m6A Target Gene Information

General Information of the m6A Target Gene (ID: M6ATAR00895)

Target Name	Progestin and adipoQ receptor family member 4 (PAQR4)
Synonyms	Progestin and adipoQ receptor family member IV Click to Show/Hide
Gene Name	PAQR4
Chromosomal Location	16p13.3
Family	ADIPOR family
Gene ID	124222
Uniprot ID	PAQR4_HUMAN
HGNC ID	HGNC:26386
KEGG ID	hsa:124222

Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator

DNA modification

m6A Regulator: Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2BP1)

Regulator Info

In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT02201		Crosstalk Info
Epigenetic Regulator	Cysteine methyltransferase DNMT3A (DNMT3A)
Regulated Target	Protein tyrosine phosphatase non-receptor type 13 (PTPN13)
Crosstalk relationship	DNA modification → m6A
Disease	Liver cancer	Disease Info

Histone modification

m6A Regulator: RNA demethylase ALKBH5 (ALKBH5)

Regulator Info

In total 1 item(s) under this m6A regulator
Crosstalk ID: M6ACROT03536		Crosstalk Info
Epigenetic Regulator	WD repeat-containing protein 5 (WDR5)
Regulated Target	Histone H3 lysine 4 trimethylation (H3K4me3)
Crosstalk relationship	Histone modification → m6A
Disease	Liver cancer	Disease Info

RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00895)

Progestin and adipoQ receptor family member 4 (PAQR4)

5-methylcytidine (m5C)

In total 9 m6A sequence/site(s) in this target gene
mod ID: M5CSITE000562		Click to Show/Hide the Full List
mod site	chr16:2969873-2969874:+
Sequence	CGCAACGCGCTTCCCACACCCCCGGCCGCCCTACCTGCGTT
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000576565.1; ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m5C_site_15103
mod ID: M5CSITE000563		Click to Show/Hide the Full List
mod site	chr16:2969874-2969875:+
Sequence	GCAACGCGCTTCCCACACCCCCGGCCGCCCTACCTGCGTTG
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12; ENST00000576565.1
External Link	RMBase: m5C_site_15104
mod ID: M5CSITE000564		Click to Show/Hide the Full List
mod site	chr16:2969875-2969876:+
Sequence	CAACGCGCTTCCCACACCCCCGGCCGCCCTACCTGCGTTGG
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8; ENST00000576565.1
External Link	RMBase: m5C_site_15105
mod ID: M5CSITE000565		Click to Show/Hide the Full List
mod site	chr16:2969878-2969879:+
Sequence	CGCGCTTCCCACACCCCCGGCCGCCCTACCTGCGTTGGGCC
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12; ENST00000576565.1
External Link	RMBase: m5C_site_15106
mod ID: M5CSITE000566		Click to Show/Hide the Full List
mod site	chr16:2969897-2969898:+
Sequence	GCCGCCCTACCTGCGTTGGGCCGGGGGCACTGAGGCCGAGG
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000576565.1; ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m5C_site_15107
mod ID: M5CSITE000567		Click to Show/Hide the Full List
mod site	chr16:2969898-2969899:+
Sequence	CCGCCCTACCTGCGTTGGGCCGGGGGCACTGAGGCCGAGGA
Cell/Tissue List	T24
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12; ENST00000576565.1
External Link	RMBase: m5C_site_15108
mod ID: M5CSITE000576		Click to Show/Hide the Full List
mod site	chr16:2971648-2971649:+		[2]
Sequence	CCTCCACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCT
Seq Type List	Bisulfite-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000576565.1; ENST00000318782.8; ENST00000574988.1
External Link	RMBase: m5C_site_15117
mod ID: M5CSITE000577		Click to Show/Hide the Full List
mod site	chr16:2971715-2971716:+
Sequence	CCGGGGAGTGGGTCTGGGTTCAGGGGCTCCAGGCTCCCTGC
Cell/Tissue List	HeLa
Seq Type List	m5C-RIP-seq
Transcript ID List	ENST00000576565.1; ENST00000318782.8; ENST00000572687.1; ENST00000574988.1; ENST00000293978.12
External Link	RMBase: m5C_site_15118
mod ID: M5CSITE000578		Click to Show/Hide the Full List
mod site	chr16:2972794-2972795:+		[2]
Sequence	GACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGC
Cell/Tissue List	frontalcortex; testis; HeLa; T24
Seq Type List	Bisulfite-seq; m5C-RIP-seq
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1
External Link	RMBase: m5C_site_15119

