m6A Target Gene Information
General Information of the m6A Target Gene (ID: M6ATAR00735)
Full List of m6A Methylation Regulator of This Target Gene and Corresponding Disease/Drug Response(s)
hsa-miR-589-5p
can be regulated by the following regulator(s), and cause disease/drug response(s). You can browse detail information of regulator(s) or disease/drug response(s).
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Methyltransferase-like 3 (METTL3) [WRITER]
| In total 1 item(s) under this regulator | ||||
| Experiment 1 Reporting the m6A Methylation Regulator of This Target Gene | [1] | |||
| Response Summary | METTL3 up-regulated the expression of hsa-miR-589-5p and promoted the maturation of miR-589-5p. Overexpressed miR-589-5p and METTL3 promoted the viability, migration and invasion of liver cancer cells. | |||
| Target Regulation | Up regulation | |||
| Responsed Disease | Liver cancer | ICD-11: 2C12 | ||
| Pathway Response | Adherens junction | hsa04520 | ||
| Cell Process | Cell migration | |||
| Cell invasion | ||||
| In-vitro Model | THLE-2 | Normal | Homo sapiens | CVCL_3803 |
| SNU-423 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0366 | |
| SNU-387 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0250 | |
| SNU-182 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0090 | |
| SK-HEP-1 | Liver and intrahepatic bile duct epithelial neoplasm | Homo sapiens | CVCL_0525 | |
| PLC/PRF/5 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0485 | |
| Hep 3B2.1-7 | Childhood hepatocellular carcinoma | Homo sapiens | CVCL_0326 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| In-vivo Model | The mice were fed in an SPF environment (cycle of 12-h light and 12-h dark) with a free diet. All the mice were adaptively fed for 5 days before experiments and randomly divided into the following four groups: the siNC+MC group (n = 10), the METTL3 siRNA1+MC group (n = 10), siNC+M group (n = 10) and the METTL3 siRNA1+M group (n = 10). Then, the right forelimb of mice in the siNC+MC group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with siNC and MC; the right forelimb of mice in the METTL3 siRNA1+MC group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with METTL3 siRNA1 and MC; the right forelimb of mice in the siNC+M group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with siNC and M; the right forelimb of mice in the METTL3 siRNA1+M group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with METTL3 siRNA1 and M. | |||
Liver cancer [ICD-11: 2C12]
| In total 1 item(s) under this disease | ||||
| Experiment 1 Reporting the m6A-centered Disease Response | [1] | |||
| Response Summary | METTL3 up-regulated the expression of hsa-miR-589-5p and promoted the maturation of miR-589-5p. Overexpressed miR-589-5p and METTL3 promoted the viability, migration and invasion of liver cancer cells. | |||
| Responsed Disease | Liver cancer [ICD-11: 2C12] | |||
| Target Regulator | Methyltransferase-like 3 (METTL3) | WRITER | ||
| Target Regulation | Up regulation | |||
| Pathway Response | Adherens junction | hsa04520 | ||
| Cell Process | Cell migration | |||
| Cell invasion | ||||
| In-vitro Model | THLE-2 | Normal | Homo sapiens | CVCL_3803 |
| SNU-423 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0366 | |
| SNU-387 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0250 | |
| SNU-182 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0090 | |
| SK-HEP-1 | Liver and intrahepatic bile duct epithelial neoplasm | Homo sapiens | CVCL_0525 | |
| PLC/PRF/5 | Adult hepatocellular carcinoma | Homo sapiens | CVCL_0485 | |
| Hep 3B2.1-7 | Childhood hepatocellular carcinoma | Homo sapiens | CVCL_0326 | |
| HEK293T | Normal | Homo sapiens | CVCL_0063 | |
| In-vivo Model | The mice were fed in an SPF environment (cycle of 12-h light and 12-h dark) with a free diet. All the mice were adaptively fed for 5 days before experiments and randomly divided into the following four groups: the siNC+MC group (n = 10), the METTL3 siRNA1+MC group (n = 10), siNC+M group (n = 10) and the METTL3 siRNA1+M group (n = 10). Then, the right forelimb of mice in the siNC+MC group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with siNC and MC; the right forelimb of mice in the METTL3 siRNA1+MC group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with METTL3 siRNA1 and MC; the right forelimb of mice in the siNC+M group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with siNC and M; the right forelimb of mice in the METTL3 siRNA1+M group was subcutaneously injected with 100 uL PBS containing 1 × 106 SK-Hep1 cells co-transfected with METTL3 siRNA1 and M. | |||
Full List of Crosstalk(s) between m6A Modification and Epigenetic Regulation Related to This Regulator
Non-coding RNA
m6A Regulator: Methyltransferase-like 3 (METTL3)
| In total 1 item(s) under this m6A regulator | ||
| Crosstalk ID: M6ACROT05630 | ||
| Epigenetic Regulator | hsa-miR-589-5p | |
| Crosstalk relationship | m6A → ncRNA | |
| Disease | Liver cancer | |
RNA Modification Sequencing Data Associated with the Target (ID: M6ATAR00735)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: A2ISITE001856 | Click to Show/Hide the Full List | ||
| mod site | chr7:5495891-5495892:- | [2] | |
| Sequence | CCTGTGCCCAGCAGCCCCTGAGAACCACGTCTGCTCTGAGC | ||
| Transcript ID List | ENST00000415009.5; MIMAT0004799; ENST00000458142.1; ENST00000385238.1; ENST00000382368.8; ENST00000453700.7; ENST00000620087.1 | ||
| External Link | RMBase: RNA-editing_site_120804 | ||
N6-methyladenosine (m6A)
| In total 1 m6A sequence/site(s) in this target gene | |||
| mod ID: M6ASITE078511 | Click to Show/Hide the Full List | ||
| mod site | chr7:5495888-5495889:- | [3] | |
| Sequence | GTGCCCAGCAGCCCCTGAGAACCACGTCTGCTCTGAGCTGG | ||
| Motif Score | 2.930744048 | ||
| Cell/Tissue List | HeLa; H1B | ||
| Seq Type List | m6A-seq | ||
| Transcript ID List | ENST00000458142.1; ENST00000620087.1; MIMAT0004799; ENST00000415009.5; ENST00000385238.1; ENST00000453700.7; ENST00000382368.8 | ||
| External Link | RMBase: m6A_site_747002 | ||
References