA
Motif Score 2.07285119
Cell/Tissue List brain
Seq Type List m6A-REF-seq
Transcript ID List ENST00000262059.8; ENST00000551900.5; ENST00000548263.5; ENST00000547949.6; ENST00000549784.5; ENST00000549935.6; ENST00000547988.5; ENST00000430117.6; ENST00000546619.5; ENST00000550804.6; ENST00000553154.5
External Link RMBase: m6A_site_190629
mod ID: M6ASITE012949 Click to Show/Hide the Full List
mod site chr12:53724718-53724719:- [6]
Sequence TGCCTGTGTTCGGGATTACCACACATTTGTGTGGTCTTCCG
Motif Score 2.053113095
Cell/Tissue List hESC-HEK293T
Seq Type List MAZTER-seq
Transcript ID List ENST00000549935.6; ENST00000549173.5; ENST00000552623.5; ENST00000546619.5; ENST00000551900.5; ENST00000549349.5; ENST00000547885.5; ENST00000550804.6; ENST00000548431.1; ENST00000553154.5; ENST00000546774.1; ENST00000548177.5; ENST00000549784.5; ENST00000430117.6; ENST00000262059.8; ENST00000547988.5; ENST00000549688.1; ENST00000548263.5; ENST00000547949.6
External Link RMBase: m6A_site_190630
mod ID: M6ASITE012950 Click to Show/Hide the Full List
mod site chr12:53725175-53725176:- [4]
Sequence ACTTTCTCAATGTAGCCCGGACCTACATCCCCAACACCAAG
Motif Score 3.622404762
Cell/Tissue List HeLa; MT4
Seq Type List m6A-seq; MeRIP-seq
Transcript ID List ENST00000546774.1; ENST00000547949.6; ENST00000552623.5; ENST00000549688.1; ENST00000547988.5; ENST00000547885.5; ENST00000549173.5; ENST00000430117.6; ENST00000546619.5; ENST00000553154.5; ENST00000549935.6; ENST00000262059.8; ENST00000548431.1; ENST00000549784.5; ENST00000549349.5; ENST00000551900.5; ENST00000548177.5; ENST00000548263.5; ENST00000550804.6
External Link RMBase: m6A_site_190631