N6-methyladenosine (m6A)

In total 59 m6A sequence/site(s) in this target gene
mod ID: M6ASITE025623		Click to Show/Hide the Full List
mod site	chr16:2969353-2969354:+		[3]
Sequence	GTCCTCCTGGCTGCAGAGAGACTACCGGCCACCGCCGCCGC
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; A549; HEK293A-TOA; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000576565.1
External Link	RMBase: m6A_site_303964
mod ID: M6ASITE025624		Click to Show/Hide the Full List
mod site	chr16:2969481-2969482:+		[4]
Sequence	CCCCGGCGCGGGGGCGACGGACTCGCGCGTGCGCAGCGCCG
Motif Score	4.065041667
Cell/Tissue List	HeLa; A549; U2OS; GSC-11; HEK293T; HEK293A-TOA; MSC; iSLK; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000576565.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_303965
mod ID: M6ASITE025625		Click to Show/Hide the Full List
mod site	chr16:2969519-2969520:+		[4]
Sequence	CCGGAGGGGCGCGGGCTGGGACCCCCTAGCCAGCGCGTGCG
Motif Score	3.622404762
Cell/Tissue List	HeLa; A549; U2OS; MT4; GSC-11; HEK293T; HEK293A-TOA; TREX; iSLK
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000576565.1
External Link	RMBase: m6A_site_303966
mod ID: M6ASITE025626		Click to Show/Hide the Full List
mod site	chr16:2969638-2969639:+		[4]
Sequence	ACTGAGGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCC
Motif Score	3.643047619
Cell/Tissue List	HeLa; A549; GSC-11; HEK293T; HEK293A-TOA; TREX; iSLK; MSC; TIME
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000576565.1; ENST00000572687.1
External Link	RMBase: m6A_site_303967
mod ID: M6ASITE025627		Click to Show/Hide the Full List
mod site	chr16:2969671-2969672:+		[3]
Sequence	GGGCTGCCCGCGCGGTGCGGACCATGGCGTTCCTGGCCGGG
Motif Score	3.622404762
Cell/Tissue List	HeLa; A549; GSC-11; HEK293T; HEK293A-TOA; MSC; TREX; iSLK; MM6
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000576565.1; ENST00000293978.12
External Link	RMBase: m6A_site_303968
mod ID: M6ASITE025628		Click to Show/Hide the Full List
mod site	chr16:2969705-2969706:+		[3]
Sequence	GGCCGGGCCGCGCCTGCTGGACTGGGCCAGCTCGCCGCCGC
Motif Score	4.065041667
Cell/Tissue List	HeLa; A549; MT4; GSC-11; HEK293T; HEK293A-TOA; iSLK; MSC
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000576565.1; ENST00000293978.12
External Link	RMBase: m6A_site_303969
mod ID: M6ASITE025629		Click to Show/Hide the Full List
mod site	chr16:2969817-2969818:+		[5]
Sequence	CTCTTCTACCTGCACAACGAACTGGGCAACATCTACACGCA
Motif Score	3.373380952
Cell/Tissue List	MT4; HEK293A-TOA; iSLK; TREX
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000576565.1; ENST00000293978.12
External Link	RMBase: m6A_site_303970
mod ID: M6ASITE025630		Click to Show/Hide the Full List
mod site	chr16:2969831-2969832:+		[6]
Sequence	CAACGAACTGGGCAACATCTACACGCACGGTGAGCCGCGTC
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000572687.1; ENST00000576565.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_303971
mod ID: M6ASITE025634		Click to Show/Hide the Full List
mod site	chr16:2971063-2971064:+		[4]
Sequence	TGGATGACAGCATTACCTGGACCTGTCTTGCCCTGTCCTGT
Motif Score	3.622404762
Cell/Tissue List	HeLa; HEK293A-TOA; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000574988.1; ENST00000293978.12; ENST00000576565.1; ENST00000318782.8
External Link	RMBase: m6A_site_303975
mod ID: M6ASITE025635		Click to Show/Hide the Full List
mod site	chr16:2971095-2971096:+		[4]
Sequence	CTGTCCTGTGTTGTGTCTGAACCGTGGTCCCCTTGAGGATG
Motif Score	2.930744048
Cell/Tissue List	HeLa; HEK293A-TOA; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000574988.1; ENST00000293978.12; ENST00000318782.8; ENST00000576565.1
External Link	RMBase: m6A_site_303976
mod ID: M6ASITE025636		Click to Show/Hide the Full List
mod site	chr16:2971124-2971125:+		[4]
Sequence	CCCTTGAGGATGTGACTGAAACTATCTGGTAGATGACTGTC
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293A-TOA; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000574988.1; ENST00000293978.12; ENST00000572687.1; ENST00000318782.8; ENST00000576565.1
External Link	RMBase: m6A_site_303977
mod ID: M6ASITE025637		Click to Show/Hide the Full List
mod site	chr16:2971239-2971240:+		[6]
Sequence	AGGATGGCTGGCTGGGAGGCACACATTGCGTGGCCTGCCTT
Motif Score	2.830589286
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1; ENST00000576565.1; ENST00000574988.1
External Link	RMBase: m6A_site_303978
mod ID: M6ASITE025638		Click to Show/Hide the Full List
mod site	chr16:2971345-2971346:+		[4]
Sequence	CGCCCGGCTCCTCGCCCTGGACATGTGTGGGGTCTGCCTTG
Motif Score	3.643047619
Cell/Tissue List	HeLa; hESC-HEK293T; peripheral-blood; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MAZTER-seq; MeRIP-seq
Transcript ID List	ENST00000574988.1; ENST00000572687.1; ENST00000576565.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_303979
mod ID: M6ASITE025639		Click to Show/Hide the Full List
mod site	chr16:2971369-2971370:+		[6]
Sequence	GTGTGGGGTCTGCCTTGTCAACACCCTTGGTGAGTCAGGGC
Motif Score	2.173910714
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000572687.1; ENST00000574988.1; ENST00000293978.12; ENST00000576565.1; ENST00000318782.8
External Link	RMBase: m6A_site_303980
mod ID: M6ASITE025640		Click to Show/Hide the Full List
mod site	chr16:2971583-2971584:+		[6]
Sequence	CCCGGCTGCCCTGGTGGGCTACACTGTGTTGTCGGGTGTGG
Motif Score	2.078666667
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000576565.1; ENST00000293978.12; ENST00000574988.1; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_303981
mod ID: M6ASITE025643		Click to Show/Hide the Full List
mod site	chr16:2971776-2971777:+		[4]
Sequence	GCACTGGCGCTGCTTGGGGGACTGGTAAATGTAGCCCGTCT
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000576565.1; ENST00000318782.8; ENST00000574988.1; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_303984
mod ID: M6ASITE025644		Click to Show/Hide the Full List
mod site	chr16:2971812-2971813:+		[4]
Sequence	CGTCTGCCCGAGCGCTGGGGACCTGGCCGCTTTGACTACTG
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4; AML
Seq Type List	m6A-seq; MeRIP-seq; miCLIP
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000574988.1; ENST00000576565.1; ENST00000293978.12
External Link	RMBase: m6A_site_303985
mod ID: M6ASITE025645		Click to Show/Hide the Full List
mod site	chr16:2971838-2971839:+		[7]
Sequence	CCGCTTTGACTACTGGGGCAACTCCCACCAGATCATGCACC
Motif Score	2.595904762
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000293978.12; ENST00000574988.1; ENST00000572687.1; ENST00000318782.8; ENST00000576565.1
External Link	RMBase: m6A_site_303986
mod ID: M6ASITE025647		Click to Show/Hide the Full List
mod site	chr16:2971943-2971944:+		[4]
Sequence	CCACCACGCCTGTCCCCGGGACTGAGCTGCCATGCCAGCCT
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000318782.8; ENST00000576565.1; ENST00000574988.1
External Link	RMBase: m6A_site_303988
mod ID: M6ASITE025651		Click to Show/Hide the Full List
mod site	chr16:2972097-2972098:+		[4]
Sequence	TCACCCGTTCTTCCCTGTGGACTGACCTCTTCCACCCACGC
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_303992
mod ID: M6ASITE025652		Click to Show/Hide the Full List
mod site	chr16:2972101-2972102:+		[7]
Sequence	CCGTTCTTCCCTGTGGACTGACCTCTTCCACCCACGCCGTG
Motif Score	2.839113095
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_303993
mod ID: M6ASITE025653		Click to Show/Hide the Full List
mod site	chr16:2972130-2972131:+		[7]
Sequence	ACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCTTTTCC
Motif Score	2.595904762
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_303994
mod ID: M6ASITE025654		Click to Show/Hide the Full List
mod site	chr16:2972168-2972169:+		[7]
Sequence	TCCCTCCAAGCTCCTATTTTACTGTGTCAGCTGGAAGGAAA
Motif Score	2.494845238
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; rmsk_4441748; ENST00000572687.1
External Link	RMBase: m6A_site_303995
mod ID: M6ASITE025655		Click to Show/Hide the Full List
mod site	chr16:2972188-2972189:+		[4]
Sequence	ACTGTGTCAGCTGGAAGGAAACCTTTCCCTCTTGGGACCTC
Motif Score	2.185083333
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000293978.12; rmsk_4441748; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_303996
mod ID: M6ASITE025656		Click to Show/Hide the Full List
mod site	chr16:2972204-2972205:+		[4]
Sequence	GGAAACCTTTCCCTCTTGGGACCTCTTTACCCTCTGTGACC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12; rmsk_4441748
External Link	RMBase: m6A_site_303997
mod ID: M6ASITE025657		Click to Show/Hide the Full List
mod site	chr16:2972236-2972237:+		[4]
Sequence	TCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGGGGT
Motif Score	2.876744048
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; rmsk_4441748; ENST00000572687.1
External Link	RMBase: m6A_site_303998
mod ID: M6ASITE025658		Click to Show/Hide the Full List
mod site	chr16:2972247-2972248:+		[4]
Sequence	TGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCT
Motif Score	4.065041667
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; rmsk_4441748; ENST00000572687.1
External Link	RMBase: m6A_site_303999
mod ID: M6ASITE025659		Click to Show/Hide the Full List
mod site	chr16:2972398-2972399:+		[8]
Sequence	TACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGGCT
Motif Score	2.053113095
Cell/Tissue List	brain; hESC-HEK293T
Seq Type List	m6A-REF-seq; MAZTER-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_304000
mod ID: M6ASITE025660		Click to Show/Hide the Full List
mod site	chr16:2972433-2972434:+		[4]
Sequence	CTGGCTCCCTCTGCCCAGAGACTATGGAGTAAGGCATTCAG
Motif Score	3.319380952
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_304001
mod ID: M6ASITE025661		Click to Show/Hide the Full List
mod site	chr16:2972455-2972456:+		[4]
Sequence	TATGGAGTAAGGCATTCAGGACAAAAGGACCAAGGGGGCGT
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; HEK293T; brain; A549; hESC-HEK293T; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq; m6A-REF-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304002
mod ID: M6ASITE025662		Click to Show/Hide the Full List
mod site	chr16:2972463-2972464:+		[4]
Sequence	AAGGCATTCAGGACAAAAGGACCAAGGGGGCGTGGACCCGT
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Huh7; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_304003
mod ID: M6ASITE025663		Click to Show/Hide the Full List
mod site	chr16:2972478-2972479:+		[4]
Sequence	AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq; m6A-CLIP/IP
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304004
mod ID: M6ASITE025664		Click to Show/Hide the Full List
mod site	chr16:2972535-2972536:+		[4]
Sequence	GCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCG
Motif Score	2.627720238
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; LCLs; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304005
mod ID: M6ASITE025665		Click to Show/Hide the Full List
mod site	chr16:2972539-2972540:+		[6]
Sequence	CTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCT
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1
External Link	RMBase: m6A_site_304006
mod ID: M6ASITE025666		Click to Show/Hide the Full List
mod site	chr16:2972571-2972572:+		[4]
Sequence	CAGCGGCCTCAGATCCTGGGACCCCTGGGCCGTGCCTGCCC
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; U2OS; H1A; H1B; hNPCs; hESCs; fibroblasts; GM12878; H1299; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12
External Link	RMBase: m6A_site_304007
mod ID: M6ASITE025667		Click to Show/Hide the Full List
mod site	chr16:2972657-2972658:+		[4]
Sequence	GGGATGTGCCTGCTCAGGAAACCTCTTTGCTCCACACAGCA
Motif Score	2.185083333
Cell/Tissue List	HeLa; CD34; HepG2; HEK293T; A549; U2OS; H1A; H1B; hESCs; GM12878; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_304008
mod ID: M6ASITE025668		Click to Show/Hide the Full List
mod site	chr16:2972670-2972671:+		[6]
Sequence	TCAGGAAACCTCTTTGCTCCACACAGCATGGGGCTTCAGCT
Motif Score	2.053113095
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304009
mod ID: M6ASITE025669		Click to Show/Hide the Full List
mod site	chr16:2972672-2972673:+		[7]
Sequence	AGGAAACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGC
Motif Score	2.084928571
Cell/Tissue List	HEK293T
Seq Type List	DART-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304010
mod ID: M6ASITE025671		Click to Show/Hide the Full List
mod site	chr16:2972751-2972752:+		[9]
Sequence	TCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAAA
Motif Score	2.876744048
Cell/Tissue List	CD34; HepG2; HEK293T; HeLa; A549; U2OS; hNPCs; hESCs; fibroblasts; GM12878; MT4; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_304012
mod ID: M6ASITE025672		Click to Show/Hide the Full List
mod site	chr16:2972761-2972762:+		[6]
Sequence	GGGCGTTAAGACCCTGGATGACATCAATAAAGGGACAGGAA
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T; A549
Seq Type List	MAZTER-seq; m6A-CLIP/IP
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1
External Link	RMBase: m6A_site_304013
mod ID: M6ASITE025673		Click to Show/Hide the Full List
mod site	chr16:2972775-2972776:+		[9]
Sequence	TGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCA
Motif Score	3.643047619
Cell/Tissue List	CD34; HepG2; HEK293T; HeLa; A549; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; GM12878; MT4; MM6; Huh7; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_304014
mod ID: M6ASITE025674		Click to Show/Hide the Full List
mod site	chr16:2972795-2972796:+		[7]
Sequence	ACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCT
Motif Score	2.053113095
Cell/Tissue List	HEK293T; hESC-HEK293T
Seq Type List	DART-seq; MAZTER-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_304015
mod ID: M6ASITE025676		Click to Show/Hide the Full List
mod site	chr16:2972842-2972843:+		[8]
Sequence	GTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGAC
Motif Score	2.897386905
Cell/Tissue List	HEK293T; HeLa; A549; hESC-HEK293T; U2OS; hNPCs; hESCs; fibroblasts; MT4; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	MeRIP-seq; m6A-REF-seq; MAZTER-seq; m6A-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304017
mod ID: M6ASITE025677		Click to Show/Hide the Full List
mod site	chr16:2972861-2972862:+		[10]
Sequence	GACACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGGGG
Motif Score	2.876744048
Cell/Tissue List	HEK293T; HeLa; A549; U2OS; hNPCs; hESCs; fibroblasts; MT4; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX
Seq Type List	MeRIP-seq; m6A-seq
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_304018
mod ID: M6ASITE025679		Click to Show/Hide the Full List
mod site	chr16:2972909-2972910:+		[4]
Sequence	TTTCAAGGGCGACGGGAGAGACACAGGATAAAAGGTTAAAA
Motif Score	2.897386905
Cell/Tissue List	HeLa; A549; hESC-HEK293T; U2OS; MT4; MM6; Huh7; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_304020
mod ID: M6ASITE025683		Click to Show/Hide the Full List
mod site	chr16:2972978-2972979:+		[4]
Sequence	TGGGTCTAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAG
Motif Score	2.20572619
Cell/Tissue List	HeLa; HepG2; brain; A549; MM6; Huh7; peripheral-blood; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; m6A-REF-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_304024
mod ID: M6ASITE025687		Click to Show/Hide the Full List
mod site	chr16:2973083-2973084:+		[6]
Sequence	CCTGGGAGGAGAGAGTAGTGACACTCAGGATCCAAAAGCTA
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T
Seq Type List	MAZTER-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12
External Link	RMBase: m6A_site_304028
mod ID: M6ASITE025688		Click to Show/Hide the Full List
mod site	chr16:2973127-2973128:+		[4]
Sequence	CTGCCCACCCCAGCCCCTGGACCTGCTTACCTGGGTGTGCA
Motif Score	3.622404762
Cell/Tissue List	HeLa; HepG2; A549; MM6; peripheral-blood; GSC-11; HEK293T; TREX; iSLK; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1
External Link	RMBase: m6A_site_304029
mod ID: M6ASITE025690		Click to Show/Hide the Full List
mod site	chr16:2973191-2973192:+		[4]
Sequence	TCCCCACAGTCCGGGCCAGGACAGCCTCAGGGGAGAGTGAA
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; A549; MM6; peripheral-blood; GSC-11; HEK293T; iSLK; TREX; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_304031
mod ID: M6ASITE025691		Click to Show/Hide the Full List
mod site	chr16:2973234-2973235:+		[4]
Sequence	CCTGCAGGAGGGCAGGCGAGACAAGGAGGGTGTCCAGGGCT
Motif Score	2.897386905
Cell/Tissue List	HeLa; HepG2; A549; hESC-HEK293T; MM6; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; TREX; MSC; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_304032
mod ID: M6ASITE025693		Click to Show/Hide the Full List
mod site	chr16:2973272-2973273:+		[4]
Sequence	GCTAGGGAGTGCCGGATGAAACCAGCTCTGTCCCTGTGCAG
Motif Score	2.185083333
Cell/Tissue List	HeLa; HepG2; A549; HEK293T; MM6; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1
External Link	RMBase: m6A_site_304034
mod ID: M6ASITE025695		Click to Show/Hide the Full List
mod site	chr16:2973311-2973312:+		[6]
Sequence	AGGCTCCAGGCTCCCGCCTGACAAACAGGCAGGGAGCCACA
Motif Score	2.859755952
Cell/Tissue List	hESC-HEK293T; A549
Seq Type List	MAZTER-seq; m6A-CLIP/IP
Transcript ID List	ENST00000293978.12; ENST00000572687.1; ENST00000318782.8
External Link	RMBase: m6A_site_304036
mod ID: M6ASITE025696		Click to Show/Hide the Full List
mod site	chr16:2973315-2973316:+		[4]
Sequence	TCCAGGCTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCA
Motif Score	2.20572619
Cell/Tissue List	HeLa; HepG2; A549; hESC-HEK293T; H1A; H1B; hNPCs; hESCs; MM6; Jurkat; CD4T; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000318782.8; ENST00000293978.12; ENST00000572687.1
External Link	RMBase: m6A_site_304037
mod ID: M6ASITE025697		Click to Show/Hide the Full List
mod site	chr16:2973339-2973340:+		[4]
Sequence	GCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACT
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; A549; hESC-HEK293T; H1A; H1B; hNPCs; hESCs; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; NB4
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq; m6A-CLIP/IP
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304038
mod ID: M6ASITE025698		Click to Show/Hide the Full List
mod site	chr16:2973348-2973349:+		[4]
Sequence	CACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCA
Motif Score	2.627720238
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; hESCs; GM12878; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000572687.1; ENST00000318782.8; ENST00000293978.12
External Link	RMBase: m6A_site_304039
mod ID: M6ASITE025699		Click to Show/Hide the Full List
mod site	chr16:2973377-2973378:+		[4]
Sequence	ACTCTGAAAGCAGCACTTGGACAGCCTTCAAAGTCCTTCCA
Motif Score	3.643047619
Cell/Tissue List	HeLa; HepG2; HEK293T; A549; H1A; H1B; hNPCs; hESCs; GM12878; MM6; Jurkat; peripheral-blood; GSC-11; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; HEC-1-A; GSCs; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12
External Link	RMBase: m6A_site_304040
mod ID: M6ASITE025702		Click to Show/Hide the Full List
mod site	chr16:2973436-2973437:+		[4]
Sequence	CCCCCTCTGTCCTTTTCAGAACACATGGACTTGGAGGCAGA
Motif Score	2.951386905
Cell/Tissue List	HeLa; HEK293T; A549; hESC-HEK293T; HepG2; H1A; H1B; hNPCs; hESCs; GM12878; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq; MAZTER-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12
External Link	RMBase: m6A_site_304043
mod ID: M6ASITE025703		Click to Show/Hide the Full List
mod site	chr16:2973444-2973445:+		[4]
Sequence	GTCCTTTTCAGAACACATGGACTTGGAGGCAGATTTGAAAT
Motif Score	4.065041667
Cell/Tissue List	HeLa; HEK293T; A549; HepG2; H1A; H1B; hNPCs; hESCs; GM12878; MM6; Jurkat; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial; NB4
Seq Type List	m6A-seq; MeRIP-seq
Transcript ID List	ENST00000318782.8; ENST00000572687.1; ENST00000293978.12
External Link	RMBase: m6A_site_304044
mod ID: M6ASITE025704		Click to Show/Hide the Full List
mod site	chr16:2973467-2973468:+		[4]
Sequence	TGGAGGCAGATTTGAAATAAACTTTTAGTAAATGTAAGCCT
Motif Score	2.627720238
Cell/Tissue List	HeLa; HEK293T; A549; HepG2; H1A; H1B; GM12878; MM6; HEK293A-TOA; iSLK; MSC; TIME; TREX; endometrial
Seq Type List	m6A-seq; MeRIP-seq; DART-seq
Transcript ID List	ENST00000572687.1; ENST00000293978.12; ENST00000318782.8
External Link	RMBase: m6A_site_304045

Pseudouridine (Pseudo)

In total 1 m6A sequence/site(s) in this target gene
mod ID: PSESITE000071		Click to Show/Hide the Full List
mod site	chr16:2972366-2972367:+		[11]
Sequence	AGTCTTCCTGATCTCCATCTTTCTGCCCTGCATACCAGCCC
Transcript ID List	ENST00000293978.12; ENST00000318782.8; ENST00000572687.1
External Link	RMBase: Pseudo_site_1728

Ref 1	Design, synthesis, and structure-activity relationships of macrocyclic hydroxamic acids that inhibit tumor necrosis factor alpha release in vitro and in vivo. J Med Chem. 2001 Aug 2;44(16):2636-60. doi: 10.1021/jm010127e.
Ref 2	5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m(5)C reader. Cell Res. 2017 May;27(5):606-625. doi: 10.1038/cr.2017.55. Epub 2017 Apr 18.
Ref 3	RNA m(6)A methylation regulates the epithelial mesenchymal transition of cancer cells and translation of Snail. Nat Commun. 2019 May 6;10(1):2065. doi: 10.1038/s41467-019-09865-9.
Ref 4	VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Cell Discov. 2018 Feb 27;4:10. doi: 10.1038/s41421-018-0019-0. eCollection 2018.
Ref 5	Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells. Nat Microbiol. 2016 Feb 22;1:16011. doi: 10.1038/nmicrobiol.2016.11.
Ref 6	Deciphering the "m(6)A Code" via Antibody-Independent Quantitative Profiling. Cell. 2019 Jul 25;178(3):731-747.e16. doi: 10.1016/j.cell.2019.06.013. Epub 2019 Jun 27.
Ref 7	DART-seq: an antibody-free method for global m(6)A detection. Nat Methods. 2019 Dec;16(12):1275-1280. doi: 10.1038/s41592-019-0570-0. Epub 2019 Sep 23.
Ref 8	Single-base mapping of m(6)A by an antibody-independent method. Sci Adv. 2019 Jul 3;5(7):eaax0250. doi: 10.1126/sciadv.aax0250. eCollection 2019 Jul.
Ref 9	Suppression of m(6)A reader Ythdf2 promotes hematopoietic stem cell expansion. Cell Res. 2018 Sep;28(9):904-917. doi: 10.1038/s41422-018-0072-0. Epub 2018 Jul 31.
Ref 10	Viral N(6)-methyladenosine upregulates replication and pathogenesis of human respiratory syncytial virus. Nat Commun. 2019 Oct 9;10(1):4595. doi: 10.1038/s41467-019-12504-y.
Ref 11	Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome. Nat Chem Biol. 2015 Aug;11(8):592-7. doi: 10.1038/nchembio.1836. Epub 2015 Jun 15.

m6A Target Gene Information

Cite M6AREG

Correspondence

Prof. Feng ZHU

Prof. Shuiping Liu

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